Library    |     Search    |     Batch query    |     SNP    |     SSR  

Alignment for radish unigene UN11493

               1      -     51
UN11493        --> GGGGATTCACAGAAGATCTCAAATCGAAATCGAAAATCGAAAAAA-GATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721327       <-- ..................................................
EX774098       <-- ..................................................
EV543401       <-- ..................................................
FD529129       <-- ..................................................
EV544665       <-- ..................................................
FD545230       <-- ..................................................
FD959175       <-- ..................................................
EW716875       --> GGGGATTCACAGAAGATCTCAAATCGAAATCGAAAATCGAAAAAA-GATG
EV549129       --> ........ggAGAAGATCTCAAATCGAAATCGAAA-TCGAAAAAAAGATG
FD532752       --> ........ggAGAAGATCTCAAATCGAAATCGAAAATCGAAAAAA-GATG
EV547548       --> ..................ggAAATCGAAATCGAAA-TCGAAAAAAAGATG
FD569770       --> ..................ggAAATCGAAATCGAAAATCGAAAAAA-GATG

               51     -    101
UN11493        --> ATCAGAAGAAGAATCTCTTCGATCATTTCATCGTCTCTCATCAATTCTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721327       <-- ..................................................
EX774098       <-- ..................................................
EV543401       <-- ..................................................
FD529129       <-- ..................................................
EV544665       <-- ..................................................
FD545230       <-- ..................................................
FD959175       <-- ..................................................
EW716875       --> ATCAGAAGAAGAATCTCTTCGATCATTTCATCGTCTCTCATCAATTCTCC
EV549129       --> ATCAGAAGAAGAATCTCTTCGATCATTTCATCGTCTCTCGTCAATTCTCC
FD532752       --> ATCAGAAGAAGAATCTCTTCGATCATTTCATCGTCTCTCATCAATTCTCC
EV547548       --> ATCAGAAGAAGAATCTCTTCGATCATTTCATCGTCTCTCGTCAATTCTCC
FD569770       --> ATCAGAAGAAGAATCTCTTCGATCATTTCATCGTCTCTCATCAATTCTCC

               101    -    151
UN11493        --> ATTTCATCACTCCGCCAAGCCCAGATTCATCGTCTCTTCGCCGCTTCTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721327       <-- ..................................................
EX774098       <-- ..................................................
EV543401       <-- ..................................................
FD529129       <-- ..................................................
EV544665       <-- ..................................................
FD545230       <-- ..................................................
FD959175       <-- ..................................................
EW716875       --> ATTTCATCACTCCGCCAAGCCCAGATTCATCGTCTCTTCGCCGCTTCTTC
EV549129       --> GTTTCATCACTCCGCCACGCCCAGATCCATCGTCTCTTCGCCGCTTCTTC
FD532752       --> ATTTCATCACTCCGCCAAGCCCAGATTCATCGTCTCTTCGCCGCTTCTTC
EV547548       --> GTTTCATCACTCCGCCACGCCTAGATCCATCGTCTCTTCGCCGCTTCTTC
FD569770       --> ATTTCATCACTCCGCCAAGCCCAGATTCATCGCCTCTTCGCCGCTTCTTC

               151    -    201
UN11493        --> AATGCCGTCGATCTCCGATCCTGACTCAAGCTCCTCCTACCTTCGCGGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721327       <-- .................................................A
EX774098       <-- ..................................................
EV543401       <-- ..................................................
FD529129       <-- ..................................................
EV544665       <-- ..................................................
FD545230       <-- ..................................................
FD959175       <-- ..................................................
EW716875       --> AATGCCGTCGATCTCCGATCCTGACTCAAGCTCCTCCTACCTTCGCGGGA
EV549129       --> AATGCCGCCGATCTCCTATCCTGACTCAAGCTCCACCTACCTTAGCGGGA
FD532752       --> AATGCCGTCGATCTCCGATCCTGACTCAAGCTCCTCCTACCTTCGCGGGA
EV547548       --> AATGCCGCCGATCTCCTGTCCTGACTCAAGCTCCGCCTACCTTAGCGGGA
FD569770       --> AATGCCGTCGATCTCCGATCCTGACTCAAGCTCCTCCTACCTTCGCGGGA

