RadishBase

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Alignment for radish unigene UN11279

               1      -     51
UN11279        --> GGAAGACAAAACCGTTTCAATACTATCTCTCTCTCATCATCATCAATCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531661       <-- ..................................................
EW728127       <-- ..................................................
EX768966       <-- ..................................................
EX760379       <-- ..................................................
EV574274       <-- ..................................................
EY943903       <-- ..................................................
FD538686       <-- ..................................................
EX761065       <-- ..................................................
FD943456       <-- ..................................................
EX774941       <-- ..................................................
FD574917       <-- ..................................................
EY916030       --> GGAAGACAAAACCGTTTCAATACTATCTCTCTCTCATCATCATCAATCAC
FD544198       --> .................................ggATCATCATCAATCAC
EX749639       --> ....................................ggATCATCAATCAC
EY948146       --> ....................................ggATCATCAATCAC
EX765173       --> ..................................................
FD532060       --> ..................................................
FD560512       --> ..................................................
EV527890       --> ..................................................
EV527405       --> ..................................................
EX756603       --> ..................................................
FD542680       --> ..................................................
EX895683       --> ..................................................
FD571002       --> ..................................................
EX747110       --> ..................................................
EV569826       --> ..................................................
EX770799       --> ..................................................

               51     -    101
UN11279        --> TACTACAAGATCTCCTCTGTTTTTTTTT---CTTCTTCTCCC-AATCGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531661       <-- ..................................................
EW728127       <-- ..................................................
EX768966       <-- ..................................................
EX760379       <-- ..................................................
EV574274       <-- ..................................................
EY943903       <-- ..................................................
FD538686       <-- ..................................................
EX761065       <-- ..................................................
FD943456       <-- ..................................................
EX774941       <-- ..................................................
FD574917       <-- ..................................................
EY916030       --> TACTACAAGATCTC-TCTGGTTTTTTTT---CTTCTTCTCCC-AATCGTC
FD544198       --> TACTACAAGATCTCCTCTGTTTTTTTTTTTGCTTCTTCTCCC-AATCGTC
EX749639       --> TACTACAAGATCTCCTCTGTTTTTTTTT---GTTCTTCTCCCCAATCGTC
EY948146       --> TACTACAAGATCTCCTCTGTTTTTTTGT---TTCCTTCTCCCCAATCGTC
EX765173       --> ...................TTTTTTTTT---CTTCTTCTCCC-AATCGTC
FD532060       --> ...................TTTTTTTTT---GTTCTTCTCCCCAATCGTC
FD560512       --> ...................TTTTTTTTC---CTTCTTCTCCC-AATCGTC
EV527890       --> ...............................CTTCTTCTCCC-AATCGTC
EV527405       --> .................................gggTCTCCC-AATCGTC
EX756603       --> ..................................ggctcCCC-AATCGTC
FD542680       --> ..........................................ggATCGTC
EX895683       --> ..................................................
FD571002       --> ..................................................
EX747110       --> ..................................................
EV569826       --> ..................................................
EX770799       --> ..................................................

               101    -    151
UN11279        --> ATTTGTTAGGTGGCTAAAGATGAACGACGCAGATGTGTCCAGACAGATCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531661       <-- .........................GACGCAGATGTCTCCAGACAGATCC
EW728127       <-- ..................................................
EX768966       <-- ..................................................
EX760379       <-- ..................................................
EV574274       <-- ..................................................
EY943903       <-- ..................................................
FD538686       <-- ..................................................
EX761065       <-- ..................................................
FD943456       <-- ..................................................
EX774941       <-- ..................................................
FD574917       <-- ..................................................
EY916030       --> ATTTGTTAGGTGGCTAAAGATGAACGACGCAGATGTGTCCAGACAGATCC
FD544198       --> ATTTGTTAGGTGGCTAAAGATGAACGACGCAGATGTGTCCAGACAGATCC
EX749639       --> ATTTGTTAGGTGGCTAAAGATGAACGACGCAGATGTGTCCAGACAGATCC
EY948146       --> ATTTGTTAGGTGGCTAAAGATGAACGACGCAGATGTGTCCAGA----TCC
EX765173       --> ATTTGTTAGGCGGCTAAAGATGAACGACGCAGATGTGTCCAGACAGATCC
FD532060       --> ATTTGTTAGGTGGCTAAAGATGAACGACGCAGATGTGTCCAGACAGATCC
FD560512       --> ATTTGTTAGGTGGCTAAAGATGAACGACGCAGATGTGTCCAGACAGATCT
EV527890       --> ATTTGTTAGGTGGCTAAAGATGAACGACGCAGATGTCTCCAGACAGATCC
EV527405       --> ATTTGTTAGGTGGCTAAAGATGAACGACGCAGATGTCTCCAGACAGATCC
EX756603       --> ATTTGTTAGGTGGCTAAAGATGAACGACGCAGATGTGTCTAGACAGATCC
FD542680       --> ATTTGTTAGGTGGCTAAAGATGAACGACGCAGATGTGTCTAGACAGATCC
EX895683       --> .....ggAGGTGGCTAAAGATGAACGACGCAGATGTGTCCAGACAGATCC
FD571002       --> ......................................ggAGACAGATCC
EX747110       --> ..................................................
EV569826       --> ..................................................
EX770799       --> ..................................................

               151    -    201
UN11279        --> AGCAGATGGTGAGGTTTATCCGCCAGGAAGCCGAAGAAAAGGCCAATGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531661       <-- AGCAGATGGTGAGGTTTATCCGCCAGGAAGCCGAAGAAAAGGCCAATGAG
EW728127       <-- ...................................GAAAAGGCCAATGAG
EX768966       <-- ...................................GAAAAGGCCAATGAG
EX760379       <-- ....................................AAAAGGCCAATGAG
EV574274       <-- .....................................AAAGGCCAATGAG
EY943903       <-- .......................................AGGCCAATGAG
FD538686       <-- ..................................................
EX761065       <-- ..................................................
FD943456       <-- ..................................................
EX774941       <-- ..................................................
FD574917       <-- ..................................................
EY916030       --> AGCAGATGGTGAGGTTTATCCGCCAGGAAGCCGAAGAAAAGGCCAATGAG
FD544198       --> AGCAGATGGTGAGGTTTATCCGCCAGGAAGCCGAGGAAAAGGCCAATGAG
EX749639       --> AGCAGATGGTGAGGTTTATCCGCCAGGAAGCCGAAGAAAAGGCCAATGAG
EY948146       --> AGCAGATGGTGAGGTTTATCCGCCAGGAAGCCGAAGAAAAGGCCAATGAG
EX765173       --> AGCAGATGGTGAGGTTTATCCGCCAGGAAGCCGAAGAAAAGGCCAATGAG
FD532060       --> AGCAGATGGTGAGGTTTATCCGCCAGGAAGCCGAAGAAAAGGCCAATGAG
FD560512       --> AACAGATGGTGAGGTTTATCCGCCAGGAAGCCGAAGAAAAGGCCAATGAG
EV527890       --> AGCAGATGGTGAGGTTTATCCGCCAGGAAGCCGAAGAAAAGGCCAATGAG
EV527405       --> AGCAGATGGTGAGGTTTATCCGCCAGGAAGCCGAAGAAAAGGCCAATGAG
EX756603       --> AGCAGATGGTGAGGTTTATCCGCCAGGAAGCCGAAGAAAAGGCCAATGAG
FD542680       --> AGCAGATGGTGAGGTTTATCCGCCAGGAAGCCGAAGAAAAGGCCAATGAG
EX895683       --> AGCAGATGGTGAGGTTTATCCGCCAGGAAGCCGAAGAAAAGGCCAATGAG
FD571002       --> AGCAGATGGTGAGGTTTATCCGCCAGGAAGCCGAAGAAAAGGCCAATGAG
EX747110       --> ..................................................
EV569826       --> ..................................................
EX770799       --> ..................................................

