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Alignment for radish unigene UN11854

               1      -     51
UN11854        --> GGCTCAGTTAGCAGCAAAGACGATTCCAAATCCCATCCACTGCCTATCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY919399       <-- ..................................................
FD529225       <-- ..................................................
EV532906       <-- ..................................................
EW720711       <-- ..................................................
EW716609       --> GGCTCAGTTAGCAGCAAAGACGATTCCAAATCCCATCCACTGCCTATCGA
FD532878       --> ..................................................
EY930823       --> ..................................................
FD570735       --> ..................................................
EV529079       --> ..................................................

               51     -    101
UN11854        --> TGCGCTTGACCATTGATTACTATCTTCTCACCGGAGAAAAGAAAGTTCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY919399       <-- ..................................................
FD529225       <-- ..................................................
EV532906       <-- ..................................................
EW720711       <-- ..................................................
EW716609       --> TGCGCTTGACCATTGATTACTATCTTCTCACCGGAGAAAAGAAAGTTCCC
FD532878       --> ..................................................
EY930823       --> ..................................................
FD570735       --> ..................................................
EV529079       --> ..................................................

               101    -    151
UN11854        --> TCGCCGTGAAAACCGAGAAAACCCTAATCTTTATCACTATGCCCTCTTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY919399       <-- ..................................................
FD529225       <-- ..................................................
EV532906       <-- ..................................................
EW720711       <-- ..................................................
EW716609       --> TCGCCGTGAAAACCGAGAAAACCCTAATCTCTACCACTATGCCCTCTTTT
FD532878       --> .......GAAAACCGAGAAAACCCAAATCTTTATCACTATGCCCTCTTTT
EY930823       --> ..................................................
FD570735       --> ..................................................
EV529079       --> ..................................................

               151    -    201
UN11854        --> CTGACAATGTGTTAGCTGCTTCAGTGGTTGTTAACTCAACCATCATGAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY919399       <-- ..................................................
FD529225       <-- ..................................................
EV532906       <-- ..................................................
EW720711       <-- ..................................................
EW716609       --> CTGACAATGTGTTAGCTGCTTCAGTGGTTGTTAACTCAACCATCATGAAT
FD532878       --> CTGACAATGTATTAGCTGCTTCAGTGGTTGTTAACTCAACCATCATCAAT
EY930823       --> ..................................................
FD570735       --> ..................................................
EV529079       --> ..................................................

               201    -    251
UN11854        --> GCAAAGGATCCTTCTAAGCATGTTTTTCACCTTGTGACGGATAAACTCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY919399       <-- ..................................................
FD529225       <-- ..................................................
EV532906       <-- ..................................................
EW720711       <-- ..................................................
EW716609       --> GCAAAGGATCCTTCGAAGCATGTTTTTCACCTTGTGACGGATAAACTCAA
FD532878       --> GCAAAGGATCCTTCTAAGCATGTTTTTCACCTTGTGACGGATAAACTCAA
EY930823       --> ..................................................
FD570735       --> ..................................................
EV529079       --> ..................................................

               251    -    301
UN11854        --> CTTCGCAGCAATGAACATGTGGTTCCTCCTAAACCCACCTGGAAAGGCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY919399       <-- ..................................................
FD529225       <-- ..................................................
EV532906       <-- ..................................................
EW720711       <-- ..................................................
EW716609       --> CTTCGCAGCAATGAACATGTGGTTCCTCCTAAACCCACCTGGAAAGGCAA
FD532878       --> CTTCGCAGCAATGAACATGTGGTTCCTCCTAAACCCACCTGGAAAGGCAA
EY930823       --> ..................................................
FD570735       --> ..................................................
EV529079       --> ..................................................