               201    -    251
UN11493        --> AGAAGAGTTCCGTCGTTCGAGGGGATCAGGGCTTACAGTTTGCTGAGCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721327       <-- AGAAGAGT-CCGTCGT-CGAGGGGATCAGG-CTTACAGTT-GCTGAGC-T  Raphanus sativus var. oleiformis
EX774098       <-- ....................GGGAATCAGGGCTTACAGTT-GCTGAGC-T  Raphanus raphanistrum subsp. landra
EV543401       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD529129       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV544665       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD545230       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD959175       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EW716875       --> AGAAGAGTTCCGTCGTTCGAGGGGATCAGGGCTTACAGTTTGCTGAGCCT  Raphanus sativus var. oleiformis
EV549129       --> AGAAGAGTTTCGTCGTTCGAGGGAATCAGGGCTTACAGTTTGCTGAGCCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD532752       --> AGAAGAGTTCCGTCGTTCGAGGGGATCAGGGCTTACAGTTTGCTGAGCCT  Raphanus raphanistrum subsp. maritimus
EV547548       --> AGAAGAGTTTCGTCGTTCGAGGGAATCAGGGCTTACAGTTTGCTGAGCCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD569770       --> AGAAGAGTTCCGTCGTTCGAGGGGATCAGGGCTTACAGTTTGCTGAGCCT  Raphanus sativus cv Early Scarlet Globe

               251    -    301
UN11493        --> GAACGATCTGAGAGACAATGTGCCGAGAAAGCTGAAGACGAGGAAAGGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721327       <-- GAACGATCTGAGAGACAATGTGCCGAGAAAGCTGAAGACGAGGAAAGGAA
EX774098       <-- GAACGATCTGAGAGACAATGTGCCGAGAAAGCTGAAGACGAGGAAAGGAA
EV543401       <-- ..ACGATCTGAGAGACAATGTGCCGAGAAAGCTGAAGACGAGGAAAGGAA
FD529129       <-- .......CTGAGAGACAATGTGCCGAGAAAGCTGAAGACGAGGAAAG-AA
EV544665       <-- ..........AGAGACAATGTGCCGAGAAAGCTGAAGACGAGGAAAGGAA
FD545230       <-- ..................................................
FD959175       <-- ..................................................
EW716875       --> GAACGATCTGAGAGACAATGTGCCGAGAAAGCTGAAGACGAGGAAAGGAA
EV549129       --> GAACGATCTGAGAGACAATGTGCCGAGAAAGCTGAAGACGAGGAAAGGAA
FD532752       --> GAACGATCTGAGAGACAATGTGCCGAGAAAGCTGAAGACGAGGAAAGGAA
EV547548       --> GAACGATCTGAGAGACAATGTGCCGAGAAAGCTGAAGACGAGGAAAGGAA
FD569770       --> GAACGATCTGAGAGACAATGTGCCGAGAAAGCTGAAGACGAGGAAAGGAA

               301    -    351
UN11493        --> GAGGTATCGGGTCTGGGAAAGGTAAAACGGCGGGGAGAGGTCACAAGGGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721327       <-- GAGGTATCGGGTCTGGGAAAGGCAAAACGGCGGGGAGAGGTCACAAGGGG  Raphanus sativus var. oleiformis
EX774098       <-- GAGGTATCGGGTCTGGGAAAGGTAAAACGGCGGGGAGAGGTCACAAGGGG  Raphanus raphanistrum subsp. landra
EV543401       <-- GAGGTATCGGGTCTGGGAAAGGTAAAACCGCGGGGAGAGGTCACAAGGGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD529129       <-- GAGGTATCGGGTCTGGGAAAGGCAAAACGGCGGGGAGAGGTCACAAGGGG  Raphanus raphanistrum subsp. maritimus
EV544665       <-- GAGGTATCGGGTCTGGGAAAGGTAAAACCGCGGGGAGAGGTCACAAGGGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD545230       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD959175       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EW716875       --> GAGGTATCGGGTCTGGGAAAGGCAAAACGGCGGGGAGAGGTCACAAGGGG  Raphanus sativus var. oleiformis
EV549129       --> GAGGTATCGGGTCTGGGAAAGGTAAAACCGCGGGGAGAGGTCACAAGGGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD532752       --> GAGGTATCGGGTCTGGGAAAGGCAAAACGGCGGGGAGAGGTCACAAGGGG  Raphanus raphanistrum subsp. maritimus
EV547548       --> GAGGTATCGGGTCTGGGAAAGGTAAAACCGCGGGGAGAGGTCACAAGGGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD569770       --> GAGGTATCGGGTCTGGGAAAGGCAAAACGGCGGGGAGAGGTCACAAGGGG  Raphanus sativus cv Early Scarlet Globe