               201    -    251
UN11279        --> ATCTCCGTCTCCGCTGAAGAAGAATTCAACATAGAGAAGTTGCAGCTGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531661       <-- ATCTCCGTCTCCGCTGAAGAAGAATTCAACATTGAGAAGTTGCAGCTGGT  Raphanus raphanistrum subsp. maritimus
EW728127       <-- ATCTCTGTCTCCGCTGAAGAAGAATTCAACATAGAGAAGTTGCAGTTGGT  Raphanus sativus cv Early Scarlet Globe
EX768966       <-- ATCTCCGTCTCCGCTGAAGAAGAATTCAACATAGAGAAGTTGCAG-TTGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX760379       <-- ATCTCTGTCTCCGCTGAAGAAGAATTCAACATAGAGAAGTTGCAGCTG-T  Raphanus raphanistrum subsp. raphanistrum (MS)
EV574274       <-- ATCTCTGTCTCCGCTGAAGAAGAATTCAACATTGAGAAGTTGCAGCTGGT  Raphanus raphanistrum subsp. landra
EY943903       <-- ATCTCCGTCTCCGCTGAAGAAGAATTCAACATTGAAAAGTTGCAGTTGGT  Raphanus sativus cv Rat-Tail Radish #3870
FD538686       <-- .....................GAATTCAACATAGAGAAGTTGCAGCTGGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX761065       <-- ..............................................gGGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD943456       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX774941       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD574917       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY916030       --> ATCTCCGTCTCCGCTGAAGAAGAATTCAACATAGAGAAGTTGCAGTTGGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD544198       --> ATCTCCGTCTCCGCTGAAGAAGAATTCAACATAGAGAAGTTGCAGTTGGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX749639       --> ATCTCCGTCTCCGCTGAAGAAGAATTCAACATTGAGAAGTTGCAGCTGGT  Raphanus raphanistrum subsp. maritimus
EY948146       --> ATCTCCGTCTCCGCTGAAGAAGAATTCAACATTGAAAAGTTGCAGTTGGT  Raphanus sativus cv Rat-Tail Radish #3870
EX765173       --> ATCTCCGTCTCCGCTGAAGAAGAATTCAACATAGAGAAGTTGCAGTTGGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD532060       --> ATCTCCGTCTCCGCTGAAGAAGAATTCAACATTGAGAAGTTGCAGCTGGT  Raphanus raphanistrum subsp. maritimus
FD560512       --> ATCTCCGTCTCCGCTGAAGAAGAATTCAACATAGAGAAGTTGCAGCTTGT  Raphanus sativus var. oleiformis
EV527890       --> ATCTCCGTCTCCGCTGAAGAAGAATTCAACATTGAGAAGTTGCAGCTGGT  Raphanus raphanistrum subsp. maritimus
EV527405       --> ATCTCCGTCTCCGCTGAAGAAGAATTCAACATTGAGAAGTTGCAGCTGGT  Raphanus raphanistrum subsp. maritimus
EX756603       --> ATCTCCGTCTCCGCTGAAGAAGAATTCAACATAGAGAAGTTGCAGCTGGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD542680       --> ATCTCCGTCTCCGCTGAAGAAGAATTCAACATAGAGAAGTTGCAGCTGGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX895683       --> ATCTCCGTCTCCGCTGAAGAAGAATTCAACATAGAGAAGTTGCAGTTGGT  Raphanus sativus cv Early Scarlet Globe
FD571002       --> ATCTCCGTCTCCGCTGAAGAAGAATTCAACATAGAGAAGTTGCAGTTGGT  Raphanus sativus cv Early Scarlet Globe
EX747110       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV569826       --> ..................................................  Raphanus raphanistrum subsp. landra
EX770799       --> ..................................................  Raphanus raphanistrum subsp. landra

               251    -    301
UN11279        --> CGAGGCAGAGAAGAAGAAGATTAGACAGGAGTATGAGAAGAAGGAGAAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531661       <-- CGAGGCAGAGAAGAAGAAGATTAGACAGGAGTATGGGAAGAAGGAGAAGC  Raphanus raphanistrum subsp. maritimus
EW728127       <-- CGAGGCAGAGAAGAAGAAGATTAGACAAGAGTATGAGAAGAAGGAGAAGC  Raphanus sativus cv Early Scarlet Globe
EX768966       <-- CGAGGCAGAGAAGAAGAAGATCAGACAGGAGTATGAGAAGAAGGAGAAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX760379       <-- CGAGGCAGAGAAGAAGAAGATTAGACAGGAGTATGAGAAGAAGGAGAAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV574274       <-- CGAGGCAGAGAAGAAGAAGATTAGACAGGAGTATGAGAAGAAGGAGAAGC  Raphanus raphanistrum subsp. landra
EY943903       <-- CGAGGCAGAGAAGAAGAAGATTAGACAGGAGTATGAGAAGAAGGAGAAGC  Raphanus sativus cv Rat-Tail Radish #3870
FD538686       <-- CGAGGCAGAGAAGAAGAAGATTAGACAGGAGTATGAGAAGAAGGAGAAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX761065       <-- CGAGGCAGAGAAGAAGAAGATTAGACAAGAGTATGAGAAGAAGGAGAAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD943456       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX774941       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD574917       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY916030       --> CGAAGCAGAGAAGAAGAAGATCAGACAGGAGTATGAGAAGAAGGAGAAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD544198       --> CGAGGCAGAGAAGAAGAAGATTAGACAAGAGTATGAGAAGAAGGAGAAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX749639       --> CGAGGCAGAGAAGAAGAAGATTAGACAGGAGTATGAGAAGAAGGAGAAGC  Raphanus raphanistrum subsp. maritimus
EY948146       --> CGAGGCAGAGAAGAAGAAGATTAGACAGGAGTATGAGAAGAAGGAGAAGC  Raphanus sativus cv Rat-Tail Radish #3870
EX765173       --> CGAGGCAGAGAAGAAGAAGATCAGACAGGAGTATGAGAAGAAGGAGAAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD532060       --> CGAGGCAGAGAAGAAGAAGATTAGACAGGAGTATGAGAAGAAGGAGAAGC  Raphanus raphanistrum subsp. maritimus
FD560512       --> CGAGGCAGAGAAGAAGAAGATTAGACAGGAGTATGAGAAGAAGGAGAAGC  Raphanus sativus var. oleiformis
EV527890       --> CGAGGCAGAGAAGAAGAAGATTAGACAGGAGTATGAGAAGAAGGAGAAGC  Raphanus raphanistrum subsp. maritimus
EV527405       --> CGAGGCAGAGAAGAAGAAGATTAGACAGGAGTATGGGAAGAAGGAGAAGC  Raphanus raphanistrum subsp. maritimus
EX756603       --> CGAGGCAGAGAAGAAGAAGATTAGACAGGAGTATGAGAAGAAGGAGAAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD542680       --> CGAGGCAGAGAAGAAGAAGATTAGACAGGAGTATGAGAAGAAGGAGAAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX895683       --> CGAGGCAGAGAAGAAGAAGATTAGACAAGAGTATGAGAAGAAGGAGAAGC  Raphanus sativus cv Early Scarlet Globe
FD571002       --> CGAGGCAGAGAAGAAGAAGATTAGACAAGAGTATGAGAAGAAGGAGAAGC  Raphanus sativus cv Early Scarlet Globe
EX747110       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV569826       --> ..................................................  Raphanus raphanistrum subsp. landra
EX770799       --> ..................................................  Raphanus raphanistrum subsp. landra

