1      -     51
UN13085        --> GGATCCATCTTACATATATATTACTCGTCATCAGGAATTCATGTTTTCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX776774       <-- .GATCCATCTTACATATATATTACTCGTCATCAGGAATTCATGTTTTCTC
EX774716       <-- ..........................GTCATCAGGAATTCATGTTTTCTC
EY911259       <-- ..................................................
EX899119       <-- ..................................................
EX770540       --> GGATCCATCTTACATATATATTACTCGTCATCAGGAATTCATGTTTTCTC
EY915404       --> GGATCCATCTTACATATATACTACTCGTCATCAGGAATTCATGTTTTCTC
EX894862       --> ...gggATCTTACATATATATTACTCGTCATCAGGAATTCATGTTTTCTC
EX761978       --> ......................ACTCGTCATCAGGAATTCATGTTTTCTC
EX772925       --> ..................................................

               51     -    101
UN13085        --> TCTGACAAGAGAACTCAGAGTAAGTAAGAATGGTACAGACGAAGAAGTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX776774       <-- TCTGACAAGAGAACTCAGAGTAAGTAAGAATGGTACAGACGAAGAAGTTC
EX774716       <-- TCTGACAAGAGAACTCAGAGTAAGTAAGAATGGTACAGACGAAGAAGTTC
EY911259       <-- ..................................................
EX899119       <-- ..................................................
EX770540       --> TCTGACAAGAGAACTCAGAGTAAGTAAGAATGGTACAGACGAAGAAGTTC
EY915404       --> TCTGACAAAAGAACTCAGAGTAAGTAAGAATGGTACAGACGAAGAAGTTC
EX894862       --> TCTGACAAGAGAACTCAGAGTAAGTAAGAATGGTACAGACGAAGAAGTTC
EX761978       --> TCTGACAAAAGAACTCAGAGTAAGTAAGAATGGTACAGACGAAGAAGTTC
EX772925       --> ..................................................

               101    -    151
UN13085        --> AGAGGTGTCAGGCAACGCCATTGGGGTTCTTGGGTCGCTGAGATTCGCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX776774       <-- AGAGGTGTCAGGCAACGCCATTGGGGTTCTTGGGTCGCTGAGATTCGCCA
EX774716       <-- AGAGGTGTCAGGCAACGCCATTGGGGTTCTTGGGTCGCTGAGATTCGCCA
EY911259       <-- ..................................................
EX899119       <-- ..................................................
EX770540       --> AGAGGTGTCAGGCAACGCCATTGGGGTTCTTGGGTCGCTGAGATTCGCCA
EY915404       --> AGAGGTGTCAGGCAACGCCATTGGGGTTCTTGGGTCGCTGAGATTCGTCA
EX894862       --> AGAGGTGTCAGGCAACGCCATTGGGGTTCTTGGGTCGCTGAGATTCGCCA
EX761978       --> AGAGGTGTCAGGCAACGCCATTGGGGTTCTTGGGTCGCTGAGATTCGTCA
EX772925       --> .......................GGGTTCTTGGGTCGCTGAGATTCGCCA

               151    -    201
UN13085        --> TCCTCTCTTGAAACGGAGAATTTGGCTTGGGACGTTTGAGACGGCAGAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX776774       <-- TCCTCTCTTGAAACGGAGAATTTGGCTTGGGACGTTTGAGACGGCAGAGG
EX774716       <-- TCCTCTCTTGAAACGGAGAATTTGGCTTGGGACGTTTGAGACGGCAGAGG
EY911259       <-- ...........AACGGAGAATTTGGCTTGGGACGTTTGAGACGGCAGAGG
EX899119       <-- ..................................................
EX770540       --> TCCTCTCTTGAAACGGAGAATTTGGCTTGGGACGTTTGAGACGGCAGAGG
EY915404       --> TCCTCTCTTGAAACGGAGAATTTGGCTTGGGACGTTTGAGACGGCAGAGG
EX894862       --> TCCTCTCTTGAAACGGAGAATTTGGCTTGGGACGTTTGAGACGGCAGAGG
EX761978       --> TCCTCTCTTGAAACGGAGAATTTGGCTTGGGACGTTTGAGACGGCAGAGG
EX772925       --> TCCTCTCTTGAAACGGAGAATTTGGCTTGGGACGTTTGAGACGGCAGAGG

