RadishBase

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Alignment for radish unigene UN13090

               1      -     51
UN13090        --> GAATAATAATGTTCTGAGTAGCATAAATTTATAAAATGTTACAATGAAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD563983       <-- ........................................ACAATGAAAT
FY452714       <-- ..................................................
FY434598       <-- ..................................................
FY430286       <-- ..................................................
FY432096       <-- ..................................................
FY438105       <-- ..................................................
FY451133       <-- ..................................................
FY429131       <-- ..................................................
FY448309       <-- ..................................................
EW714317       <-- ..................................................
FD987710       <-- ..................................................
FD979730       <-- ..................................................
FD543761       <-- ..................................................
EX896100       <-- ..................................................
FD969986       <-- ..................................................
EY919303       --> GAATAATAATGTTCTGAGTAGCATAAATTTATAAAATGTTACAATGAAGT
EW719067       --> .....................................GTTACAATGAAAT
FD983705       --> ............................................cGAAGT
FD968836       --> ..................................................
FD975724       --> ..................................................
FY431820       --> ..................................................

               51     -    101
UN13090        --> AAGAAAATATTATTATTCAAGAAGGTAACAAACTGTATAACATCTCCTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD563983       <-- AAGAAAATATTATTATTCAAGAAGGTAACAAACTGTATAACATCTCCTCC
FY452714       <-- ..................................................
FY434598       <-- ..................................................
FY430286       <-- ..................................................
FY432096       <-- ..................................................
FY438105       <-- ..................................................
FY451133       <-- ..................................................
FY429131       <-- ..................................................
FY448309       <-- ..................................................
EW714317       <-- ..................................................
FD987710       <-- ..................................................
FD979730       <-- ..................................................
FD543761       <-- ..................................................
EX896100       <-- ..................................................
FD969986       <-- ..................................................
EY919303       --> AAGAAAATATTATTATTCAAGAAGGTGACAAACTGTATAACATCTCCTCC
EW719067       --> AAGAAAATATTATTATTCAAGAAGGTAACAAACTGTATAACATCTCCTCC
FD983705       --> AAGAAAATATTATTATTCAAGAAGGTAACAAACTGTATAACATCTCCTCC
FD968836       --> ...........................ACAAACTGTATAACATCTCCTCC
FD975724       --> ...........................gtataacatcttctcctccccaa
FY431820       --> ..................................................

               101    -    151
UN13090        --> AGAACAGAAACTCACCGGAATCTAAAAAGACTCCGGCCAAATAAATTACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD563983       <-- AGAACAGAAACTCACCGGAATCTAAAAAGGCTCCGGCCAAATAAATTACA
FY452714       <-- ..................................................
FY434598       <-- ..................................................
FY430286       <-- ..................................................
FY432096       <-- ..................................................
FY438105       <-- ..................................................
FY451133       <-- ..................................................
FY429131       <-- ..................................................
FY448309       <-- ..................................................
EW714317       <-- ..................................................
FD987710       <-- ..................................................
FD979730       <-- ..................................................
FD543761       <-- ..................................................
EX896100       <-- ..................................................
FD969986       <-- ..................................................
EY919303       --> AGAACAGAAACTCACCGGAATCTAAAAAGACTCCGGCCAAATAAATTACA
EW719067       --> AGAACAGAAACTCACCGGAATCTAAAAAGACTCCGGCCAAATAAATTACA
FD983705       --> AGAACAGAAACTCACCGGAATCTAAAAAGACTCCGGCCAAATAAATTACA
FD968836       --> AGAACAGAAACTCACCGGAATCTAAAAAGACTCCGGCCAAATAAATTACA
FD975724       --> gtAACAGAAACTCACCGGAATCTAAAAAGACTCCGGCCAAATAAATTACA
FY431820       --> ..................................................

               151    -    201
UN13090        --> GTATCTTGAGTGCCACCTTAATATTTCCTTCTTTTATTTTCAAAATATAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD563983       <-- GTATCTTGAGTGCCACCTTAATATTTCCTTCTTTTATTTTCAAAATATAT
FY452714       <-- ..................................................
FY434598       <-- ..................................................
FY430286       <-- ..................................................
FY432096       <-- ..................................................
FY438105       <-- ..................................................
FY451133       <-- ..................................................
FY429131       <-- ..................................................
FY448309       <-- ..................................................
EW714317       <-- ..................................................
FD987710       <-- ..................................................
FD979730       <-- ..................................................
FD543761       <-- ..................................................
EX896100       <-- ..................................................
FD969986       <-- ..................................................
EY919303       --> GTATCTTGAGTGCCACCTTAATATTTCCTTCTTTTATTTTCAAAATATAT
EW719067       --> GTATCTTGAGTGCCACCTTAATATTTCCTTCTTTTATTTTCAAAATATAT
FD983705       --> GTATCTTGAGTGCCACCTTAATATTTCCTTCTTTTATTTTCAAAATATAT
FD968836       --> GTATCTTGAGTGCCACCTTAATATTTCCTTCTTTTATTCTCAAAATATAT
FD975724       --> ATATCTTGAGAGCCACCTTAATATTTCCTTCTTTTATTTTCAAAATATAT
FY431820       --> ..................................................

