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Alignment for radish unigene UN11098

               1      -     51
UN11098        --> TAGGTTGTTCTTTTAGATCTTCGCTTCGCCGTCGCTTCTCACCGGCCCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD944478       <-- ..................................................
EV545737       <-- ..................................................
EX899205       <-- ..................................................
FY432893       --> TAGGTTGTTCTTTTAGATCTTCGCTTCGCCGTCGCTTCTCACCGGCCCTT
FY432972       --> ..GGTTGTTCTTTTAGATCTTCGCTTCGCCGTCGCTTCTCACCGGCCCTT
FD534215       --> .........................TCGCCGTCGCTTCTCACCGGCCCTT
FD562813       --> .........................TCGCCGTCGCTTCTCACCGGCCCTT
FD564142       --> .........................TCGCCGTCGCTTCTCACCGGCCCTT
FD938597       --> .........................TCGCCGTCGCTTCTCACCGGCCCTT
EX894965       --> ....................................TCTCACCGGCCCTT
FY440250       --> ...........................................GGCCCTT
FY452715       --> ..................................................
EV539645       --> ..................................agatcttcgcttcgcc

               51     -    101
UN11098        --> CTCTATATCTTTAGCTTTAACAACCCAATGGCCACTCAAGCTGCAGCTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD944478       <-- ..................................................
EV545737       <-- ..................................................
EX899205       <-- ..................................................
FY432893       --> CTCTATATCTTTAGCTTTAACAACCCAATGGCCACTCAAGCTGCAGCTGC
FY432972       --> CTCTATATCTTTAGCTTTAACAACCCAATGGCCACTCAAGCTGCAGCTGC
FD534215       --> CTCTATATCTTTAGCTTTAACAACCCAATGGCCACTCAAGCTGCAGCTGC
FD562813       --> CTCTATATCTTTAGCTTTAACAACCCAATGGCCACTCAAGCTGCAGCTGC
FD564142       --> CTCTATATCTTTAGCTTTAACAACCCAATGGCCACTCAAGCTGCAACTGC
FD938597       --> CTCTATATCTTTAGCTTTAACAACCCAATGGCCACTCAAGCTGCAGCTGC
EX894965       --> CTCTATATCTTTAGCTTTAACAACCCAATGGCCACTCAAGCTGCAGCTGC
FY440250       --> CTCT-TATCTTTAGCTTTAACAACCCAATGGCCACTCAAGCTGCAGCTGC
FY452715       --> ........CTTTAGCTTTAACAACCCAATGGCCACTCAAGCTGCAGCTGC
EV539645       --> gtcgcttctcaccGCTTTAACAACCCAATGGCCACTCAAGCTGC---TGC

               101    -    151
UN11098        --> TGCCTCTTTCAATGGCAACCTTAAGAAAGCTGTGGCAGGTATAAAGCGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD944478       <-- ........................................ATAAAGCGTA
EV545737       <-- ..................................................
EX899205       <-- ..................................................
FY432893       --> TGCCTCTTTCAATGGCAACCTTAAGAAAGCTGTGGCAGGTATAAAGCGTA
FY432972       --> TGCCTCTTTCAATGGCAACCTTAAGAAAGCTGTGGCAGGTATAAAGCGTA
FD534215       --> TGCCTCTTTCAATGGCAACCTTAAGAAAGCTGTGGCAGGTATAAAGCGTA
FD562813       --> TGCCTCTTTCAATGGCAACCTTAAGAAAGCTGTGGCAGGTATAAAGCGTA
FD564142       --> TGCCTCTTTCAATGGCAACCTTAAGAAAGCTGTGGCAGGTATAAAGCGTA
FD938597       --> TGCCTCTTTCAATGGCAACCTTAAGAAAGCTGTGGCAGGTATAAAGCGTA
EX894965       --> TGCCTCTTTCAATGGCAACCTTAAGAAAGCTGTGGCAGGTATAAAGCGTA
FY440250       --> TGCCTCTTTCAATGGCAACCTTAAGAAAGCTGTGGCAGGTATAAAGCGTA
FY452715       --> TGCCTCTTTCAATGGCAACCTTAAGAAAGCTGTGGCAGGTATAAAGCGTA
EV539645       --> TGCCTCTTTCAATGGCAACCTTAAGAAAGCTGTGGCAGGTATCAAGCGTA

