RadishBase

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Alignment for radish unigene UN10611

               0      -     50
UN10611        --> .AGGAAACTATTCTTTTATTTGTCACTAATTTGTTGTTTTATTCTTTAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY947511       <-- .....................aTCACTAATTTGTTGTTTTATTCTTTAAA
FD978279       <-- ..................................................
EV535425       <-- ..................................................
FD560976       <-- ..................................................
EX750118       <-- ..................................................
FD561431       <-- ..................................................
FD973830       <-- ..................................................
EY949251       <-- ..................................................
FD550935       <-- ..................................................
FD988068       <-- ..................................................
EY938233       <-- ..................................................
EV535242       <-- ..................................................
FD963342       <-- ..................................................
EY904847       <-- ..................................................
FD576768       <-- ..................................................
FD550945       <-- ..................................................
FD546831       --> .AGGAAACTATTATTTTATTTGTCACTAATTTGTTGTTTTATTCTTTAAA
FD974554       --> .AGGAAACTATTCTTTTATTTGTCACTAATTTGTTGTTTTATTCTTTAAA
FD984017       --> cgGGAAACTATTCTTTTATTTGTCACTAATTTGTTGTTTTATTCTTTAAA
EY934414       --> .....................GTCACTAATTTGTTGTTTTATTCTTTAAA
FD565596       --> .....................GTCACTAATTTGTTGTTTTATTCTTTAAA
FD581194       --> .....................GTCACTAATTTGTTGTTTTATTCTTTAAA
EY943397       --> .....................aTCACTAATTTGTTGTTTTATTCTTTAAA
FD565266       --> ...............................................AAA
EY944648       --> .............................................aatag
EY944796       --> .............................................aatag
EV539975       --> ....................................gggaatattctttt
EV540111       --> ..................................................

               50     -    100
UN10611        --> CATTCATTCAAAAGAGTAAAGTAGCACTCGATTTTACATAAACTTTTGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY947511       <-- CATTCATTCAAAAGAGTAAAGTAGCACTCGATTTTACATAAACTTTTGAT
FD978279       <-- ..................................................
EV535425       <-- ..................................................
FD560976       <-- ..................................................
EX750118       <-- ..................................................
FD561431       <-- ..................................................
FD973830       <-- ..................................................
EY949251       <-- ..................................................
FD550935       <-- ..................................................
FD988068       <-- ..................................................
EY938233       <-- ..................................................
EV535242       <-- ..................................................
FD963342       <-- ..................................................
EY904847       <-- ..................................................
FD576768       <-- ..................................................
FD550945       <-- ..................................................
FD546831       --> CATTCATTCAAAAGAGTAAAGTAGCACTCGATTTTACATAAACTTTTGAT
FD974554       --> CATTCATTCAAAAGAGTAAAGTAGCACTCGATTTTACATAAACTTTTGAT
FD984017       --> CATTCATTCAAAAGAGTAAAGTAGCACTCGATTTTACATAAACTTTTGAT
EY934414       --> CATTCATTCAAAAGAGTAAAGTAGCACTCGATTTTACATAAACTTTTGAT
FD565596       --> CATTCATTCAAAAGAGTAAAGTAGCACTCGATTTTACATAAACTTTTGAT
FD581194       --> CATTCATTCAAAAGAGTAAAGTAGCACTCGATTTTACATAAACTTTTGAT
EY943397       --> CATTCATTCAAAAGAGTAAAGTAGCACTCGATTTTACATAAACTTTTGAT
FD565266       --> CATTCATTCAAAAGAGTAAAGTAGCACTCGATTTTACATAAACTTTTGAT
EY944648       --> tttagATTCAAAAGAGTAAAGTAGCACTCGATTTTACATAAACTTTTGAT
EY944796       --> tttagATTCAAAAGAGTAAAGTAGCACTCGATTTTACATAAACTTTTGAT
EV539975       --> atttgtcaCAAAAGAGTAAAGTAGCACTTGATTTTACATAAACTTTTGAT
EV540111       --> ...................................ACATAAACTTTTGAT

               100    -    150
UN10611        --> TGTAAAAAAAA-GAAAGCAAAAAGTTAAATATTTCTTTAGCTCATTAAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY947511       <-- TGTAAAAAAAA-GAAAGCAAAAAGTTAAATATTTCTTTAGCTCATTAAAT
FD978279       <-- ..................................................
EV535425       <-- ..................................................
FD560976       <-- ..................................................
EX750118       <-- ..................................................
FD561431       <-- ..................................................
FD973830       <-- ..................................................
EY949251       <-- ..................................................
FD550935       <-- ..................................................
FD988068       <-- ..................................................
EY938233       <-- ..................................................
EV535242       <-- ..................................................
FD963342       <-- ..................................................
EY904847       <-- ..................................................
FD576768       <-- ..................................................
FD550945       <-- ..................................................
FD546831       --> TG-AAAAAAAA-GAAAGCAAAGAGTTAAATATTTCTTTAGCTCATTAAAT
FD974554       --> TGAAAAAAAAA-GAAAGCAAAGAGTTAAATATTTCTTTAGGTCATTAAAT
FD984017       --> TGAAAAAAAAAAGAAAGCAAAGAGTTAAATATTTCTTTAGCTCATTAAAT
EY934414       --> TGTAAAAAAA--GAAAGCAAAAAGTTAAATATTTCTTTAGCTCATTAAAT
FD565596       --> TGAAAAAAAAA-GAAAGCAAAAAGTTAAATATTTCTTTAGCTCATTAAAT
FD581194       --> TGTAAAAAAAA-GAAAGCAAAAAGTTAAATATTTCTTTAGCTCATTAAAT
EY943397       --> TGTAAAAAAAA-GAAAGCAAAAAGTTAAATATTTCTTTAGCTCATTAAAT
FD565266       --> TG-AAAAAAAA-GAAAGCAAAAAGTTAAATATTTCTTTAGCTCATTAAAT
EY944648       --> TGTAAAAAAAA-GAAAGCAAAAAGTTAAATATTTCTTTAGCTCATTAAAT
EY944796       --> TGTAAAAAAAA-GAAAGCAAAAAGTTAAATATTTCTTTAGCTCATTAAAT
EV539975       --> TG-AAAAAAAA-GAAAGCAAAAAGTTAAATATTTCTTTAGCTCATTAAAT
EV540111       --> TG-AAAAAAAA-GAAAGCAAAAAGTTAAATATTTCTTTAGCTCATTAAAT

