1 - 51
UN12375 --> ATAACTTTTGATTTTATGGTTATTTCGTATAAAATTCTAGCTGACAATAC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD561642 <-- ATAACTTTTGATTTTATGGTTATTTCGTATAAAATTCTAGCTGACAATAC
EY941296 <-- ...............ATGGTTATCTCGTATAAAATTCTAGCTGACAATAC
EW726631 <-- ..................................................
EW716742 <-- ..................................................
EY930930 <-- ..................................................
FD563539 <-- ..................................................
FD560752 <-- ..................................................
FD979324 <-- ..................................................
EW729267 --> ..................................................
EW720953 --> ..................................................
FD567153 --> ..................................................
FD565097 --> ..................................................
51 - 101
UN12375 --> AATTTTTTTTAGTTGAATACAATTTTAGATATTATTACTACTTTTTTATT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD561642 <-- AATTTTTTTTAGTTGAATACAATTTTAGATATTATTACTACTTTTTTATT Raphanus sativus var. oleiformis
EY941296 <-- AATTTTTTTTAGTTGAATACAATTTTAGATATTATTACTACTTTTTGATT Raphanus sativus cv Early Scarlet Globe
EW726631 <-- ..........cGTTGAATACAATTTTAGATATTATTACTACTTTTTGATT Raphanus sativus cv Early Scarlet Globe
EW716742 <-- .................................cTTACTACTTTTTTATT Raphanus sativus var. oleiformis
EY930930 <-- ....................................ACTACTTTTTTATT Raphanus sativus var. oleiformis
FD563539 <-- .................................................. Raphanus sativus var. oleiformis
FD560752 <-- .................................................. Raphanus sativus var. oleiformis
FD979324 <-- .................................................. Raphanus raphanistrum subsp. raphanistrum (NY)
EW729267 --> ..........cGTTGAATACAATTTTAGATATTATTACTACTTTTTGATT Raphanus sativus cv Early Scarlet Globe
EW720953 --> .................................cTTACTACTTTTTTATT Raphanus sativus var. oleiformis
FD567153 --> .................................................. Raphanus sativus var. oleiformis
FD565097 --> .................................................. Raphanus sativus var. oleiformis
101 - 151
UN12375 --> CATATCTCTTCGGTCAGGAAAGAAAAATAATTATATAATACATACAGTTC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD561642 <-- CATATCTCTTC--GCAGGAAAGAAAAATAATTATATAATACATACAGTTC Raphanus sativus var. oleiformis
EY941296 <-- CATATCTCTTCGGCCAGGAAAGAAAAATTATTATATAGTACATACAGTTC Raphanus sativus cv Early Scarlet Globe
EW726631 <-- CATATCTCTTCGGCCAGGAAAGAAAAATTATTATATAGTACATACAGTTC Raphanus sativus cv Early Scarlet Globe
EW716742 <-- CATATCTCTTCGGTCAGGAAAGAAAAATAATTATATAATACATACAGTTC Raphanus sativus var. oleiformis
EY930930 <-- CATATCTCTTCGGTCAGGAAAGAAAAATAATTATATAATACATACAGTTC Raphanus sativus var. oleiformis
FD563539 <-- ..........CGGTCAGGAAAGAAAAATAATTATATAATACATACAGTTC Raphanus sativus var. oleiformis
FD560752 <-- .................................................c Raphanus sativus var. oleiformis
FD979324 <-- .................................................. Raphanus raphanistrum subsp. raphanistrum (NY)
EW729267 --> CATATCTCTTCGGCCAGGAAAGAAAAATTATTATATAGTACATACAGTTC Raphanus sativus cv Early Scarlet Globe
EW720953 --> CATATCTCTTCGGTCAGGAAAGAAAAATAATTATATAATACATACAGTTC Raphanus sativus var. oleiformis
FD567153 --> ..........CGGTCAGGAAAGAAAAATAATTATATAATACATACAGTTC Raphanus sativus var. oleiformis
FD565097 --> .................................................c Raphanus sativus var. oleiformis
151 - 201
UN12375 --> TAGAAAATTATATAGCAGTTTATTGACGTTTG-TATATCTGTCTCCCTTT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD561642 <-- TAGAAAATTATATAGCAGTTTATTGACGTTTG-TATATCTGTCTCCCTTT
EY941296 <-- TAGAAAATTATATAGCAGTTTATTGGCGTTTGATACATCTGTCTCCCTTT
EW726631 <-- TAGAAAATTATATAGCAGTTTATTGGCGTTTGATATATCTGTCTCCCTTT
EW716742 <-- TAGAAAATTATACAGCAGTTTATTGACGTTTG-TATATCTGTCTCCCTTT
EY930930 <-- TAGAAAATTATATAGCAGTTTATTGACGTTTG-TATATCTGTCTCCCTTT
FD563539 <-- TAGAAAATTATATAGCAGTTTATTGACGTTTG-TATATCTGTCTCCCTTT
FD560752 <-- cAGAAAATTATATAGCAGTTTATTGACATTTG-TATATCTGTCTCCCTTT
FD979324 <-- ..................................................