               201    -    251
UN13085        --> AGGCAGCAAGAGCCTACGACGAGGCGGCTGTTTTAATGAGCGGCCGCAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX776774       <-- AGGCAGCAAGAGCCTACGACGAGGCGGCTGTTTTAATGAGCGGCCGCAAC  Raphanus raphanistrum subsp. landra
EX774716       <-- AGGCAGCAAGAGCCTACGACGAGGCGGCTGTTTTAATGAGCGGCCGCAAC  Raphanus raphanistrum subsp. landra
EY911259       <-- AGGCAGCAAGAGCCTACGACGAGGCAGCCGTTTTAATGAGCGGCCGCAAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX899119       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX770540       --> AGGCAGCAAGAGCCTACGACGAGGCGGCTGTTTTAATGAGCGGCCGCAAC  Raphanus raphanistrum subsp. landra
EY915404       --> AGGCAGCAAGAGCCTACGACGAGGCAGCCGTTTTAATGAGCGGCCGCAAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX894862       --> AGGCAGCAAGAGCCTACGACGAGGCGGCTGTTTTAATGAGCGGCCGCAAC  Raphanus sativus cv Early Scarlet Globe
EX761978       --> AGGCAGCAAGAGCCTACGACGAGGCAGCCGTTTTAATGAGCGGCCGCAAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX772925       --> AGGCAGCAAGAGCCTACGACGAGGCGGCTGTTTTAATGAGCGGCCGCAAC  Raphanus raphanistrum subsp. landra

               251    -    301
UN13085        --> GCCAAGACTAACTTCCCCCTCAACAACAACAACA---CAGGAGACACATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX776774       <-- GCCAAGACTAACTTCCCCCTCAACAACAACAACAACACAGGAGACACATC
EX774716       <-- GCCAAGACTAACTTCCCCCTCAACAACAACAACAACACAGGAGACACATC
EY911259       <-- GCCAAGACTAACTTCCCCCTCAACAACAACAACA---CAGGAGACACATC
EX899119       <-- .............ccttcaaCAACAACAACAACA---CAGGAGACACATC
EX770540       --> GCCAAGACTAACTTCCCCCTCAACAACAACAACAACACAGGAGACACATC
EY915404       --> GCCAAGACTAACTTCCCCCTCAACAACAACAACA---CAGGAGACACATC
EX894862       --> GCCAAGACTAACTTCCCCCTCAACAACAACAACAACACAGGAGACACATC
EX761978       --> GCCAAGACTAACTTCCCCCTCAACAACAACAACAACACAGGAGACACATC
EX772925       --> GCCAAGACTAACTTCCCCCTCAACAACAACAACAACACAGGAGACACATC

               301    -    351
UN13085        --> GGAGGGCAAAACAGATATTTCATCCTCCTCTTCATCACTTTCTTCTATCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX776774       <-- GGAGGGCAAAACAGATATTTCATCCTCCTCTTCATCACTTTCTTCTATCC
EX774716       <-- GGAGGGCAAAACAGATATTTCATCCTCCTCTTCATCACTTTCTTCTATCC
EY911259       <-- GGAGGGCAAAACAGATATTTCATCCTCCTCTTCATCACTCTCTTCTATCC
EX899119       <-- GGAGGGCAAAACAGATATTTCATCCTCCTCTTCATCACTTTCTTCTATCC
EX770540       --> GGAGGGCAAAACAGATATTTCATCCTCCTCTTCATCACTTTCTTCTATCC
EY915404       --> GGAGGGCAAAACAGATATTTCATCCTCCTCTTCATCACTCTCTTCTATCC
EX894862       --> GGAGGGCAAAACAGATATTTCATCCTCCTCTTCATCACTTTCTTCTATCC
EX761978       --> GGAGGGCAAAACAGATATTTCATCCTCCTCTTCATCACTCTCTTCTATCC
EX772925       --> GGAGGGCAAAACAGATATTTCATCCTCCTCTTCATCACTTTCTTCTATCC