               150    -    200
UN10611        --> ATTCCGGACGGGCTCGGCAATAAACGGGTAAAACTCAAGCCTAAAATTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY947511       <-- ATTCCGGACGGGATCGGCAATAAACGGGTAAAACTCAAGCCTAAAATTAC
FD978279       <-- .................................CTCAAGCCTAAAATTAC
EV535425       <-- ............................................AATTAC
FD560976       <-- ............................................AATTAC
EX750118       <-- .............................................ATTAC
FD561431       <-- ..................................................
FD973830       <-- ..................................................
EY949251       <-- ..................................................
FD550935       <-- ..................................................
FD988068       <-- ..................................................
EY938233       <-- ..................................................
EV535242       <-- ..................................................
FD963342       <-- ..................................................
EY904847       <-- ..................................................
FD576768       <-- ..................................................
FD550945       <-- ..................................................
FD546831       --> ATTCCGGACGGGCTCGGCAATAAACGGGTAAAACTCAAGCCTAAAATTAC
FD974554       --> ATTCCGGACGGGCTCGGCAATAAACGGGTAAAACTCAAGCCTAAAATTAC
FD984017       --> ATTCCGGACGGGCTCGGCAATAAACGGGTAAAACTCAAGCCTAAAATTAC
EY934414       --> ATTCCGGACGGGCTCGGCAATAAACGGGTAAAACTCAAGCCTAAAATTAC
FD565596       --> ATTCCGGACGGGCTCGGCAATAAACGGGTAAAACTCAAGCCTAAAATTAC
FD581194       --> ATTCCGGACGGGCTCGGCAATAAACGGGTAAAACTCAAGCCTAAAATTAC
EY943397       --> ATTCCGGACGGGATCGGCAATAAACGGGTAAAACTCAAGCCTAAAATTAC
FD565266       --> ATTCCGGACGGGCTCGGCAATAAACGGGTAAAACTCAAGCCTAAAATTAC
EY944648       --> ATTCCGGACGGGCTCGGCAATAAACGGGTAAAACTCAAGCCTAAAATTAC
EY944796       --> ATTCCGGACGGGCTCGGCAATAAGCGGGTAAAACTCAAGCCTAAAATTAC
EV539975       --> ATTCCGGACGGGCTCGGCAATAAACGGGTAAAACTCAAGCCTAAAATTAC
EV540111       --> ATTCCGGACGGGCTCGGCAATAAACGGGTAAAACTCAAGCCTAAAATTAC

               200    -    250
UN10611        --> AGCTCAAACCTACAACTCTCCCTCCTCGTCTAGTATTCAGGCAATCTTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY947511       <-- AGCTCAAACCTACAACTCTCCCTCCTCGTCTAGTATTCAGGCAATCTTGA
FD978279       <-- AGCTCAAAC-TACAACTCTCCCTCCTCGTCTAGTAT-CAGGCAATCTTGA
EV535425       <-- AGCTCAAACCTACAACTCTCCCTCCTCGTCTAGTATTCAGGCAATCTTGA
FD560976       <-- AGCTCAA-CCTACAACTCTCCCTCCTCGTCTAGTATTCAGGCGATCTTGA
EX750118       <-- AGCTCAAAC-TACAACTCTCCCTCCTCGTCTAGTATTCAGGCAATCTTGA
FD561431       <-- ............CAACTCTCCCTCCTCGTCTAGTATTCAGGCAATCTTGA
FD973830       <-- .............AACTCTCCCTCCTCGTCTAGTAT-CAGGCA-TC-TGA
EY949251       <-- ............................TCTAGTAT-CAGGCAATCT-GA
FD550935       <-- .............................CTAGTAT-CAGGCAATCTTGA
FD988068       <-- ...............................AGTATTCAGGCAATCTTGA
EY938233       <-- ..................................................
EV535242       <-- ..................................................
FD963342       <-- ..................................................
EY904847       <-- ..................................................
FD576768       <-- ..................................................
FD550945       <-- ..................................................
FD546831       --> AGCTCAAACCTACAACTCTCCCTCCTCGTCTAGTATTCAGGCAATCTTGA
FD974554       --> AGCTCAAACCTACAACTCTCCCTCCTCGTCTAGTATTCAGGCAATCTTGA
FD984017       --> AGCTCAAACCTACAACTCTCCCTCCTCGTCTAGTATTCAGGCAATCTTGA
EY934414       --> AGCTCAAACCTACAACTCTCCCTCCTCGTCTAGTATTCAGGCAATCTTGA
FD565596       --> AGCTCAAACCTACAACTCTCCCTCCTCGTCTAGTATTCAGGCAATCTTGA
FD581194       --> AGCTCAAACCTACAACTCTCCCTCCTCGTCTAGTATTCAGGCAATCTTGA
EY943397       --> AGCTCAAACCTACAACTCTCCCTCCTCGTCTAGTATTCAGGCAATCTTGA
FD565266       --> AGCTCAAACCTACAACTCTCCCTCCTCGTCTAGTATTCAGGCGATCTTGA
EY944648       --> AGCTCAAACCTACAACTCTCCCTCCTCGTCTAGTATTCAGGCAATCGTGA
EY944796       --> AGCTCAAACCTACAACTCTCCCTCCTCGTCTAGTATTCAGGCAATCTTGA
EV539975       --> AGCTCAAACCTACAACTCTCCCTCCTCGTCTAGTATTCAGGCAATCTTGA
EV540111       --> AGCTCAAACCTACAACTCTCCCTCCTCGTCTAGTATTCAGGCAATCTTGA

               250    -    300
UN10611        --> AAATGCAAGCTATTAAACGACACACACTCCTCACAAGCTTTTGGCGATAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY947511       <-- AAATGCAAGCTATTAAACGACACACACTCCTCACAAGCTTTTGGCGATAA  Raphanus sativus cv Rat-Tail Radish #3870
FD978279       <-- AAATGCAAGCTATTAAACGACGCACACTCCTCACAAGCTTTTGGCGATAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV535425       <-- AAATGCAAGCTAGTAAACGACACACACTCCTCACAAGCTTTTGGCGATAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD560976       <-- AAATGCAAGCTATTAAACGACACACACTCCTCACAAGCTTT-GGCGATAA  Raphanus sativus var. oleiformis
EX750118       <-- AAATGCAAGCTATTAAACGACACACACTCCTCACAAGCTTTTGGCGATAA  Raphanus raphanistrum subsp. maritimus
FD561431       <-- AAATGCAAGCTATTAAACGACGCACACTCCTCACAAGCTTTTGGCGATAA  Raphanus sativus var. oleiformis
FD973830       <-- AAATGCAAGCTAGTAAACGACACACACTCCTCACAAGCTTT-GGCGATAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY949251       <-- AAATGCAAGCTAT-AAACGACACACACTCCTCACAAGCTTT-GGCGATAA  Raphanus sativus cv Rat-Tail Radish #3870
FD550935       <-- AAATGCAAGCTAGTAAACGACACACACTCCTCACAAGCTTTTGGCGATAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD988068       <-- AAATGCAAGCTAT-AAACGACACACACTCCTCACAAGCTTTTGGCGATAA  Raphanus raphanistrum subsp. landra
EY938233       <-- ....GCAAGCTAT-AAACGACACACACTC-TCACAAGCTTT-GGCGATAA  Raphanus sativus cv Early Scarlet Globe
EV535242       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD963342       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY904847       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD576768       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD550945       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD546831       --> AAATGCAAGCTAGTAAACGACACACACTCCTCACAAGCTTTTGGCGATAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD974554       --> AAATGCAAGCTATTAAACGACGCACACTCCTCACAAGCTTTTGGCGATAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD984017       --> AAATGCAAGCTATTAAACGACACACACTCCTCACAAGCTTTTGGCGATAA  Raphanus raphanistrum subsp. landra
EY934414       --> AAATGCAAGCTATTAAACGACACACACTCCTCACAAGCTTTTGGCGATAA  Raphanus sativus cv Early Scarlet Globe
FD565596       --> AAATGCAAGCTATTAAACGACGCACACTCCTCACAAGCTTTTGGCGATAA  Raphanus sativus var. oleiformis
FD581194       --> AAATGCAAGCTATTAAACGACACACACTCCTCACAAGCTTTTGGCGATAA  Raphanus sativus cv Rat-Tail Radish #3870
EY943397       --> AAATGCAAGCTATTAAACGACACACACTCCTCACAAGCTTTTGGCGATAA  Raphanus sativus cv Rat-Tail Radish #3870
FD565266       --> AAATGCAAGCTATTAAACGACACACACTCCTCACAAGCTTTTGGCGATAA  Raphanus sativus var. oleiformis
EY944648       --> AAATGCAAGCTATTAAACGACACACACTCCTCACAAGCTTTTGGCGATAA  Raphanus sativus cv Rat-Tail Radish #3870
EY944796       --> AAATGCAAGCTATTAAACGACACACACTCCTCACAAGCTTTTGGCGATAA  Raphanus sativus cv Rat-Tail Radish #3870
EV539975       --> AAATGCAAGCTAGTAAACGACACACACTCCTCACAAGCTTTTGGCGATAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV540111       --> AAATGCAAGCTAGTAAACGACACACACTCCTCACAAGCTTTTGGCGATAA  Raphanus raphanistrum subsp. raphanistrum (MS)

