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Alignment for radish unigene UN12664

               1      -     51
UN12664        --> GGGACCAAAGAAGTTCAAAA-CAAAAACAAAAGAAGTGTTGAAAAAAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD572555       --> GGGACCAAAGAAGTTCAAAAACAAAAACAAAAGAAGTGTTGAAAAAAAAC  Raphanus sativus cv Early Scarlet Globe
FD965671       --> GGGACCAAAGAAGTTCAAAAACAAAAACAAAAGAAGTGTTGAAAAAAAAA  Raphanus raphanistrum subsp. maritimus
EX746310       --> .GGACCAAAGAAGTTCAAAAACAAAAACAAAAGAAGTGTTGAAAAAAAAA  Raphanus raphanistrum subsp. maritimus
EY945831       --> .GGACCAAAGAAGTTCAAAA-CAAAAACAAAAGAAGTGTTGAAAAAAAAA  Raphanus sativus cv Rat-Tail Radish #3870
FD564246       --> .GGACCAAAGAAGTTCAAAA-CAAAAACAAAAGAAGTGTTGAAAAAAAAA  Raphanus sativus var. oleiformis
FD955438       --> .GGACCAAAGAAGTTCAAAA-CAAAAACAAAAGAAGTGTTGAAAAAAAAA  Raphanus sativus cv Rat-Tail Radish #3870
EX903545       --> ...ggaAAAGAAGTTCAAAA-CAAAAACAAAAGAAGTGTTGAAAAAAAAA  Raphanus sativus cv Rat-Tail Radish #3870
FD562182       --> ....ggAAAGAAGTTCAAAA-CAAAAACAAAAGAAGTGTTGAAAAAAAAA  Raphanus sativus var. oleiformis
FD940427       --> ....ggAAAGAAGTTCAAAA-CAAAAACAAAAGAAGTGTTGAAAAAAAAA  Raphanus sativus var. oleiformis
FD949835       --> ...ggaAAAGAAGTTCAAAAACAAAAACAAAAGAAGTGTTGAAAAAAAAA  Raphanus sativus cv Early Scarlet Globe
EY898217       --> ..........ggGTTCAAAAACAAAAACAAAAGAAGTGTTGAAAAAAAAA  Raphanus raphanistrum subsp. maritimus
FD570694       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               51     -    101
UN12664        --> -ACA-AAAAAAAAACAATAAGAAGAAGAACAAGAATGTCGTTTTCTGGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD572555       --> -A-A-AAAAAAAAACAATAAGAAGAAGAACAAGAATGTCGTTTTCTGGAT
FD965671       --> -AAC-AAAAAAAAACAATAAGAAGAAGAACAAGAATGTCGTTTTCTGGAT
EX746310       --> -AAACAAAAAAAAACAATAAGAAGAAGAACAAGAATGTCGTTTTCTGGAT
EY945831       --> --CA-AAAAAAAAACAATAAGAAGAAGAACAAGAATGTCGTTTTCTGGAT
FD564246       --> -ACA-AAAAAAAAACAATAAGAAGAAGAACAAGAATGTCGTTTTCTGGAT
FD955438       --> CAAA-AAAAAAAAACAATAAGAAGAAGAACAAGAATGTCGTTTTCTGGAT
EX903545       --> -ACA-AAAAAAAAACAATAAGAAGAAGAACAAGAATGTCGTTTTCTGGAT
FD562182       --> -CAA-AAAAAAAAACAATAAGAAGAAGAACAAGAATGTCGTTTTCTGGAT
FD940427       --> --CA-AAAAAAAAACAATAAGAAGAAGAACAAGAATGTCGTTTTCTGGAT
FD949835       --> --CA-AAAAAAAAACAATAAGAAGAAGAACAAGAATGTCGTTTTCTGGAT
EY898217       --> -ACA-AAAAAAAAACAATAAGAAGAA---CAAGAATGTCGTTTTCTGGAT
FD570694       --> ..................................................