EW729267 --> TAGAAAATTATATAGCAGTTTATTGGCGTTTGATATATCTGTCTCCCTTT
EW720953 --> TAGAAAATTATACAGCAGTTTATTGACGTTTG-TATATCTGTCTCCCTTT
FD567153 --> TAGAAAATTATATAGCAGTTTATTGACGTTTG-TATATCTGTCTCCCTTT
FD565097 --> caaAAAATTATATAGCAGTTTATTGACATTTG-TATATCTGTCTCCCTTT
201 - 251
UN12375 --> TCCCCTTTTAAAAAAAAAA--CCATGCATGATACAATTGTATAGTGACCC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD561642 <-- TCCCCTTTTAAAAAAAAA---CCATGCATGATACAATTGTATAGTGACCC
EY941296 <-- TCCCCTTTTAAAAAAAAAAAACCATGCATGATACAATTGTATAGTGACCC
EW726631 <-- TCCCCTTTTAAAAAAAAAA--CCATGCATGATACAATTGTATAGTGACCC
EW716742 <-- TCCCCTTTTAAAAAAAAA---CCATGCATGATACAATTGTATAGTGACCC
EY930930 <-- TCCCCTTTTAAAAAAAAA---CCATGCATGATACAATTGTATAGTGACCC
FD563539 <-- TCCCCTTTTAAAAAAAAAA--CCATGCATGATACAATTGTATAGTGACCC
FD560752 <-- TCCCCTTTTAAAAAAAAAA--CCATGCATGATACAATTGTATAGTGACCC
FD979324 <-- ..................................................
EW729267 --> TCCCCTTTTAAAAAAAAAA--CCATGCATGATACAATTGTATAGTGACCC
EW720953 --> TCCCCTTTTAAAAAAAAA---CCATGCATGATACAATTGTATAGTGACCC
FD567153 --> TCCCCTTTTAAAAAAAAAA--CCATGCATGATACAATTGTATAGTGACCC
FD565097 --> TCCCCTTTTAAAAAAAAAA--CCATGCATGATACAATTGTATAGTGACCC
251 - 301
UN12375 --> AGCTCTTTTTTT--AATTATAATTATGTTCTATAATTAATTAACGTCATC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD561642 <-- AGCTCTTTTTTT--AATTATAATTATGTTCTATAATTAATTAACGTCATC
EY941296 <-- AGCTCTTTTTTTTTAATTATAATTATGTTCTATAATTAATTAACGTCATC
EW726631 <-- AGCTCTTTTTTT-TAATTATAATTATGTTCTATAATTAATTAACGTCATC
EW716742 <-- AGCTCTTTTTTT--AATTATAATTATGTTCTATAATTAATTAACGTCATC
EY930930 <-- AGCTCTTTTTTT--AATTATAATTATGTTCTATAATTAATTAACGTCATC
FD563539 <-- AGCTCTTTTTTT--AATTATAATTATGTTCTATAATTAATTAACGTCATC
FD560752 <-- AGCTCTTTTTT---AATTATAATTATGTTCTATAATTAATTAACGTCATC
FD979324 <-- ..................................................