               300    -    350
UN10611        --> GCCTTTCGTACACTGCACCATTCCATACAGCATATCACCCTTGTACCGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY947511       <-- GCCTTTCGTACACTGCACCATTCCATACAGCATATCACCCTTGTACCGAG
FD978279       <-- GC-TTTCGTACACTGCACCATTCCATACAGCATATCACCCTTGTACCGAG
EV535425       <-- GCCTTTCGTACACTGCACCATTCCATACAGCATATCACCCTTGTACCGAG
FD560976       <-- GCCTTTCGTACACTGCACCATTCCATACAGCATATCACCCTTGTACCGAG
EX750118       <-- GCCTTTCGTACACTGCACCATTCCATACAGCATATCACCCTTGTACCGAG
FD561431       <-- GCCTTTCGTACACTGCACCATTCCATACAGCATATCACCCTTGTACCGAG
FD973830       <-- GC-TTTCGTACACTGCACCATTCCATACAGCATATCACCTTTGTACCGAG
EY949251       <-- GC-TTTCGTACACTGCACCATTCCATACAGCATATCACCCTTGTACCGAG
FD550935       <-- GC-TTTCGTACACTGCACCATTCCATACAGCATATCACCCTTGTACCGAG
FD988068       <-- GC-TTTCGTACACTGCACCATTCCATACAGCATATCACCCTTGTACCGAG
EY938233       <-- GC-TTTCGTACACTGCACCACTCCATACAGCATATCACCCTTGTACCGAG
EV535242       <-- .......................CATACAGCATATCACCCTTGTACCGAG
FD963342       <-- .......................CATACAGCATATCACCCTTGTACCGAG
EY904847       <-- ..................................................
FD576768       <-- ..................................................
FD550945       <-- ..................................................
FD546831       --> GCCTTTCGTACACTGCACCATTCCATACAGCATATCACCCTTGTACCGAG
FD974554       --> GCCTTTCGTACACTGCACCATTCCATACAGCATATCACCCTTGTACCGAG
FD984017       --> GCCTTTCGTACACTGCACCATTCCATACAGCATATCACCCTTGTACCGAG
EY934414       --> GCCTTTCGTACACTGCACCACTCCATACAGCATATCACCCTTGTACCGAG
FD565596       --> GCCTTTCGTACACTGCACCATTCCATACAGCATATCACCCTTGTACCGAG
FD581194       --> GCCTTTCGTACACTGCACCATTCCATACAGCATATCACCCTTGTACCGAG
EY943397       --> GCCTTTCGTACACTGCACCATTCCATACAGCATATCACCCTTGTACCGAG
FD565266       --> GCCTTTCGTACACTGCACCATTCCATACAGCATATCACCCTTGTACCGAG
EY944648       --> GCCTTTCGTACACTGCACCATTCCATACAGCATATCACCCTTGTACCGAG
EY944796       --> GCCTTTCGTACACTGCACCATTCCATACAGCATATCACCCTTGTACCGAG
EV539975       --> GCCTTTCGTACACTGCACCATTCCATACAGCATATCACCCTTGTACCGAG
EV540111       --> GCCTTTCGTACACTGCACCATTCCATACAGCATATCACCCTTGTACCGAG

               350    -    400
UN10611        --> TCTCTCCCACAGAGTACAGTGTGTAATTATCTCCACTGGTGGCAAAAGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY947511       <-- TCTCTCCCACAGAGTACAGTGTGTAATTATCTCCACTGGTGGCAAAAGTC
FD978279       <-- TCTCTCCCACAGAGTACAGTGTGTAATTATCTCCACTGGTGGCAAAAGTC
EV535425       <-- TCTCTCCCACAGAGTACAGTGTGTAATTATCTCCACTGGTGGCAAAAGTC
FD560976       <-- TCTCTCCCACAGAGTACAGTGTGTAATTATCTCCACTGGTGGCAAAAGTC
EX750118       <-- TCTCTCCCACAGAGTACAGTGTGTAATTATCTCCACTGGTGGCAAAAGTC
FD561431       <-- TCTCTCCCACAGAGTACAGTGTGTAATTATCTCCACTGGTGGCAAAAGTC
FD973830       <-- TCTCTCCCACAGAGTACAGTGTGTAATTATCTCCACTGGTGGCAAAAGTC
EY949251       <-- TCTCTCCCACAGAGTACAGTGTGTAATTATCTCCACTGGTGGCAAATGTC
FD550935       <-- TCTCTCCCACAGAGTACAGTGTGTAATTATCTCCACTGGTGGCAAAAGTC
FD988068       <-- TCTCTCCCACAGAGTACAGTGTGTAATTATCTCCACTGGTGGCAAAAGTC
EY938233       <-- TCTCTCCCACAGAGTACAGTGTGTAATTATCTCCACTGGTGGCAAAAGTC
EV535242       <-- TCTCTCCCACAGAGTACAGTGTGTAATTATCTCCACTGGTGGCAAAAGTC
FD963342       <-- TCTCT-ACACAGAGTACAGTGTGTAATTATCTCCACTGGTGGCAAAAGTC
EY904847       <-- ..................................................
FD576768       <-- ..................................................
FD550945       <-- ..................................................
FD546831       --> TCTCTCCCACAGAGTACAGTGTGTAATTATCTCCACTGGTGGCAAAAGTC
FD974554       --> TCTCTCCCACAGAGTACAGTGTGTAATTATCTCCACTGGTGGCAAAAGTC
FD984017       --> TCTCTCCCACAGAGTACAGTGTGTAATTATCTCCACTGGTGGCAAAAGTC
EY934414       --> TCTCTCCCACAGAGTACAGTGTGTAATTATCTCCACTGGTGGCAAAAGTC
FD565596       --> TCTCTCCCACAGAGTACAGTGTGTAATTATCTCCACTGGTGGCAAAAGTC
FD581194       --> TCTCTCCCACAGAGTACAGTGTGTAATTATATCCACTGGTGGTAAAAGTC
EY943397       --> TCTCTCCCACAGAGTACAGTGTGTAATTATCTCCACTGGTGGCAAAAGTC
FD565266       --> TCTCTCCCACAGAGTACAGTGTGTAATTATCTCCACTGGTGGCAAAAGTC
EY944648       --> TCTCTCCCACAGAGTACAGTGTGTAATTATCTCCACTGGTGGCAAAAGTC
EY944796       --> TCTCTCCCACAGAGTACAGTGTGTAATTATCTCCACTGGTGGCAAATGTC
EV539975       --> TCTCTCCCACAGAGTACAGTGTGTAATTATCTCCACTGGTGGCAAAAGTC
EV540111       --> TCTCTCCCACAGAGTACAGTGTGTAATTATCTCCACTGGTGGCAAAAGTC