               201    -    251
UN13090        --> TACGAAAAATAAAAAATGAAATATATAGAACACAAACAAACATAACAGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD563983       <-- TACGAAAAATAAAAAATGAAATATATAGAACACAAACAAACATAACAGAT
FY452714       <-- ..................................................
FY434598       <-- ..................................................
FY430286       <-- ..................................................
FY432096       <-- ..................................................
FY438105       <-- ..................................................
FY451133       <-- ..................................................
FY429131       <-- ..................................................
FY448309       <-- ..................................................
EW714317       <-- ..................................................
FD987710       <-- ..................................................
FD979730       <-- ..................................................
FD543761       <-- ..................................................
EX896100       <-- ..................................................
FD969986       <-- ..................................................
EY919303       --> TACGAAAAATAAAAAATGAAATATATAGAACACAAACAAACATAACAGAT
EW719067       --> TACGAAAAATAAAAAATGAAATATATAGAACACAAACAAACATAACAGAT
FD983705       --> TACGAAAAATAAAAAATGAAATATATAGAACACAAACAAACATAACAGAT
FD968836       --> TACGAAAAATAAAAAATGAAATATATAGAACACAAACAAACATAACAGAT
FD975724       --> TACGAAAAATAAAAAATGAAATATATAGAACACAAACAAACATAACAGAT
FY431820       --> ..................................................

               251    -    301
UN13090        --> GGAGACTGAGATGAAGAAGAAGCATCAAACCAATCTCTCATCAATTTCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD563983       <-- GGAGACTGAGATGAAGAAGAAGCATCAAACCAATCTCTCATCAATTTCAA
FY452714       <-- ..................................................
FY434598       <-- ..................................................
FY430286       <-- ..................................................
FY432096       <-- ..................................................
FY438105       <-- ..................................................
FY451133       <-- ..................................................
FY429131       <-- ..................................................
FY448309       <-- ..................................................
EW714317       <-- ..................................................
FD987710       <-- ..................................................
FD979730       <-- ..................................................
FD543761       <-- ..................................................
EX896100       <-- ..................................................
FD969986       <-- ..................................................
EY919303       --> GGAGACTGAGATGAAGAAGAAGCATCAAACCAATCTCTCATCAATTTCAA
EW719067       --> GGAGACTGAGATGAAGAAGAAGCATCAAACCAATCTCTCATCAATTTCAA
FD983705       --> GGAGACTGAGATGAAGAAGAAGCATCAAACCAATCTCTCATCAATTTCAA
FD968836       --> GGAGACTGAGATGAAGAAGAAGCATCAAACCAATCTCTCATCAATTTCAA
FD975724       --> GGAGACTGAGATGGAGAAGAAGCATCAAACCAATCTCTCATCAATTTCAA
FY431820       --> ..................................................

               301    -    351
UN13090        --> GCAAGGTTGATCGTGAAGGAGACATAAGGATGTGTCTCTGAGTCACCTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD563983       <-- GCAAGGTTGATCGTGAAGGAGACATAAGGATGTGTCTCTGAGTCACCTGC
FY452714       <-- ..................................................
FY434598       <-- ..................................................
FY430286       <-- ..................................................
FY432096       <-- ..................................................
FY438105       <-- ..................................................
FY451133       <-- ..................................................
FY429131       <-- ..................................................
FY448309       <-- ..................................................
EW714317       <-- ..................................................
FD987710       <-- ..................................................
FD979730       <-- ..................................................
FD543761       <-- ..................................................
EX896100       <-- ..................................................
FD969986       <-- ..................................................
EY919303       --> GCAAGGTTGATCGTGAAGGAGACATAAGGATGTGTCTCTGAGTCACCTGC
EW719067       --> GCAAGGTTGATCGTGAAGGAGACATAAGGATGTGTCTCTGAGTCACCTGC
FD983705       --> GCAAGGTTGATCGTGAAGGAGACATAAGGATGTGTCTCTGAGTCACCTGC
FD968836       --> GCAAGGTTGATCGTGAAGGAGACATAAGGATGTGTCTCTGAGTCACCTGC
FD975724       --> GCAAGGGTGATCGTGAAGGAGACATAAGGATGTGTCTCTGAATCACCTGC
FY431820       --> ..................................................

               351    -    401
UN13090        --> TAAACCAGCCATGGCAGCTCCTCCATCCTCCTCGCTTTTCCAGTATAAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD563983       <-- TAAACCAGCCATGGCAGCTCCTCCATCCTCCTCGCTTTTCCAGTATAAAC
FY452714       <-- ..................................................
FY434598       <-- ..................................................
FY430286       <-- ..................................................
FY432096       <-- ..................................................
FY438105       <-- ..................................................
FY451133       <-- ..................................................
FY429131       <-- ..................................................
FY448309       <-- ..................................................
EW714317       <-- ..................................................
FD987710       <-- ..................................................
FD979730       <-- ..................................................
FD543761       <-- ..................................................
EX896100       <-- ..................................................
FD969986       <-- ..................................................
EY919303       --> TAAACCAGCCATGGCTGCTCCTCCATCCTCCTCGCTTTTCCAGTATAAAC
EW719067       --> TAAACCAGCCATGGCAGCTCCTCCATCCTCCTCGCTTTTCCAGTATAAAC
FD983705       --> TAAACCAGCCATGGCTGCTCCTCCATCCTCCTCGCTTTTCCAGTATAAAC
FD968836       --> TAAACCAGCCATGGCAGCTCCTCCATCCTCCTCGCTTTTCCAGTATAAAC
FD975724       --> TAAACCAGCCATGGCAGCTCCTCCATCCTCCTCGCTTTTCCAGTATAAAC
FY431820       --> ..................................................