               101    -    151
UN12664        --> ATAGCTTCGTCGTAGTAACATTACTCTCCGTCGTCTTAACTCAAATCTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD572555       --> ATAGCTTCGTCGTAGTAACATTACTCTCCGTCGTCTTAACTCAAATCTAT
FD965671       --> ATAGCTTCGTCGTAGTAACATTACTCTCCGTCGTCTTAACTCAAATCTAT
EX746310       --> ATAGCTTCGTCGTAGTAACATTACTCTCCGTCGTCTTAACTCAAATCTAT
EY945831       --> ATAGCTTCGTCGTAGTAACATTACTCTCCGTCGTCTTAACTCAAATCTAT
FD564246       --> ATAGCTTCGTCGTAGTAACATTACTCTCCGTCGTCTTAACTCAAATCTAT
FD955438       --> ATAGCTTCGTCGTAGTAACATTACTCTCCGTCGTCTTAACTCAAATCTAT
EX903545       --> ATAGCTTCGTCGTAGTAACATTACTCTCCGTCGTCTTAACTCAAATCTAT
FD562182       --> ATAGCTTCGTCGTAGTAACATTACTCTCCGTCGTCTTAACTCAAATCTAT
FD940427       --> ATAGCTTCGTCGTAGTAACATTACTCTCCGTCGTCTTAACTCAAATCTAT
FD949835       --> ATAGCTTCGTCGTAGTAACATTACTCTCCGTCGTCTTAACTCAAATCTAT
EY898217       --> ATAGCTTCGTCGTAGTAACATTACTCTCCGTCGTCTTAACTCAAATCTAT
FD570694       --> ................AACATTACTCTCCATCGTCTTAACTCAAATCTAT

               151    -    201
UN12664        --> GGTTCCTGTAATGACCCACAGGCTGAACCCCAACCGGCAGCAATGTCAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD572555       --> GGTTCCT--AATGACCCACAGGCTGAACCCCAACCGGCAGCAATGTCAGG
FD965671       --> GGTTCCTGTAATGACCCACAGGCTGAACCCCAACCGGCAGCAATGTCAGG
EX746310       --> GGTTCCTGTAATGACCCACAGGCTGAACCCCAACCGGCAGCAATGTCAGG
EY945831       --> GGTTCCTGTAATGACCCACAGGCTGAACCCCAACCGGCAGCAATGTCAGG
FD564246       --> GGTTCCTGTAATGACCCACAGGCTGAACCCCAACCGGCAGCAATGTCAGG
FD955438       --> GGTTCCTGTAATGACCCACAGGCTGAACCCCAACCGGCAGCAATGTCAGG
EX903545       --> GGTTCCTGTAATGACCCACAGGCTGAACCCCAACCGGCAGCAATGTCAGG
FD562182       --> GGTTCCTGTAATGACCCACAGGCTGAACCCCAACCGGCAGCAATGTCAGG
FD940427       --> GGTTCCTGTAATGACCCACAGGCTGAACCCCAACCGGCAGCAATGTCAGG
FD949835       --> GGTTCCTGTAATGACCCACAGGCTGAACCCCAACCGGCAGCAATGTCAGG
EY898217       --> --TTCCTGTAATTACCCACAGGCTGAACCCCAACCGGCAGCAATGTCAGG
FD570694       --> GGTTCCTGTAATGACCCACAGGCTGAACCCCAACCGGCAGCAATGTCAGG