               400    -    450
UN10611        --> GTCAGATCTTGAATAAGATTATTCCAAGCAATTATAAACGAGCCTATATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY947511       <-- GTCAGATCTTGAATAAGATTATTCCAAGCAATTATAAACGAGCCTATATC
FD978279       <-- GTCAGATCTTGAATAAGATTATTCCAAGCAATTATAAACGAGCCTATATC
EV535425       <-- GTCAGATCTTGAATAAGATTATTCCAAGCAATTATAAACGAGCCTATATC
FD560976       <-- GTCAGATCTTGAATAAGATTATTCCAAGCAATTATAAACGAGCCTATATC
EX750118       <-- GTCGGATCTTGAATAAGATTATTCCAAGCAATTATAAACGAGCCTATATC
FD561431       <-- GTCAGATCTTGAATAAGATTATTCCAAGCAATTATAAACGAGCCTATATC
FD973830       <-- GTCAGATCTTGAATAAGATTATTCCAAGCAATTATAAACGAGCCTATATC
EY949251       <-- GTCAGATCTTGAATAAGATTATTCCAAGCAATTATAAACGAGCCTATATC
FD550935       <-- GTCAGATCTTGAATAAGATTATTCCAAGCAATTATAAACGAGCCTATATC
FD988068       <-- GTCAGATATTGAATAAGATTATTCCAAGCAATTATAAACGAGCCTATATC
EY938233       <-- GTCAGATCTTGAATAAGATTATTCCAAGCAATTATAAACGAGCCTATATC
EV535242       <-- GTCAGATCTTGAATAAGATTATTCCAAGCAATTATAAACGAGCCTATATC
FD963342       <-- GTCAGATCTTGAATAAGATTATTCCAAGCAATTATAAACGAGCCTATATC
EY904847       <-- ..................................................
FD576768       <-- ..................................................
FD550945       <-- ..................................................
FD546831       --> GTCAGATCTTGAATAAGATTATTCCAAGCAATTATAAACGAGCCTATATC
FD974554       --> GTCAGATCTTGAATAAGATTATTCCAAGCAATTATAAACGAGCCTATATC
FD984017       --> GTCAGATATTGAATAAGATTATTCCAAGCAATTATAAACGAGCCTATATC
EY934414       --> GTCAGATCTTGAATAAGATTATTCCAAGCAATTATAAACGAGCCTATATC
FD565596       --> GTCAGATCTTGAATAAGATTATTCCAAGCAATTATAAACGAGCCTATATC
FD581194       --> GTCAGATCTTGAATAAGATTATTCCAAGCAATTATAAACGAGCCTATATC
EY943397       --> GTCAGATCTTGAATAAGATTATTCCAAGCAATTATAAACGAGCCTATATC
FD565266       --> GTCAGATCTTGAATAAGATTATTCCAAGCAATTATAAACGAGCCTATATC
EY944648       --> GTCAGATCTTGAATAAGATTATTCCAAGCAATTATAAACGAGCCTATATC
EY944796       --> GTCAGATCTTGAATAAGATTATTCCAAGCAATTATAAACGAGCCTATATC
EV539975       --> GTCAGATCTTGAATAAGATTATTCCAAGCAATTATAAACGAGCCTATATC
EV540111       --> GTCAGATCTTGAATAAGATTATTCCAAGCAATTATAAACGAGCCTATATC

               450    -    500
UN10611        --> TCCTCCCACCTTCTTCGCGTTGGACATACAAAAGTTATTGTCGTAATCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY947511       <-- TCCTCCCACCTTCTTCGCGTTGGACATACAAAAGTTATTGTCGTAATCGA  Raphanus sativus cv Rat-Tail Radish #3870
FD978279       <-- TCCTCCCACCTTCTTCGCGTTGGACATACAAAAGTTATTGTCGTAATCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV535425       <-- TCCTCCCACCTTCTTCGCGTTGGACATACAAAAGTTATTGTCGTAATCTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD560976       <-- TCCTCCCACCTTCTTCGCGTTGGACATACAAAAGTTATTGTCGTAATCGA  Raphanus sativus var. oleiformis
EX750118       <-- TCCTCCCACCTTCTTCGCGTTGGACATACAAAAGTTATTGTCGTAATCGA  Raphanus raphanistrum subsp. maritimus
FD561431       <-- TCCTCCCACCTTCTTCGCGTTGGAC--ACAAAAGTTATTGTCGTAATCGA  Raphanus sativus var. oleiformis
FD973830       <-- TCCTCCCACCTTCTTCGCGTTGGACATACAAAAGTTATTGTCGTAATCTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY949251       <-- TCCTCCCACCTTCTTCGCGTTGGACATACAAAAGTTATTGTCGTAATCGA  Raphanus sativus cv Rat-Tail Radish #3870
FD550935       <-- TCCTCCCACCTTCTTCGCGTTGGACATACAAAAGTTATTGTCGTAATCTA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD988068       <-- TCCTCCCACCTTCTTCGCGTTGGACATACAAAAGTTATTGTCGTAATCGA  Raphanus raphanistrum subsp. landra
EY938233       <-- TCCTCCCACCTTCTTCGCGTTGGACATACAAAAGTTATTGTCGTAATCGA  Raphanus sativus cv Early Scarlet Globe
EV535242       <-- TCCTCCCACCTTCTTCGCGTTGGACATACAAAAGTTATTGTCGTAATCTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD963342       <-- TCCTCCCACCTTCTTCGCGTTGGACATACAAAAGTTATTGTCGTAATCGA  Raphanus raphanistrum subsp. maritimus
EY904847       <-- .............TTCGCGTTGGACATACAAAAGTTATTGTCGTAATCTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD576768       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD550945       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD546831       --> TCCTCCCACCTTCTTCGCGTTGGACATACAAAAGTTATTGTCGTAATCTA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD974554       --> TCCTCCCACCTTCTTCGCGTTGGACATACAAAAGTTATTGTCGTAATCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD984017       --> TCCTCCCACCTTCTTCGCGTTGGACATACAAAAGTTATTGTCGTAATCGA  Raphanus raphanistrum subsp. landra
EY934414       --> TCCTCCCACCTTCTTCGCGTTGGACATACAAAAGTTATTGTCGTAATCGA  Raphanus sativus cv Early Scarlet Globe
FD565596       --> TCCTCCCACCTTCTTCGCGTTGGACA--CAAAAGTTATTGTCGTAATCGA  Raphanus sativus var. oleiformis
FD581194       --> TCCTCCCACTTTCTTCGCGTTGGACATACAAAAGTTATTGTCGTAATCGA  Raphanus sativus cv Rat-Tail Radish #3870
EY943397       --> TCCTCCCACCTTCTTCGCGTTGGACATACAAAAGTTATTGTCGTAATCGA  Raphanus sativus cv Rat-Tail Radish #3870
FD565266       --> TCCTCCCACCTTCTTCGCGTTGGACATACAAAAGTTATTGTCGTAATCGA  Raphanus sativus var. oleiformis
EY944648       --> TCCTCCCACCTTCTTCGCGTTGGACATACAAAAGTTATTGTCGTAATCGA  Raphanus sativus cv Rat-Tail Radish #3870
EY944796       --> TCCTCCCACCTTCTTCGCGTTGGACATACAAAAGTTATTGTCGTAATCGA  Raphanus sativus cv Rat-Tail Radish #3870
EV539975       --> TCCTCCCACCTTCTTCGCGTTGGACATACAAAAGTTATTGTCGTAATCTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV540111       --> TCCTCCCACCTTCTTCGCGTTGGACATACAAAAGTTATTGTCGTAATCTA  Raphanus raphanistrum subsp. raphanistrum (MS)