               301    -    351
UN11854        --> CCATACATGTGGAGAACGTGGATGAGTTCAAGTGGCTCAATTCATCTTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY919399       <-- ..................................................
FD529225       <-- ..................................................
EV532906       <-- ..................................................
EW720711       <-- ..................................................
EW716609       --> CCATACATGTGGAGAACGTGGATGAGTTCAAGTGGCTCAATTCATCTTAC
FD532878       --> CCATACATGTGGAGAACGTGGATGAGTTCAAGTGGCTCAATTCATCTTAC
EY930823       --> .........gGGAGAACGTGGATGAGTTCAAGTGGCTCAATTCATCTTAC
FD570735       --> ..................................................
EV529079       --> ..................................................

               351    -    401
UN11854        --> TGCCCTGTTCTTCGCCAGCTCGAATCTTCAGCAATGAAAGAATACTATTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY919399       <-- ..................................................
FD529225       <-- ..................................................
EV532906       <-- ..................................................
EW720711       <-- ..................................................
EW716609       --> TGCCCTGTTCTTCGCCAGCTCGAATCTTCAGCAATGAAAGAATACTATTT
FD532878       --> TGCCCTGTTCTTCGCCAGCTCGAATCTTCAGCAATGAAAGAATGCTATTT
EY930823       --> TGCCCTGTTCTTCGCCAGCTCGAATCTTCAGCAATGAAAGAATACTATTT
FD570735       --> ..................................................
EV529079       --> ..................................................

               401    -    451
UN11854        --> CAAAGCAGATCACCCAAGCTCAGGCTCTTCGAATCTCAAGTACAGAAACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY919399       <-- ..................................................
FD529225       <-- ..................................................
EV532906       <-- ..................................................
EW720711       <-- ..................................................
EW716609       --> CAAAGCAGATCACCCAAGCTCAGGCTCTTCGAATCTCAAGTACAGAAGCC
FD532878       --> CAAAGCAGATCACCCAAGCTCAGGCTCTTCGAATCTCAAGTACAGAAACC
EY930823       --> CAAAGCAGATCACCCAAGCTCAGGCTCTTCGAATCTCAAGTACAGAAACC
FD570735       --> ..................................................
EV529079       --> ..................................................

               451    -    501
UN11854        --> CGAAGTACCTTTCCATGTTAAATCACTTGAGATTCTATCTCCCTGATCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY919399       <-- ..............................................TCTT
FD529225       <-- ..................................................
EV532906       <-- ..................................................
EW720711       <-- ..................................................
EW716609       --> CGAAGTACCTTTCCATGTTAAATCACTTGAGATTCTATCTCCCTGATCTT
FD532878       --> CGAAGTACCTTTCCATGTTAAATCACTTGAGATTCTATCTCCCTGATCTT
EY930823       --> CGAAGTACCTTTCCATGTTAAATCACTTGAGATTCTATCTCCCTGATCTT
FD570735       --> ..................................................
EV529079       --> ..................................................

               501    -    551
UN11854        --> TATCCCAAGCTGAACAAGATCCTGTTCTTGGACGACGACATCATCGTCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY919399       <-- TATCCCAAGCTGAACAAGATCCTGTTCTTGGACGACGACATCATCGTTCA
FD529225       <-- ...........................TTGGACGACGACATCATCGTCCA
EV532906       <-- ..................................................
EW720711       <-- ..................................................
EW716609       --> TATCCCAAGCTGAACAAGATCCTGTTCTTGGACGACGACATCATCGTCCA
FD532878       --> TATCCCAAGCTGAACAAGATCCTGTTCTTGGACGACGACATCATCGTCCA
EY930823       --> TATCCCAAGCTGAACAAGATCCTGTTCTTGGACGACGACATCATCGTCCA
FD570735       --> .....................................gCATCATCGTCCA
EV529079       --> ..................................................