               201    -    251
UN12664        --> GCATAATGCTCATCCCCAACCGGCAGCAACGTCAGGGCTTAATGCTCATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD572555       --> GCATAATGCTCATCCCCAACCGGCAGCAACGTCAGGGCTTAATGCTCATC  Raphanus sativus cv Early Scarlet Globe
FD965671       --> GCATAATGCTCATCCCCAACCGGCAGCAACGTCAGGGCTTAATGCTCATC  Raphanus raphanistrum subsp. maritimus
EX746310       --> GCATAATGCTCATCCCCAACCGGCAGCAACGTCAGGGCTTAATGCTCATC  Raphanus raphanistrum subsp. maritimus
EY945831       --> GCATAATGCTCATCCCCAACCGGCAGCAACGTCAGGGCTTAATGCTCATT  Raphanus sativus cv Rat-Tail Radish #3870
FD564246       --> GCATAATGCTCATCCCCAACCGGCAGCAACGTCAGGGCTTAATGCTCATT  Raphanus sativus var. oleiformis
FD955438       --> GCATAATGCTCATCCCCAACCGGCAGCAACGTCAGGGCTTAATGCTCATT  Raphanus sativus cv Rat-Tail Radish #3870
EX903545       --> GCATAATGCTCATCCCCAACCGGCAGCAACGTCAGGGCTTAATGCTCATT  Raphanus sativus cv Rat-Tail Radish #3870
FD562182       --> GCATAATACTCATCCCCAACCGGCAGCAACGTCAGGGCTTAATGCTCATT  Raphanus sativus var. oleiformis
FD940427       --> GCATAATGCTCATCCCCAACCGGCAGCAACGTCAGGGCTTAATGCTCATT  Raphanus sativus var. oleiformis
FD949835       --> GCATAATGCTCATCCCCAACCGGCAGCAACGTCAGGGCTTAATGCTCATC  Raphanus sativus cv Early Scarlet Globe
EY898217       --> GCATAATGCTCATCCCCAACCGGCAGCAACGTCAGGGCTTAATGCTCATC  Raphanus raphanistrum subsp. maritimus
FD570694       --> GCATAATGCTCATCCCCAACCGGCAGCAACGTCAGGGCTTAATGCTCATC  Raphanus sativus cv Early Scarlet Globe

               251    -    301
UN12664        --> TTCAACCGGCAGCAAGGTCAGGGCTTAAGGCTCATCCCCAACCGGCAGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD572555       --> CTCAACCGGCAGCAAGGTCAGGGCTTAAGGCTCATCCCCAACCGGCAGCA  Raphanus sativus cv Early Scarlet Globe
FD965671       --> CTCAACCGGCAGCAAGGTCAGGGCTTAAGGCTCATCCCCAACCGGCAGCA  Raphanus raphanistrum subsp. maritimus
EX746310       --> CTCAACCGGCAGCAAGGTCAGGGCTTAAGGCTCATCCCCAACCGGCAGCA  Raphanus raphanistrum subsp. maritimus
EY945831       --> TTCAACCGGCAGCAAGGTCAGGGCTTAAGGCTCATCCCCAACCGGCAGCA  Raphanus sativus cv Rat-Tail Radish #3870
FD564246       --> TTCAACCGGCAGCAAGGTCAGGGCTTAAGGCTCATCCCCAACCGGCAGCA  Raphanus sativus var. oleiformis
FD955438       --> TTCAACCGGCAGCAAGGTCAGGGCTTAAGGCTCATCCCCAACCGGCAGCA  Raphanus sativus cv Rat-Tail Radish #3870
EX903545       --> TTCAACCGGCAGCAAGGTCAGGGCTTAAGGCTCATCCCCAACCGGCAGCA  Raphanus sativus cv Rat-Tail Radish #3870
FD562182       --> TTCAACCGGCAGCAAGGTCAGGGCTTAAGGCTCATCCCCAACCGGCAGCA  Raphanus sativus var. oleiformis
FD940427       --> TTCAACCGGCAGCAAGGTCAGGGCTTAAGGCTCATCCCCAACCGGCAGCA  Raphanus sativus var. oleiformis
FD949835       --> CTCAACCGGCAGCAAGGTCAGGGCTTAAGGCTCATCCCCAACCGGCAGCA  Raphanus sativus cv Early Scarlet Globe
EY898217       --> CTCAACCGGCAGCAAGGTCAGGGCTTAAGGCTCATCCCCAACCGGCAGCA  Raphanus raphanistrum subsp. maritimus
FD570694       --> CTCAACCGGCAGCAAGGTCAGGGCTTAAGGCTCATCCCCAACCGGCAGCA  Raphanus sativus cv Early Scarlet Globe

