1 - 51
UN11187 --> GGGCAATTTTCTCACCAAAAGACCTCCTCTCTTTTTTTTTTTTATTATAA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959639 <-- ..................................................
EV541893 <-- ..................................................
FD537713 <-- ..................................................
FD963287 --> GGGCAATTTTCTCACCAAAAGACCTCCTCTCTTTTTTTTTTTTATTATAA
FD541429 --> ..............................................ATAA
EV537715 --> ..................................................
FD557197 --> ..................................................
51 - 101
UN11187 --> CCAAACCTCTCTTCTTTTATGTCAAAAGATTATGTGTAATTAATAAACAA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959639 <-- ..................................................
EV541893 <-- ..................................................
FD537713 <-- ..................................................
FD963287 --> CCAAACCTCTCTTCTCTTATGTCAAAAGATTATGTGTAATTAATAAACAA
FD541429 --> CCAAACCTCTCTTCTTTTATGTCAAAAGATTATGTGTAATTAATAAACAA
EV537715 --> ..................................................
FD557197 --> ..................................................
101 - 151
UN11187 --> AAAATATTTATCTCTTTCTTAATCCCAGGAAGAATATAGAAACAATGTCT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959639 <-- ..................................................
EV541893 <-- ..................................................
FD537713 <-- ..................................................
FD963287 --> AAAATATTTATCTCTTTCTTAATCCCAGGAAGAATATAGAAACAATGTCT
FD541429 --> AAAATATCAATCTCTTTCTTAATCCCAGGAAGAATATAGAAACAATGTCT
EV537715 --> ..................................................
FD557197 --> ..................................................
151 - 201
UN11187 --> AAATTATCGTTTAATAATCTCATCTTTTTTATCATCATTTTCTTCGTCTT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959639 <-- ..................................................
EV541893 <-- ..................................................
FD537713 <-- ..................................................
FD963287 --> AAATTATCGTTTAATAATCTCATCTTCTTGATCATAACTTTCTTCGTCTT
FD541429 --> AAATTATCGCTTAATAATCTCATCTTTTTTATCATCATTTTCTTCGTCTT
EV537715 --> ..................................................
FD557197 --> ..................................................
201 - 251
UN11187 --> CTTGTGTTTGTGTTTGAGATCATCAGCGTTCACGAATCTCAATACCTTAA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959639 <-- ..................................................
EV541893 <-- ..................................................
FD537713 <-- ..................................................
FD963287 --> CTTGTGTTTGTGTTTGAGATCATCAGCGTTCACGAATCTCAATACCTTAA
FD541429 --> CTTGTGTTTGTGTTTGAGATCATCAGCGTTCACGAATCTCAATACCTTAA
EV537715 --> ..................................................
FD557197 --> ..................................................
251 - 301
UN11187 --> GCTTCGAAGAATCACTTTCTCCTTTATTCGGTGACGCTAATCTCGTCCGG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959639 <-- ..................................................
EV541893 <-- ..................................................
FD537713 <-- ..................................................
FD963287 --> GCTTCGAAGAATCACTTTCTCCTTTATTCGGTGACGCTAATCTCGTCCGG
FD541429 --> GCTTCGAAGAATCACTTTCTCCTTTATTCGGTGACGCTAATCTCGTCCGG
EV537715 --> ..................................................
FD557197 --> ..................................................
301 - 351
UN11187 --> TCTCCTGATGATCTCTCCGTTCGCCTCCTCCTCGATCGATACACTGGTTC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959639 <-- ..................................................
EV541893 <-- ..................................................
FD537713 <-- ..................................................
FD963287 --> TCTCCTGATGATCTCTCCGTTCGCCTCCTCCTCGATCGATACACTGGTTC
FD541429 --> TCTCCTGATGATCTCTCCGTTCGCCTCCTCCTCGATCGATACACTGGTTC
EV537715 --> ..................................................
FD557197 --> ..................................................