               151    -    201
UN11098        --> TCAATCTCGACGGTCTTCGTTGGCGTGTTTTTGATGCCAAAGGCCAGGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD944478       <-- TCAATCTCGACGGTCTTCGTTGGCGTGTTTTTGATGCCAAAGGCCAGGTT
EV545737       <-- ..................................................
EX899205       <-- ..................................................
FY432893       --> TCAATCTCGACGGTCTTCGTTGGCGTGTTTTTGATGCCAAAGGCCAGGTT
FY432972       --> TCAATCTCGACGGTCTTCGTTGGCGTGTTTTTGATGCCAAAGGCCAGGTT
FD534215       --> TCAATCTCGACGGTCTTCGTTGGCGTGTTTTTGATGCCAAAGGCCAGGTT
FD562813       --> TCAATCTCGACGGTCTTCGTTGGCGTGTTTTTGATGCCAAAGGCCAGGTT
FD564142       --> TCAATCTCGACGGTCTTCGTTGGCGTGTTTTTGATGCCAAAGGCCAGGTT
FD938597       --> TCAATCTCGACGGTCTTCGTTGGCGTGTTTTTGATGCCAAAGGCCAGGTT
EX894965       --> TCAATCTCGACGGTCTTCGTTGGCGTGTTTTTGATGCCAAAGGCCAGGTT
FY440250       --> TCAATCTCGACGGTCTTCGTTGGCGTGTTTTTGATGCCAAAGGCCAGGTT
FY452715       --> TCAATCTCGACGGTCTTCGTTGGCGTGTTTTTGATGCCAAAGGCCAGGTT
EV539645       --> TCAATCTCGACGGTCTTCGTTGGCGTGTTTTTGATGCCAAAGGCCAGGTT

               201    -    251
UN11098        --> CTCGGTAGACTTGCCTCTCAGATCTCTACTGTCCTTCAAGCCAAAGATAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD944478       <-- CTCGGTAGACTTGCCTCTCAGATCTCTACTGTCCTTCAAGCCAAAGATAA
EV545737       <-- ...........................ACTGTCCTTCAAGCCAAAGATAA
EX899205       <-- ..................................................
FY432893       --> CTCGGTAGACTTGCCTCTCAGATCTCTACTGTCCTTCAAGCCAAAGATAA
FY432972       --> CTCGGTAGACTTGCCTCTCAGATCTCTACTGTCCTTCAAGCCAAAGATAA
FD534215       --> CTCGGTAGACTTGCCTCTCAGATCTCTACTGTCCTTCAAGCCAAAGATAA
FD562813       --> CTCGGTAGACTTGCCTCTCAGATCTCTACTGTCCTTCAAGCCAAAGATAA
FD564142       --> CTCGGTAGACTTGCCTCTCAGATCTCTACTGTCCTTCAAGCCAAAGATAA
FD938597       --> CTCGGTAGACTTGCCTCTCAGATCTCTACTGTCCTTCAAGCCAAAGATAA
EX894965       --> CTCGGTAGACTTGCCTCTCAGATCTCTACTGTCCTTCAAGCCAAAGATAA
FY440250       --> CTCGGTAGACTTGCCTCTCAGATCTCTACTGTCCTTCAAGCCAAAGATAA
FY452715       --> CTCGGTAGACTTGCCTCTCAGATCTCTACTGTCCTTCAAGCCAAAGATAA
EV539645       --> CTCGGTAGACTTGCCTCTCAGATCTCTACCGTCCTTCAAGCCAAAGATAA