               301    -    351
UN12664        --> ACCTTAGGGCTTAACACCCTAGGTCGAACCAACTTAGACCCAATGTTTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD572555       --> ACCTTAGGGCTTAACACCCTAGGTCGAACCAACTTAGACCCAATGTTTGA
FD965671       --> ACCTTAGGGCTTAACACCCTAGGTCGAACCAACCTAGACCCAATGTTTGA
EX746310       --> ACCTTAGGGCTTAACACCCTAGGTCGAACCAACTTAGACCCAATGTTTGA
EY945831       --> ACCTTAGGGCTTAACACCCTAGGTCGAACCAACTTAGACCCAATGTTTGA
FD564246       --> ACCTTAGGGCTTAACACCCTAGGTCGAACCAACTTAGACCCAATGTTTGA
FD955438       --> ACCTTAGGGCTTAACACCCTAGGTCGAACCAACTTAGACCCAATGTTTGA
EX903545       --> ACCTTAGGGCTTAACACCCTAGGTCGAACCAACTTAGACCCAATGTTTGA
FD562182       --> ACCTTAGGGCTTAACACCCTAGGTCGAACCAACTTAGACCCAATGTTTGA
FD940427       --> ACCTTAGGGCTTAACACCCTAGGTCGAACCAACTTAGACCCAATGTTTGA
FD949835       --> ACCTTAGGGCTTAACACCCTAGGTCGAACCAACTTAGACCCAATGTTTGA
EY898217       --> ACCTTAGGGCTTAACACCCTAGGTCGAACCAACTTAGACCCAATGTTTGA
FD570694       --> ACCTTAGGGCTTAACACCCTAGGTCGAACCAACTTAGACCCAATGTTTGA

               351    -    401
UN12664        --> TCTCAACCCGGCAGCAACTTTATTGGTTCACAATCAGGTTCGAGCCGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD572555       --> TCTCAACCCGGCAGCAACTTTATTGGTTCACAATCAGGTTCGAGCCGAAG
FD965671       --> TCTCAACCCGGCAGCAACTTTATTGGTTCACAATCAGGTTCGAGCCGAAG
EX746310       --> TCTCAACCCGGCAGCAACTTTATTGGTTCACAATCAGGTTCGAGCCGAAG
EY945831       --> TCTCAACCCGGCAGCAACTTTATTGGTTCACAATCAGGTTCGAGCCGAAG
FD564246       --> TCTCAACCCGGCAGCAACTTTATTGGTTCACAATCAGGTTCGAGCCGAAG
FD955438       --> TCTCAACCCGGCAGCAACTTTATTGGTTCACAATCAGGTTCGAGCCGAAG
EX903545       --> TCTCAACCCGGCAGCAACTTTATTGATTCACAATCAGGTTCGAGCCGAAG
FD562182       --> TCTCAACCCGGCAGCAACTTTATTGGTTCACAATCAGGTTCGAGCCGAAG
FD940427       --> TCTCAACCCGGCAGCAACTTTATTGGTTCACAATCAGGTTCGAGCCGAAG
FD949835       --> TCTCAACCCGGCAGCAACTTTATTGGTTCACAATCAGGTTCGAGCCGAAG
EY898217       --> TCTCAACCCGGCAGCAACTTTATTGGTTCACAATCAGGTTCGAGCCGAAG
FD570694       --> TCTCAACCCGGCAGCAACTTTATTGGTTCACAATCAGGTT..........