               551    -    601
UN11854        --> GAAAGACCTGACTCCGCTCTGGGAAGTCAACCTGAACGGAAAAGTCAACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY919399       <-- GAAAGACCTGACTCCGCTCTGGGAAGTCAACCTGAACGGCAAAGTCAACG
FD529225       <-- GAAAGACCTGACTCCGCTCTGGGAGGTCAACCTGAACGGAAAAGTCAACG
EV532906       <-- ..............................gCTGAACGGAAAAGTCAACG
EW720711       <-- ..................................................
EW716609       --> GAAAGACCTTACTCCGCTCTGGGAAGTCAACCTGAACGGAAAAGTCAACG
FD532878       --> GAAAGACCTGACTCCGCTCTGGGAGGTCAACCTGAACGGAAAAGTCAACG
EY930823       --> GAAAGACCTTACTCCGCTCTGGGAAGTCAACCTGAACGGAAAAGTCAACG
FD570735       --> GAAAGACCTGACTCCGCTCTGGGAAGTCAACCTGAACGGAAAAGTCAACG
EV529079       --> ..............................gCTGAACGGAAAAGTCAACG

               601    -    651
UN11854        --> GTGCAGTCGAAACCTGCGGGGAGAGTTTCCACAGGTTCGACAAGTATCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY919399       <-- GTGCAGTCGAAACCTGCGGGGAGAGTTTCCACAGGTTCGACAAGTATCTC
FD529225       <-- GTGCAGTCGAAACCTGCGGGGAGAGTTTCCACAGGTTCGACAAGTATCTC
EV532906       <-- GTGCAGTCGAAACCTGCGGGGAGAGTTTCCACAGGTTCGACAAGTATCTC
EW720711       <-- .....GTCGAAACCTGCGGGGAGAGTTTCCACAGGTTCGACAAGTATTTC
EW716609       --> GTGCAGTCGAAACCTGCGGGGAGAGTTTCCACAGGTTCGACAAGTATCTC
FD532878       --> GTGCAGTCGAAACCTGCGGGGAGAGTTTCCACAGGTTCGACAAGTATCTC
EY930823       --> GTGCAGTCGAAACCTGCGGGGAGAGTTTCCACAGGTTCGACAAGTATCTC
FD570735       --> GTGCAGTCGAAACCTGCGGGGAGAGTTTCCACAGGTTCGACAAGTATCTC
EV529079       --> GTGCAGTCGAAACCTGCGGGGAGAGTTTCCACAGGTTCGACAAGTATCTC

               651    -    701
UN11854        --> AACTTCTCGAACCCTCACATCGCCAGGAACTTCAATCCAAACGCTTGTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY919399       <-- AACTTCTCGAACCCTCACATCGCCAGGAACTTCAATCCAAACGCTTGTGG
FD529225       <-- AACTTCTCGAACCCTCACATCGCCAGGAACTTCAATCCAAACGCTTGTGG
EV532906       <-- AACTTCTCGAACCCTCACATCGCCAGGAACTTCAATCCAAACGCTTGTGG
EW720711       <-- AACTTCTCGAACCCTCACATCGCCAGGAACTTCAATCCAAACGCTTGTGG
EW716609       --> A-CTTCTCGAACCCTCACATCGCCAGGAACTTCA-TCCAAACGCTTGTGG
FD532878       --> AACTTCTCGAACCCTCACATCGCCAGGAACTTCAATCCAAACGCTTGTGG
EY930823       --> AACTTCTCGAACCCTCACATCGCCAGGAACTTCAATCCAAACGCTTGTGG
FD570735       --> AACTTCTCGAACCCTCACATCGCCAGGAACTTCAATCCAAACGCCTGTGG
EV529079       --> AACTTCTCGAACCCTCACATCGCCAGGAACTTCAATCCAAACGCTTGTGG