               351    -    401
UN11493        --> CAGAAGGCGAGAGGGACGATGAAGTTTGGTTTCGAAGGTGGGCAGACTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721327       <-- CAGAAGGCGAGAGGGACGATGAAGTTCGGTTTCGAAGGTGGGCAGACTCC  Raphanus sativus var. oleiformis
EX774098       <-- CAGAAGGCGAGAGGGACGATGAAGTTTGGTTTCGAAGGTGGGCAGACTCC  Raphanus raphanistrum subsp. landra
EV543401       <-- CAGAAGGCGAGAGGGACGATGAAGTTTGGTTTCGAAGGTGGGCAGACTCC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD529129       <-- CAGAAGGCGAGAGGGACGATGAAGTTCGGTTTCGAAGGTGGGCAGACTCC  Raphanus raphanistrum subsp. maritimus
EV544665       <-- CAGAAGGCGAGAGGGACGATGAAGTTTGGTTTCGAAGGTGGGCAGACTCC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD545230       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD959175       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EW716875       --> CAGAAGGCGAGAGGGACGATGAAGTTCGGTTTCGAAGGTGGGCAGACTCC  Raphanus sativus var. oleiformis
EV549129       --> CAGAAGGCGAGAGGGACGATGAAGTTTGGTTTCGAAGGTGGGCAGACTCC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD532752       --> CAGAAGGCGAGAGGGACGATGAAGTTCGGTTTCGAAGGTGGGCAGACTCC  Raphanus raphanistrum subsp. maritimus
EV547548       --> CAGAAGGCGAGAGGGACGATGAAGTTTGGTTTCGAAGGTGGGCAGACTCC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD569770       --> CAGAAGGCGAGAGGGACGATGAAGTTTGGTTTCGAAGGTGGGCAGACTCC  Raphanus sativus cv Early Scarlet Globe

               401    -    451
UN11493        --> TTTACGACGCCGTTTGCCTAAACGTGGCTTCAAGAACAAGTTTAAGCTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721327       <-- TTTACGACGCCGTTTGCCTAAACGTGGCTTCAAGAACAAGTTTAAGCTCC
EX774098       <-- TTTACGACGCCGTTTGCCTAAACGTGGCTTCAAGAACAAGTTTAAGCTCC
EV543401       <-- TTTACGACGCCGTTTTCCTAAACGTGGCTTCAAGAACAAGTTTAAGCTCC
FD529129       <-- TTTACGACGCCGTTTGCCTAAACGTGGCTTCAAGAACAAGTTTAAGCTCC
EV544665       <-- TTTACGACGCCGTTTGCCTAAACGTGGCTTCAAGAGCAAGTTTAAGCTCC
FD545230       <-- .................................................C
FD959175       <-- .................................................C
EW716875       --> TTTACGACGCCGTTTGCCTAAACGTGGCTTCAAGAACAAGTTTAAGCTCC
EV549129       --> TTTACGACGCCGTTTGCCTAAACGTGGCTTCAAGAGCAAGTTTAAGCTCC
FD532752       --> TTTACGACGCCGTTTGCCTAAACGTGGCTTCAAGAACAAGTTTAAGCTCC
EV547548       --> TTTACGACGCCGTTTTCCTAAACGTGGCTTCAAGAACAAGTTTAAGCTCC
FD569770       --> TTTACGACGCCGTTTGCCTAAACGTGGCTTCAAGAACAAGTTTAAGCTCC