               500    -    550
UN10611        --> TCTTCCCAATAGTATTGAAGGTTGAAATCGCGAGAAGACACTGATCATAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY947511       <-- TCTTCCCAATAGTATTGAAGGTTGAAATCGCGAGAAGACACTGATCATAC
FD978279       <-- TCTTCCCAATAGTATTGAAGGTTGAAATCGCGAGAAGACACTGATCATAC
EV535425       <-- TCTTCCCAATAGTATTGAAGGTTGAAATCGCGAGAGGACAGTGATCATAC
FD560976       <-- TCTTCCCAATAGTATTGAAGGTTGAAATCGCGAGAAGACACTGATCATAC
EX750118       <-- TCTTCCCAATAGTATTGAAGGTTGAAATCGCGAGAAGACACTGATCATAC
FD561431       <-- TCTTCCTAATAGTATTGAAGGTTGAAATCGCGAGAAGACACTGATCATAC
FD973830       <-- TCTTCCCAATAGTATTGAAGGTTGAAATCGCGAGAAGACACTGATCACAC
EY949251       <-- TCTTCCCAATAGTATTGAAGGTTGAAATCGCGAGAAGACACTGATCATAC
FD550935       <-- TCTTCCCAATAGTATTGAAGGTTGAAATCGCGAGAAGACACTGATCATAC
FD988068       <-- TCTTCCCAATAGTATTGAAGGTTGAAATCGCGAGAAGACACTGATCATAC
EY938233       <-- TCTTCCCAATAGTATTGAAGGTTGAAATCGCGAGAAGACACTGATCATAC
EV535242       <-- TTTTCCCAATAGTATTGAAGGTTGAAATCGCGAGAGGACAGTGATCATAC
FD963342       <-- TCTTCCCAATAGTATTGAAGGTTGAAATCGCGAGAAGACACTGATCATAC
EY904847       <-- TCTTCCCAATAGTATTGAAGGTTGAAATCGCGAGAAGACACTGATCATAC
FD576768       <-- ..................................................
FD550945       <-- ..................................................
FD546831       --> TCTTCCCAATAGTATTGAAGGTTGAAATCGCGAGAAGACACTGATCATAC
FD974554       --> TCTTCCCA..........................................
FD984017       --> TCTTCCCAATAGTATTGAAGGTTGAAATCGCGAGAAGACACTGATCATAC
EY934414       --> TCTTCCCAATAGTATTGAAGGTTGAAATCGCGAGAAGACACTGATCATAC
FD565596       --> TCTTCCTAATAGTATTGAAGGTTGAAATCGCGAGAAGACACTGATCATAC
FD581194       --> TCTTCCCAATAGTATTGAAGGTTGAAATCGCGAGAAGACACTGATCATAC
EY943397       --> TCTTCCCAATAGTATTGAAGGTTGAAATCGCGAGAAGACACTGATCATAC
FD565266       --> TCTTCCCAATAGTATTGAAGGTTGAAATCGCGAGAAGACACTGATCATAC
EY944648       --> TCTTCCCAATAGTATTGAAGGTTGAAATCGCGAGAAGACACTGATCATAC
EY944796       --> TCTTCCCAATAGTATTGAAGGTTGAAATCGCGAGAAGACACTGATCATAC
EV539975       --> TTTTCCCAATAGTATTGAAGGTTGAAATCGCGAGAGGACAGTGATCATAC
EV540111       --> TCTTCCCAATAGTATTGAAGGTTGAAATCGCGAGAGGACAGTGATCATAC

               550    -    600
UN10611        --> CATATTATCCTCCCCTTGTACCAAGGACATCGCCTACCAAGCGCAGAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY947511       <-- CATATTATCCTCCCC...................................
FD978279       <-- CATATTATCCTCCCCTTGTACCAAGGACATCGCCTACCAAGCGCAGAGAG
EV535425       <-- CATATTATCCTCCCCTTGTACCAGGGACATCGCCTACCAAGCGCAGAGAG
FD560976       <-- CATATTATCCTCCCCTTGTACCAAGGACATCGCCTACCAAGCGCAGAGAG
EX750118       <-- CATATTATCCTCCCCTTGTACCAAGGACATCGCCTACCAAGCGCAGAGAG
FD561431       <-- CATATTATCCTCCCCTTGTACCAAGGACATCGCCTACCAAGCGCAGAGAG
FD973830       <-- CATATTATCCTCCCCTTGTACCAAGGACATCGCCTACCAAGCGCAGAGAG
EY949251       <-- CATATTATCCTCCCCTTGTACCAAGGACATCGCCTACCAAGCGCAGAGAG
FD550935       <-- CATATTATCCTCCCCTTGTACCAAGGACATCGCCTACCAAGCGCAGAGAG
FD988068       <-- CATATTATCCTCCC-TTGTACCAAGGACATCGCCTACCAAGCGCAGAGAG
EY938233       <-- CATATTATCCTCCCCTTGTACCAAGGACATCGCCTACCAAGCGCAGAGAG
EV535242       <-- CATATTATCCTCCCCTTGTACCAAGGACATCGCCTACCAAGCGCAGAGAG
FD963342       <-- CATATTATCCTCCCCTTGTACCAAGGACATCGCCTACCAAGCGCAGAGAG
EY904847       <-- CATATTATCCTCCCCTTGTACCAAGGACATCGCCTACCAAGCGCAGAGAG
FD576768       <-- ..................................................
FD550945       <-- ..................................................
FD546831       --> CATATTATCCTCCCCTTGTACCAAGGACATCGCCTACCAAGCGCAGAGAG
FD974554       --> ..................................................
FD984017       --> CATATTATCCTCCC-TTGTACCAAGGACATCGCCTACCAAGCGCAGAGAG
EY934414       --> CATATTATCCTCCCCTTGTACCAAGGACATCGCCTACCAAGCGCAGAGAG
FD565596       --> CATATTATCCTCCCCTTGTACCAAGGACATCGCCTACCAAGCGCAGAGAG
FD581194       --> CATATTATCCTCCCCTTGTACCAAGGACATCGCCTACCAAGCGCAGA...
EY943397       --> CATATTATCCTCCCC...................................
FD565266       --> CATATTATCCTCCCCTTGTACCAAGGACATCGCCTACCAAGCGCAGAGAG
EY944648       --> CATATTATCCTCCCCTTGTACCAAGGACATCGCCTACCAAGCtgtaatat
EY944796       --> CATATTATCCTCCCCTTGTACCAAGGACATCGCCTACCAAGCGCAGAGAG
EV539975       --> CATATTATCCTCCCCTTGTACCAAGGACATCGCCTACCAAGCGCAGAGAG
EV540111       --> CATATTATCCTCCCCTTGTACCAGGGACATCGCCTACCAAGCGCAGAGAG