               401    -    451
UN13090        --> TGTTGGTAGAATCACACAAGCGTTCAAGAATGGAGCGCACTTTCTTTTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD563983       <-- TGTTGGTAGAATCACACAAGCGTTCAAGAAGGGAGCGCACTTTCTTTTCG  Raphanus sativus var. oleiformis
FY452714       <-- ..................................................  Raphanus sativus cv GSK3-1
FY434598       <-- ..................................................  Raphanus sativus cv GSK3-1
FY430286       <-- ..................................................  Raphanus sativus cv GSK3-1
FY432096       <-- ..................................................  Raphanus sativus cv GSK3-1
FY438105       <-- ..................................................  Raphanus sativus cv GSK3-1
FY451133       <-- ..................................................  Raphanus sativus cv GSK3-1
FY429131       <-- ..................................................  Raphanus sativus cv GSK3-1
FY448309       <-- ..................................................  Raphanus sativus cv GSK3-1
EW714317       <-- ..................................................  Raphanus sativus var. oleiformis
FD987710       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD979730       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD543761       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX896100       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD969986       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY919303       --> TGTTGGTAGAATCACACAAGCGTT-AAGAATGGAGCGTACTTTCTTTTCA  Raphanus raphanistrum subsp. landra
EW719067       --> TGTTGGTAGAATCACACAAGCGTTCAAGAAGGGAGCGCACTTTCTTTTCA  Raphanus sativus var. oleiformis
FD983705       --> TGTTGGTAGAATCACACAAGCGTTCAAGAATGGAGCGTACTTTCTTTTCA  Raphanus raphanistrum subsp. landra
FD968836       --> TGTTGGTAGAATCACACAAGCGTTCAAGAAGGGAGCGCACTTTCTTTTCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD975724       --> TGTTGGTAGAATCACACAAGCGTTCAAGAATGGAGCGCACTTTCTTTTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FY431820       --> ..................................................  Raphanus sativus cv GSK3-1

               451    -    501
UN13090        --> CTCTTCACAGCCGGAGATAAGACGCATGCCAAGAACGCAGGAGGTAAACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD563983       <-- CTCTTCACAGCCGGAGATAAGACGCATGCCAAGAACGCAGGAGGTAAACC  Raphanus sativus var. oleiformis
FY452714       <-- ..................................................  Raphanus sativus cv GSK3-1
FY434598       <-- ..................................................  Raphanus sativus cv GSK3-1
FY430286       <-- ..................................................  Raphanus sativus cv GSK3-1
FY432096       <-- ..................................................  Raphanus sativus cv GSK3-1
FY438105       <-- ..................................................  Raphanus sativus cv GSK3-1
FY451133       <-- ..................................................  Raphanus sativus cv GSK3-1
FY429131       <-- ..................................................  Raphanus sativus cv GSK3-1
FY448309       <-- ..................................................  Raphanus sativus cv GSK3-1
EW714317       <-- ..................................................  Raphanus sativus var. oleiformis
FD987710       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD979730       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD543761       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX896100       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD969986       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY919303       --> CTCTTCACAGCCGGAGACAAGACGCAAGCCAAGAACGCAGGAGGTAAACC  Raphanus raphanistrum subsp. landra
EW719067       --> CTCTTCACAGCCGGAGATAAGACGCATGCCAAGAACGCAGGAGGTAAACC  Raphanus sativus var. oleiformis
FD983705       --> CTCTTCACAGTCGGAGACAAGACGCAAGCCAAGAACGCAGGAGGTAAACC  Raphanus raphanistrum subsp. landra
FD968836       --> CTCTTCACAGCCGGAGATAAGACGCATGCCAAGAACGCA...........  Raphanus raphanistrum subsp. raphanistrum (MS)
FD975724       --> CTCTTCACAGCCGGAGATAAGACGGAAGCCAAGAACGCAGGAGGTAAACC  Raphanus raphanistrum subsp. raphanistrum (NY)
FY431820       --> ..................................................  Raphanus sativus cv GSK3-1

               501    -    551
UN13090        --> ATATCTCATAATGCTCTCAGCGAATATGCGCACAGCACAGAAATGCATCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD563983       <-- ATATCTCATAATGCTCTCAGCGAATATGCGC--AGCACAGAAATGCATCC
FY452714       <-- .................................AGCACAGAAATGCATCC
FY434598       <-- ..................................................
FY430286       <-- ..................................................
FY432096       <-- ..................................................
FY438105       <-- ..................................................
FY451133       <-- ..................................................
FY429131       <-- ..................................................
FY448309       <-- ..................................................
EW714317       <-- ..................................................
FD987710       <-- ..................................................
FD979730       <-- ..................................................
FD543761       <-- ..................................................
EX896100       <-- ..................................................
FD969986       <-- ..................................................
EY919303       --> ATATCTCATAATACTCTCAGCGAATATGCGCACAGCACAGAAATGCATCC
EW719067       --> ATATCTCATAATGCTCTCAGCGAATATGCGCGCAGCACAGAAATGCATCC
FD983705       --> ATATCTCATAATACTCTCAGCGAATATGCGCACAGCACAGAAATGCATCC
FD968836       --> ..................................................
FD975724       --> ATATCTCATAATGCTCTCAGCGAATATGCGCACAGCACAGAAATGCATCC
FY431820       --> ..................................................