               401    -    451
UN12664        --> TCGGGGTGGCTCCAATGCTGTGGGACTTTAAACTAGCTGCCTTCGCACAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD572555       --> TCGGGGTGGCTCCAATGCTGTGGGACTTTAAACTTGCTGCCTTCGCACAG
FD965671       --> TCGGGGTGGCTCCAATGCTGTGGGACTTTAAACTAGCTGCCTTCGCACAG
EX746310       --> TCGGGGTGGCTCCAATGCTGTGGGACTTTAAACTAGCTGCCTTCGCACAG
EY945831       --> TCGGGGTGGCTCCAATGCTGTGGGACTTTAAACTAGCTGCCTTCGCACAG
FD564246       --> TCGGGGTGGCTCCAATGCTGTGGGACTTTAAACTAGCTGCCTTCGCACAG
FD955438       --> TCGGGGTGGCTCCAATGCTGTGGGACTTTAAACTAGCTGCCTTCGCACAG
EX903545       --> TCGGGGTGGCTCCAATGCTGTGGGACTTTAAACTAGCTGCCTTCGCACAG
FD562182       --> TCGGGGTGGCTCCAATGCTGTGGGACTTTAAACTAGCTGCCTTCGCACAG
FD940427       --> TCGGGGTGGCTCCAATGCTGTGGGACTTTAAACTAGCTGCCTTCGCACAG
FD949835       --> TCGGGGTGGCTCCAATGCTGTGGGACTTTAAACTTGCTGCCTTCGCACAG
EY898217       --> TCGGGGTGGCTCCAATGCTGTGGGACTTTAAACTAGCTGCCTTCGCACAG
FD570694       --> ..................................................

               451    -    501
UN12664        --> AACTACGCTAACGTACGATCCAAAGACTGTGCCCTACAGCATTCGAACGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD572555       --> AACTACGCTAACGTACGATCCAAAGACTGTGCCCTACAGCATTCGAACGA
FD965671       --> AACTACGCTAACGTACGATCCAAAGACTGTGCCCTACAGCATTCGAACGA
EX746310       --> AACTACGCTAACGTACGATCCAAAGACTGTGCCCTACAGCATTCGAACGA
EY945831       --> AACTACGCTAACGTACGATCCAAAGACTGTGCCCTACAGCATTCGAACGA
FD564246       --> AACTACGCTAACGTACGATCCAAAGACTGTGCCCTACAGCATTCGAACGA
FD955438       --> AACTACGCTAACGTACGATCCAAAGACTGTGCCCTACAGCATTCGAACGA
EX903545       --> AACTACGCTAACGTACGATCCAAAGACTGTGCCCTACAGCATTCGAACGA
FD562182       --> AACTACGCTAACGTACGATCCAAAGACTGTGCCCTACAGCATTCGAACGA
FD940427       --> AACTACGCTAACGTACGATCCAAAGACTGTGCCCTACAGCATTCGAACGA
FD949835       --> AACTACGCTAACGTACGATCCAAAGACTGTGCCCTACAGCATTCGAACGA
EY898217       --> AACTACGCTAACGTACGATCCAAAGACTGTGCCCTACAGCATTCGAACGA
FD570694       --> ..................................................

               501    -    551
UN12664        --> CGAAATGTACGGCGAGAATATAGCTGCAGGGTGGCTCAAATCTAAGGAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD572555       --> CGAAATTTACGGCGAGAATATAGCTGCAGGGTGGCTCAAATCTAAGGAAT
FD965671       --> CGAAATGTACGGCGAGAATATAGCTGCAGGGTGGCTCAAATCTAAGGAAT
EX746310       --> CGAAATGTACGGCGAGGATATAGCTGCAGGGTGGCTCAAATCTAAGGAAT
EY945831       --> CGAAATGTACGGCGAGAATATAGCTGCAGGGTGGCTCAAATCTAAGGAAT
FD564246       --> CGAAATGTACGGCGAGAATATAGCTGCAGGGTGGCTCAAATCTAAAGAAT
FD955438       --> CGAAATGTACGGCGAGAATATAGCTGCAGGGTGGCTCAAATCTAAGGAAT
EX903545       --> CGAAATGTACGGCGAGAATATAGCTGCAGGGTGGCTCAAATCTAAGGAAT
FD562182       --> CGAAATGTACGGCGAGAATATAGCTGCAGGGTGGCTCAA-TCTAAGGAAT
FD940427       --> CGAAATGTACGGCGAGAATATAGCTGTAGGGTGGCTCAAATCTAAGGAAT
FD949835       --> CGAAATGTACGGCGAGAATATAGCTGCAGGGTGGCTCAAATCTAAGGAAT
EY898217       --> CGAAATGTACGGCGAGAATATAGCTGCAGGGTGGCTCAAATCTAAGGAAT
FD570694       --> ..................................................