               251    -    301
UN11098        --> GCCTACTTATTGTCCTAACCGCGATGATGGCGATATTTGTATCGTTCTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD944478       <-- GCCTACTTATTGTCCTAACCGTGATGATGGCGATATTTGTATCGTTCTCA
EV545737       <-- GCCTACTTATTGTCCTAATCGCGATGATGGCGATATTTGTATTGTTCTCA
EX899205       <-- .................................TATTTGTATCGTTCTCA
FY432893       --> GCCTACTTATTGTCCTAACCGCGATGATGGCGATATTTGTATCGTTCTCA
FY432972       --> GCCTACTTATTGTCCTAACCGCGATGATGGCGATATTTGTATCGTTCTCA
FD534215       --> GCCTACTTATTGTCCTAACCGCGATGATGGCGATATTTGTATCGTTCTCA
FD562813       --> GCCTACTTATTGTCCTAACCGCGATGATGGCGATATTTGTATCGTTCTCA
FD564142       --> GCCTACTTATTGTCCTAACCGCGATGATGGCGATATTTGTATCGTTCTCA
FD938597       --> GCCTACTTATTGTCCTAACCGCGATGATGGCGATATTTGTATCGTTCTCA
EX894965       --> GCCTACTTATTGTCCTAACCGCGATGATGGCGATATTTGTATCGTTCTCA
FY440250       --> GCCTACTTATTGTCCTAACCGCGATGATGGCGATATTTGTATCGTTCTCA
FY452715       --> GCCTACTTATTGTCCTAACCGCGATGATGGCGATATTTGTATCGTTCTCA
EV539645       --> GCCTACTTATTGTCCTAACCGTGATGATGGCGATATTTGTATCGTTCTCA

               301    -    351
UN11098        --> ATGCTAAGGATATCGGCATCACCGGTAGAAAGCTCACCGACAAGTTCTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD944478       <-- ATGCTAAGGATATCGGCATCACCGGTAGAAAGCTCACCGACAAGTTCTAC
EV545737       <-- ATGCTAAGGATATCGGCATCACCGGTAGAAAGCTCACCGACAAGTTCTAC
EX899205       <-- ATGCTAAGGATATCGGCATCACCGGTAGAAAGCTCACCGACAAGTTCTAC
FY432893       --> ATGCTAAGGATATCGGCATCACCGGTAGAAAGCTCACCGACAAGTTCTAC
FY432972       --> ATGCTAAGGATATCGGCATCACCGGTAGAAAGCTCACCGACAAGTTCTAC
FD534215       --> ATGCTAAGGATATCGGCATCACCGGTAGAAAGCTCACCGACAAGTTCTAC
FD562813       --> ATGCTAAGGATATCGGCATCACCGGTAGAAAGCTCACCGACAAGTTCTAC
FD564142       --> ATGCTAAGGATATCGGCATCACCGGTAGAAAGCTCACCGACAAGTTCTAC
FD938597       --> ATGCTAAGGATATCGGCATCACCGGTAGAAAGCTCACCGACAAGTTCTAC
EX894965       --> ATGCTAAGGATATCGGCATCACCGGTAGAAAGCTCACCGACAAGTTCTAC
FY440250       --> ATGCTAAGGATATCGGCATCACCGGTAGAAAGCTCACCGACAAGTTCTAC
FY452715       --> ATGCTAAGGATATCGGCATCACCGGTAGAAAGCTCACCGACAAGTTCTAC
EV539645       --> ATGCTAAGGATATCGGCATCACCGGTCGAAAGCTCACCGACAAGTTCTAC

               351    -    401
UN11098        --> CGCTGGCATACTGGGTACGTTGGACACCTGAAAGAACGAAGTCTGAAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD944478       <-- CGCTGGCATACTGGGTACGTTGGACACCTGAAAGAACGAAGTCTGAAAGA
EV545737       <-- CGCTGGCATACTGGGTACGTTGGACACCTGAAAGAACGAAGTCTGAAAGA
EX899205       <-- CGCTGGCATACTGGGTACGTTGGACACCTGAAAGAACGAAGTCTGAAAGA
FY432893       --> CGCTGGCATACTGGGTACGTTGGACACCTGAAAGAACGAAGTCTGAAAGA
FY432972       --> CGCTGGCATACTGGGTACGTTGGACACCTGAAAGAACGAAGTCTGAAAGA
FD534215       --> CGCTGGTATACTGGGTACGTTGGACACCTGAAAGAACGAAGTCTGAAAGA
FD562813       --> CGCTGGCATACTGGGTACGTTGGACACCTGAAAGAACGAAGTCTGAAAGA
FD564142       --> CGCTGGCATACTGGGTACGTTGGACACCTGAAAGAACGAAGTCTGAAAGA
FD938597       --> CGCTGGCATACTGGGTACGTTGGACACCTGAAAGAACGAAGTCTGAAAGA
EX894965       --> CGCTGGCATACTGGGTACGTTGGACACCTGAAAGAACGAAGTCTGAAAGA
FY440250       --> CGCTGGCATACTGGGTACGTTGGACACCTGAAAGAACGAAGTCTGAAAGA
FY452715       --> CGCTGGCATACTGGGTACGTTGGACACCTGAAAGAACGAAGTCTGAAAGA
EV539645       --> CGCTGGCATACTGGGTACGTTGGACACCTGAAAGAACGGAGTCTCAAAGA