               301    -    351
UN11279        --> AGGTCGATGTCCGAAGGAAGATTGATTACTCAATGCAATTGAACGCATCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531661       <-- AGGTCGATGTCCGAAGGAAGATTGATTACTCAATGCAATTGAACGCATCG  Raphanus raphanistrum subsp. maritimus
EW728127       <-- AAGTCGATGTCCGAAGGAAGATTGATTACTCAATGCAATTGAACGCATCG  Raphanus sativus cv Early Scarlet Globe
EX768966       <-- AGGTCGATGTCCGAAGGAAAATTGATTACTCAATGCAATTGAACGCATCG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX760379       <-- AGGTCGATGTCCGAAGGAAGATTGATTACTCAATGCAATTGAACGCATCG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV574274       <-- AGGTCGATGTCCGAAGGAAGATTGATTACTCAATGCAATTGAACGCATCG  Raphanus raphanistrum subsp. landra
EY943903       <-- AGGTCGATGTCCGAAGGAAGATTGACTACTCAATGCAATTGAACGCATCG  Raphanus sativus cv Rat-Tail Radish #3870
FD538686       <-- AGGTCGATGTCCGAAGGAAGATTGATTACTCAATGCAATTGAACGCATCG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX761065       <-- AAGTCGATGTCCGAAGGAAGATTGATTACTCAATGCAATTGAACGCATCG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD943456       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX774941       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD574917       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY916030       --> AGGTCGATGTCCGAAGGAAAATTGATTACTCAATGCAATTGAACGCATCG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD544198       --> AAGTCGATGTCCGAAGGAAGATTGATTACTCAATGCAATTGAACGCATCG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX749639       --> AGGTCGATGTCCGAAGGAAGATTGATTACTCAATGCAATTGAACGCATCG  Raphanus raphanistrum subsp. maritimus
EY948146       --> AGGTCGATGTCCGAAGGAAGATTGACTACTCAATGCAATTGAACGCATCG  Raphanus sativus cv Rat-Tail Radish #3870
EX765173       --> AGGTCGATGTCCGAAGGAAAATTGATTACTCAATGCAATTGAACGCATCG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD532060       --> AGGTCGATGTCCGAAGGAAGATTGATTACTCAATGCAATTGAACGCATCG  Raphanus raphanistrum subsp. maritimus
FD560512       --> AGGTCGATGTCCGAAGGAAGATTGATTACTCAATGCAATTGAACGCATCG  Raphanus sativus var. oleiformis
EV527890       --> AGGTCGATGTCCGAAGGAAGATTGATTACTCAATGCAATTGAACGCATCG  Raphanus raphanistrum subsp. maritimus
EV527405       --> AGGTCGATGTCCGAAGGAAGATTGATTACTCAATGCAATTGAACGCATCG  Raphanus raphanistrum subsp. maritimus
EX756603       --> AGGTCGATGTCCGAAGGAAGATTGATTACTCAATGCAATTGAACGCATCG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD542680       --> AGGTCGATGTCCGAAGGAAGATTGATTACTCAATGCAATTGAACGCATCG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX895683       --> AAGTCGATGTCCGAAGGAAGATTGATTACTCAATGCAATTGAACGCATCG  Raphanus sativus cv Early Scarlet Globe
FD571002       --> AAGTCGATGTCCGAAGGAAGATTGATTACTCAATGCAATTGAACGCATCG  Raphanus sativus cv Early Scarlet Globe
EX747110       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV569826       --> ..................................................  Raphanus raphanistrum subsp. landra
EX770799       --> ..................................................  Raphanus raphanistrum subsp. landra

               351    -    401
UN11279        --> AGGATCAAAGTTCTGCAAGCTCAAGATGACATTGTCAATGCAATGAAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531661       <-- AGGATCAAAGTTCTGCAAGCTCAAGATGACATTGTCAATGCAATGAAAGA  Raphanus raphanistrum subsp. maritimus
EW728127       <-- AGGATCAAAGTTCTGCAAGCACAAGATGACATTGTCAATGCGATGAAAGA  Raphanus sativus cv Early Scarlet Globe
EX768966       <-- AGGATCAAAGTTCTGCAAGCTCAAGATGACATTGTCAATGCAATGAAAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX760379       <-- AGGATCAAAGTTCTGCAAGCTCAAGATGACATTGTCAATGCAATGAAAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV574274       <-- AGGATCAAAGTTCTGCAAGCACAAGATGACATTGTCAATGCGATGAAAGA  Raphanus raphanistrum subsp. landra
EY943903       <-- AGGATCAAAGTTCTGCAAGCTCAAGATGACATTGTCAATGCAATGAAAGA  Raphanus sativus cv Rat-Tail Radish #3870
FD538686       <-- AGGATCAAAGTTCTGCAAGCTCAAGATGACATTGTCAATGCAATGAAAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX761065       <-- AGGATCAAAGTTCTGCAAGCGCAAGATGACATTGTCAATGCAATGAAAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD943456       <-- AGGATCAAAGTTCTGCAAGCACAAGATGACATTGTCAATGCGATGAAAGA  Raphanus sativus cv Early Scarlet Globe
EX774941       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD574917       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY916030       --> AGGATCAAAGTTCTGCAAGCTCAAGATGACATTGTCAATGCAATGAAAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD544198       --> AGGATCAAAGTTCTGCAAGCGCAAGATGACATTGTCAATGCAATGAAAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX749639       --> AGGATCAAAGTTCTGCAAGCTCAAGATGACATTGTCAATGCAATGAAAGA  Raphanus raphanistrum subsp. maritimus
EY948146       --> AGGATCAAAGTTCTGCAAGCTCAAGATGACATTGTCAATGCAATGAAAGA  Raphanus sativus cv Rat-Tail Radish #3870
EX765173       --> AGGATCAAAGTTCTGCAAGCTCAAGATGACATTGTCAATGCAATGAAAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD532060       --> AGGATCAAAGTTCTGCAAGCTCAAGATGACATTGTCAATGCAATGAAAGA  Raphanus raphanistrum subsp. maritimus
FD560512       --> AGGATCAAAGTTCTGCAAGCTCAAGATGACATTGTCAATGCAATGAAAGA  Raphanus sativus var. oleiformis
EV527890       --> AGGATCAAAGTTCTGCAAGCTCAAGATGACATTGTCAATGCAATGAAAGA  Raphanus raphanistrum subsp. maritimus
EV527405       --> AGGATCAAAGTTCTGCAAGCTCAAGATGACATTGTCAATGCAATGAAAGA  Raphanus raphanistrum subsp. maritimus
EX756603       --> AGGATCAAAGTTCTGCAAGCTCAAGATGACATTGTCAATGCAATGAAAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD542680       --> AGGATCAAAGTTCTGCAAGCTCAAGATGACATTGTCAATGCAATGAAAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX895683       --> AGGATCAAAGTTCTGCGAGGACAAGATGACATTGTCAATGCGATGAAAGA  Raphanus sativus cv Early Scarlet Globe
FD571002       --> AGGATCAAAGTTCTGCAAGCACAAGATGACATTGTCAATGCGATGAAAGA  Raphanus sativus cv Early Scarlet Globe
EX747110       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV569826       --> ..................................................  Raphanus raphanistrum subsp. landra
EX770799       --> ..................................................  Raphanus raphanistrum subsp. landra

               401    -    451
UN11279        --> AGAGGCTGCAAAGCAACTCCTCAAAGTCAGCGAACATGGCTTCTTCAACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531661       <-- AGAGGCTGCAAAGCAACTCCTCAAAGTCAGCGAACATGGCTTCTTCAACC
EW728127       <-- AGAGGCTGCAAAGCAACTCCTCAAAGTCAGCGAACATGTCTTCTTCAACC
EX768966       <-- AGAGGCTGCAAAGCAACTCCTCAAAGTCAGCGAACATGGCTTCTTCAACC
EX760379       <-- AGAGGCTGCAAAGCAACTCCTCAAAGTCAGCGAACATGGCTTCTTCAACC
EV574274       <-- AGAGGCTGCAAAGCAACTCCTCAAAGTCAGCGAACATGGCTTCTTCAACC
EY943903       <-- AGAGGCTGCAAAGCAACTCCTCAAAGTCAGCGAACATGGCTTCTTCAACC
FD538686       <-- AGAGGCTGCAAAGCAACTCCTCAAAGTCAGCGAACATGGCTTCTTCAACC
EX761065       <-- AGAGGCTGCAAAGCAACTCCTCAAAGTCAGCGAACATGGCTTCTTCAACC
FD943456       <-- AGAGGCTGCAAAGCAACTCCTCAAAGTCAGCGAACATGGCTTCTTCAACC
EX774941       <-- ..................................................
FD574917       <-- ..................................................
EY916030       --> AGAGGCTGCAAAGCAACTCCTCAAAGTCAGCGAACATGGCTTCTTCAACC
FD544198       --> AGAGGCTGCAAAGCAACTCCTCAAAGTCAGCGAACATGGCTTCTTCAACC
EX749639       --> AGAGGCTGCAAAGCAACTCCTCAAAGTCAGCGAACATGGCTTCTTCAACC
EY948146       --> AGAGGCTGCAAAGCAACTCCTCAAAGTCAGCGAACATGGCTTCTTCAACC
EX765173       --> AGAGGCTGCAAAGCAACTCCTCAAAGTCAGCGAACATGGCTTCTTCAACC
FD532060       --> AGAGGCTGCAAAGCAACTCCTCAAAGTCAGCGAACATGGCTTCTTCAACC
FD560512       --> AGAAGCTGCAAAGCAACTCCTCAAAGTCAGCGAACATGGCTTCTTCAACC
EV527890       --> AGAGGCTGCAAAGCAACTCCTCAAAGTCAGCGAACATGGCTTCTTCAACC
EV527405       --> AGAGGCTGCAAAGCAACTCCTCAAAGTCAGCGAACATGGCTTCTTCAACC
EX756603       --> AGAGGCTGCAAAGCAACTCCTCAAAGTCAGCGAACATGGCTTCTTCAACC
FD542680       --> AGAGGCTGCAAAGCAACTCCTCAAAGTCAGCGAACATGGCTTCTTCAACC
EX895683       --> AGAGGCTGCAAAGCAACTCCTCAAAGTCAGCGAACATGGCTTCTTCAACC
FD571002       --> AGAGGCTGCAAAGCAACTCCTCAAAGTCGGCGAACATGGCTTCTTCAACC
EX747110       --> ..................................................
EV569826       --> ..................................................
EX770799       --> ..................................................