351 - 401
UN11187 --> TGGTTTCATATCATCGAACATGTATCAACATGGATTTTACAGCTCTATGA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959639 <-- ..................................................
EV541893 <-- ..................................................
FD537713 <-- ..................................................
FD963287 --> TGGTTTCATATCATCGAACATGTATCAACATGGATTTTACAGCTCTATGA
FD541429 --> TGGTTTCATATCATCGAACATGTATCAACATGGATTTTACAGCTCTATGA
EV537715 --> ..................................................
FD557197 --> ..................................................
401 - 451
UN11187 --> TCAAGCTTCCCGCCGATTATACTGCCGGCGTCGTCGTCGCCTTTTATACA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959639 <-- ..........................................TTTATACA
EV541893 <-- ..................................................
FD537713 <-- ..................................................
FD963287 --> TCAAGCTTCCCGCCGATTATACTGCCGGCGTCGTCGTCGCCTTTTATACA
FD541429 --> TCAAGCTTCCCGCCGATTATACTGCCGGCGTCGTCGTCGCCTTTTATACA
EV537715 --> ..................................................
FD557197 --> ..................................................
451 - 501
UN11187 --> TCAAACGGAGACGTGTTCCAGAAAACACATGACGAGTTAGACATAGAGTT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959639 <-- TCAAACGGAGACGTGTTCCAGAAAACACATGACGAGTTAGACATAGAGTT
EV541893 <-- ..................................................
FD537713 <-- ..................................................
FD963287 --> TCAAACGGAGACGTGTTCCAGAAAACACATGACGAGTTAGACATAGAGTT
FD541429 --> TCAAACGGAGACGTGTTCCAGAAAACACATGACGAGTTAGACATAGAGTT
EV537715 --> ..................................................
FD557197 --> ..................................................
501 - 551
UN11187 --> TTTAGGGAACATAAAAGGAAAACCATGGAGGTTTCAGACAAATCTGTACG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959639 <-- TTTAGGGAACATAAAAGGAAAACCATGGAGGTTTCAGACAAATCTGTACG
EV541893 <-- ..................................................
FD537713 <-- ..................................................
FD963287 --> TTTAGGGAACATAAAAGGAAAACCATGGAGGTTTCAGACAAATCTGTACG
FD541429 --> TTTAGGGAACATAAAAGGAAAACCATGGGGGTTTCAGACAAATCTGTACG
EV537715 --> ...........................GAGGTTTCAGACAAATCTGTACG
FD557197 --> ..................................................
551 - 601
UN11187 --> GTAATGGAAGCACGCCTAGAGGTCGTGAAGAAAGATACCGTCTCTGGTTC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959639 <-- GTAATGGAAGCACGCCTAGAGGTCGTGAAGAAAGATACCGTCTCTGGTTC
EV541893 <-- ...................AGGTCGTGAAGAAAGATACCGTCTCTGGTTC
FD537713 <-- ..................................................
FD963287 --> GTAATGGAAGCACGCCTAGAGGTCGTGAAGAAAGATACCGTCTCTGGTTC
FD541429 --> GTAATGGAAGCACGCCTAGAGGTCGTGAAGAAAGATACCGTCTCTGGTTC
EV537715 --> GTAATGGAAGCACGCCTAGAGGTCGTGAAGAAAGATACCGTCTCTGGTTC
FD557197 --> .....................GTCGTGAAGAAAGATACCGTCTCTGGTTC
601 - 651
UN11187 --> GATCCTTCTAAAGAGTTTCATCGTTACAGCATCCTCTGGACTCCTCACAA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959639 <-- GATCCTTCTAAAGAGTTCCATCGTTACAGCATCCTCTGGACTCCTCACAA
EV541893 <-- GATCCTTCTAAAGAGTTTCATCGTTACAGCATCCTCTGGACTCCTCACAA
FD537713 <-- ..................................................