               451    -    501
UN11493        --> ATTTTCAGCCGGTTGGTTTGGGGAAGATCGCTAAACTCATAAACGCTGGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721327       <-- ACTTTCAGCCGGTTGGTTTGGGGAAGATCGCTAAACTCATAAACGCCGGG  Raphanus sativus var. oleiformis
EX774098       <-- ATTTTCAGCCGGTTGGTTTGGGGAAGATCGCTAAACTCATAAACGCTGGG  Raphanus raphanistrum subsp. landra
EV543401       <-- ATTTTCAGCCGGTTGGTTTGGGGAAGATCGCTAAACTCATAAACGCTGGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD529129       <-- ATTTTCAGCCGGTTGGTTTGGGGAAGATCGCTAAACTCATAAACGCCGGG  Raphanus raphanistrum subsp. maritimus
EV544665       <-- ATTTTCAGCCGGTTGGTTTGGGGAAGATCGCTAAACTCATAAACGCTGGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD545230       <-- ATTTTCAGCCGGTTGGTTTGGGGAAGATCGCTAAACTCATAAACGCTGGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD959175       <-- ATTTTCGGCCGGTTGGTTTGGGGAAGATCGCTAAACTCATAAACGCTGGG  Raphanus raphanistrum subsp. maritimus
EW716875       --> ACTTTCAGCCGGTTGGTTTGGGGAAGATCGCTAAACTCATAAACGCCGGG  Raphanus sativus var. oleiformis
EV549129       --> ATTTTCAGCCGGTTGGTTTGGGGAAGATCGCTAAACTCATAAACGCTGGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD532752       --> ATTTTCAGCCGGTTGGTTTGGGGAAGATCGCTAAACTCATAAACGCCGGG  Raphanus raphanistrum subsp. maritimus
EV547548       --> ATTTTCAGCCGGTTGGTTTGGGGAAGATCGCTAAACTCATAAACGCTGGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD569770       --> ATTTTCAGCCGGTTGGTTTGGGGAAGATCGCTAAACTCATAAACGCTGGG  Raphanus sativus cv Early Scarlet Globe

               501    -    551
UN11493        --> GAGATAGATTCACATGAGTTGATCACGATGAAAACGCTCAAGGATGTGGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721327       <-- CAGATAGATTCACATGAGTTAATCACGATGAAAACGCTCAAGGATGTGGG  Raphanus sativus var. oleiformis
EX774098       <-- GAGATAGATTCACATGAGTTGATCACGATGAAAACGCTCAAGGATGTGGG  Raphanus raphanistrum subsp. landra
EV543401       <-- GAGATAGATTCACATGAGTTGATCACGATGAAAACGCTCAAGGATGTGGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD529129       <-- CAGATAGATTCACATGAGTTGATCACGATGAAAACGCTCAAGGATGTGGG  Raphanus raphanistrum subsp. maritimus
EV544665       <-- GAGATAGATTCACATGAGTTGATCACGATGAAAACGCTCAAGGATGTGGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD545230       <-- GAGATAGATTCACATGAGTTGATCACGATGAAAACGCTCAAGGATGTGGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD959175       <-- GAGATAGATTCACATGAGTTGATCACGATGAAAACGCTCAAGGATGTGGG  Raphanus raphanistrum subsp. maritimus
EW716875       --> CAGATAGATTCACATGAGTTAATCACGATGAAAACGCTCAAGGATGTGGG  Raphanus sativus var. oleiformis
EV549129       --> GAGATAGATTCACATGAGTTGATCACGATGAAAACGCTCAAGGATGTGGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD532752       --> CAGATAGATTCACATGAGTTGATCACGATGAAAACGCTCAAGGATGTGGG  Raphanus raphanistrum subsp. maritimus
EV547548       --> GAGATAGATTCACATGAGTTGATCACGATGAAAACGCTCAAGGATGTGGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD569770       --> GAGATAGATTCACATGAGTTGGTCACGATGAAAACGC.............  Raphanus sativus cv Early Scarlet Globe

               551    -    601
UN11493        --> AGCTATCGGAAAGCAAATAGAAGACGGAGTGAGACTGATGGGTCGTGGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721327       <-- AGCTATCGGAAAGCAAATAGAAGACGGAGTGAGACTGATGGGTCGTGGTG
EX774098       <-- AGCTATCGGAAAGCAAATAGAAGACGGAGTGAGACTGATGGGTCGTGGTG
EV543401       <-- AGCTATCGGAAAGCAAATAGAAGACGGAGTGAGACTGATGGGTCGTGGTG
FD529129       <-- AGCTATCGGAAAGCAAATAGAAGACGGAGTGAGACTGATGGGTCGTGGTG
EV544665       <-- AGCTATCGGAAAGCAAATAGAAGACGGAGTGAGACTGATGGGTCGTGGTG
FD545230       <-- AGCTATCGGAAAGCAAATAGAAGACGGAGTGAGACTGATGGGTCGTGGTG
FD959175       <-- AGCTATCGGAAAGCAAATAGAAGACGGAGTGAGACTGATGGGTCGTGGTG
EW716875       --> AGCTATCGGAAAGCAAATAGAAGACGGAGTGAGACTGATGGGTCGTGGTG
EV549129       --> AGCTATCGGAAAGCAAATAGAAGACGGAGTGAGACTGATGGGTCGTGGTG
FD532752       --> AGCTATCGGAAAGCAAATAGAAGACGGAGTGAGACTGATGGGTCGTGGTG
EV547548       --> AGCTATCGGAAAGCAAATAGAAGACGGAGTGAGACTGATGGGTCGTGGTG
FD569770       --> ..................................................