               451    -    501
UN11279        --> ATCATCACCATCAGTACAAACATCTCTTGAAGCATCTCATTGTTCAGTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531661       <-- ATCATCACCATCAGTACAAACATCTCTTGAAGCATCTCATTGTTCAGTGT
EW728127       <-- ATCATCACCATCAGTACAAACATCTCTTGAAGCATCTCATTGTTCAGTGT
EX768966       <-- ATCATCACCATCAGTACAAACATCTCTTGAAGCATCCCATTGTTCAGTGT
EX760379       <-- ATCATCACCATCAGTACAAACATCTCTTGAAGCATCTCATTGTTCAGTGT
EV574274       <-- ATCATCACCATCAGTACAAACATCTCTTGAAGCATCTCATTGTTCAGTGT
EY943903       <-- ATCATCACCATCAGTACAAACATCTCTTGAAGCATCTCATTGCTCAGTGT
FD538686       <-- ATCATCACCATCAGTACAAACATCTCTTGAAGCATCTCATTGTTCAGTGT
EX761065       <-- ATCATCACCATCAGTACAAACATCTCTTGAAGCATCTCATTGTTCAGTGT
FD943456       <-- ATCATCACCATCAGTACAAACATCTCTTGAAGCATCTCATTGTTCAGTGT
EX774941       <-- .......................................gTGTGCAGTGT
FD574917       <-- ..................................................
EY916030       --> ATCATCACCATCAGTACAAACATCTCTTGAAGCATCTCATTGTTCAGCGT
FD544198       --> ATCATCACCATCAGTACAAACATCTCTTGAAGCATCTCATTGTTCAGTGT
EX749639       --> ATCATCACCATCAGTACAAACATCTCTTGAAGCATCTCATTGTTCAGTGT
EY948146       --> ATCATCACCATCAGTACAAACATCTCTTGAAGCATCTCATTGCTCAGTGT
EX765173       --> ATCATCACCATCAGTACAAACATCTCTTGAAGCATCCCATTGTTCAGTGT
FD532060       --> ATCATCACCATCAGTACAAACATCTCTTGAAGCATCTCATTGTTCAGTGT
FD560512       --> ATCATCACCATCAGTACAAACATCTCTTGAAGCATCTCATTGTTCAGTGT
EV527890       --> ATCATCACCATCAGTACAAACATCTCTTGAAGCATCTCATTGTTCAGTGT
EV527405       --> ATCATCACCATCAGTACAAACATCTCTTGAAGCATCTCATTGTTCAGTGT
EX756603       --> ATCATCACCATCAGTACAAACATCTCTTGAAGCATCTCATTGTTCAGTGT
FD542680       --> ATCATCACCATCAGTACAAACATCTCTTGAAGCATCTCATTGTTCAGTGT
EX895683       --> ATCATCACCATCAGTACAAACATCTCTTGAAGCATCTCATTGTTCAGTGT
FD571002       --> ATCATCACCATCAGTACAAACATCTCTTGAAGCATCTCATTGTTCAGTGT
EX747110       --> ........................gCTTGAAGCATCTCATTGTTCAGTGT
EV569826       --> ..............................AGCATCTCATTGTTCAGTGT
EX770799       --> .......................................gTGTGCAGTGT

               501    -    551
UN11279        --> TTGCTTAGACTGAAAGAGCCTTCAGTGTTACTGCGTTGTCGCCAAGAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531661       <-- TTGCTTAGACTGAAAGAGCCTTCAGTGTTACTGCGTTGTCGCCAAGAAGA
EW728127       <-- TTGCTTAGACTGAAAGAGCCTTCAGTGTTACTGCGTTGTCGCCAAGAAGA
EX768966       <-- TTGCTTAGACTGAAAGAGCCTTCAGTGTTACTGCGTTGTCGCCAAGAAGA
EX760379       <-- TTGCTTAGACTGAAAGAGCCTTCAGT-TTACTGCGTTGTCGCCAAGAAGA
EV574274       <-- TTGCTTAGACTGAAAGGGCCTTCAGTGTTACTGCGTTGTCGCCAAGAAGA
EY943903       <-- TTGCTTAGACTGAAAGAGCCTTCAGTGTTACTGCGTTGTCGCCAAGAAGA
FD538686       <-- TTGCTTAGACTGAAAGAGCCTTCAGTGTTACTGCGTTGTCGCCAAGAAGA
EX761065       <-- TTGCTTAGACTGAAAGAGCCTTCAGTGTTACTGCGTTGTCGCCAAGAAGA
FD943456       <-- TTGCTTAGACTGAAAGAGCCTTCAGTGTTACTGCGTTGTCGCCAAGAAGA
EX774941       <-- TTGCTTAGACTGAAAGAGCCTTCAGTGTTACTGCTTTGTCGCCAAGAAGA
FD574917       <-- ..................................................
EY916030       --> TTGCTTAGACTGAAAGAGCCTTCGGTGTTACTGCGTTGTCGCCAAGAAGA
FD544198       --> TTGCTTAGACTGAAAGAGCCTTCAGTGTTACTGCGTTGTCGCCAAGAAGA
EX749639       --> TTGCTTAGACTGAAAGAGCCTTCAGTGTTACTGCGTTGTCGCCAAGAAGA
EY948146       --> TTGCTTAGACTGAAAGAGCCTTCAGTGTTACTGCGTTGTCGCCAAGAAGA
EX765173       --> TTGCTTAGACTGAAAGAGCCTTCAGTGTTACTGCGTTGTCGCCAAGAAGA
FD532060       --> TTGCTTAGACTGAAAGAGCCTTCAGTGTTACTGCGTTGTCGCCAAGAAGA
FD560512       --> TTGCCTAGACTGAAAGAGCCTTCAGTGTTACTGCGTTGTCGCCAAGAAGA
EV527890       --> TTGCTTAGACTGAAAGAGCCTTCAGTGTTACTGCGTTGTCGCCAAGAAGA
EV527405       --> TTGCTTAGACTGAAAGAGCCTTCAGTGTTACTGCGTTGTCGCCAAGAAGA
EX756603       --> TTGCTTAGACTGAAAGAGCCTTCAGT-TTACTGCGTTGTCGCCAAGAAGA
FD542680       --> TTGCTTAGACTGAAAGAGCCTTCAGTGTTACTGCGTTGTCGCCAAGAAGA
EX895683       --> TTGCTTAGACTGAAAGAGCCTTCAGTGTTACTGCGTTGTCGCCAAGAAGA
FD571002       --> TTGCTTAGACTGAAAGAGCCTTCAGTGTTACTGCGTTGTCGCCAAGAAGA
EX747110       --> TTGCTTAGACTGAAAGAGCCTTCAGTGTTACTGCGTTGTCGCCAAGAAGA
EV569826       --> TTGCTTAGACTGAAAGGGCCTTCAGTGTTACTGCGTTGTCGCCAAGAAGA
EX770799       --> TTGCTTAGACTGAAAGAGCCTTCAGTGTTACTGCTTTGTCGCCAAGAAGA