               351    -    401
UN13085        --> TCAGCGCCAAACTGAGGAAATGCTGCAAGTCTCCTTCGCCTT-CCCTCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX776774       <-- TCAGCGCCAAACTGAGGAAATGCTGCAAGTCTCCTTCGCCTT-CCCTCAC
EX774716       <-- TCAGCGCCAAACTGAGGAAATGCTGCAAGTCTCCTTCGCCTT-CCCTCAC
EY911259       <-- TCAGCGCCAAACTGAGGAAATGCTGCAAGTCTCCTTCGCCTT-CCCTCAC
EX899119       <-- TCAGCGCCAAACTGAGGAAATGCTGCAAGTCTCCTTCGCCTT-CCCTCAC
EX770540       --> TCAGCGCCAAACTGAGGAAATGCTGCAAGTCTCCTTCGCCTT-CCCTCAC
EY915404       --> TCAGCGCCAAACTGAGGAAATGCTGCAAGTCTCCTTCGCCTT-CCCTCAC
EX894862       --> TCAGCGCCAAACTGAGGAAATGCTGCAAGTCTCCTTCGCCTT-CCCTCAC
EX761978       --> TCAGCGCCAAACTGAGGAAATGCTGCAAGTCTCCTTCGCCTT-CCCTCAC
EX772925       --> TCAGCGCCAAACTGAGGAAATGCTGCAAGTCTCCTTCGCCTTTCCCTCAC

               401    -    451
UN13085        --> CTGCCTCCGTCTTGACACAGCCAGCTCCCACATCGGCGTCTGGCAGAA-G
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX776774       <-- CTGCCTCCGTCTTGACACAGCCAGCTCCCACATCGGCGTCTGGCAGAA-G
EX774716       <-- CTGCCTCCGTCTTGACACAGCCAGCTCCCACATCGGCGTCTGGCAGAA-G
EY911259       <-- CTGCCTCCGTCTTGACACGGCCAGCTCCCACATCGGCGTCTGGCAGAA-G
EX899119       <-- CTGCCTCCGTCTTGACACAGCCAGCTCCCACATCGGCGTCTGGCAGAA-G
EX770540       --> CTGCCTCCGTCTTGACACAGCCAGCTCCCACATCGGCGTCTGGCAGAA-G
EY915404       --> CTGCCTCCGTCTTGACACGGCCAGCTCCCACATCGGCGTCTGGCAGAA-G
EX894862       --> CTGCCTCCGTCTTGACACAGCCAGCTCCCACATCGGCGTCTGGCAGAA-G
EX761978       --> CTGCCTCCGTCTTGACACGGCCAGCTCCCACATCGGCGTCTGGCAGAA-G
EX772925       --> CTGCCTCCGTCTTGACACAGCCAGCTCCCACATCGGCGTCTGGCAGAAAG

               451    -    501
UN13085        --> CGAGCCGGTTCCAAGTCCGACTCCAGTTGGGTCATGACGGTGGAGCTAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX776774       <-- CGAGCCGGTTCCAAGTCCGACTCCAGTTGGGTCATGACGGTGGAGCTAGG
EX774716       <-- CGAGCCGGTTCCAAGTCCGACTCCAGTTGGGTCATGACGGTGGAGCTAGG
EY911259       <-- CGCGCCGGTTCCAAGTCCGACTCCAGTTGGGTCATGACGGTGGAGCTCGG
EX899119       <-- CGAGCCGGTTCCAAGTCCGACTCCAGTTGGGTCATGACGGTGGAGCTAGG
EX770540       --> CGAGCCGGTTCCAAGTCCGACTCCAGTTGGGTCATGACGGTGGAGCTAGG
EY915404       --> CGCGCCGGTTCCAAGTCCGACTCCAGTTGGGTCATGACGGTGGAGCTCGG
EX894862       --> CGAGCCGGTTCCAAGTCCGACTCCAGTTGGGTCATGACGGTGGAGCTAGG
EX761978       --> CGCCCCGGTTCCAAGTCCGACTCCAGTTGGGTCATGACGGTGGAGCTCGG
EX772925       --> CGAGCCGGTTCCAAGTCCGACTCCAGTTGGGTCATGACGGTGGAGCTAGG