               551    -    601
UN12664        --> CAATGAGCGGTCCGATCGCGGCTAAGTTGTGGTATGGCGAGAAGAAATTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD572555       --> CAATGAGCGGTCCGATCGCGGCTAAGTTGTGGTATGGCGAGAAGAAATTC
FD965671       --> CAATGAGCGGTCCGATCGCGGCTAAGTTGTGGTATGGCGAGAAGAAATTC
EX746310       --> CAATGAGCGGTCCGATCGCGGCTAAGTTGTGGTATGGCGAGAAGAAATTC
EY945831       --> CAATGAGCGGTCCGATCGCGGCTAAGTTGTGGTATGGCGAGAAGAAATTC
FD564246       --> CAATGAGCGGTCCGATCGCGGCTAAGTTGTGGTATGGCGAGAAG......
FD955438       --> CAATGAGCGGTCCGATCGCGGCTAAGTTGTGGTATGGCGAGAAGAAATTC
EX903545       --> CAATGAGCGGTCCGATCGCGGCTAAGTTGTGGTATGGCGAGAAGAAATTC
FD562182       --> CAATGAGCGGTCCGATCGCGGCTAAGTTGTGGTATGGCGAGAAGAAATTC
FD940427       --> CAATGAGCGGTCCGATCGCGGCTAAGTTGTGGTATGGCGAGAAGAAATTC
FD949835       --> CAATGAGCGGTCCGATTGCGGCTAAGTTGTGGTATGGCGAGAAGAAATTC
EY898217       --> CAATGAGCGGTCCGATCGCGGCTAAGTTGTGGTATGGCGAGAAGAAATTC
FD570694       --> ..................................................

               601    -    651
UN12664        --> TACAATTATCAAACCAACAAATGTAGTGGTGTGTGCGGGCATTATACTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD572555       --> TACAATTATCAAACCAACAAATGTAGTGGTGTGTGCGGGCATTATACTCA
FD965671       --> TACAATTATCAAACCAACAAATGTAGTGGTGTGTGCGGGCATTATACTCA
EX746310       --> TACAATTATCAAACCAACAAATGTAGTGGTGTGTGCGGGCATTATACTCA
EY945831       --> TACAATTATCAAACCAACAAATGTAGTGGTGTGTGCGGGCATTATACTCA
FD564246       --> ..................................................
FD955438       --> TACAATTATCAAACCAACAAATGTAGTGGTGTGTGCGGGCATTATACTCA
EX903545       --> TACAATTATCAAACCAACAAATGTAGTGGTGTGTGCGGGCATTATACTCA
FD562182       --> TACAATTATCAAACCAACAAATGTAGTGGTGTGTGCGGGCATTATACTCA
FD940427       --> TACAATTATCAAACCAACAAATGTAGTGGTGTGTGCGGGCATTATACTCA
FD949835       --> TACAATTATCAAACCAACAAATGTAGTGGTGTGTGCGGGCATTATACTCA
EY898217       --> TACAATTATCAAACCAACAAATGTAGTGGTGTGTGCGGGCATTATACTCA
FD570694       --> ..................................................