FD963287 --> GATCCTTCTAAAGAGTTCCATCGTTACAGCATCCTCTGGACTCCTCACAA
FD541429 --> GATCCTTCTAAAGAGTTTCATCGTTACAGCATCCTCTGGACTCCTCACAA
EV537715 --> GATCCTTCTAAAGAGTTTCATCGTTACAGCATCCTCTGGACTCCTCACAA
FD557197 --> GATCCTTCTAAAGAGTTTCATCGTTACAGCATCCTCTGGACTCCTCACAA
651 - 701
UN11187 --> GATCATATTTTGGGTAGATGATGTGCCGATAAGAGAAGTAATAAGAAGTG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959639 <-- GATCATATTTTGGGTAGATGATGTGCCGATAAGAGAAGTAATAAGAAGTG
EV541893 <-- GATCATATTTTGGGTAGATGATGTGCCGATAAGAGAAGTAATAAGAAGTG
FD537713 <-- ..................................................
FD963287 --> GATCATATTTTGGGTAGATGATGTGCCGATAAGAGA-GTAATAAGAAGTG
FD541429 --> GATCATATTTTGGGTAGATGATGTGCCGATAAGAGAAGTAATAAGAAGTG
EV537715 --> GATCATATTTTGGGTAGATGATGTGCCGATAAGAGAAGTAATAAGAAGTG
FD557197 --> GATCATATTTTGGGTAGATGATGTGCCGATAAGAGAAGTAATAAGAAGTG
701 - 751
UN11187 --> AAGCTATGGGAGCCGATTATCCAGCGAAGCCAATGGCTCTTTACGCCACC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959639 <-- AAGCAATGGGAGCCGATTATCCAGCGAAGCCAATGGCTCTTTACGCCACC Raphanus raphanistrum subsp. maritimus
EV541893 <-- AAGCTATGGGAGCCGATTATCCAGCAAAGCCAATGGCTCTTTACGCCACC Raphanus raphanistrum subsp. raphanistrum (MS)
FD537713 <-- .................................................. Raphanus raphanistrum subsp. raphanistrum (MS)
FD963287 --> AAGC-ATGGGAGCCGAT-ATCCAGCGAAGCCA-TGGCTCTTTACGC-ACC Raphanus raphanistrum subsp. maritimus
FD541429 --> AAGCTATGGGAGCCGATTATCCAGCAAAGTC-ATGGCTCTTTACGCCACC Raphanus raphanistrum subsp. raphanistrum (MS)
EV537715 --> AAGCTATGGGAGCCGATTATCCAGCAAAGCCAATGGCTC........... Raphanus raphanistrum subsp. raphanistrum (MS)
FD557197 --> AAGCAATGGGAGCCGATTATCCAGCGAAGCCAATGGCTCTTTACGCCACC Raphanus raphanistrum subsp. landra
751 - 801
UN11187 --> ATCTGGGATGCCTCCGATTGGGCAACTTCTGGCGGAAAATACAAAGCTAA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959639 <-- ATTTGGGATGCCTCCGATTGGGCAACCTCTGGCGGAAAATACAAAGCTAA
EV541893 <-- ATCTGGGATGCCTCTGATTGGGCAACTTCTGGCGGAAAATACAAAGCTAA
FD537713 <-- .......ATGCCTCCGATTGGGCAACTTCTGGCGGAAAATACAAAGCTAA
FD963287 --> ATCTGGGATG........................................
FD541429 --> ATCTGGGATGCCTCCGAT-GGGCA-CTTCTGGCGGA..............
EV537715 --> ..................................................
FD557197 --> ATCTGGGATGCCTCCGATTGGGCAACCTCTGGCGGAAAATACAAAGCTAA
801 - 851
UN11187 --> TTATAAATTTGCTCCTTTTGTCGCAGAATTCAAATCTTTCTCTCTTGATG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959639 <-- TTACAAATTTGCTCCTTTTGTCGCAGAATTCAAATCTTTCTCCCTTGATG
EV541893 <-- TTATAAATTTGCTCCTTTTGTCGCAGAATTCAAATCTTTCTCTCTTGATG
FD537713 <-- TTATAAATTTGCTCCTTTTGTCGCAGAATTCAAATCTTTCTCTCTTGATG
FD963287 --> ..................................................