               551    -    601
UN11279        --> CCTTCACATAGTGGAGTCGATGCTT-GACGATGCAACTGAAGAATACTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531661       <-- CCTTCACATAGTGGAGTCGATGCTT-GACGATGCAACTGAAGAATACTGC
EW728127       <-- CCTTCACATAGTGGAGTCGATGCTT-GACGATGCAACTGAAGAATACTGC
EX768966       <-- CCTTCACATAGTGGAGTCGATGCTT-GACGATGCAACTGAAGAATACTGC
EX760379       <-- CCTTCACATAGTGGAGTCGATGCTT-GACGATGCAACTGAAGAATACTGC
EV574274       <-- CCTTCACATAGTGGAGTCGATGCTT-GACGATGCAACTGAAGAATACTGC
EY943903       <-- CCTTCACATAGTGGAGTCGATGCTT-GACGATGCAACTGAAGAATACTGC
FD538686       <-- CCTTCACATAGTGGAGTCGATGCTC-GACGATGCAACTGAAGAATACTGC
EX761065       <-- CCTTCACATAGTGGAGTCGATGCTT-GACGATGCAACTGAAGAATACTGC
FD943456       <-- CCTTCACATAGTGGAGTCGATGCTT-GACGATGCAACTGAAGAATACTGC
EX774941       <-- CCTTCACATAGTGGAGTCGATGCTT-GACGATGCAACTGAAGAATACTGC
FD574917       <-- ..................................................
EY916030       --> CCTTCACATAGTGGAGTCGATGCTT-GACGATGCAACTGAAGAATACTGC
FD544198       --> CCTTCACATAGTGGAGTCGATGCTT-GACGATGCAACTGAAGAATACTGC
EX749639       --> CCTTCACATAGTGGAGTCGATGCTT-GACGATGCAACTGAAGAATACTGC
EY948146       --> CCTTCACATAGTGGAGTCGATGCTT-GACGATGCAACTGAAGAATACTGC
EX765173       --> CCTTCACATAGTGGAGTCGATGCTT-GACGATGCAACTGAAGAATACTGC
FD532060       --> CCTTCACATAGTGGAGTCGATGCTT-GACGATGCAACTGAAGAATACTGC
FD560512       --> CCTTCACATAGTGGAGTCGATGCTT-GACGATGCAACTGAAGAATACTGC
EV527890       --> CCTTCACATAGTGGAGTCGATGCTT-GACGATGCAACTGAAGAATACTGC
EV527405       --> CCTTCACATAGTGGAGTCGATGCTT-GACGATGCAACTGAAGAATACTGC
EX756603       --> CCTTCACATAGTGGAGTCGATGCTT-GACGATGCAACTGAAGAATACTGC
FD542680       --> CCTTCACATAGTGGAGTCGATGCTC-GACGATGCAACTGAAGAATACTGC
EX895683       --> CCTTCACATAGTGGAGTCGATGCTT-GACGATGCAACTGAAGAATACTGC
FD571002       --> CCTTCACATAGTGGAGTCGATGCTT-GACGATGCAACTGAAGAATACTGC
EX747110       --> CCTTCACATAGTGGAGTCGATGCTT-GACGATGCAGCTGAAGAATACTGC
EV569826       --> CCTTCACATAGTGGAGTCGATGCTTTGACGATGCAACTGAAGAATACTGC
EX770799       --> CCTTCACATAGTGGAGTCGATGCTT-GACGATGCAACTGAAGAATACTGC

               601    -    651
UN11279        --> GAGAAAGCAAAGGTTCATGCTCCTGAGATTATAGTTGACAAGGACATTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531661       <-- GAGAAAGCAAAGGTTCATGCTCCTGAGATTATAGTTGACAAGGACATTTT
EW728127       <-- GAGAAAGCAAAGGTTCATGCTCCTGAGATTATAGTTGACAAGGACATTTT
EX768966       <-- GAGAAAGCAAAGGTTCATGCTCCTGAGATCATAGTTGACAAGGAGATTTT
EX760379       <-- GAGAAAGCAAAGGTTCATGCTCCTGAGATTATAGTTGACGAGGACATTTT
EV574274       <-- GAGAAAGCAAAGGTTCATGCTCCTGAGATTATAGTTGACAAGCACATTTT
EY943903       <-- GAGAAAGCAAAGGTTCATGCTCCTGAGATTATAGTTGACAAGGACATTTT
FD538686       <-- GAGAAAGCAAAGGTTCATGCTCCTGAGATTATAGTTGACAAGGACATTTT
EX761065       <-- GAGAAAGCAAAGGTTCATGCTCCTGAGATTATAGTTGACAAGGACATTTT
FD943456       <-- GAGAAAGCAAAGGTTCATGCTCCTGAGATTATAGTTGACAAGGACATTTT
EX774941       <-- GAGAAAGCAAAGGTTCATGCTCCTGAGATTATAGTTGACAAGGACATTTT
FD574917       <-- ..................................................
EY916030       --> GAGAAAGC..........................................
FD544198       --> GAGAAAGCAAAGGTTCATGCTCCTGAGATTATAGTTGACAAGGACATTTT
EX749639       --> GAGAAAGCAAAGGTTCATGCTCCTGAGATTATAGTTGACAAGGACATTTT
EY948146       --> GAGAAAGCAAAGGTTCATGCTCCTGAGATTATAGTTGACAAAGACATTTT
EX765173       --> GAGAAAGCAAAGGTTCATGCTCCTGAGATCATAGTTGACAAGGAGATTTT
FD532060       --> GAGAAAGCAAAGGTTCATGCTCCTGAGATTATAGTTGACAAGGACATTTT
FD560512       --> GAGAAGGCAAAGGTTCATGCTCCTGAGATTATAGTTGACAAGGACATTTT
EV527890       --> GAGAAAGCAAAGGTTCATGCTCCTGAGATTATAGTTGACAAGGACATTTT
EV527405       --> GAGAAAGCAAAGGTTCATGCTCCTGAGATTATAGTTGACAAGGACATTTT
EX756603       --> GAGAAAGCAAAGGTTCATGCTCCTGAGATTATAGTTGACGAGGACATTTT
FD542680       --> GAGAAAGCAAAGGTTCATGCTCCTGAGATTATAGTTGACAAGGACATTTT
EX895683       --> GAGAAAGCAAAGGTTCATGCTCCTGAGATTATAGTTGACAAGGACATTTT
FD571002       --> GAGAAAGCAAAGGTTCATGCTCCTGAGATTATAGTTGACAAGGACATTTT
EX747110       --> GAGAAAGCAAAGGTTCATGCTCCTGAGATTATAGTTGACAAGGACATTTT
EV569826       --> GAGAAAGCAAAGGTTCATGCTCCTGAGATTATAGTTGACAAGCACATTTT
EX770799       --> GAGAAAGCAAAGGTTCATGCTCCTGAGATTATAGTTGACAAGGACATTTT