               701    -    751
UN11854        --> ATGGGCTTATGGGATGAACATGTTCGACCTAAAGGAGTGGAAGAAGAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY919399       <-- ATGGGCTTATGGGATGAACATGTTCGACCTAAAGGAGTGGAAGAAGAGAG  Raphanus raphanistrum subsp. landra
FD529225       <-- ATGGGCGTATGGGATGAACATGTTCGACCTAAAGGAGTGGAAGAAGAGAG  Raphanus raphanistrum subsp. maritimus
EV532906       <-- ATGGGCGTATGGGATGAACATGTTCGACCTAAAGGAGTGGAAGAAGAGAG  Raphanus raphanistrum subsp. maritimus
EW720711       <-- ATGGGCTTATGGGATGAACATGTTCGACCTTAAGGAGTGGAAGAAGAGAG  Raphanus sativus var. oleiformis
EW716609       --> ATGGGCTTATGGGATGA-CATGTTCGACCTTAAG-AGTGGAAGA-GAGAG  Raphanus sativus var. oleiformis
FD532878       --> ATGGGCGTATGGGATGAACATGTTCGACCTAAAGGAGTGGAAGAAGAGAG  Raphanus raphanistrum subsp. maritimus
EY930823       --> ATGGGCTTATGGGATGAACATGTTCGACCTTAAGGAGTGGAAGAAGAGAG  Raphanus sativus var. oleiformis
FD570735       --> ATGGGCTTATGGGATGAACATGTTCGACCTTAAGGAGTGGAAGAAGAGAG  Raphanus sativus cv Early Scarlet Globe
EV529079       --> ATGGGCGTATGGGATGAACATGTTCGACCTAAAGGAGTGGAAGAAGAGAG  Raphanus raphanistrum subsp. maritimus

               751    -    801
UN11854        --> ATATCACTGGTATCTACCATAAGTGGCAGAACATGAATGAGAACAGGACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY919399       <-- ATATCACTGGTATCTACCATAAGTGGCAGAACATGAATGAGAACAGGACA
FD529225       <-- ATATCACTGGTATCTACCATAAGTGGCAGAACATGAATGAGAACAGGACA
EV532906       <-- ATATCACTGGTATCTACCATAAGTGGCAGAACATGAATGAGAACAGGACA
EW720711       <-- ATATCACTGGTATTTACCATAAGTGGCAGAACATGAATGAGAACAGGACA
EW716609       --> ATATCACTGGTAT.....................................
FD532878       --> ATATCACTGGTATCTACCATAAGTGGCA......................
EY930823       --> ATATCACTGGTATCTACCATAAGTGGCAGAACATGAATGAGAACAGGACA
FD570735       --> ATATCACTGGTATCTACCATAAGTGGCAGAACATGAATGAGAACAGGACA
EV529079       --> ATATCACTGGTATCTACCATAAGTGGCAGAACATGAATGAGAACAGGACA

               801    -    851
UN11854        --> CTGTGGAAGCTAGGGACACTACCACCAGGATTAATAACGTTTTACGGACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY919399       <-- CTGTGGAAGCTAGGGACACTACCACCAGGATTAATAACGTTTTACGGACT
FD529225       <-- CTGTGGAAGCTAGGGACACTACCACCAGGATTAATAACGTTTTACGGACT
EV532906       <-- CTGTGGAAGCTAGGGACACTACCACCAGGATTAATAACGTTTTACGGACT
EW720711       <-- CTGTGGAAGCTAGGGACACTACCACCAGGATTAATAACGTTTTACGGACT
EW716609       --> ..................................................
FD532878       --> ..................................................
EY930823       --> CTGTGGAAGCTAGGGACACTACCACCAGGATTAATAACGTTTTACGGACT
FD570735       --> CTGTGGAAGCTAGGGACACTACCACCAGGATTAATAACGTTTTACGGACT
EV529079       --> CTGTGGAAGCTAGGGACACTACCACCAGGATTAATAACGTTTTACGGACT

               851    -    901
UN11854        --> AACACACCCTTTGGACAAGTCGTGGCACGTGTTGGGACTTGGTTATAACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY919399       <-- AACACACCCTTTAGACAAGTCGTGGCACGTGTTGGGACTTGGTTATAACC
FD529225       <-- AACACACCCTTTGGACAAGTCGTGGCACGTGTTGGGACTTGGTTATAACC
EV532906       <-- AACACACCCTTTGGACAAGTCGTGGCACGTGTTGGGACTTGGTTATAACC
EW720711       <-- AACACACCCTTTGGACAAGTCGTGGCACGTGTTGGGACTTGGTTATAACC
EW716609       --> ..................................................
FD532878       --> ..................................................
EY930823       --> AACACACCCTTTGGACAAGTCGTGGCACGTGTTGGGACTTGGTTATAACC
FD570735       --> AACACACCCTTTGGACAAGTCGTGGCACGTGTTGGGACTTGGTTATAACC
EV529079       --> AACACACCCTTTGGACAAGTCGTGGCACGTGTTGGGACTTGGTTATAACC