FD541429 --> ..................................................
EV537715 --> ..................................................
FD557197 --> TTACAAATTTGCTCCTTTTGTTGCAGAATTCAAATCTTTCTCCCTTGATG
851 - 901
UN11187 --> GTTGCTCTGTTGATCCCATCCAAGAAGTTCCTGTTGATTGCTCTGACTCC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959639 <-- GTTGCTCTGTTGATCCCATCCAAGAAGTTCCTGTTGATTGCTCTGACTCC
EV541893 <-- GTTGCTCTGTTGATCCCATCCAAGAAGTTCCTGTTGATTGCTCTGACTCC
FD537713 <-- GTTGCTCTGTTGATCCCATCCAAGAAGTTCCTGTTGATTGCTCTGACTCC
FD963287 --> ..................................................
FD541429 --> ..................................................
EV537715 --> ..................................................
FD557197 --> GTTGCTCTGTTGATCCCATCCAAGAAGTTCCTGTTGATTGCTCTGACTCC
901 - 951
UN11187 --> GTCGAGTTCCTTGAGTCGCAAGATTACTCCTCTATCAATTCACATCAACG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959639 <-- GTCGAGTTCCTTGAGTCGCAAGATTACTCCTCTATCAATTCCCATCAACG
EV541893 <-- GTCGAGTTCCTTGAGTCACAAGATTACTCCTCTATCAATTCACATCAACG
FD537713 <-- GTCGAGTTCCTTGAGTCACAAGATTACTCCTCTATCAATTCACATCAACG
FD963287 --> ..................................................
FD541429 --> ..................................................
EV537715 --> ..................................................
FD557197 --> GTCGAGTTCCTTGAGTCGCAAGATTACTCCTCTATCAATTCACATCAACG
951 - 1001
UN11187 --> TGCCGCCATGAGAAGATTCCGACAACGTTTTATGTATTATTCTTATTGCT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959639 <-- TGCCGCCATGAGAAGATTCCGACAACGTTTTATGTATTATTCTTATTGCT
EV541893 <-- TGCCGCCATGAGAAGATTCCGACAACGTTTTATGTATTATCCTTATTGCT
FD537713 <-- TGCCGCCATGAGAAGATTCCGACAACGTTTTATGTATTATTCTTATTGCT
FD963287 --> ..................................................
FD541429 --> ..................................................
EV537715 --> ..................................................
FD557197 --> TGCCGCCATGAGAAGATTCCGACAACGTTTTATGTATTATTCTTATTGCT
1001 - 1051
UN11187 --> ATGATACAATTAGGTATCCGAAGCCACCACCAGAGTGTGTGATTGTTCCG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959639 <-- ATGATACAATTAGGTATCCGAAGCCACCACCAGAGTGTGTGATTGTTCCG
EV541893 <-- ATGATACAATTAGGTATCCGAAGCCACCACCAGAGTGTGTGATTGTTCCG
FD537713 <-- ATGATACAATTAGGTATCCGAAGCCACCACCAGAGTGTGTGATTGTTCCG
FD963287 --> ..................................................
FD541429 --> ..................................................
EV537715 --> ..................................................
FD557197 --> ATGATACAATTAGGTATCCGAAGCCACCACCAGAGTGTGTGATTGTTCCG
1051 - 1101
UN11187 --> GCAGAGAAAGATAGGTTTAGGGATACAGGGAGGTTGAAATTTGGTGGTAC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959639 <-- GCAGAGAAAGATAGGTTTAGGGATACAGGGAGGTTGAAATTTGGTGGTAC
EV541893 <-- GCAGAGAAAGATAGGTTTAGGGATACAGGGAGGTTAAAATTTGGTGGTAC
FD537713 <-- GCAGAGAAAGATAGGTTTAGGGATACAGGGAGGTTAAAATTTGGTGGTAC
FD963287 --> ..................................................