               601    -    651
UN11493        --> CTGATGAGATCAAATGGCCACTTCATTTCGAGGTTTCGAGAGTGACAGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721327       <-- CTGATGAGATCAAATGGCCACTTCATTTCGAGGTTTCGAGAGTGACAGTT
EX774098       <-- CTGATGAGATCAAATGGCCACTTCATTTCGAGGTTTCGAGAGTGACAGTT
EV543401       <-- CTGATGAGATCAAATGGCCACTTCATTTCGAGGTTTCGAGAGTGACAGCT
FD529129       <-- CTGATGAGATCAAATGGCCACTTCATTTCGAGGTTTCGAGAGTGACAGTT
EV544665       <-- CTGATGAGATCAAATGGCTACTTCATTTCGAGGTTTCGAGAGTGACAGTT
FD545230       <-- CTGATGAGATCAAATGGCCACTTCATTTCGAGGTTTCGAGAGTGACAGTT
FD959175       <-- CTGATGAGATCAAATGGCCACTTCATTTCGAGGTTTCGAGAGTGACAGTT
EW716875       --> CTGATGAGATCAAATGGCCACTTCATTTCGAGGTTTCGAGAGTGACAGT.
EV549129       --> CTGATGAGATCAAATGGCTACTTCATTTCGAGGTTTCGAGAGTGACAGTT
FD532752       --> CTGATGAGATCAAATGGCCACTTCATTTCGAGGTTTCGAGAGTGACAGTT
EV547548       --> CTGATGAGATCAAATGGCCACTTCATTTCGAGGTTTCGAGAGTGACAGCT
FD569770       --> ..................................................

               651    -    701
UN11493        --> AGGGCCAAGGAGGTGGTGGAAGCAGCAGGAGGATCGGTGAGAAGAGTGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721327       <-- AGGGCCAAGGAGGTGGTAGAAGCAGCAGGAGGATCGGTGAGAAGAGTGTA
EX774098       <-- AGGGCAAAGGAGGTGGTGGAAGCAGCAGGAGGATCGGTGAGAAGAGTGTA
EV543401       <-- AGGGCCAAGGAGGTGGTGGAAGCAGCAGGAGGATCGGTGAGAAGAGTGTA
FD529129       <-- AGGGCCAAGGAGGTGGTGGAAGCAGCAGGAGGATCGGTGAGAAGAGTGTA
EV544665       <-- AGGGCCAAGGAGGTGGTGGAAGCAGCAGGAGGATCGGTGAGAAGAGTGTA
FD545230       <-- AGGGCCAAGGAGGTGGTGGAAGCAGCAGGAGGATCGGTGAGAAGAGTGTA
FD959175       <-- AGGGCCAAGGAGGTGGTGGATGCAGCAGGAGGATCGGTGAGAAGAGGGTA
EW716875       --> ..................................................
EV549129       --> AGGGCCAAGGAGGTGGTGGAAGCA..........................
FD532752       --> AGGGCCAAGGAGGTGGTGGAAGCAGCAG-AGGATCGGTGAGAAGAGTGTA
EV547548       --> AGGGCCAAGGAGGTGGTGGAAGCA..........................
FD569770       --> ..................................................