               401    -    451
UN11098        --> TCAGATGGCCAAAGACCCCACCGAGGTCATCCGTAAGGCTGTCTGGCGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD944478       <-- TCAGATGGCCAAAGACCCCACCGAGGTCATCCGTAAGGCTGTCTGGCGCA
EV545737       <-- TCAGATGGCCAAAGACCCCACCGAGGTCATCCGTAAGGCTGTCTGGCGCA
EX899205       <-- TCAGATGGCCAAAGACCCCACCGAGGTCATCCGTAAGGCTGTCTGGCGCA
FY432893       --> TCAGATGGCCAAAGACCCCACCGAGGTCATCCGTAAGGCTGTCTGGCGCA
FY432972       --> TCAGATGGCCAAAGACCCCACCGAGGTCATCCGTAAGGCTGTCTGGCGCA
FD534215       --> TCAGATGGCCAAAGACCCCACCGAGGTCATCCGTAAGGCTGTCTGGCGCA
FD562813       --> TCAGATGGCCAAAGACCCCACCGAGGTCATCCGTAAGGCTGCCTGGCGCA
FD564142       --> TCAGATGGCCAAAGACCCCACCGAGGTCATCCGTAAGGCTGTCTGGCGCA
FD938597       --> TCAGATGGCCAAAGACCCCACCGAGGTCATCCGTAAGGCTGCCTGGCGCA
EX894965       --> TCAGATGGCCAAAGACCCCACCGAGGTCATCCGTAAGGCTGTCTGGCGCA
FY440250       --> TCAGATGGCCAAAGACCCCACCGAGGTCATCCGTAAGGCTGTCTGGCGCA
FY452715       --> TCAGATGGCCAAAGACCCCACCGAGGTCATCCGTAAGGCTGTCTGGCGCA
EV539645       --> TCAGATGGCCAAAGACCCCACCGAGGTCATCCGTAAGGCTGTCTGGCGCA

               451    -    501
UN11098        --> TGCTTCCTACTAACAACTTGCGTGATGACAGAGATCGGAAGCTGAGGATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD944478       <-- TGCTTCCTACTAACAACTTGCGTGATGACAGAGATCGGAAGCTGAGGATC
EV545737       <-- TGCTTCCTACTAACAACTTGCGTGATGACAGAGATCGGAAGCTGAGGATC
EX899205       <-- TGCTTCCTACTAACAACTTGCGTGATGACAGAGATCGGAAGCTGAGGATC
FY432893       --> TGCTTCCTACTAACAACTTGCGTGATGACAGAGATCGGAAGCTGAGGATC
FY432972       --> TGCTTCCTACTAACAACTTGCGTGATGACAGAGATCGGAAGCTGAGGATC
FD534215       --> TGCTTCCTACTAACAACTTGCGTGATGACAGAGATCGGAAACTGAGGATC
FD562813       --> TGCTTCCTACTAACAACTTGCGTGATGACAGAGATCGGAAGCTGAGGATC
FD564142       --> TGCTTCCTACTAACAACTTGCGTGATGACAGAGATCGGAAGCTGAGGATC
FD938597       --> TGCTTCCTACTAACAACTTGCGTGATGACAGAGATCGGAAGCTGAGGATC
EX894965       --> TGCTTCCTACTAACAACTTGCGTGATGACAGAGATCGGAAGCTGAGGATC
FY440250       --> TGCTTCCTACTAACAACTTGCGTGATGACAGAGATCGGAAGCTGAGGATC
FY452715       --> TGCTTCCTACTAACAACTTGCGTGATGACAGAGATCGGAAGCTGAGGATC
EV539645       --> TGCTTCCTACTAACAACTTGCGTGATGACAGAGATCGGAAGCTGAGGATC