               651    -    701
UN11279        --> CCTT-CCTCCTGCTCCTTCCGAAGATGATCCTCATGCTCCTTTCTGTGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531661       <-- CCTT-CCTCCTGCTCCTTCCGAGGATGATCCTCATGCTCCTTTCTGTGCC  Raphanus raphanistrum subsp. maritimus
EW728127       <-- CCTT-CCTCCTGCTCCTTCCGAAGATGATCCTCATGCTCCTTTCTGTGCC  Raphanus sativus cv Early Scarlet Globe
EX768966       <-- CCTT-CCTCCTGCTCCTTCCGAAGATGATCCTCATGCTCCTTTCTGTGCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX760379       <-- CCTT-CCTCCTGCTCCTTCCGAAGATGATCCTCATGCTCCTTTCTGTGCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV574274       <-- CCTT-CCTCCTGCTCCTTCCGAAGATGATCCTCATGCTCCTTTCTGTGCT  Raphanus raphanistrum subsp. landra
EY943903       <-- CCTT-CCTCCTGCTCCTTCCGAAGATGATCCTCATGCTCCTTTCTGTGCT  Raphanus sativus cv Rat-Tail Radish #3870
FD538686       <-- CCTT-CCTCCTGCTCCTTCCGAAGATGATCCTCATGCTCCTTTCTGTGCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX761065       <-- CCTT-CCTCCTGCTCCTTCCGAAGATGATCCTCATGCTCCTTTCTGTGCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD943456       <-- CCTT-CCTCCTGCTCCTTCCGAAGATGATCCTCATGCTCCTTTCTGTGCC  Raphanus sativus cv Early Scarlet Globe
EX774941       <-- CCTT-CCTCCTGCTCCTTCCGAAGATGATCCTCATGCTCCTTTCTGTGCT  Raphanus raphanistrum subsp. landra
FD574917       <-- ..............................................TGCC  Raphanus sativus cv Early Scarlet Globe
EY916030       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD544198       --> CCTT-CCTCCTGCTCCTTCCGAAGATGATCCTCATGCTCCTTTCTGTGCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX749639       --> CCTT-CCTCCTGCTCCTTCCGAAGATGATCCTCATGCTCCTTTCTGTGCT  Raphanus raphanistrum subsp. maritimus
EY948146       --> CCTT-CCTCCTGCTCCTTCCGAAGATGATCCTCATGCTCCTTTCTGTGCT  Raphanus sativus cv Rat-Tail Radish #3870
EX765173       --> CCTT-CCTCCTGCTCCTTCCGAAGATGATCCTCATGCTCCTTTCTGTGCC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD532060       --> CCTT-CCTCCTGCTCCTTCCGAAGATGATCCTCATGCTCCTTTCTGTGCT  Raphanus raphanistrum subsp. maritimus
FD560512       --> CCTA-CCTCCTGCTCCTTCCGAAGATGATCCTCATGCTCCTTTCTGTGCT  Raphanus sativus var. oleiformis
EV527890       --> CCTT-CCTCCTGCTCCTTCCGAAGATGATCCTCATGCTCCTTTCTGTGCT  Raphanus raphanistrum subsp. maritimus
EV527405       --> CCTT-CCTCCTGCTCCTTCCGAGGATGATCCTCATGCTCCTTTCTGTGCC  Raphanus raphanistrum subsp. maritimus
EX756603       --> CCTT-CCTCCTGCTCCTTCCGAAGATGATCCTCATGCTCCTTTCTGTGCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD542680       --> CCTT-CCTCCTGCTCCTTCCGAAGATGATCCTCATGCTCCTTTCTGTGCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX895683       --> CCTT-CCTCCTGCTCCTTCCGAAGATGATCCTCATGCTCCT--CTGTGCC  Raphanus sativus cv Early Scarlet Globe
FD571002       --> CCTT-CCTCCTGCTCCTTCCGAAGATGATCCTCATGCTCCTTTCTGTGCC  Raphanus sativus cv Early Scarlet Globe
EX747110       --> CCTT-CCTCCTGCTCCTTCCGAGGATGATCCTCATGCTCCTTTCTGTGCC  Raphanus raphanistrum subsp. maritimus
EV569826       --> CCTTTCCTCCTGCTCCTTCCGAAGATGATCCTCATGCTCCTTTCTGTGCT  Raphanus raphanistrum subsp. landra
EX770799       --> CCTT-CCTCCTGCTCCTTCCGAAGATGATCCTCATGCTCCTTTCTGTGCT  Raphanus raphanistrum subsp. landra

               701    -    751
UN11279        --> GG-AGGAGTGGTGCTGGCTTCTCGTGATGGAAAAATCGTGTGTGAAAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531661       <-- GG-AGGAGTGGTGCTGGCTTCTCGTGATGGAAAAATCGTGTGTGAAAACA  Raphanus raphanistrum subsp. maritimus
EW728127       <-- GG-AGGAGTGGTGCTGGCTTCTCGCGATGGAAAAATCGTGTGTGAAAACA  Raphanus sativus cv Early Scarlet Globe
EX768966       <-- GG-AGGAGTGGTGCTGGCTTCTCGTGATGGAAAAATCGTGTGTGAAAACA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX760379       <-- GG-AGGAGTGGTGCTGGCTTCTCGTGATGGGAAAATCGTGTGTGAAAACA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV574274       <-- GG-AGGAGTGGTGCTGGCTTCTCGTGATGGGAAAATTGTGTGTGAAAACA  Raphanus raphanistrum subsp. landra
EY943903       <-- GG-AGGAGTGGTGCTGGCTTCTCGTGATGGGAAAATCGTGTGTGAAAACA  Raphanus sativus cv Rat-Tail Radish #3870
FD538686       <-- GG-AGGAGTGGTGCTGGCTTCTCGTGATGGGAAAATCGTGTGTGAAAACA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX761065       <-- GG-AGGAGTGGTGCTGGCTTCTCGTGATGGGAAAATTGTGTGTGAAAACA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD943456       <-- GG-AGGAGTGGTGCTGGCTTCTCGTGATGGAAAAATCGTGTGTGAAAACA  Raphanus sativus cv Early Scarlet Globe
EX774941       <-- GG-AGGAGTGGTGCTGGCTTCTCGTGATGGAAAAATCGTGTGTGAAAACA  Raphanus raphanistrum subsp. landra
FD574917       <-- GG-AGGAGTGGTGCGGGCTTCTCGTGATGGAAAAATCGTGTGTGAAAACA  Raphanus sativus cv Early Scarlet Globe
EY916030       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD544198       --> GG-AGGAGTGGTGCTGGCTTCTCGTGATGGGAAAATTGTGTGTGAAA-CA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX749639       --> GG-AGGAGTGGTGCTGGCTTCTCGTGATGGAAAAA...............  Raphanus raphanistrum subsp. maritimus
EY948146       --> GG-AGGAGTGGTGCTGGCTTCTCGTGATGGGAAAATCGTGTGTGAAA-CA  Raphanus sativus cv Rat-Tail Radish #3870
EX765173       --> GG-AGGAGTGGTGCTGGCTTCTCGTGATGGAAAAATCGTGTGTGAAA-CA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD532060       --> GG-AGGAGTGGTGCTGGCTTCTCGTGATGGAAAAATCGTGTGTGAAA-CA  Raphanus raphanistrum subsp. maritimus
FD560512       --> GG-AGGAGTGGTGCTGGCTTCTCGTGACGGGAAAATCGTGTGTGAAAACA  Raphanus sativus var. oleiformis
EV527890       --> GG-AGGAGTGGTGCTGGCTTCTCGTGATGGAAAAATCGTGTGTGAAAACA  Raphanus raphanistrum subsp. maritimus
EV527405       --> GG-AGGAGTGGTGCTGGCTTCTCGTGATGGAAAAATCGTGTGTGAAAACA  Raphanus raphanistrum subsp. maritimus
EX756603       --> GG-AGGAGTGGTGCTGGCTTCTCGTGATGGGAAAATCGTGTGTGAAA-CA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD542680       --> GG-AGGAGTGGTGCTGGCTTCTCGTGATGGGAAAATCGTGTGTGAAAACA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX895683       --> GG-AGGAGTGGTGCTGGCTTCTCGTGATGGAAAAA...............  Raphanus sativus cv Early Scarlet Globe
FD571002       --> GG-AGGAGTGGTGCTGGCTTCTCGTGATGGAAAAA...............  Raphanus sativus cv Early Scarlet Globe
EX747110       --> GG-AGGAGTGGTGCTGGCTTCTCGTGATGGAAAAATCGTGTGTGAAAACA  Raphanus raphanistrum subsp. maritimus
EV569826       --> GGGAGGAGTGGTGCTGGCTTCTCGTGATGGGAAAATTGTGTGTGAAAACA  Raphanus raphanistrum subsp. landra
EX770799       --> GG-AGGAGTGGTGCTGGCTTCTCGTGATGGAAAAATCGTGTGTGAAAACA  Raphanus raphanistrum subsp. landra