EW729267 --> AGCTCTTTTTTT-TAATTATAATTATGTTCTATAATTAATTAACGTCATC
EW720953 --> AGCTCTTTTTTT--AATTATAATTATGTTCTATAATTAATTAACGTCATC
FD567153 --> AGCTCTTTTTTT--AATTATAATTATGTTCTATAATTAATTAACGTCATC
FD565097 --> AGCTCTTTTTT---AATTATAATTATGTTCTATAATTAATTAACGTCATC
301 - 351
UN12375 --> TAATATACGGGAACAAGCAGCTTGAACGACTAAGCCAATGGCGGGTCCTC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD561642 <-- TAATATACGGGAACAAGCAGCTTGAACGACTAAGCCAATGGCGGGTCCTC
EY941296 <-- TAATATACGGGAACAAGCAGCTTGAACGACTAAGCCAATGGCGGGTCCTC
EW726631 <-- TAATATACGGGAACAAGCAGCTTGAACGACTAAGCCAATGGCGGGTCCTC
EW716742 <-- TAATATACGGGAACAAGCAGCTTGAACGACTAAGCCAATGGCGGGTCCTC
EY930930 <-- TAATATACGGGAACc...................................
FD563539 <-- TAATATACGGGAACAAGCAGCTTGAACGACTAAGCCAATGGCGGGTCCTC
FD560752 <-- TAATATACGGGAACAAGCAGCTTGAACGACTAAGCCAATGGCGGGTCCTC
FD979324 <-- ..................................................
EW729267 --> TAATATACGGGAACAAGCAGCTTGAACGACTAAGCCAATGGCGGGTCCTC
EW720953 --> TAATATACGGGAACAAGCAGCTTGAACGACTAAGCCAATGGCGGGTCCTC
FD567153 --> TAATATACGGGAACAAGCAGCTTGAACGACTAAGCCAATGGCGGGTCCTC
FD565097 --> TAATATACGGGAACAAGCAGCTTGAACGACTAAGCCAATGGCGGGTCCTC
351 - 401
UN12375 --> CGGAGAAGATAATCGGCAAACAGTCATTGGCGAGGCCACGAATGGCGTCG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD561642 <-- CGGAGAAGATAATCGGCAAACAGTCATTGGCGAGGCCACGAATGGCGTCG
EY941296 <-- CGGAGAAGATAATCGGCAAACAGTCATTGGCGAGGCCATGAATGGCGTCG
EW726631 <-- CGGAGAAGATAATCGGCAAACAGTCATTGGCGAGGCCACGAATGGCGTCG
EW716742 <-- CGGAGAAGATAATCGGCAAACAGTCATTGGCGAGGCCACGAATGGCGTCG
EY930930 <-- ..................................................
FD563539 <-- CGGAGAAGATGATCGGCAAACAGTCATTGGCGAGGCCACGAATGGCGTCG
FD560752 <-- CGGAGAAGATAATCGGCAAACAGTCATTGGCGAGGCCACGAATGGCGTCG
FD979324 <-- ..................................................