               501    -    551
UN13085        --> TCCCGCTGGCTCCTCCCAAGAGCCTACTAAAAATGCTTCGCAAGACGATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX776774       <-- TCCCGCTGGCTCCTCCCAAGAGCCTACTAAAAATGCTTCGCAAGACGATG
EX774716       <-- TCCCGCTGGCTCCTCCCAAGAGCCTACTAAAAATGCTTCGCAAGACGATG
EY911259       <-- TCCCGCTGGTTCCTCCCAAGAGCCTACTAAAAATGCTTCACAAGATGATG
EX899119       <-- TCCCGCTGGCTCCTCCCAAGAGCCTACTAAAAATGCTTCGCAAGACGATG
EX770540       --> TCCCGCTGGCTCCTCCCAAGAGCCTACTAAAAATGCTTCGCAAGACGATG
EY915404       --> TCCCGCTGGTTCCTCCCAAGAGCCTACTAAAAATGCTTCACAAGATGATG
EX894862       --> TCCCGCTGGCTCCTCCCAAGAGCCTACTAAAAATGCTTCGCAAGACGATG
EX761978       --> TCCCGCTGGTTCCTCCCAAGAGCCTACTAAAAATGCTTCACAAGATGATG
EX772925       --> TCCCGCTGGCTCCTCCCAAGAGCCTACTAAAAATGCTTCGCAAGACGATG

               551    -    601
UN13085        --> TTGGTCCGGCCACTGAAGTTGGCGGCGGCGGAGGAGGAGAAGAAGGAGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX776774       <-- TTGGTCCGGCCACTGAATTTGGCGGCGGCGGAGGAGGAGAAGAAGGAGCA  Raphanus raphanistrum subsp. landra
EX774716       <-- TTGGTCCGGCCACTGAATTTGGCGGCGGCGGAGGAGGAGAAGAAGGAGCA  Raphanus raphanistrum subsp. landra
EY911259       <-- TTGGTCCGGCCACTGAAGTTGGCGGCGGCGGAGGAGGAGAAGAAGGAGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX899119       <-- TTGGTCCGGCCACTGAAGTTGGCGGCGGCGGAGGAGGTGAAGAAGGAGCA  Raphanus sativus cv Early Scarlet Globe
EX770540       --> TTGGTCCGGCCACTGAATTTGGCGGCGGCGGAGGAGGAGAAGAAGGAGCA  Raphanus raphanistrum subsp. landra
EY915404       --> TTGGTCCGGCCACTGAAGTTGGCGGCGGCGGAGGAGGAGAAGAAGGAGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX894862       --> TTGGTCCGGCCACTGAAGTTGGCGGCGGCGGAGGAGGTGAAGAAGGAGCA  Raphanus sativus cv Early Scarlet Globe
EX761978       --> TTGGTCCGGCCACTGAAGTTGGCGGCGGCGGAGGAGGAGAAGAAGGAGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX772925       --> TTGGTCCGGCCACTGAATTTGGCGGCGGCGGAGGAGGAGAAGAAGGAGCA  Raphanus raphanistrum subsp. landra

               601    -    651
UN13085        --> ATGGACGAAGAAGAGAAAGCTGCTTTGCAAATGATAGAGGAGCTTCTCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX776774       <-- ATGGACGAAGAAGAGAAAGCTGCTTTGCAAATGATAGAGGAACTTCTCAA  Raphanus raphanistrum subsp. landra
EX774716       <-- ATGGACGAAGAAGAGAAAGCTGCTTTGCAAATGATAGAGGAACTTCTCAA  Raphanus raphanistrum subsp. landra
EY911259       <-- ATGGACGAAGAAGAGAAAGCTGCTTTGCAAATGATAGAGGAGCTTCTCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX899119       <-- ATGGACGAAGAAGAGAAAGCTGCTTTGCAAATGATAGAGGAGCTTCTCAA  Raphanus sativus cv Early Scarlet Globe
EX770540       --> ATGGACGAAGAAGAGAAAGCTGCTTTGCAA-TGATAGAGGAACTTCTCAA  Raphanus raphanistrum subsp. landra
EY915404       --> ATGGACGAAGAAGAGAAAGCTGCTTTGCAAATGATAGAGGAGCTTCTCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX894862       --> ATGGACGAAGAAGAGAAAGCTGCTTTGCAAATGATAGAGGAGCTTCTCAA  Raphanus sativus cv Early Scarlet Globe
EX761978       --> ATGGACGAAGAAGAGAAAGCTGCTTTGCAAATGATAGAGGAGCTTCTCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX772925       --> ATGGACG...........................................  Raphanus raphanistrum subsp. landra