               551    -    601
UN13090        --> AGGAGCTGAAAACCTCTCCATAGCTGGTGTAGCACCATTGCAAAA-GAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD563983       <-- AGGAGCTGAAAACCTCTCCATAGCTGGTGTAGCACCATTGCAAAA-GAGA
FY452714       <-- AGGAGCTGAAAACCTCTCCATAGCTGGTGTAGCACCAT-GCAAAAAGAGA
FY434598       <-- ....................TAGCTGGTGTAGCACCATTGCAAAA-GAGA
FY430286       <-- .............................TAGCACCATTGCAAAA-GAGA
FY432096       <-- ..........................................AAA-GAGA
FY438105       <-- ..................................................
FY451133       <-- ..................................................
FY429131       <-- ..................................................
FY448309       <-- ..................................................
EW714317       <-- ..................................................
FD987710       <-- ..................................................
FD979730       <-- ..................................................
FD543761       <-- ..................................................
EX896100       <-- ..................................................
FD969986       <-- ..................................................
EY919303       --> AGGAGCTGAAAACCTCTCCATAGCTGGTGTAGCACCATTGCAAAA-GAGA
EW719067       --> AGGAGCTGAAAACCTCTCCATAGCTGGTGTAACACCATTGCAAAA-GAGA
FD983705       --> AGGAGCTGAAAACCTCTCCATAGCTGGTGTAGCACCATTGCAAAA-GAGA
FD968836       --> ..................................................
FD975724       --> AGGAGCTGAAAACCTCTCCATAGCTGGTGTAGCACCATTGCAAAA-GAGA
FY431820       --> ..................................................

               601    -    651
UN13090        --> GGTTCTCAAACTTTCCTGATCCTGAACCAACTTTTCTAGCTCTTGTTTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD563983       <-- GGTTCTCA..........................................
FY452714       <-- GGTTCTCAAACTTTCCTGATCCTGAACCAACTTTTCTAGCTCTTGTTTAC
FY434598       <-- GGTTCTCAAACTTTCCTGATCCTGAACCAACTTTTCTAGCTCTTGTTTAC
FY430286       <-- GGTTCTCAAACTTTCCTGATCCTGAACCAACTTTTCTAGCTCTTGTTTAC
FY432096       <-- GGTTCTCAAACTTTCCTGATCCTGAACCAACTTTTCTAGCTCTTGTTTAC
FY438105       <-- .................GATCCTGAACCAACTTTTCTAGCTCTTGTTTAC
FY451133       <-- ......................TGAACCAACTTTTCTAGCTCTTGTTTAC
FY429131       <-- ..................................................
FY448309       <-- ..................................................
EW714317       <-- ..................................................
FD987710       <-- ..................................................
FD979730       <-- ..................................................
FD543761       <-- ..................................................
EX896100       <-- ..................................................
FD969986       <-- ..................................................
EY919303       --> GGTTCTCAAACTTTCCTGATCCTGAACCAACTTTTCTAGCTCTTGTTTAC
EW719067       --> GGT...............................................
FD983705       --> GGTTCTCAAACTTTCCTGATCCTGAACCAATTTTTCTAGCTCTTGTTTAC
FD968836       --> ..................................................
FD975724       --> GGTTCTCAAACTTTCCTGATCCTGAACCAACTTTTCTAGCTCTTGTTTAC
FY431820       --> ..................................................

               651    -    701
UN13090        --> GAGTCTCTTGTGCTTCAACGCTATGTTCAAAATCACGGATTTGGAACCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD563983       <-- ..................................................
FY452714       <-- GAGTCTCTTGTGCTTCAACGCTATGTTCAAAATCACGGATTTGGAACCCT
FY434598       <-- GAGTCTCTTGTGCTTCAACGCTATGTTCAAAATCACGGATTTGGAACCCT
FY430286       <-- GAGTCTCTTGTGCTTCAACGCTATGTTCAAAATCACGGATTTGGAACCCT
FY432096       <-- GAGTCTCTTGTGCTTCAACGCTATGTTCAAAATCACGGATTTGGAACCCT
FY438105       <-- GAGTCTCTTGTGCTTCAACGCTATGTTCAAAATCACGGATTTGGAACCCT
FY451133       <-- GAGTCTCTTGTGCTTCAACGCTATGTTCAAAATCACGGATTTGGAACCCT
FY429131       <-- GAGTCTCTTGTGCTTCAACGCTATGTTCAAAATCACGGATTTGGAACCCT
FY448309       <-- .............................................ACCCT
EW714317       <-- ..................................................
FD987710       <-- ..................................................
FD979730       <-- ..................................................
FD543761       <-- ..................................................
EX896100       <-- ..................................................
FD969986       <-- ..................................................
EY919303       --> GAGTCTCTTGTGCTTCAACGCTATGTTCAAAATCACGGATTTGGAACCCT
EW719067       --> ..................................................
FD983705       --> GAGTCTCTTGTGCTCCAACGCTATGTTCAAAATCACGGATTTGGAACCCT
FD968836       --> ..................................................
FD975724       --> GAGTCTCTTGTGCTTCAACGCTATGTTCAAAATCACGGACTTGGAATCCT
FY431820       --> ..................................................

               701    -    751
UN13090        --> TTCTCACGGGCACTTGTCCTGTAATTGTCTGCAACACGAGTAAAGAGAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD563983       <-- ..................................................
FY452714       <-- TTCTCACGGGCACTTGTCCTGTAATTGTCTGCAACACGAGTAAAGAGAGT
FY434598       <-- TTCTCACGGGCACTTGTCCTGTAATTGTCTGCAACACGAGTAAAGAGAGT
FY430286       <-- TTCTCACGGGCACTTGTCCTGTAATTGTCTGCAACACGAGTAAAGAGAGT
FY432096       <-- TTCTCACGGGCACTTGTCCTGTAATTGTCTGCAACACGAGTAAAGAGAGT
FY438105       <-- TTCTCACGGGCACTTGTCCTGTAATTGTCTGCAACACGAGTAAAGAGAGT
FY451133       <-- TTCTCACGGGCACTTGTCCTGTAATTGTCTGCAACACGAGTAAAGAGAGT
FY429131       <-- TTCTCACGGGCACTTGTCCTGTAATTGTCTGCAACACGAGTAAAGAGAGT
FY448309       <-- TTCTCACGGGCACTTGTCCTGTAATTGTCTGCAACACGAGTAAAGAGAGT
EW714317       <-- ..CTCACGAGCACTTGTC-TGAAATTGTCCGCAACACGAGTAAAGAGAGT
FD987710       <-- ......................AATTGTCAGCAACACGAGTAAAGAGAGT
FD979730       <-- ...............................................AGT
FD543761       <-- ..................................................
EX896100       <-- ..................................................
FD969986       <-- ..................................................
EY919303       --> TTCTCACGGGCACTTGTCCTGTAATTGTCAGCAACACGAGTAAAGAGAGT
EW719067       --> ..................................................
FD983705       --> TTCTCACGGGCACTTGTCCTGTAATTGTCAGCAACACGAGTAAAGAGAGT
FD968836       --> ..................................................
FD975724       --> TTCTCACGAGAACTTGTCCTGAAGTTGTCCGCAACACGAGTAAAGAGAGT
FY431820       --> ..................................................