               701    -    751
UN11493        --> TTACAACAAATTGGGGTTGAGGGCATTACTTCGACCGGAATGGTTTGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721327       <-- TTACAACAAATTGGGGTTGAGGGCATTACTTCGACCGGAATGGTTTGAGA
EX774098       <-- TTACAACAAATTGGGGTTGAGGGCATTACTTCGACCGGAATGGTTTGAGA
EV543401       <-- TTACAACAAATTGGGGTTGAGGGCATTACTTCGACCGGAATGGTTTGAGA
FD529129       <-- TTACAACAAATTGGGGTTGAGGGCATTACTTCGACCGGAATGGTTTGAGA
EV544665       <-- TTACAACAAATTGGGGTTGAGGGCATTACTTCGACCGGAATGGTTTGAGA
FD545230       <-- TTACAACAAATTGGGGTTGAGGGCATTACTTCGACCGGAATGGTTTGAGA
FD959175       <-- TTACAACAAATTGGGGTTGAGGGCATTACTTCGACCGGAATGGTTTGAGA
EW716875       --> ..................................................
EV549129       --> ..................................................
FD532752       --> TTACAACAAATTGGGGTTGAGGGCATTACTTCGACCGGAA..........
EV547548       --> ..................................................
FD569770       --> ..................................................

               751    -    801
UN11493        --> AGAAAGAAAGGCTATTGCCAAAAGCAGCCAGACCACCTCCTAAACAACAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721327       <-- AGAAAGGAAGGCTATTGCCAAAAGCAGCCAGACCGCCTCCTAAGCAACAA
EX774098       <-- AGAAAGGAAGGCTATTGCCAAAAGCAGCCAGACCGCCTCCTAAGCAACAA
EV543401       <-- AGAAAGAAAGGCTATTGCCAAAAGCAGCCAGACCACCTCCTAAACAACAA
FD529129       <-- AGAAAGGAAGGCTATTGCCAAAAGCAGCCAGACCGCCTCCTAAGCAACAA
EV544665       <-- AGAAAGAAAGGCTATTGCCAAAAGCAGCCAGACCACCTCCTAAACAACAA
FD545230       <-- AGAAAGAAAGGCTATTGCCAAAAGCAGCCAGACCACCTCCTAAACAACAA
FD959175       <-- AGAAAGAAAGGCTATTGCCAAAAGCAGCCAGACCACCTCCTAAACAACAA
EW716875       --> ..................................................
EV549129       --> ..................................................
FD532752       --> ..................................................
EV547548       --> ..................................................
FD569770       --> ..................................................

               801    -    851
UN11493        --> GATAGGGTCGATAGCATCGGACGTCTTCCTGCTCCGAAGAAACCCATCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721327       <-- GATAGGGTCGATAGCATCGGACGTCTTCCTGCTCCGAAGAAACCCATCCC
EX774098       <-- GACAGGGTCGATAGCATCGGACGTCTTCCTGCTCCGAAGAAACCCATCCC
EV543401       <-- GATAGGGTCGATAGCATCGGACGTCTTCCTGCTCCGAAGAAACCCATCCC
FD529129       <-- GACAGGGTCGATAGCATCGGACGTCTTCCTGCTCCGAAGAAACCCATCCC
EV544665       <-- GATAGGGTCGATAGCATCGGACATCTTCCTGCTCCGAAGAAACCCATCCC
FD545230       <-- GATAGGGTCGATAGCATCGGACGTCTTCCTGCTCCGAAGAAACCCATCCC
FD959175       <-- GATAGGGTCGATAGCATCGGACGTCTTCCTGCTCCGAAGAAACCCATCCC
EW716875       --> ..................................................
EV549129       --> ..................................................
FD532752       --> ..................................................
EV547548       --> ..................................................
FD569770       --> ..................................................

               851    -    901
UN11493        --> TTTCTA-TGCAGCTGAGGAAAACAAAGTTGAGTCTCCTGTTGAATCATGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721327       <-- TTTCTA-TGCAGCTGAGGAAAACAAAGTTGAGTCTCCTGTTGAATCATGA
EX774098       <-- TTTCTAATGCAGCTGAGGAAAACAAAGTTGAGTCTCCTGTTGAATCATGA
EV543401       <-- TTTCTA-TGCAGCTGAGGAAAACAAAGTTGAGTCTCCTGTTGAATCATGA
FD529129       <-- TTTCTA-TGCAGCTGAGGAAAACAAAGTTGAGTCTCCTGTTGAATCATGA
EV544665       <-- TTTCTA-TGCAGCTGAGGAAAACAAAGTTGAGTCTCCTGTTGAATCATGA
FD545230       <-- TTTCTA-TGCAGCTGAGGAAAACAAAGTTGAGTCTCCTGTTGAATCATGA
FD959175       <-- TTTCTA-TGCAGCTGAGGAAAACAAAGTTGAGTCTCCTGTTGAATCATGA
EW716875       --> ..................................................
EV549129       --> ..................................................
FD532752       --> ..................................................
EV547548       --> ..................................................
FD569770       --> ..................................................