               901    -    951
UN11854        --> CGAGTATCGCGAAGAAAGACATTCAGAACGCAGCTGTGGTTCACTATAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY919399       <-- CGAGTATCGCGAAGAAAGACATTCAGAACGCAGCTGTGGTTCACTATAAC
FD529225       <-- CGAGTATCGCGAAGAAAGACATTCAGAACGCAGCTGTGGTTCACTATAAC
EV532906       <-- CGAGTATCGCGAAGAAAGACATTCAGAACGCAGCTGTGGTTCACTATAAC
EW720711       <-- CGAGTATCGGGAAGAAAGACATTCAGAACGCAGCTGTGGTTCACTATAAC
EW716609       --> ..................................................
FD532878       --> ..................................................
EY930823       --> CGAGTATCGCGAAGAAAGACATTCAGAACGCAGCTGTGGTTCACTATAAC
FD570735       --> CGAGTATCGCGAAGAAAGACATTCAGAACGCAGCTGTGGTTCACTATAAC
EV529079       --> CGAGTATCGCGAAGAAAGACATTCAGAACGCAGCTGTGGTTCACTATAAC

               951    -   1001
UN11854        --> GGGAACATGAAACCATGGTTGGAGTTGGCTATGTCTAAGTATCGACCGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY919399       <-- GGGAACATGAAACCATGGTTGGAGTTGGCTATGTCTAAGTATCGACCGTA
FD529225       <-- GGGAACATGAAACCATGGTTGGAGTTGGCTATGTCTAAGTATCGACCGTA
EV532906       <-- GGGAACATGAAACCATGGTTGGAGTTGGCTATGTCTAAGTATCGACCGTA
EW720711       <-- GGGAACATGAAACCATGGTTGGAGTTGGCTATGTTTAAGTATCGACCGTA
EW716609       --> ..................................................
FD532878       --> ..................................................
EY930823       --> GGGAACATGAAACCATGGTTGGAGTTGGCTATGTCTAAGTATCGACCGTA
FD570735       --> GGGAACATGAAACCATGGTTGGAGTTGGCTATGTCTAAGTATCGACCGTA
EV529079       --> GGGAACATGAAACCATGGTTGGAGTTGGCTATGTCTAAGTATCGACCGTA

               1001   -   1051
UN11854        --> TTGGACCAAGTACATCAAGTTTGATCACCCTTATCTTCGTAGATGCAACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY919399       <-- TTGGACCAAGTACATCAAGTTTGATCACCCTTATCTTCGTAGATGCAACC
FD529225       <-- TTGGACCAAGTACATCAAGTTTGATCACCCTTATCTTCGTAGATGCAACC
EV532906       <-- TTGGACCAAGTACATCAAGTTTGATCACCCTTATCTTCGTAGATGCAACC
EW720711       <-- TTGGACCAAGTACATCAAGTTTGATCACCCTTATTTTCGTAGATGCAACC
EW716609       --> ..................................................
FD532878       --> ..................................................
EY930823       --> TTGGAC-AAGTACATCAAGTTTGATCACCCTTATCTTCGTAGATGCAACC
FD570735       --> TTGGACCAAGTACATCAAGTTTGATCACCCTTATCTTCGTAGATGCAACC
EV529079       --> TTGGACCAAGTACATCAAGTTTGATCACCCTTATCTTCGTAGATGCAACC