               651    -    701
UN13085        --> TACAAACTAAATATTATTTGCCTATATATACCTATTTTTATTGCTGATTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX776774       <-- TACAAACTAAATATTATTTGCCTATATATACCTATTTTTATTGCTGATTT  Raphanus raphanistrum subsp. landra
EX774716       <-- TACAAACTAAATATTATTTGCCTATATATACCTATTTTTATTGCTGATTT  Raphanus raphanistrum subsp. landra
EY911259       <-- TACAAACTAAATATTATTTGCTTATATATACCTATTTTTATTGCTGATTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX899119       <-- TACAAACTAAATATTATTTGCCTATATATACCTATTTTTATTGCTGATTT  Raphanus sativus cv Early Scarlet Globe
EX770540       --> TACAAACTAAATATTATTTGCCTATATATACCTATTTTTATTGCTGATTT  Raphanus raphanistrum subsp. landra
EY915404       --> TACAAACTAAATATTATTTGCTTATATATACCTATTTTTATTGCTGATTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX894862       --> TACAAACTAAATATTATTTGCCTATATATACCTATTTTTATTGCTGATTT  Raphanus sativus cv Early Scarlet Globe
EX761978       --> TACAAACTAAATATTATTTGCTTATATATACCTATTTTTATTGCTGATTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX772925       --> ..................................................  Raphanus raphanistrum subsp. landra

               701    -    751
UN13085        --> ACCGCCATAATTATTAATTATACCCATATATATGCCATGTATCGTGTTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX776774       <-- ACCGCCATAATTATTAATTATACCCATATATATGCCATGTATCGTGTTTA  Raphanus raphanistrum subsp. landra
EX774716       <-- ACCGCCATAATTATTAATTATACCCATATATATGCCATGTATCGTGTTTA  Raphanus raphanistrum subsp. landra
EY911259       <-- ACAGCCATAATTATTAATTATACCCATATATATGCCATGTATCGTGTTTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX899119       <-- ACCGCCATAATTATTAATTATACCCATATATATGCCATGTATCGTGTTTA  Raphanus sativus cv Early Scarlet Globe
EX770540       --> ACCGCCATAATTATTAATTATACCCATATATATGCCATGTATCGTGTT-A  Raphanus raphanistrum subsp. landra
EY915404       --> ACAGCCATAATTATTAATTATACCCATATATATGCCATGTATCGTGTTTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX894862       --> ACCGCCATAATTATTAATTATACCCATATATATGCCATGTATCGTGTTTA  Raphanus sativus cv Early Scarlet Globe
EX761978       --> ACAGCCATAATTATTAATTATACCCATATATATGCCATGTATCGTGTTTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX772925       --> ..................................................  Raphanus raphanistrum subsp. landra

               751    -    801
UN13085        --> TATTTATATGTGATAGTTATAAGTTGTTTTATATTTCGTTTTATGTCCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX776774       <-- TATTTATATGTGATAGTTATAAGTTGTTTTATATTTCGTTTTATGTCCAA
EX774716       <-- TATTTATATGTGATAGTTATAAGTTGTTTTATATTTCGTTTTATGTCCAA
EY911259       <-- TATTTATATGTGATAGTTATAAGTTGTTTTATATTTCGTTTTATGTCCAA
EX899119       <-- TATTTATATGTGATAGTTATAAGTTGTTTTATATTTCGTTTTATGTCCAA
EX770540       --> TATTTATATGTGATAGTTATAAGTgttt......................
EY915404       --> TATTTATATGTGATAGTTATAAGTTGTTTTATATTTCGTTTTATGTC...
EX894862       --> TATTTATATGTGATAGTTATAAGTTGTTTTATATTT..............
EX761978       --> TATTT-TATGTGATAGTTATAAGTTGTTTT....................
EX772925       --> ..................................................

               801    -    851
UN13085        --> -TAAAGTATTAGTATTTGTAACTACAATCCAGAAGTGAACTTTTTCTTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX776774       <-- -TAAAGTATTAGTATTTGT...............................
EX774716       <-- -TAAAGTATTAGTATTTGT...............................
EY911259       <-- -TAAAGTATTAGTATTTGTAACTACAATCCAGAAGTGAACTTTTTCTTTT
EX899119       <-- ATAAAGTATTAGTATTTGTAACc...........................
EX770540       --> ..................................................
EY915404       --> ..................................................
EX894862       --> ..................................................
EX761978       --> ..................................................
EX772925       --> ..................................................

               851    -    901
UN13085        --> GTGAT
                   ~~~~~
EX776774       <-- .....
EX774716       <-- .....
EY911259       <-- GTGAT
EX899119       <-- .....
EX770540       --> .....
EY915404       --> .....
EX894862       --> .....
EX761978       --> .....
EX772925       --> .....