               651    -    701
UN12664        --> GATGGTGGCTAACCAATCGCACCGAGTTGGTTGTGGTCACGTCAGTGTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD572555       --> GATGGTGGCTAACCAATCGCACCGAGTTGGTTGTGGTCACGTCAGTGTCA
FD965671       --> GATGGTGGCTAACCAATCGCACCGAGTTGGTTGTGGTCACG.........
EX746310       --> GATGGTGGCTAACCAATCGCACCGAGTTGGTTGTGGTCACGTCAGTGTCA
EY945831       --> GATGGTGGCTAACCAATCGCACCGAGTTGGTTGTGGTCACGTCAGTGTCA
FD564246       --> ..................................................
FD955438       --> GATGGTGGCTAACCAATCGCACCGAGTTGGTTGTGGTCACGTCAGTGTCA
EX903545       --> GATGGTGGCTAACCA-TCGCACCGAGTTGGTTGTGGTCACGTCAGTGTCA
FD562182       --> GATGGTGGCTAACCAATCGCACCGAGTTGGTTGTGGTCACGTCAGTGTCA
FD940427       --> GATGGTGGCTAACCAATCGCACCGAGTTGGTTGTGGTCACGTCAGTGTCA
FD949835       --> GATGGTGGCTAACCAATCGCACCGAGTTGGTTGTGGTCACGTCAGTGTCA
EY898217       --> GATGGTGGCTAACCAATCGCACCGAGTTGGTTGTGGTCACGTCAGTGTCA
FD570694       --> ..................................................

               701    -    751
UN12664        --> TGCAAATACATATCTTTGGGTCGTATGTAACTATGCTCCTAGGCCGATGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD572555       --> TGCAAATACATATCTTTGGATCGTATGTAACTATGCTCCTAGGCCGATGG
FD965671       --> ..................................................
EX746310       --> TGCAA-TACATATCTTTGGGTCGTATGTAACTATG...............
EY945831       --> TGCAAATACATATCTTTGGGTCGTATGTAACTATGCTCCTAG-CCGAT..
FD564246       --> ..................................................
FD955438       --> TGCAAATACATATCTTTGGGTCGTATGTAACTATGCTCCTAGGCCGATGG
EX903545       --> TGCAAATACATATCTTTGGGTCGTATGTAACTATGCTCCTAGGCCGATGG
FD562182       --> TGCAAATACATATCTTTGGGTCGTATGTAACTATGCTCCTAGGC-GATGG
FD940427       --> TGCAAATACATAT.....................................
FD949835       --> TGCAAATACATATCTTTGGGTCGTATGTAACTATGCTCCTAGccg.....
EY898217       --> TGCAAATACATATCTTTGGGTCGTATGTAACTATGCTCCTAG-CCGATGG
FD570694       --> ..................................................

               751    -    801
UN12664        --> GTGATGAGACACACGTCCGTATTAATGAACTTTTGTTTTACTAAGACGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD572555       --> GTGATGAGACACACGTCCGTATTAATGAACTTTTGTTTTACTA-GACGAG
FD965671       --> ..................................................
EX746310       --> ..................................................
EY945831       --> ..................................................
FD564246       --> ..................................................
FD955438       --> GTGA..............................................
EX903545       --> GTGATGAGACACACGTCCGTAT-AATGAACTTTTGTTTTACTAAGACGAG
FD562182       --> GTGATGAGACACACGTCCGTATTAATGAACTTTTGTTTTACTAAGACGAG
FD940427       --> ..................................................
FD949835       --> ..................................................
EY898217       --> GTGATGAGACACACGTCCGTATTAAT........................
FD570694       --> ..................................................

               801    -    851
UN12664        --> TAGTTGTCTGA
                   ~~~~~~~~~~~
FD572555       --> TAGTTGTCTGA
FD965671       --> ...........
EX746310       --> ...........
EY945831       --> ...........
FD564246       --> ...........
FD955438       --> ...........
EX903545       --> TAGTTGTCTGA
FD562182       --> TAGTTGTCT..
FD940427       --> ...........
FD949835       --> ...........
EY898217       --> ...........
FD570694       --> ...........