               901    -    951
UN11493        --> TTTCGGTTAGTTTTTTTTAACTTTTGATGTTTTGGTTTAAGTTGTTCGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721327       <-- TTTCGGTTAGTTTTTTTTAACTTTTGATGTTTTGGTTTAAGTTGTTCGTG
EX774098       <-- TTTCGGTTAGTTTTTTTTAACTTTTGATGTTTTGGTTTAAGTTGTTCGTG
EV543401       <-- TTTCGGTTAGTTTTTTTTAACTTTTGATGTTTTGGTTTAAGTTGTTCGTG
FD529129       <-- TTTCGGTTATTTTTTTTTAACTTTTGATGTTTTGGTTTAAGTTGTTCGTG
EV544665       <-- TTTCGGTTAGTTTTTTTTAACTTTTGATGTTTTGGTTTAAGTTGTTCGTG
FD545230       <-- TTTCGGTTAGTTTTTTTTAACTTTTGATGTTTTGGTTTAAGTTGTTCGTG
FD959175       <-- TTTCGGTTAGTTTTTTTTAACTTTTGATGTTTTGGTTTAAGTTGTTCGTG
EW716875       --> ..................................................
EV549129       --> ..................................................
FD532752       --> ..................................................
EV547548       --> ..................................................
FD569770       --> ..................................................

               951    -   1001
UN11493        --> TTGTTTCTTGGTCTTGTTCTTACAAGAACAAAAATTGAGGATGGTCGGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721327       <-- TTGTTTCTTGGTCTTGTTCTTACAAGAACAAAAATTGAGGATGGTCGGTG
EX774098       <-- TTGTTTCTTGGTCTTGTTCTTACAAGAA-AAAAATTGAGATTGGTCGGTG
EV543401       <-- TTGTTTCTTGGTCTTGTTCTTACAAGAACAAAAATTGAGGATGGTCGGTG
FD529129       <-- TTGTTTCTTGGTCTTGTTCTTACAAGAACAAAAATTGAGAATGGTCGGTG
EV544665       <-- TTGTTTCTTGGTCTTGTTCTTACAAGAACAAAAATTGAGGATGGTCGGTG
FD545230       <-- TTGTTTCTTGGTCTTGTCCTTACAAGAACAAAAATTGAGGATGGTCGGTG
FD959175       <-- TTATTTCTTGGTCTTGTTCTTACAAGAACAAAAATTGAGGATGGTCGGTG
EW716875       --> ..................................................
EV549129       --> ..................................................
FD532752       --> ..................................................
EV547548       --> ..................................................
FD569770       --> ..................................................

               1001   -   1051
UN11493        --> GACCAAATAATGTCATTCACGTTTT-GAATTTTTATGGACTTATAAGTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721327       <-- GACCAAATAATGTCATTCACGTTTT-GAATTTTTATGGACTTATAAGTTC
EX774098       <-- GGCCAAATAATGTCATTCGCGTTTTTAAATTTTTATGGACTTATGAGTTC
EV543401       <-- GACCAAATAATGTCATTCACGTTTT-GAATTTTTATGGACTTATAAGTTC
FD529129       <-- GACCAAATAATGTCATTCACGTTTT-GAATTTTTATGGACTTATAAGTTC
EV544665       <-- GACCAAATAATG......................................
FD545230       <-- GACCAAATAATGTCATTCACGTTTT-GAATTTTTATGGACTTATAAGTTC
FD959175       <-- GACCAAATAATGTCATTCACGTTTT-GAATTTTTATGGACTTATAAGTTC
EW716875       --> ..................................................
EV549129       --> ..................................................
FD532752       --> ..................................................
EV547548       --> ..................................................
FD569770       --> ..................................................

               1051   -   1101
UN11493        --> TTAAGCAAAC
                   ~~~~~~~~~~
EW721327       <-- TTAAGCAAAC
EX774098       <-- TTg.......
EV543401       <-- TTAAac....
FD529129       <-- TTAAGC....
EV544665       <-- ..........
FD545230       <-- TTAAGC....
FD959175       <-- TTAAGC....
EW716875       --> ..........
EV549129       --> ..........
FD532752       --> ..........
EV547548       --> ..........
FD569770       --> ..........