               501    -    551
UN11098        --> TTTGAAGGCAATGAGCATCCTTTTGGGGACAAGCCACTCGAGCCTTTCGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD944478       <-- TTTGAAGGCAATGAGCATCCTTTTGGGGACAAGCCACTCGAGCCTTTCGT
EV545737       <-- TTTGAAGGCAATGAGCATCCTTTTGGGGACAAGCCACTCGAGCCATTCGT
EX899205       <-- TTTGAAGGCAATGAGCATCCTTTTGGGGACAAGCCACTCGAGCCTTTCGT
FY432893       --> TTTGAAGGCAATGAGCATCCTTTTGGGGACAAGCCACTCGAGCCTTTCGT
FY432972       --> TTTGAAGGCAATGAGCATCCTTTTGGGGACAAGCCACTCGAGCCTTTCGT
FD534215       --> TTTGAAGGCAATGAGCATCCTTTTGGGGACAAGCCACTCGAGCCTTTCGT
FD562813       --> TTTGAAAGCAATGAGCATCCTTTTGGGGACAAGCCACTCGAGCCTTTCGT
FD564142       --> TTTGAAGGCAATGAGCATCCTTTTGGGGACAAGCCACTCGAGCCTTTCGT
FD938597       --> TTTGAAGGCAATGAGCATCCTTTTGGGGACAAGCCACTCGAGCCTTTCGT
EX894965       --> TTTGAAGGCAATGAGCATCCTTTTGGGGACAAGCCACTCGAGCCTTTCGT
FY440250       --> TTTGAAGGCAATGAGCATCCTTTTGGGGACAAGCCACTCGAGCCTTTCGT
FY452715       --> TTTGAAGGCAATGAGCATCCTTTTGGGGACAAGCCACTCGAGCCTTTCGT
EV539645       --> TTTGAAGGCAATGAGCATCCTTTTGGGGACAAGCCACTCGAGCCATTCGT

               551    -    601
UN11098        --> CATGCCTCCTCGTACCGTGAGAGAGATGCGACCCCGCGCTAGACGTGCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD944478       <-- CATGCCTCCTCGTACCGTGAGAGAGATGCGACCCCGCGCTAGACGTGCTA
EV545737       <-- CATGCCTCCTCGTACCGTGAGAGAGATGCGACCCCGCGCTAGACGTGCTA
EX899205       <-- CATGCCTCCTCGTACCTTGAGAGAGATGCGACCCCGCGCTAGACGTGCTA
FY432893       --> CATGCCTCCTCGTACCGTGAGAGAGATGCGACCCCGCGCTAGACGTGCTA
FY432972       --> CATGCCTCCTCGTACCGTGAGAGAGATGCGACCCCGCGCTAGACGTGCTA
FD534215       --> CATGCCTCCTCGTACCGTGAGAGAGATGCGACCCCGCGCTAGACGTGCTA
FD562813       --> CATGCCTCCTCGTACCGTGAGAGAGATGCGACCCCGCGCTAGACGTGCTA
FD564142       --> CATGCCTCCTCGTACCGTGAGAGAGATGCGACCCCGCGCTAGACGTGCTA
FD938597       --> CATGCCTCCTCGTACCGTGAGAGAGATGCGACCCCGCGCTAGACGTGCTA
EX894965       --> CATGCCTCCTCGTACCTTGAGAGAGATGCGACCCCGCGCTAGACGTGCTA
FY440250       --> CATGCCTCCTCGTACCGTGAGAGAGATGCGACCCCGCGCTAGACGTGCTA
FY452715       --> CATGCCTCCTCGTACCGTGAGAGAGATGCGACCCCGCGCTAGACGTGCTA
EV539645       --> CATGCCTCCTCGTACCGTGATAGAGATGCGACCCCGC.............