FD541429 --> ..................................................
EV537715 --> ..................................................
FD557197 --> GCAGAGAAAGATAGGTTTAGGGATACAGGGAGGTTGAAATTTGGTGGTAC
1101 - 1151
UN11187 --> AGAAGCTCGCGAACGGCGGAGGAATCGCGGACAACAAAGGCCAGAGATTG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959639 <-- AGAAGCTCGCGAACGGCGGAGGAATCGCGGACAACAAAGGCCAGAGATTG
EV541893 <-- AGAAGCTCGCGAACGGCGGAGGAACCGAGGACAACAAAGGCCAGAGATTG
FD537713 <-- AGAAGCTCGCGAACGGCGGAGGAACCGAGGACAACAAAGGCCAGAGATTG
FD963287 --> ..................................................
FD541429 --> ..................................................
EV537715 --> ..................................................
FD557197 --> AGAAGCTCGCGAACGGCGGAGGAATCGC--ACAACAAAGGCCAGAGATTG
1151 - 1201
UN11187 --> AAAGTGATCCTGATGAGAGAAAGCTTTTATAATAAGATTTATGTTGTTGT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959639 <-- AAAGTGATCCTGATGAGAGAAAGCTTTTATAATAAGATTTATGTTGTTGT
EV541893 <-- AAAGTGATCCTGATGAGAGAAAGCTTTTATAATAAGATTTATGTTGTTGT
FD537713 <-- AAAGTGATCCTGATGAGAGAAAGCTTTTATAATAAGATTTATGTTGTTGT
FD963287 --> ..................................................
FD541429 --> ..................................................
EV537715 --> ..................................................
FD557197 --> AAAGTGATCCTGATGAGAAAAAGCTTTTATA-TAAGATTTGTGTTGTTGT
1201 - 1251
UN11187 --> TTTTACTTAAAATTCATTTGTGAGTAAAGATGAAAAAAATAAAAGAGTGA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959639 <-- TTTTACTTAAAATTCATTTGTGAGTAAAGATG..................
EV541893 <-- TTTTACTTAAAATTCATTTGTGAGTAAAGATGAAAAAAATAAAAGAGTGA
FD537713 <-- TTTTACTTAAAATTCATTTGTGAGTAAAGATGAAAAAAATAAAAGAGTGA
FD963287 --> ..................................................
FD541429 --> ..................................................
EV537715 --> ..................................................
FD557197 --> TTTTACTTAAAATTCATTTGTGA...........................
1251 - 1301
UN11187 --> AAATATGAAAGAAGGAAAAAGAAAATATGGCAGAGTTAGATGTATAATGT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959639 <-- ..................................................
EV541893 <-- AAATATGAAAGAAGGAAAAAGAAAATATGGCAGAGTTAGATGTATAATGT
FD537713 <-- AAATATGAAAGAAGGAAAAAGAAAATATGGCAGAGTTAGATGTATAATGT
FD963287 --> ..................................................
FD541429 --> ..................................................
EV537715 --> ..................................................
FD557197 --> ..................................................
1301 - 1351
UN11187 --> AAATTATAAAACATATCAAAATGTAATATCTAAGATTAAAATTGGTTTTC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959639 <-- ..................................................
EV541893 <-- AAATTATAAAACATATCAAAATGTAATATCTAAGATTAAAATTGGTTTTC
FD537713 <-- A.................................................
FD963287 --> ..................................................
FD541429 --> ..................................................
EV537715 --> ..................................................
FD557197 --> ..................................................
1351 - 1401
UN11187 --> TTACAAAT
~~~~~~~~
FD959639 <-- ........
EV541893 <-- TTACAAAT
FD537713 <-- ........
FD963287 --> ........
FD541429 --> ........
EV537715 --> ........
FD557197 --> ........
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