               600    -    650
UN10611        --> TGCAGTGGCAAAGCAGTCATGGCACTTGGGCCCGTAGGAGTCGCCGCGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY947511       <-- ..................................................
FD978279       <-- TGCAGTGGCAAAGCAGTCATGGCACTTGGGCCCATATGAGTCGCCGCGGC
EV535425       <-- TGCAGTGGCAAAGCAGTCATGGCACTTGGGCCCGTAGGAGTCGCCGCGGC
FD560976       <-- TGCGGTGGCAAAGCAGTCATGGCACTTGGGCCCGTAGGAGTCGCCGCGGC
EX750118       <-- TGCAGTGGCAAAGCAGTCATGGCACTTGGGCCCGTAGGAGTCGCCGCGGC
FD561431       <-- TGCGGTGGCAAAGCAGTCATGGCACTTGGGCCCGTAGGAGTCGCCGCGGC
FD973830       <-- TGCAGTGGCAAAGCAGTCATGGCACTTGGGCCCATAGGAGTCGCCGCGGC
EY949251       <-- TGCAGTGGCAAAGCAGTCATGGCACTTGGGCCCGTAGGAGTCGCCGCGGC
FD550935       <-- TGCAGTGGCAAAGCAGTCATGGCACTTGGGCCCGTAGGAGTCGCCGCGGC
FD988068       <-- TGCAGTGGCAAAGCAGTCATGGCACTTGGGCCCGTAGGAGTCGCCGCGGC
EY938233       <-- TGCAGTGGCAAAGCAGTCATGGCACTTGGGCCCGTAGGAGTCGCCGCGGC
EV535242       <-- TGCAGTGGCAAAGCAGTCATGGCACTTGGGCCCGTAGGAGTCGCCGCGGC
FD963342       <-- TGCAGTGGCAAAGCAGTCATGGCACTTGGGCCCGTAGGAGTCGACGCGGC
EY904847       <-- TGCAGTGGCAAAGCAGTCATGGCACTTGGGCCCATAGGAGTCGCCGCGGC
FD576768       <-- ..................................................
FD550945       <-- ..................................................
FD546831       --> TGCAGTGGCAAAGCAGTCATGGCACTTGGGCCCGTAGGAGTCGCCGCGGC
FD974554       --> ..................................................
FD984017       --> TGCAGTGGCAAAGCAGTCATGGCACTTGGGCCCGTAGGAGTCGCCGCGGC
EY934414       --> TGCAGTGGCAAAGCAGTCATGGCACTTGGGCCCGTAGGAGTCGCCGCGGC
FD565596       --> TGCGGTGGCAAAGCAGTCATGGCACTTGGGCCCGTAGGAGTCGCCGCGGC
FD581194       --> ..................................................
EY943397       --> ..................................................
FD565266       --> TGCGGTGGCAAAGCAGTCATGGCACTTGGGCCCGTAGGAGTCGCCGCGGC
EY944648       --> a.................................................
EY944796       --> TGCAGTGGCAAAGCAGTCATGGCACTTGGGCCCGTAGGAGTCGCCGCGGC
EV539975       --> TGCAGTGGCAAAGCAGTCATGGCACTTGGGCCCGTAGGAGTCGCCGCGGC
EV540111       --> TGCAGTGGCAAAGCAGTCATGGCACTTGGGCCCGTAGGAGTCGCCGCGGC

               650    -    700
UN10611        --> ACTGGAGGATAGCGGAAAAAGTGGGATCGCCGATCCCGTCATAACCTCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY947511       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD978279       <-- ACTGGAGGATAGCGGAAAAAGTGGGATCGCCGATCCCGTCATAACCTCTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV535425       <-- ACTGGAGGATAGCGGAAAAAGTGGGATCGCCGATCCCGTCATAACCTCTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD560976       <-- ACTGGAGGATAGCGGAAAAAGTGGGATCGCCGATCCCGTCATAACCTCTG  Raphanus sativus var. oleiformis
EX750118       <-- ACTGGAGGATAGCGGAAAAAGTGGGATCGCCGATCCCGTCATAACCTCTG  Raphanus raphanistrum subsp. maritimus
FD561431       <-- ACTGGAGGATAGCGGAAAAAGTGGGATCGCCGATCCCGTCATAACCTCTG  Raphanus sativus var. oleiformis
FD973830       <-- ACTGGAGGATAGCGGAAAAAGTGGGATCGCCGATCCCGTCATAACCTCTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY949251       <-- ACTGGAGGATAGCGGAAAAAGTGGGATCGCCGATCCCGTCATAACCTTTG  Raphanus sativus cv Rat-Tail Radish #3870
FD550935       <-- ACTGGAGGATAGCGGAAAAAGTGGGATCGCCGATCCCGTCATAACCTCTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD988068       <-- ACTGGAGGATAGCGGAAAAAGTGGGATCGCCGATCCCATCATAACCTCTG  Raphanus raphanistrum subsp. landra
EY938233       <-- ACTGGAGGATAGCGGAAAAAGTGGGATCGCCGATCCCGTCGTAACCTTTG  Raphanus sativus cv Early Scarlet Globe
EV535242       <-- ACTGGAGGATAGCGGAAAAAGTGGGATCGCCGATCCCGTCATAACCTCTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD963342       <-- ACTGGAGGATAGCGGAAAAAGTGGGATCGCCGATCCCGTCATAACCTCTG  Raphanus raphanistrum subsp. maritimus
EY904847       <-- ACTGGAGGATAGCGGAAAAAGTGGGATCGCCGATCCCGTCATAACCTCTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD576768       <-- ........................................ATAACCTTTG  Raphanus sativus cv Rat-Tail Radish #3870
FD550945       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD546831       --> ACTGGAGGATAGCGGAAAAAGTGGGATCGCCGATCCCGTCATAACCTCTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD974554       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD984017       --> ACTGGAGGATAGCGGAAAAAGTGGGATCGCCGATCCCATCATAACCTCTG  Raphanus raphanistrum subsp. landra
EY934414       --> ACTGGAGGATAGCGGAAAAAGTGGGATCGCCGATCCCGTCGTAACCTTTG  Raphanus sativus cv Early Scarlet Globe
FD565596       --> ACTGGAGGATAGCGGAAAAAGTGGGATCGCCGATCCCGTCATAACCTCTG  Raphanus sativus var. oleiformis
FD581194       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY943397       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD565266       --> ACTGGAGGATAGCGGAAAAAGTGGGATCGCCGATCCCGTCATAACCTCTG  Raphanus sativus var. oleiformis
EY944648       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY944796       --> ACTGGAGGATAGCGGAAAAAGTGGGATCGCCGATCCCGTCATAACCTTTG  Raphanus sativus cv Rat-Tail Radish #3870
EV539975       --> ACTGGAGGATAGCGGAAAAAGTGGGATCGCCGATCCCGTCATAACCTCTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV540111       --> ACTGGAGGATAGCGGAAAAAGTGGGATCGCCGATCCCGTCATAACCTCTG  Raphanus raphanistrum subsp. raphanistrum (MS)