               601    -    651
UN11098        --> TGATCCGTGCCCAGAAGAAGGCAGAGCTGGCAGAAAATGGTGGAACTGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD944478       <-- TGATCCGTGCCCAGAAGAAGGCAGAGCTGGCAGAAAATGGTGGAACTGAG
EV545737       <-- TGATCCGTGCCCAGAAGAAGGCAGAGCTGGCAGAAAATGGTGGAACTGAG
EX899205       <-- TGATCCGTGCCCAGAAGAAGGCAGAGCTGGCAGAAAATGGTGGAACTGAG
FY432893       --> TGATCCGTGCCCAGAAGAAGGCAGAGCTGGCAGAAAATGGTGGAACTGAG
FY432972       --> TGATCCGTGCCCAGAAGAAGGCAGAGCTGGCAGAAAATGGTGGAACTGAG
FD534215       --> TGATCCGTGCCCAGAA..................................
FD562813       --> TGA...............................................
FD564142       --> TGATCCGTGCCCAGAAG.................................
FD938597       --> TGATCCGTGCCCAGAA..................................
EX894965       --> TGATCCGTGCCCAGAAGAAAGCAGAGCTGGCAGAAAATGGTGGAACTGAG
FY440250       --> TGATCCGTGCCCAGAAGAAGGCAGAGCTGGCAGAAAATGGTGGAACTGAG
FY452715       --> TGATCCGTGCCCAGAAGAAGGCAGAGCTGGCAGAAAATGGTGGAACTGAG
EV539645       --> ..................................................

               651    -    701
UN11098        --> GTTAAGAAAGGCAAGAAGAGGACTCCCTCTCAAGTAACTACTGCCTAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD944478       <-- GTTAAGAAAGGCAAGAAGAGGACTCCCTCTCAAGTAACTACTGCCTAGAA
EV545737       <-- GTTAAGAAAGGCAAGAAGAGGACTCCCTCTCAAGTAACTACTGCCTAGAA
EX899205       <-- GTTAAGAAAGGCAAGAAGAGGACTCCCTCTCAAGTAACTACTGCCTAGAA
FY432893       --> GTTAAGAAAGGCAAGAAGAGGACTCCCTCTCAAGTAACTACTGCCTAGAA
FY432972       --> GTTAAGAAAGGCAAGAAGAGGACTCCCTCTCAAGTAACTACTGCCTAGAA
FD534215       --> ..................................................
FD562813       --> ..................................................
FD564142       --> ..................................................
FD938597       --> ..................................................
EX894965       --> GTTAAGAAAGGCAAGAAGAGGACTCtct......................
FY440250       --> GTTAAGAAAGGCAAGAAGAGGACTCCCTCTCAAGTAACTACTGCCTAGAA
FY452715       --> GTTAAGAAAGGCAAGAAGAGGACTCCCTCTCAAGTAACTACTGCCTAGAA
EV539645       --> ..................................................

               701    -    751
UN11098        --> GAAAAGCTTCAGACAGCAACTTAGTAGTGTGATTCGTATCTTTATATAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD944478       <-- GAAAAGCTTCAGACAGCAACTTAGTAGTGTGATTCGTGTCTTTATATAAT  Raphanus sativus cv Early Scarlet Globe
EV545737       <-- GAAAAGCTTCAGACAGCAACTTAGTAGTGTGATTCGTGTCTTTATATAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX899205       <-- GAAAAGCTTCAGACAGCAACTTAGTAGTGTGATTCGTGTCTTTATATAAT  Raphanus sativus cv Early Scarlet Globe
FY432893       --> GAAAAGCTTCAGACAGCAACTTAGTAGTGTGATTCGTATCTTTATATAAT  Raphanus sativus cv GSK3-1
FY432972       --> GAAAAGCTTCAGACAGCAACTTAGTAGTGTGATTCGTATCTTTATATAAT  Raphanus sativus cv GSK3-1
FD534215       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD562813       --> ..................................................  Raphanus sativus var. oleiformis
FD564142       --> ..................................................  Raphanus sativus var. oleiformis
FD938597       --> ..................................................  Raphanus sativus var. oleiformis
EX894965       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FY440250       --> GAAAAGCTTCAGACAGCAACTTAGTAGTGTGATTCGTATCTTTATATAAT  Raphanus sativus cv GSK3-1
FY452715       --> GAAAAGCTTCAGACAGCAACTTAGTAGTGTGATTCGTATCTTTATATAAT  Raphanus sativus cv GSK3-1
EV539645       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               751    -    801
UN11098        --> AGGCGGCAGGCGTGGATAAGCTTGTAAGGTTTTCTTGTTTCTGGATGCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD944478       <-- AGGCGGCAGGCGTGGATAAGCTTGTAAGGTTTTCTTGTTTCTGGATGCCA
EV545737       <-- AGGCGGCAGGCGTGGATAAGCTTGTAAGGTTTTCTTGTTTCTGGATGCCA
EX899205       <-- AGGCGGCAGGCGTGGATAAGCTTGTAAGGTTTTCTTGTTTTTGGATGCCA
FY432893       --> AGGCGGCAGGCGTGGATAAGCTTGTAAGGTTTTCTTGTTTTTGGATGCCA
FY432972       --> AGGCGGCAGGCGTGGATAAGCTTGTAAGGTTTTCTTGTTTTTGGATGCCA
FD534215       --> ..................................................
FD562813       --> ..................................................
FD564142       --> ..................................................
FD938597       --> ..................................................
EX894965       --> ..................................................
FY440250       --> AGGCGGCAGGCGTGGATAAGCTTGTAAGGTTTTCTTGTTTCTGGATGCCA
FY452715       --> AGGCGGCAGGCGTGGATAAGCTTGTAAGGTTTTCTTGTTTCTGGATGCCA
EV539645       --> ..................................................