               751    -    801
UN13090        --> GACGGTGTAAAGAGCATACTCATTATCCTCAAACAATTTCTTCGAGGACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD563983       <-- ..................................................
FY452714       <-- GACGGTGTAAAGAGCATACTCATTATCCTCAAACAATTTCTTCGAGGACC
FY434598       <-- GACGGTGTAAAGAGCATACTCATTATCCTCAAACAATTTCTTCGAGGACC
FY430286       <-- GACGGTGTAAAGAGCATACTCATTATCCTCAAACAATTTCTTCGAGGACC
FY432096       <-- GACGGTGTAAAGAGCATACTCATTATCCTCAAACAATTTCTTCGAGGACC
FY438105       <-- GACGGTGTAAAGAGCATACTCATTATCCTCAAACAATTTCTTCGAGGACC
FY451133       <-- GACGGTGTAAAGAGCATACTCATTATCCTCAAACAATTTCTTCGAGGACC
FY429131       <-- GACGGTGTAAAGAGCATACTCATTATCCTCAAACAATTTCTTCGAGGACC
FY448309       <-- GACGGTGTAAAGAGCATACTCATTATCCTCAAACAATTTCTTCGAGGACC
EW714317       <-- GACGGTGTAAAGAGCATACTCATTATC-TC-AACAATTTCTTCGAGGAC-
FD987710       <-- GACGGTGTAAAGAGCATACTCATTATCCTCAAACAATTTCTTCGAGGACA
FD979730       <-- GACGGTGTAAAGAGCATACTCATTATCCTCAAACAATTTCTTCGAAGAC-
FD543761       <-- ..................................................
EX896100       <-- ..................................................
FD969986       <-- ..................................................
EY919303       --> GACGGTGTAAAGAGCATACTCATTATCCTCAAACAATTTCTT........
EW719067       --> ..................................................
FD983705       --> GACGGTGTAAAGAGCATACTCATTATCCTCAAACAATTTCTTCGAGGACC
FD968836       --> ..................................................
FD975724       --> GACGGTGTAAAGAGCATACTCATTATCCTCAAACAATTTCTTCGAAGACC
FY431820       --> ..................................................

               801    -    851
UN13090        --> TAGGAACCACATATTCGGTTAATGTCTCATAACATGCTAGCCAGTCTTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD563983       <-- ..................................................
FY452714       <-- TAGGAACCACATATTCGGTTAATGTCTCATAACATGCTAGCCAGTCTTTC
FY434598       <-- TAGGAACCACATATTCGGTTAATGTCTCATAACATGCTAGCCAGTCTTTC
FY430286       <-- TAGGAACCACATATTCGGTTAATGTCTCATAACATGCTAGCCAGTCTTTC
FY432096       <-- TAGGAACCACATATTCGGTTAATGTCTCATAACATGCTAGCCAGTCTTTC
FY438105       <-- TAGGAACCACATATTCGGTTAATGTCTCATAACATGCTAGCCAGTCTTTC
FY451133       <-- TAGGAACCACATATTCGGTTAATGTCTCATAACATGCTAGCCAGTCTTTC
FY429131       <-- TAGGAACCACATATTCGGTTAATGTCTCATAACATGCTAGCCAGTCTTTC
FY448309       <-- TAGGAACCACATATTCGGTTAATGTCTCATAACATGCTAGCCAGTCTTTC
EW714317       <-- TAGGAACCACATATTCGGTTAATGTCTCATAACATGCTAGCCAGTCTTTC
FD987710       <-- TAGGAACCACATACTCGGTTAATGTCTCATAACATGCTAGCCAGTCTTTC
FD979730       <-- TAGGAACCACATATTCGGTTAATGTCTCATAACATGCTAGCCAGTCTTT-
FD543761       <-- ...............CGGTTAATGTCTCATAACATGCAAGCCAGTCTTTC
EX896100       <-- ..................................................
FD969986       <-- ..................................................
EY919303       --> ..................................................
EW719067       --> ..................................................
FD983705       --> TAGGA-CCACATACTCGGTTA-TGTCTCATAACATGCTAGCCAGTCTTTC
FD968836       --> ..................................................
FD975724       --> TAGGAACCACATATTCGGTTAATGTCTCATAACATGCT............
FY431820       --> ..................................................