               1051   -   1101
UN11854        --> TTCATGAATAAAATTAAATT-ATCAAATCGTTATTAGATGATTTGAGGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY919399       <-- TTCATGAATAAAATTAAATT-ATCAAATCGTTATTAGATGATTTGAGGTA  Raphanus raphanistrum subsp. landra
FD529225       <-- TTCATGAATAAAATTAAATTTATCAAATCGTTATTAGATGATTTGAGGTA  Raphanus raphanistrum subsp. maritimus
EV532906       <-- TTCATGAATAAAATTAAATTTATCAAATCGTTATTAGATGATTTGAGGTA  Raphanus raphanistrum subsp. maritimus
EW720711       <-- TTCATGAATAAAATTAAATT-ATCAAATCGTTATTAGATGATTTGAGGTA  Raphanus sativus var. oleiformis
EW716609       --> ..................................................  Raphanus sativus var. oleiformis
FD532878       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY930823       --> TTCATGAATAAAATTAAATT-ATCAA-TCGTT..................  Raphanus sativus var. oleiformis
FD570735       --> TTCATGAATAAAATTAAATT-ATCAAATCGTTATTAGATGATTTGAGGTA  Raphanus sativus cv Early Scarlet Globe
EV529079       --> TTCATGAATAAAATTAAATTTATCAAATCGTTATTAGATGATTTGAGGTA  Raphanus raphanistrum subsp. maritimus

               1101   -   1151
UN11854        --> ATTACTCGTAATCTTATGTTGTTTTCCCCATGGCGTTAATCTTTTATTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY919399       <-- ATTACTCGTAATCTTATGTTGTTTTCCCCATGGCGTTAATCTTTTATTTC
FD529225       <-- ATTACTCGTAATCTTATGATGTTTTCCCCATGGCGTTAATCTTTTATTTC
EV532906       <-- ATTACTCGTAATCTTATGTTGTTTTCCCCATGGCGTTAATCTTTTATTTC
EW720711       <-- ATTACTCGTAATCTTATGTTGTTTTCCCCATGGCGTTAATCTTTTATTTT
EW716609       --> ..................................................
FD532878       --> ..................................................
EY930823       --> ..................................................
FD570735       --> ATTACTCGTAATCTTATGTTGTTTTCCCCATGGCGTTAATCTTTTATTTC
EV529079       --> ATTACTCGTAATCTTATGTTGTTTTCCCCATGGCGTTAATCTTTTATTTC

               1151   -   1201
UN11854        --> TACACATTGTTTATTGTTTATTCATATCTTTCTTTAGTCATATTATTTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY919399       <-- TACACATTGTTTATTGTTTATTCATATCTTTCTTTAGac...........
FD529225       <-- TACACATTGTTTATTGTTTATTCATATCTTTCTTTAGTCATATTATTTTC
EV532906       <-- TACACAct..........................................
EW720711       <-- TACACATTGTTTATTGTTTATTCATATCTTTCTTTAGTCATATTATTTTC
EW716609       --> ..................................................
FD532878       --> ..................................................
EY930823       --> ..................................................
FD570735       --> TACACATTGTTTATTGTTTATTCATATCTTTCTTTAG.............
EV529079       --> TACACAct..........................................

               1201   -   1251
UN11854        --> TTACTTTCGGGTTCAAAGCACTTTTGTTATTCCGAAGTTTAATCGATAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY919399       <-- ..................................................
FD529225       <-- TTACTTTCGGGTTAAAAGCACTTTTGTTATTCCGAAGTTTAATCGATAAT
EV532906       <-- ..................................................
EW720711       <-- TTACTTTCGGGTTCAAAGCACTTTTGTTATTCCGAAGTTT..........
EW716609       --> ..................................................
FD532878       --> ..................................................
EY930823       --> ..................................................
FD570735       --> ..................................................
EV529079       --> ..................................................

               1251   -   1301
UN11854        --> AT
                   ~~
EY919399       <-- ..
FD529225       <-- AT
EV532906       <-- ..
EW720711       <-- ..
EW716609       --> ..
FD532878       --> ..
EY930823       --> ..
FD570735       --> ..
EV529079       --> ..