               700    -    750
UN10611        --> TTACTGCCTGAATAGATCATTTTCATGGTTCTTTTTAAACGGTCCTCGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY947511       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD978279       <-- TTACTGCCTGAATAGATCATTTTCATGGTTCTTTTTAAACGGTCCTCGTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV535425       <-- TTACTGCCTGAATAGATCATTTTCATGGTTCTTTTTAAACGGTCCTCGTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD560976       <-- TTACTGCCTGAATAGATCATTTTCATGGTTCTTTTTAAACGGTCCTCGTA  Raphanus sativus var. oleiformis
EX750118       <-- TTACTGCCTGAATAGATCATTTTCATGGTTCTTTTTAAACGGTCCTCGTA  Raphanus raphanistrum subsp. maritimus
FD561431       <-- TTACTGCCTGAATAGATCATTTTCACGGTTCTTTTTAAACGGTCCTCGTA  Raphanus sativus var. oleiformis
FD973830       <-- TTACTGCCTGAATAGATCATTTTCATGGTTCTTTTTAAACGGTCCTCGTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY949251       <-- TTACTGCCTGAATAGATCATTTTGATGGTTCTTTTTAAACGGTCCTCGTA  Raphanus sativus cv Rat-Tail Radish #3870
FD550935       <-- TTACTGCCTGAATAGATCATTTTGATGGTTCTTTTTAAACGGTCCTCGTA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD988068       <-- TTACTGCCTGAATAGATCATTTTCATGGTTCTTTTTAAACGGTCCTCGTA  Raphanus raphanistrum subsp. landra
EY938233       <-- TTACTGCCTGAATAGATCATTTTGATGGCTCTTTTTAAACGGTCCTCGTA  Raphanus sativus cv Early Scarlet Globe
EV535242       <-- TTACTGCCTGAATAGATCATTTTCATGGTTCTTTTTAAACGGTCCTCGTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD963342       <-- TTACTGCCTGAATAGATCATTTTCATGGTTCTTTTTAAACGGTCCTCGTA  Raphanus raphanistrum subsp. maritimus
EY904847       <-- TTACTGCCTGAATAGATCATTTTCATGGTTCTTTTTAAACGGTCCTCGTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD576768       <-- TTACTGCCTGAATAGATCATTTTGATGGTTCTTTTTAAACGGTCCTCGTA  Raphanus sativus cv Rat-Tail Radish #3870
FD550945       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD546831       --> TTACTGCCTGAATAGATCATTTTGATGGTTCTTTTT..............  Raphanus raphanistrum subsp. raphanistrum (NY)
FD974554       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD984017       --> TTACTGCCTGAATAGATCATTTTCATGGTTCTTTTTAAACGGTCCTCGTA  Raphanus raphanistrum subsp. landra
EY934414       --> TTACTGCCTGAATAGATCATTTTGATGGCTCTTTTTAAACGGTCCTCGTA  Raphanus sativus cv Early Scarlet Globe
FD565596       --> TTACTGCCTGAATAGATCATTTTCACGGTTCTTTTTAAACGGTCCTCGTA  Raphanus sativus var. oleiformis
FD581194       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY943397       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD565266       --> TTACTGCCTGAATAGATCATTTTCATGGTTCTTTTTAAACGGTCCTCGTA  Raphanus sativus var. oleiformis
EY944648       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY944796       --> TTACTGCCTGAATAGATCATTTTGATGGTTCTTTTTA.............  Raphanus sativus cv Rat-Tail Radish #3870
EV539975       --> TTACTGCCTGAATAGATCATTTTCATGGTTCTTTTTAAACGGTCCTCGTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV540111       --> TTACTGCCTGAATAGATCATTTTCATGGTTCTTTTTAAACGGTCCTCGTA  Raphanus raphanistrum subsp. raphanistrum (MS)

               750    -    800
UN10611        --> CTCACTTCCCGGCTTGTATTTTCCTTGATTAACCAAGCATTTGTGGTTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY947511       <-- ..................................................
FD978279       <-- CTCACTTCCCGGCTTGTATTTTCCTTGATTAACCAAGCATTTGTGGTTGA
EV535425       <-- CTCACTTCCCGGCTTGTATTTTCCTTGATTAACCAAGCATTTGTGGTTGA
FD560976       <-- CTCACTTCCCGGCTTGTATTTTCCTTGATTAACCAAGCATTTGTGGTTGA
EX750118       <-- CTCACTTCCCGGCTTGTATTTTCCTTGATTAACCAAGCATTTGTGGTTGA
FD561431       <-- CTCACTTCCCGGCTTGTATTTTCCTTGATTAACCAAGCATTTGTGGTTGA
FD973830       <-- CTCACTTCCCGGCTTGTATTTTCCTTGATTAACCAAGCATTTGTGGTTGA
EY949251       <-- CTCACTTCCCGGCTTGTATTTTCCTTGATTAACCAAGCATTTGTGGTTGA
FD550935       <-- CTCACTTCCCGGCTTGTATTTTCCTTGATTAACTAAGCATTTGTGGTTGA
FD988068       <-- CTCACTTCCCGGCCTGTATTTTCCTTGATTAACCAAGCATTTGTGGTTGA
EY938233       <-- CTCACTTCCCGGCTTGTATTTTCCTTGATTAACCAAGCATTTGTGGTTGA
EV535242       <-- CTCACTTCCCGGCTTGTATTTTCCTTGATTAACCAAGCATTTGTGGTTGA
FD963342       <-- CTCACTTCCCGGCTTGTATTTTCCTTGATTAACCAAGCATTTGTGGTTGA
EY904847       <-- CTCACTTCCCGGCTTGTATTTTCCTTGATTAACCAAGCATTTGTGGTTGA
FD576768       <-- CTCACTTCCCGGCTTGTATTTTCCTTGATTAACCAAGCATTTGTGGTTGA
FD550945       <-- ..................................................
FD546831       --> ..................................................
FD974554       --> ..................................................
FD984017       --> CTCACTTC..........................................
EY934414       --> CTCACTTCCCGGCTTGTATTTTCCTTGATTAACCAAGCATTTGTGGTTGA
FD565596       --> CTCACTTCCCGGCTTGTATTTTCCTTGATTAACCAAGCATTTGTGGTTGA
FD581194       --> ..................................................
EY943397       --> ..................................................
FD565266       --> CTCACTTCCCGGCTTGTATTTTCCTTG.......................
EY944648       --> ..................................................
EY944796       --> ..................................................
EV539975       --> CTCACTTCCCGGCTTGTATTTTCCTTGATTA...................
EV540111       --> CTCACTTCCCGGCTTGTATTTTCCTTGATTAACCAAGCATTTGTGGTTGA

               800    -    850
UN10611        --> GATACGCATTGGTCGTGTTTAAGGACAAGTCGCTGTTTGTCAGAAGTAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY947511       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD978279       <-- GATACGCATTGGTCGTGTTTAAGGACAAGTCGCTGTTTGTCAGAAGTAGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV535425       <-- GATACGCATTGGTCGTGTTTAAGGACAAGTCGCTGTTTGTCAGAAGTAGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD560976       <-- GATAGGCATTGGTCGTGTTTAAGGACAAGTCGCTGTTTGTCAGAAGTAGT  Raphanus sativus var. oleiformis
EX750118       <-- GATAGGCATTGGTCGTGTTTAAGGACAAGTCGCTGTTTGTCAGAAGTAGT  Raphanus raphanistrum subsp. maritimus
FD561431       <-- GATAGGCATTGGTCGTGTTTAAGGACAAGTCGCTGTTTGTCAGAAGTAGT  Raphanus sativus var. oleiformis
FD973830       <-- GATACGCATTGGTCGTGTTTAAGGACAAGTCGCTGTTTGTCAGAAGTAGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY949251       <-- GATACTCATTGGTCGTGTTTAAGGACAAGTCGCTGTTTGTCGGAAGTAGT  Raphanus sativus cv Rat-Tail Radish #3870
FD550935       <-- GATACGCATTGGTCGTGTTTAAGGACAAGTCGCTGTTTGTCAGAAGTAGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD988068       <-- GATACGCATTGGTCGTGTTTAAGGACAAGTCGCTGTTTGTCAAAAGTAGT  Raphanus raphanistrum subsp. landra
EY938233       <-- GATACTCATTGGTCGTGTTTAAGGACAAGTCGCTGTTTGTCGGAAGTAGT  Raphanus sativus cv Early Scarlet Globe
EV535242       <-- GATACGCATTGGTCGTGTTTAAGGACAAGTCGCTGTTTGTCAGAAGTAGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD963342       <-- GATAGGCATTGGTCGTGTTTAAGGACAAGTCGCTGTTTGTCAGAAGTAGT  Raphanus raphanistrum subsp. maritimus
EY904847       <-- GATACGCATTGGTCGTGTTTAAGGACAAGTCGCTGTTTGTCAGAAGTAGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD576768       <-- GATACTCATTGGTCGTGTTTAAGGACAAGTCGCTGTTTGTCGGAAGTAGT  Raphanus sativus cv Rat-Tail Radish #3870
FD550945       <-- .......................................TCAGAAGTAGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD546831       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD974554       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD984017       --> ..................................................  Raphanus raphanistrum subsp. landra
EY934414       --> GATACt............................................  Raphanus sativus cv Early Scarlet Globe
FD565596       --> G.................................................  Raphanus sativus var. oleiformis
FD581194       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY943397       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD565266       --> ..................................................  Raphanus sativus var. oleiformis
EY944648       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY944796       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV539975       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV540111       --> GATACGCATTGGTCGTGTTT..............................  Raphanus raphanistrum subsp. raphanistrum (MS)