EW729267 --> CGGAGAAGATAATCGGCAAACAGTCATTGGCGAGGCCACGAATGGCGTCG
EW720953 --> CGGAGAAGATAATCGGCAAACAGTCATTGGCGAGGCCACGAATGGCGTCG
FD567153 --> CGGAGAAGATGATCGGCAAACAGTCATTGGCGAGGCCACGAATGGCGTCG
FD565097 --> CGGAAAAAATAATCGGCAAACAGTCATTGGCGAGGCCACGAATGGCGTCC
401 - 451
UN12375 --> CAGCATTCCTTATCCAAACCATGATTGTCTCCCTTTGTAGCTTTCTCTAT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD561642 <-- CAGCATTCCTTATCCAAACCATGATTGTCTCCCTTTGTAGCTTTCTCTAT
EY941296 <-- CAGCATTCCTTATCCAAACCATGATTGTCTCCCTTTGTAGCTTTCTCTAT
EW726631 <-- CAGCATTCCTTATCCAAACCATGATTGTCTCCCTTTGTAGCTTTCTCTAT
EW716742 <-- CAGCATTCCTTATCCAAACCATGATTGTCTCCCTTTGTAGCTTTCTCTAT
EY930930 <-- ..................................................
FD563539 <-- CAGCATTCCTTATCCAAACCATGATTGTCTCCCTTTGTAGCTTTCTCTAT
FD560752 <-- CAGCATTCCTTATCCAAACCATGATTGTCTCCCTTTGTAGCTTTCTCTAT
FD979324 <-- ..................................................
EW729267 --> CAGCATTCCTTATCCAAACCATGATTGTCTCCCTTTGTAGCTTTCTCTAT
EW720953 --> CAGCATTCCTTATCCAAACCATGATTGTCTCCCTTTGTAGCTTTCTCTAT
FD567153 --> CAGCATTCCTTATCCAAACCATGATTGTCTCCCTTTGTAGCTTTCTCTAT
FD565097 --> CAGCATTCCTTATCCAAACCATGATTGTCTCCCTTTGTAGCTTTCTCTAT
451 - 501
UN12375 --> GGCCTCCATACAACCCTCAACGCTCCTTAGTGATACAATGCATTTCAGTC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD561642 <-- GGCCTCCATACAACCCTCAACGCTCCTTAGTGATACAATGCATTTCAGTC
EY941296 <-- GGCCTACATACAACCCTCAACGCTCCTTAGTGATACAATGCATTTCAGTC
EW726631 <-- GGCCTCCATACAACCCTCAACGCTCCTTAGTGATACAATGCATTTCAGTC
EW716742 <-- GGCCTCCATACAACCCTCAACGCTCCTTAGTGATACAATGCATTTCAGTC
EY930930 <-- ..................................................
FD563539 <-- GGCCTCCATACAACCCTCAACGCTCCTTAGTGATACAATGCATTTCAGTC
FD560752 <-- GGCCTCCATACAACCCTCAACGCTCCTTAGTGATACAATGCATTTCAGTC
FD979324 <-- ..................................................
EW729267 --> GGCCTCCATACAACCCTCAACGCTCCTTAGTGATACAATGCATTTCAGTC
EW720953 --> GGCCTCCATACAACCCTCAACGCTCCTTAGTGATACAATGCATTTCAGTC
FD567153 --> GGCCTCCATACAACCCTCAACGCTCCTTAGTGATACAATGCATTTCAGTC
FD565097 --> GGCCTCCATACAACCCTCAACGCTCCTTAGTGATACAATGCATTTCAGTC
501 - 551
UN12375 --> GACCAATATATGGCATAGCTTCTGATTGATGATGACAAACCAAAGCCATA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD561642 <-- GACCAATATATGGCATAGCTTCTGATTGATGATGACAAACCAAAGCCATA
EY941296 <-- GACCAATATATGGCATAGCTTCTGATTGATGATGACAAACCAAAGCCATA
EW726631 <-- GACCAATATATGGCATAGCTTCTGATTGATGATGACAAACCAAAGCCATA
EW716742 <-- GACCAATATATGGCATAGCTTCTGATTGATGATGACAAACCAAAGCCATA
EY930930 <-- ..................................................