               851    -    901
UN13090        --> TGGGAGTACTTTGGAACAACAGCAAGGAGAGTCACGAGATGCTCTGACGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD563983       <-- ..................................................
FY452714       <-- TGGGAGTACTTTGGAACAACAGCAAGGAGAGTCACGAGATGCTCTGACGC
FY434598       <-- TGGGAGTACTTTGGAACAACAGCAAGGAGAGTCACGAGATGCTCTGACGC
FY430286       <-- TGGGAGTACTTTGGAACAACAGCAAGGAGAGTCACGAGATGCTCTGACGC
FY432096       <-- TGGGAGTACTTTGGAACAACAGCAAGGAGAGTCACGAGATGCTCTGACGC
FY438105       <-- TGGGAGTACTTTGGAACAACAGCAAGGAGAGTCACGAGATGCTCTGACGC
FY451133       <-- TGGGAGTACTTTGGAACAACAGCAAGGAGAGTCACGAGATGCTCTGACGC
FY429131       <-- TGGGAGTACTTTGGAACAACAGCAAGGAGAGTCACGAGATGCTCTGACGC
FY448309       <-- TGGGAGTACTTTGGAACAACAGCAAGGAGAGTCACGAGATGCTCTGACGC
EW714317       <-- TGGGAGTACTTTGGAACAACAGCAAGGAGAGTCACGAGATGTTCTGACGC
FD987710       <-- TGGGAGTACTTTGGAACAACAGCAAGGAGAGTCACGAGATGTTCTGACGC
FD979730       <-- TGGGAATACTTTGGAACAACAGCAAGGAGAGTCACGAGATGTTCTGACGC
FD543761       <-- TGGGAATACTTTGGAACAACAGCAAGGAGAGTCACGAGATGTTCTGAGGC
EX896100       <-- ..............AACAACAGCAAGGAGAGTCACGAGATGTTCTGACGC
FD969986       <-- ..................................................
EY919303       --> ..................................................
EW719067       --> ..................................................
FD983705       --> TGGGAGTACTTTGGA...................................
FD968836       --> ..................................................
FD975724       --> ..................................................
FY431820       --> ..................................................

               901    -    951
UN13090        --> GACAATATCTTCTGCCTTAACCAAGTTTGAGAGGTCACGAACAGCTAAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD563983       <-- ..................................................
FY452714       <-- GACAATATCTTCTGCCTTAACCAAGTTTGAGAGGTCACGAACAGCTAAGC
FY434598       <-- GACAATATCTTCTGCCTTAACCAAGTTTGAGAGGTCACGAACAGCTAAGC
FY430286       <-- GACAATATCTTCTGCCTTAACCAAGTTTGAGAGGTCACGAACAGCTAAGC
FY432096       <-- GACAATATCTTCTGCCTTAACCAAGTTTGAGAGGTCACGAACAGCTAAGC
FY438105       <-- GACAATATCTTCTGCCTTAACCAAGTTTGAGAGGTCACGAACAGCTAAGC
FY451133       <-- GACAATATCTTCTGCCTTAACCAAGTTTGAGAGGTCACGAACAGCTAAGC
FY429131       <-- GACAATATCTTCTGCCTTAACCAAGTTTGAGAGGTCACGAACAGCTAAGC
FY448309       <-- GACAATATCTTCTGCCTTAACCAAGTTTGAGAGGTCACGAACAGCTAAGC
EW714317       <-- AACAATATCTTCTGGCTTAACCAAGTTTGAGAGGTCACGAACAGCTAAGC
FD987710       <-- GACAATATCTTCTGGCTTAACCAAGTTCGAGAGGTCACGAACAGCTAAGC
FD979730       <-- GACAATATCTTCTGGCTTAACCAAGTTGGAGAGGTCACGAACAGCTAAGC
FD543761       <-- GACAATATCTTCTGGCTTAACCAAGTTCGAGAGGTCACGAACAGCTAAGC
EX896100       <-- GACAATATCTTCTGGCTTAACCAAGTTCGAGAGGTCACGAACAGCTAAGC
FD969986       <-- ..................................................
EY919303       --> ..................................................
EW719067       --> ..................................................
FD983705       --> ..................................................
FD968836       --> ..................................................
FD975724       --> ..................................................
FY431820       --> ..................................................

               951    -   1001
UN13090        --> TCCCACTCTGCTTTCGGTTAATGGCATTGAGTTGACCGCGGACATTGTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD563983       <-- ..................................................
FY452714       <-- TCCCACTCTGCTTTCGGTTAATGGCATTGAGTTGACCGCGGACATTGTTA
FY434598       <-- TCCCACTCTGCTTTCGGTTAATGGCATTGAGTTGACCGCGGACATTGTTA
FY430286       <-- TCCCACTCTGCTTTCGGTTAATGGCATTGAGTTGACCGCGGACATTGTTA
FY432096       <-- TCCCACTCTGCTTTCGGTTAATGGCATTGAGTTGACCGCGGACATTGTTA
FY438105       <-- TCCCACTCTGCTTTCGGTTAATGGCATTGAGTTGACCGCGGACATTGTTA
FY451133       <-- TCCCACTCTGCTTTCGGTTAATGGCATTGAGTTGACCGCGGACATTGTTA
FY429131       <-- TCCCACTCTGCTTTCGGTTAATGGCATTGAGTTGACCGCGGACATTGTTA
FY448309       <-- TCCCACTCTGCTTTCGGTTAATGGCATTGAGTTGACCGCGGACATTGTTA
EW714317       <-- TTCCACTCTGCTTTCGGTTAATTGCATTGAGTTGACCGCGGACATTGTTA
FD987710       <-- TTCCACTCTGCTTTCGGTTAATGGCATTGAGTTGACCGCGGACATTGTTA
FD979730       <-- TTCCACTCTGCTTACGGTTAATGGCATTGAGTTGACCGCGGACATTGTTA
FD543761       <-- TTCCACTCTGCTTTCGGTTAATGGCATTGAGTTGACCGCGGACATTGTTA
EX896100       <-- TTCCACTCTGCTTTCGGTTAATGGCATTGAGTTGACCGCGGACATTGTTA
FD969986       <-- ..................................................
EY919303       --> ..................................................
EW719067       --> ..................................................
FD983705       --> ..................................................
FD968836       --> ..................................................
FD975724       --> ..................................................
FY431820       --> ..................................................