               850    -    900
UN10611        --> TGTATGGCAAATACGTGGATCAAAATGAGGCGTTTTATTACAGACGATGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY947511       <-- ..................................................
FD978279       <-- TGTATGGCAAATACGTGGATCAAAATGAGGCGTTTTATTACAGACGATGC
EV535425       <-- TGTATGGCAAATcc....................................
FD560976       <-- TGTATGGCAAATACGTGGATCAAAATGAGGCGTTTTATTACAGACGATGC
EX750118       <-- TGTATGGCAAATACGTGGATCAAAATGc......................
FD561431       <-- TGTATGGCAAATACGTGGATCAAAATGAGGCGTTTTATTACAGACGATGC
FD973830       <-- TGTATGGCAAATACGTGGATCAAAATGAGGCGTTTTATTACAGACGATGC
EY949251       <-- TGTATGGCAAATACGTGGATCAAAATGAGGCGTTTTATTACAGACGATGC
FD550935       <-- TGTATGGCAAATACGTGGATCAAAATGAGGCGTTTTATTACAGACGATGC
FD988068       <-- TGTATGGCAAATACGTGGATCAAAATGAGGCGTTTTATTACAGACGATGC
EY938233       <-- TGTATGGCAAATACGTGGATCAAAATGAGGCGTTTTATTACAGACGATGC
EV535242       <-- TGTATGGCAAATACGTGGATCAAAATGAGGCGTTTTATTACAGACGATGC
FD963342       <-- TGTATGGCAAATACGTGGATCAAAATGAGGCGTTTTATTACAGACGATGC
EY904847       <-- TGTATGGCAAATACGTGGATCAAAATGAGGCGTTTTATTACAGACGATGC
FD576768       <-- TGTATGGCAAATACGTGGATCAAAATGAGGCGTTTTATTACAGACGATGC
FD550945       <-- TGTATGGCAAATACGTGGATCAAAATGAGGCGTTTTATTACAGACGATGC
FD546831       --> ..................................................
FD974554       --> ..................................................
FD984017       --> ..................................................
EY934414       --> ..................................................
FD565596       --> ..................................................
FD581194       --> ..................................................
EY943397       --> ..................................................
FD565266       --> ..................................................
EY944648       --> ..................................................
EY944796       --> ..................................................
EV539975       --> ..................................................
EV540111       --> ..................................................

               900    -    950
UN10611        --> TGAGTACATTGTTTTGGATGGTTTTTCGTTGGGATTGATGGTGTGAGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY947511       <-- ..................................................
FD978279       <-- TGAGTACATTGTTTTGGATGGTTTTTCGTTGGGATTGATGGTGTGAGCGA
EV535425       <-- ..................................................
FD560976       <-- TGAGTACATTGTTTTGGATGGTTTTTCGTTGGGATTGATGGTGTGAGCGA
EX750118       <-- ..................................................
FD561431       <-- TGAGTACATTGTTTTGGATGGTTTTTCGTTGGGATTGATGGTGTGAGCGA
FD973830       <-- TGAGTACATTGTTTTGGATGGTTTTTCGTTGGGATTGATGGTGTGAGAGA
EY949251       <-- TGAGTACATTGTTTTGGATGGTTTTTCGTTGGGATTGATGGTGTGAGAGA
FD550935       <-- TGAGTACATTGTTTTGGATGGTTTTTCGTTGGGATTGATGGTGTGAGAGA
FD988068       <-- TGAGTACATTGTTTTGGATGGTTTTT-GTTGGGATTGATGGTGTGAGAGA
EY938233       <-- TGAGTACATTGTTTTGGATGGTTTTTCGTTGGGATTGATGGTGTGAGAGA
EV535242       <-- TGAGTACATTGTTTTGGATGGTTTTTCGTTGGGATTGATGGTGTGAGAGA
FD963342       <-- TGAGTACATTGTTTTGGATGGTTTTTCGTTGGGATTGATGGTGTGAGAGA
EY904847       <-- TGAGTACATTGTTTTGGATGGTTTTTCGTTGGGATTGATGGTGTGAGAGA
FD576768       <-- TGAGTACATTGTTTTGGATGGTTTTTCGTTGGGATTGATGGTGTGAGAGA
FD550945       <-- TGAGTACATTGTTTTGGATGGTTTTTCGTTGGGATTGATGGTGTGAGAGA
FD546831       --> ..................................................
FD974554       --> ..................................................
FD984017       --> ..................................................
EY934414       --> ..................................................
FD565596       --> ..................................................
FD581194       --> ..................................................
EY943397       --> ..................................................
FD565266       --> ..................................................
EY944648       --> ..................................................
EY944796       --> ..................................................
EV539975       --> ..................................................
EV540111       --> ..................................................

               950    -   1000
UN10611        --> CACCGAGGGATTTAGATCC
                   ~~~~~~~~~~~~~~~~~~~
EY947511       <-- ...................
FD978279       <-- CACCGAGGGATTTAGATCC
EV535425       <-- ...................
FD560976       <-- CACCGAGGGATTTcc....
EX750118       <-- ...................
FD561431       <-- CACCGAGGGcc........
FD973830       <-- CACCGAGGGATTTcc....
EY949251       <-- Ccc................
FD550935       <-- CACCGAGGGATTTcc....
FD988068       <-- CACCGAGGGATTTAGATCC
EY938233       <-- CACCGAGGGATTTAGATCC
EV535242       <-- CACCGAGGGATTTc.....
FD963342       <-- CACCGAGGGATTTc.....
EY904847       <-- CACCGAGGGATTTcc....
FD576768       <-- CACCGAGGGATTTAGATC.
FD550945       <-- CACCGAGGGATTTcc....
FD546831       --> ...................
FD974554       --> ...................
FD984017       --> ...................
EY934414       --> ...................
FD565596       --> ...................
FD581194       --> ...................
EY943397       --> ...................
FD565266       --> ...................
EY944648       --> ...................
EY944796       --> ...................
EV539975       --> ...................
EV540111       --> ...................