               801    -    851
UN11098        --> GACAATAATATACTCTCGTTTCTGTCCCTTTTCTTCCATTTCACACCTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD944478       <-- GACAATAATATACTCTCGTTTCTGTCCCTTTTCTTCCATTTCACACCTGC
EV545737       <-- GACAATAATATACTCTCGTTTCTGcc........................
EX899205       <-- GACAATAATATACTCTCGTTTCTGTCCCTTTTCTTCCATTTCACACCTGC
FY432893       --> GACAATAATATACTCTCGTTTCTGTCCCTTTTCTTCCATTTCACACCTGC
FY432972       --> GACAATAATATACTCTCGTTTCTGTCCCTTTTCTTCCATTTCACACCTGC
FD534215       --> ..................................................
FD562813       --> ..................................................
FD564142       --> ..................................................
FD938597       --> ..................................................
EX894965       --> ..................................................
FY440250       --> GACAATAATATACTCTCGTTTCTGTCCCTTTTCTTCCATTTCACACCTGC
FY452715       --> GACAATAATATACTCTCGTTTCTGTCCCTTTTCTTCCATTTCACACCTGC
EV539645       --> ..................................................

               851    -    901
UN11098        --> TCGATT-ACACAAGTGTCGCTAGCAGGCTTTTGTTCTCTCGGTCGTTTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD944478       <-- TCGATT-ACAC.......................................
EV545737       <-- ..................................................
EX899205       <-- TCGATT-ACACAAGTGTCGCTAGCAGGCTTTTGTTCTCTCGGTCGTTTGT
FY432893       --> TCGATT-ACACAAGTGTCGCTAGCAGGCTTTTGTTCTCTCGGTCGTTTGT
FY432972       --> TCGATT-ACACAAGTGTCGCTAG...........................
FD534215       --> ..................................................
FD562813       --> ..................................................
FD564142       --> ..................................................
FD938597       --> ..................................................
EX894965       --> ..................................................
FY440250       --> TCGATTTACACA-GTGTCGCTAGCAGGCTTTTGTTCTCTCGGTCGTTTGG
FY452715       --> TCGATTTACACA-GTGTCGCTAGCAGGCTTTTGTTCTCTCGGTCGTTTGT
EV539645       --> ..................................................

               901    -    951
UN11098        --> TTGTTATCATCCAAATTTTTATTTTTATATGATTCCAATGTTTGCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD944478       <-- ...............................................
EV545737       <-- ...............................................
EX899205       <-- TTGTTATCATCCAAATTTTTATTTTTATATGATTCCAATGTTTGCTT
FY432893       --> TTGTTATCATCCA..................................
FY432972       --> ...............................................
FD534215       --> ...............................................
FD562813       --> ...............................................
FD564142       --> ...............................................
FD938597       --> ...............................................
EX894965       --> ...............................................
FY440250       --> GTTGTATCATCC...................................
FY452715       --> TTTGTATCATCCAAATTTTTAT.........................
EV539645       --> ...............................................