               1001   -   1051
UN13090        --> TACTCAGCGACACGAACCTTGAGATCATCCTCAATCTTGGCTACCTGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD563983       <-- ..................................................
FY452714       <-- TACTCAGCGACACGAACCTTGAGATCATCCTCAATCTTGGCTACCTGAGA
FY434598       <-- TACTCAGCGACACGAACCTTGAGATCATCCTCAATCTTGGCTACCTGAGA
FY430286       <-- TACTCAGCGACACGAACCTTGAGATCATCCTCAATCTTGGCTACCTGAGA
FY432096       <-- TACTCAGCGACACGAACCTTGAGATCATCCTCAATCTTGGCTACCTGAGA
FY438105       <-- TACTCAGCGACACGAACCTTGAGATCATCCTCAATCTTGGCTACCTGAGA
FY451133       <-- TACTCAGCGACACGAACCTTGAGATCATCCTCAATCTTGGCTACCTGAGA
FY429131       <-- TACTCAGCGACACGAACCTTGAGATCATCCTCAATCTTGGCTACCTGAGA
FY448309       <-- TACTCAGCGACACGAACCTTGAGATCATCCTCAATCTTGGCTACCTGAGA
EW714317       <-- TACTCAGCGACACGAACCTTGAGATCATCTTCAATCTTTGCAACCTGAGA
FD987710       <-- TACTCAGCGACACGAACCTTGAGATCATCCTCAATTTTGGCAACCTGAGA
FD979730       <-- TACTCAGCGACACGAACCTTGAGATCATCCTCAATCTTTGCAACCTGAGA
FD543761       <-- TACTCAGCGACACGAACCTTGAGATCATCCTCAATCTTTGCAACCTGAGA
EX896100       <-- TACTCAGCGACACGAACCTTGAGATCATCCTCAATTTTGGCAACCTGAGA
FD969986       <-- ..................................................
EY919303       --> ..................................................
EW719067       --> ..................................................
FD983705       --> ..................................................
FD968836       --> ..................................................
FD975724       --> ..................................................
FY431820       --> ........................TCATCCTCAATCTTGGCTACCTGAGA

               1051   -   1101
UN13090        --> CTGAATATTCTCCACAACCTCCTTCAAAGGTGACATTGTTGGGTACTTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD563983       <-- ..................................................
FY452714       <-- CTGAATATTCTCCACAACCTCCTTCAAAGGTGACATTGTTGGGTACTTAG
FY434598       <-- CTGAATATTCTCCACAACCTCCTTCAAAGGTGACATTGTTGGGTACTTAG
FY430286       <-- CTGAATATTCTCCACAACCTCCTTCAAAGGTGACATTGTTGGGTACTTAG
FY432096       <-- CTGAATATTCTCCACAACCTCCTTCAAAGGTGACATTGTTGGGTACTTAG
FY438105       <-- CTGAATATTCTCCACAACCTCCTTCAAAGGTGACATTGTTGGGTACTTAG
FY451133       <-- CTGAATATTCTCCACAACCTCCTTCAAAGGTGACATTGTTGGGTACTTAG
FY429131       <-- CTGAATATTCTCCACAACCTCCTTCAAAGGTGACATTGTTGGGTACTTAG
FY448309       <-- CTGAATATTCTCCACAACCTCCTTCAAAGGTGACATTGTTGGGTACTTAG
EW714317       <-- CTGAATATTCTCCACAACCTCCTTCAAAGGTGACATTGTTGGGTACTTAG
FD987710       <-- CTGAATATTCTCCACAACCTCCTTCAAAGGTGACATTGTTGGGTACTTAG
FD979730       <-- CTGAATATTCTCCACAACCTCCTTGAGAGGTGACATTGTTGGATACTTAG
FD543761       <-- CTGAATATTCTCCACAACCTCCTTCAAAGGCGACATTGTTGGGTACTTAG
EX896100       <-- CTGAATATTCTCCACAACCTCCTTCAAAGGTGACATTGTTGGGTACTTAG
FD969986       <-- ...................TCCTTCAAAGGTGACATTGTTGGATACTTAG
EY919303       --> ..................................................
EW719067       --> ..................................................
FD983705       --> ..................................................
FD968836       --> ..................................................
FD975724       --> ..................................................
FY431820       --> CTGAATATTCTCCACAACCTCCTTCAAAGGTGACATTGTTGGGTACTTAG