               751    -    801
UN11279        --> CTCTTGATGCGAGGTTGGAGGTCGCTTTCCGCAAGAAACTCCCTGAGATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531661       <-- CTCTTGATGCGAGGTTGGAGGTCGCTTTCCGCAAGAAACTCCCTGAGATT
EW728127       <-- CTCTTGATGCGAGGTTGGAGGTTGCTTTCCGCAAGAAACTCCCTGAGATT
EX768966       <-- CTCTTGATGCGAGGTTGGAGGTCGCTTTCCGCAAGAAACTCCCTGAGATT
EX760379       <-- CTCTTGATGCGAGGTTGGAGTTCGCTTTCCGCAAGAAACTCCCTGAGATT
EV574274       <-- CTCTTGATGCGAGGTTGGAGGTCGCTTTCCGCAAGAAACTCCCTGAGATT
EY943903       <-- CTCTTGATGCGAGGTTGGAGGTCGCTTTCCGCAAGAAACTCCCTGAGATT
FD538686       <-- CTCTTGATGCGAGGTTGGAGGTCGCTTTCCGCAAGAAACTCCCTGAGATT
EX761065       <-- CTCTTGATGCGAGGTTGGAGGTCGCTTTCCGCAAGAAACTCCCTGAGATT
FD943456       <-- CTCTTGATGCGAGGTTGGAGGTCGCTTTCCGCAAGAAACTCCCTGAGATT
EX774941       <-- CTCTTGATGCGAGGTTGGAGGTCGCTTTCCGCAAGAAACTCCCTGAGATT
FD574917       <-- CTCTTGATGGGAGGTTGGAGGTCGCTTTCCGCAAGAAACTCCCTGAGATT
EY916030       --> ..................................................
FD544198       --> CTCTTGATG.........................................
EX749639       --> ..................................................
EY948146       --> CTCTTGATGCGAGGTT..................................
EX765173       --> CTCTTGATGCGAGGTTGGAGGTCGCTTTCCGCA.................
FD532060       --> CTCTTGATGCGAGGTTGGAGGTCGCTTTCCGCAA-AAACTCCCTGAGATT
FD560512       --> CTCTTGATGCGAGGTTGGAGGTCGCTTTCCGCAAGAAACTCCCTGAGATT
EV527890       --> CTCTTGATGCGAGGTTGGAGGTCGCTTTCCGCAAGAAACTCCCTGAGATT
EV527405       --> CTCTTGATGCGAGGTTGGAGGTCGCTTTCCGCAAGAAACTCCCTGAGATT
EX756603       --> CTCTTGATGCGAGGT-GGAGTTCGCTTTCCGCAAGAA-CTCCCTGAGAT.
FD542680       --> CTCTTGATGCGAGGTTGGAGGTCGCTTTCCGCAAGAAACTCCCTGAGATT
EX895683       --> ..................................................
FD571002       --> ..................................................
EX747110       --> CTCTTGATGCGAGGTTGGAGGTCGCTTTCCGCAAGAAACTCCCTGAGATT
EV569826       --> CTCTTGATGCGAGGTTGGAGGTCGCTTTCCGCAAGAAACTCCCTGAGATT
EX770799       --> CTCTTGATGCGAGGTTGGAGGTCGCTTTCCGCAAGAAACTCCCTGAGATT

               801    -    851
UN11279        --> CGAAAGGCGCTCTTTGGCCAGGTTGGGGCAGCTTGATTGATGATGAGTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531661       <-- CGAAAGGCGCTCTTTGGCCAGGTTGGGGCAGCTTGATTGATGATGAGTGA
EW728127       <-- CGAAAGGCGCTCTTTGGCCAGGTTGGGGCAGCTTGATTGATGATGAGTGA
EX768966       <-- CGAAAGGCGCTCTTTGGCCAGGTTGGGGCAGCTTGATTGATGATGAGTGA
EX760379       <-- CGAAAGGCGCTCTTTGGCCAGGTTGGGGCAGCTTGGTTGATGATGAGTGA
EV574274       <-- CGAAAGGCGCTCTTTGGCCAGGTTGGGGCAGCTTGATTGATGATGAGTGA
EY943903       <-- CGAAAGGCGCTCTTTGGCCAGGTTGGGGCAGCTTGATTGATGATGAGTGA
FD538686       <-- CGAAAGGCGCTCTTTGGCCAGGTTGGGGCAGCTTGATTGATGATGAGTGA
EX761065       <-- CGAAAGGCGCTCTTTGGCCAGGTTGGGGCAGCTTGATTGATGATGAGTGA
FD943456       <-- CGAAAGGCGCTCTTTGGCCAGGTTGGGGCAGCTTGATTGATGATGAGTGA
EX774941       <-- CGAAAGGCGCTCTTTGGCCAGGTTGGGGCAGCTTGATTGATGATGAGTGA
FD574917       <-- CGAAAGGCGCTCTTTGGCCAGGTTGGGGCAGCTTGATTGATGATGAGTGA
EY916030       --> ..................................................
FD544198       --> ..................................................
EX749639       --> ..................................................
EY948146       --> ..................................................
EX765173       --> ..................................................
FD532060       --> CGAAAGGCGCTCTTTGGCCAGGTTGGGGCAGCTTGATTGATGATGAGTGA
FD560512       --> ..................................................
EV527890       --> CGAAAGGCGCTCTTTGGCCAGGTTGGGGCAGCTTGATTGATGATGAGTGA
EV527405       --> CGAAAGGCGCTCTTTGGCCAGGTTGGGGCAGCTTGATTGATGATGAGTGA
EX756603       --> ..................................................
FD542680       --> CGAAAGGCGCTCTTTGGCCAGGTTGGGGCAGCTTGATTGATGATGAGTGA
EX895683       --> ..................................................
FD571002       --> ..................................................
EX747110       --> CGAAAGGCGCTCTTTGGCCAGGTTGGGGCAGCTTGATTGATGATGAGTGA
EV569826       --> CGAAAGGCGCTCTTTGGCCAGGTTGGGGCAGCTTGATTGATGATGAGTGA
EX770799       --> CGAAAGGCGCTCTTTGGCCAGGTTGGGGCAGCTTGATTGATGATGAGTGA

               851    -    901
UN11279        --> CTCCAACTTTGAACCATGAGAGCAGGTAATGGCTCCATTATCTACCATCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531661       <-- CTCCAACTTTGAACCATGAGAGCAGGTAATGGCTCCATTATCTACCATCC
EW728127       <-- CTCCAACTTTGAACCATGAGAGCAGGTAATGGCTCCATTATCTACCATCC
EX768966       <-- CTCCAGCTTTGAACCATGAGAGCAGGTAATGGCTCCATTATCTACCATCC
EX760379       <-- CTCCAGCTTTGAACCATGAGAGCAGGTAATGGCTCCATTATCTACCATCC
EV574274       <-- CTCCAACTTTGAACCATGAGAGCAGGTAATGGCTCCATTATCTACCATCC
EY943903       <-- CTCCAACTTTGAACCATGAGAGCAGGTAATGGCTCCATTATCTACCATCC
FD538686       <-- CTCCAGCTTTGAACCATGAGAGCAGGTAATGGCTCCATTATCTACCATCC
EX761065       <-- CCCCAACTTTGAACCATGAGAGCAGGTAATGGCTCCATTATCTACCATCC
FD943456       <-- CTCCAACTTTGAACCATGAGAGCAGGTAATGGCTCCATTATCTACCATCC
EX774941       <-- CTCCAACTTTGAACCATGAGAGCAGGTAATGGCTCCATTATCTACCATCC
FD574917       <-- CTCCAACTTTGAACCATGAGAGCAGGTAATGGCTCCATTATCTACCATCC
EY916030       --> ..................................................
FD544198       --> ..................................................
EX749639       --> ..................................................
EY948146       --> ..................................................
EX765173       --> ..................................................
FD532060       --> CTCCAACTTTGA-CCATGAGAGC...........................
FD560512       --> ..................................................
EV527890       --> ..................................................
EV527405       --> CTCCAACTTTGAACCATGAGAGCAG-TAATGGCTCCATTATCTAC-ATCC
EX756603       --> ..................................................
FD542680       --> CTCC..............................................
EX895683       --> ..................................................
FD571002       --> ..................................................
EX747110       --> CTCCAACTTTGAACCATGAGAGCAGGTAATGGCTCCATTATCTACCATCC
EV569826       --> CTCCAACTTTGAACCATGAGAGCAG-TAATGGCTCCATTATCTAC.....
EX770799       --> CTCCAACTTTGAACCATGAGAGCAGGTAATGGCTCCATTATCTACCATCC