FD563539 <-- GACCAATATATGGCATAGCTTCTGATTGATGATGACAAACCAAAGCCATA
FD560752 <-- GACCAATATATGGCATAGCTTCTGATTGATGATGACAAACCAAAGCCATA
FD979324 <-- ......................................ACCAAAGCCATA
EW729267 --> GACCAATATATGGCATAGCTTCTGATTGATGATGACAAACCAAAGCCATA
EW720953 --> GACCAATATATGGCATAGCTTCTGATTGATGATGACAAACCAAAGCCATA
FD567153 --> GACCAATATATGGCATAGCTTCTGATTGATGATGACAAACCAAAGCCATA
FD565097 --> GACCAATATATGGCATAGCTTCTGATTGATGATGACAAACCAAAGCCATA
551 - 601
UN12375 --> ATCATTGTTAAGATAAAGAACATAGCTTTGATCTGCTTCGGCTCCATTTC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD561642 <-- ATCATTGTTAAGATAAAGAACATAGCTTTGATCTGCTTCGGCTCCATTTC
EY941296 <-- ATCATTGTTAAGATAAAGAACATAGCTTTGATCTGCTTCGGCTCCATTTC
EW726631 <-- ATCATTGTTAAGATAAAGAACATAGCTTTGATCTGCTTCGGCTCCATTTC
EW716742 <-- ATCATTGTTAAGATAAAGAACATAGCTTTGATCTGCTTCGGCTCCATTTC
EY930930 <-- ..................................................
FD563539 <-- ATCATTGTTAAGATAAAGAACATAGCTTTGATCTGTTTCGGCTCCATTTC
FD560752 <-- ATCATTGTTAAGATAAAGAACATAGCTTTGATCTGCTTCGGCTCCATTTC
FD979324 <-- ATCATTGTTAAGAAAAAGAACATAGCTTTGATCTGCTTCGGCTCCATTTC
EW729267 --> ATCATTGTTAAAATAAAGAACATAGCTTTGATCTGCTTCGGCTCCATTTC
EW720953 --> ATCATTGTTAAGATAAAGAACATAGCTTTGATCTGCTTCGGCTCCATTTC
FD567153 --> ATCATTGTTAAAATAAAGAACATAGCTTTGATCTGTTTCGGCTCCATTTC
FD565097 --> ATCATTG...........................................
601 - 651
UN12375 --> TATTAATTCGAGAGAGACAAAACAAAAACAAAATAACAATATGGTTTCTT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD561642 <-- TATTAATTCGAGAGAGACAAAACAAAAACAAAATAACAATATGGTTTCTT
EY941296 <-- TATTAATTCGAGAGAG..................................
EW726631 <-- TATTAATTCGAGAGAGACAAAACAAAAACAAAATAACAATATGGTTTCTT
EW716742 <-- TATTAATTCGAGAGAGACAAAACAAAAACAAAATAACAATATGGTTTCTT
EY930930 <-- ..................................................
FD563539 <-- TATTAATTCGAGAGAGACAAAACAAAAA......................
FD560752 <-- TATTAATTCGAGAGAGACAAAACAAAAACAAAATAACAATATGGTTTCTT
FD979324 <-- TATTAATTCGAGAGAGACAAAACAAAAACAAAATAACAATATGGTTTCTT
EW729267 --> TATTAATTCGAGAGAGACAAAAC...........................
EW720953 --> TATTAATTCGAGAGAGACAAAACAAAAACAAAATAACAATATGGTTTCTT
FD567153 --> TATTAATTCGAGAGAGACAAAACAAAAA......................
FD565097 --> ..................................................
651 - 701
UN12375 --> TTAGATCTCGTTGTGTTGAGAAGTGAATTCTTTC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD561642 <-- TTAGATCcc.........................
EY941296 <-- ..................................
EW726631 <-- TTAGATCTtcc.......................
EW716742 <-- TTAGATCTCGTTGTGTTGAGAAGTGAATTCTTTC
EY930930 <-- ..................................
FD563539 <-- ..................................
FD560752 <-- TTAGATCTCc........................
FD979324 <-- TTAGATCTtcc.......................
EW729267 --> ..................................
EW720953 --> TTAGATCTCGTTGTGTTGAGAAGTGAATTCTTTC
FD567153 --> ..................................
FD565097 --> ..................................
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