               901    -    951
UN11279        --> ATTCTTTCTATTACCAATTTTAAACTCTGTGTTATATGTTAATGGGCCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531661       <-- ATTCTTTCTATTACCAATTTTAAACTCTGTGTTATATGTTAATGGGCCTT
EW728127       <-- ATTCTTTCTATTACCAATTTTAAACTCTGTGTTATATGTTAATGGGCCTT
EX768966       <-- ATTCTTTCTATTACCAATTTTAAACTCTGTGTTATATGTTAATGGGCCTT
EX760379       <-- ATTCTTTCTATTACCAATTTTAAACTCTGTGTTATATGTTAATGGGCCTT
EV574274       <-- ATTCTTTCTATTACCAATTTTAAACTCCGTGTTATATGTTAATGGGCCTT
EY943903       <-- ATTCTTTCTATTACCAATTTTAAACTCTGTGTTATATGCTAATGGGCCTT
FD538686       <-- ATTCTTTCTATTACCAATTTTAAATTCTGTGTTATATGTTAATGGGCCTT
EX761065       <-- ATTCTTTCTATTACCAATTTTAAACTCTGTGTTATATGTTAATGGGCCTT
FD943456       <-- ATTCTTTCTATTACCAATTTTAAACTCTGTGTTATATGTTAATGGGCCTT
EX774941       <-- ATTCTTTCCATTACCAATTTTAAACTCTGTGTTATATGTTAATGGGCCTT
FD574917       <-- ATTCTTTTTATTACCAATTTTAAACTCTGTGTTATATGTTAATGGGCCTT
EY916030       --> ..................................................
FD544198       --> ..................................................
EX749639       --> ..................................................
EY948146       --> ..................................................
EX765173       --> ..................................................
FD532060       --> ..................................................
FD560512       --> ..................................................
EV527890       --> ..................................................
EV527405       --> ATTCTT-CTATTAC-AATTTaact..........................
EX756603       --> ..................................................
FD542680       --> ..................................................
EX895683       --> ..................................................
FD571002       --> ..................................................
EX747110       --> ATTCTTTCTATTACCAATTTTAAACTCTGTGTTATATGTTAATGGGCCTT
EV569826       --> ..................................................
EX770799       --> ATTCTTTCCATTACCAATTTTAAACTCTGTGTTATATGTTAATGGGCCTT

               951    -   1001
UN11279        --> TGCTTTTTGTCAATGGACCTTGGCCTACCTTGGCCTTTGTGTGGTGATGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531661       <-- TGCTTTTTGTCAATGGACCTTGGCCTACCTTGGCCTTTGTGTGGTGATGT  Raphanus raphanistrum subsp. maritimus
EW728127       <-- TGCTTTTTGTCAATGGACCTTGGCCTACATTGGCCTTTGTGTGGTGATGT  Raphanus sativus cv Early Scarlet Globe
EX768966       <-- TGCTTTTTGTCAATGGACCTTGGCCTACCTTGGCCTTTGTGTGGTGATGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX760379       <-- TGCTTTTTGTCAATGGACCTTGGCCTACCTTGGCCTTTGTGTGGTGATGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV574274       <-- TGCTTTTTGTCAATGGACCTTGGCCTACCTTGGCCTTTGTGTGGTGATGT  Raphanus raphanistrum subsp. landra
EY943903       <-- TGCTTTTTGTCAATGGACCTTGGCCTACCTTGGCCTTTGTGTGGTGATGT  Raphanus sativus cv Rat-Tail Radish #3870
FD538686       <-- TGCTTTTTGTCAATGGACCTTGGCCTACCTTGGCCTTTGTGTGGTGATGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX761065       <-- TGCTTTTTGTCAATGGACCTTGGCCTACCTTGGCCTTTGTGTGGTGATGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD943456       <-- TGCTTTTTGTCAATGGACCTTGGCCTACATTGGCCTTTGTGTGGTGATGT  Raphanus sativus cv Early Scarlet Globe
EX774941       <-- TGCTTTTTGTCAATGGACCTTGGCCTACATTGGCCTTTGTGTGGTGATGT  Raphanus raphanistrum subsp. landra
FD574917       <-- TGCTTTTTGTCAATGGACCTTGGCCTACATTGGCCTTTGTGTGGTGATGT  Raphanus sativus cv Early Scarlet Globe
EY916030       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD544198       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX749639       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY948146       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX765173       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD532060       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD560512       --> ..................................................  Raphanus sativus var. oleiformis
EV527890       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV527405       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX756603       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD542680       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX895683       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD571002       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX747110       --> TGCTTTTTGTCAATGTACCTTGGCCTACCTTGGCCTTTGTGTGGTGATGT  Raphanus raphanistrum subsp. maritimus
EV569826       --> ..................................................  Raphanus raphanistrum subsp. landra
EX770799       --> TGCTTTTTGTCAATGGACCTTGGCCTACATTGGCCTTTGTGTGGTGATGT  Raphanus raphanistrum subsp. landra

               1001   -   1051
UN11279        --> TATAAATAAATACTTTGTTGAATGTACCTTTTCTTCTCATAAATGTTTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531661       <-- TATAAATAAATACTTTGTTGAATag.........................
EW728127       <-- TATAAATAAATACTTTGTTGAATGTACCTTTTCTTCTCATAAATGTTTCT
EX768966       <-- TATAAATAAATACTTTGTTG..............................
EX760379       <-- TATAAATAAATACTTTGTTGAATGT.........................
EV574274       <-- TATAAATAAATACTTTGTTGAATGTACCTTTTCTTCTC............
EY943903       <-- TATAAATAAATACTTTGTTGAATGg.........................
FD538686       <-- TATAAATAAATA......................................
EX761065       <-- TATAAATAAATACTTTGTTGAATGTACCTTTTCTTCTCATAAATGTTTCT
FD943456       <-- TATAAATAAATACTT...................................
EX774941       <-- TATAAATAAATACTTTGTTG..............................
FD574917       <-- TATAAATAAATACTTTGTTGAATGc.........................
EY916030       --> ..................................................
FD544198       --> ..................................................
EX749639       --> ..................................................
EY948146       --> ..................................................
EX765173       --> ..................................................
FD532060       --> ..................................................
FD560512       --> ..................................................
EV527890       --> ..................................................
EV527405       --> ..................................................
EX756603       --> ..................................................
FD542680       --> ..................................................
EX895683       --> ..................................................
FD571002       --> ..................................................
EX747110       --> TATAAATAAATA......................................
EV569826       --> ..................................................
EX770799       --> TATAAATAAATACTTTGTTG..............................

               1051   -   1101
UN11279        --> ATAATGCCGCC
                   ~~~~~~~~~~~
EV531661       <-- ...........
EW728127       <-- ATAATGCCGCC
EX768966       <-- ...........
EX760379       <-- ...........
EV574274       <-- ...........
EY943903       <-- ...........
FD538686       <-- ...........
EX761065       <-- AT.........
FD943456       <-- ...........
EX774941       <-- ...........
FD574917       <-- ...........
EY916030       --> ...........
FD544198       --> ...........
EX749639       --> ...........
EY948146       --> ...........
EX765173       --> ...........
FD532060       --> ...........
FD560512       --> ...........
EV527890       --> ...........
EV527405       --> ...........
EX756603       --> ...........
FD542680       --> ...........
EX895683       --> ...........
FD571002       --> ...........
EX747110       --> ...........
EV569826       --> ...........
EX770799       --> ...........