               1101   -   1151
UN13090        --> CTTCATCCCACACAAACCTGGTGAGATAAGAATCAACAGGAACTCCATCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD563983       <-- ..................................................
FY452714       <-- CTTCATCCCACACAAACCTGGTGAGATAAGAATCAACAGGAACTCCATCA
FY434598       <-- CTTCATCCCACACAAACCTGGTGAGATAAGAATCAACAGGAACTCCATCA
FY430286       <-- CTTCATCCCACACAAACCTGGTGAGATAAGAATCAACAGGAACTCCATCA
FY432096       <-- CTTCATCCCACACAAACCTGGTGAGATAAGAATCAACAGGAACTCCATCA
FY438105       <-- CTTCATCCCACACAAACCTGGTGAGATAAGAATCAACAGGAACTCCATCA
FY451133       <-- CTTCATCCCACACAAACCTGGTGAGATAAGAATCAACAGGAACTCCATCA
FY429131       <-- CTTCATCCCACACAAACCTGGTGAGATAAGAATCAACAGGAACTCCATCA
FY448309       <-- CTTCATCCCACACAAACCTGGTGAGATAAGAATCAACAGGAACTCCATCA
EW714317       <-- CTTCATCCCACACAAACCTGGTGAGATAAGAATCAACAGGAACTCCATCA
FD987710       <-- CTTCATCCCAGACAAACCTGGTGAGATAAGAATCAACAGGAACTCCATCA
FD979730       <-- CTTCATCCCACACAAACCTGGTGAGATAAGAATCAACAGGAACTCCATCA
FD543761       <-- CTTCATCCCACACAAACCTGGTGAGATACGAATCAACAGGAACTCCATCA
EX896100       <-- CTTCATCCCAGACAAACCTGGTGGGATAAGAATCAACAGGAACTCCATCA
FD969986       <-- CTTCATCCCACACAAACCTGGTGAGATAAGAATCAACAGGAACTCCATCA
EY919303       --> ..................................................
EW719067       --> ..................................................
FD983705       --> ..................................................
FD968836       --> ..................................................
FD975724       --> ..................................................
FY431820       --> CTTCATCCCACACAAACCTGGTGAGATAAGAATCAACAGGAACTCCATCA

               1151   -   1201
UN13090        --> ACAGTAAGAGCATTGCTCTCAACACCAGAAATCCTCTCCAGCTCCTCGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD563983       <-- ..................................................
FY452714       <-- ACAGTAAGAGCATTGCTCTCAACACCAGAAATCCTCTCCAGCTCCTCGAT
FY434598       <-- ACAGTAAGAGCATTGCTCTCAACACCAGAAATCCTCTCCAGCTCCTCGAT
FY430286       <-- ACAGTAAGAGCATTGCTCTCAACACCAGAAATCCTCTCCAGCTCCTCGAT
FY432096       <-- ACAGTAAGAGCATTGCTCTCAACACCAGAAATCCTCTCCAGCTCCTCGAT
FY438105       <-- ACAGTAAGAGCATTGCTCTCAACACCAGAAATCCTCTCCAGCTCCTCGAT
FY451133       <-- ACAGTAAGAGCATTGCTCTCAACACCAGAAATCCTCTCCAGCTCCTCGAT
FY429131       <-- ACAGTAAGAGCATTGCTCTCAACACCAGAAATCCTCTCCAGCTCCTCGAT
FY448309       <-- ACAGTAAGAGCATTGCTCTCAACACCAGAAATCCTCTCCAGCTCCTCGAT
EW714317       <-- ACAGTAAGAGCATTGCTCTCAACACCAGAGATCCTCTCCAGCTCCTCGAT
FD987710       <-- ACAGTAAGAGCATTGCTCTCAACACCAGAAATCCTCTCCAGCTCCTCGAT
FD979730       <-- ACAGTAAGAGCATTGCTCTCAACACCAGAAATCCTCTCCAGCTCCTCGAT
FD543761       <-- ACAGTAAGAGCATTGCTCTCAACACCAGAGATCCTCTCCAGCTCCTCGAT
EX896100       <-- ACAGTAAGAGCATTGCTCTCAACACCAGAAATCCTCTCCAGCTCCTCGAT
FD969986       <-- ACAGTAAGAGCATTGCTCTCAACGCCAGAAATCCTCTCCAGCTCCTCGAT
EY919303       --> ..................................................
EW719067       --> ..................................................
FD983705       --> ..................................................
FD968836       --> ..................................................
FD975724       --> ..................................................
FY431820       --> ACAGTAAGAGCATTGCTCTCAACACCAGAAATCCTCTCCAGCTCCTCGAT

               1201   -   1251
UN13090        --> CTGTCTCCTGATCTTCTGAGAAACTCCTTCCACAAAGCTATTCGACTTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD563983       <-- ..................................................
FY452714       <-- CTGTCTCCTGATCTTCTGAGAAACTCCTTCCACAAAGCTATTCGACTTGA
FY434598       <-- CTGTCTCCTGATCTTCTGAGAAACTCCTTCCACAAAGCTATTCGACTTGA
FY430286       <-- CTGTCTCCTGATCTTCTGAGAAACTCCTTCCACAAAGCTATTCGACTTGA
FY432096       <-- CTGTCTCCTGATCTTCTGAGAAACTCCTTCCACAAAGCTATTCGACTTGA
FY438105       <-- CTGTCTCCTGATCTTCTGAGAAACTCCTTCCACAAAGCTATTCGACTTGA
FY451133       <-- CTGTCTCCTGATCTTCTGAGAAACTCCTTCCACAAAGCTATTCGACTTGA
FY429131       <-- CTGTCTCCTGATCTTCTGAGAAACTCCTTCCACAAAGCTATTCGACTTGA
FY448309       <-- CTGTCTCCTGATCTTCTGAGAAACTCCTTCCACAAAGCTATTCGACTTGA
EW714317       <-- CTGTCTCCTGATCTTCTGAGAAACTCCTTCCACAAAGCTATTCGACTTGA
FD987710       <-- CTGTCTCCTGATCTTCTGAGAAACTCCTTCCACAAAGCTATTCGACTTGA
FD979730       <-- CTGTCTCCTGATCTTCTGAGAAACTCCTTCCACGAAGCTATTCGACTTGA
FD543761       <-- CTGTCTCCTGATCTTCTGAGAAACTCCTTCCACAAAGCTATTCGACTTGA
EX896100       <-- CTGTCTCCTGATCTTCTGAGAAACTCCTTCCACAAAGCTATTCGACTTGA
FD969986       <-- CTGTCTCCTGATCTTCTGAGAAACTCCTTCCACAAAGCTATTCGACTTGA
EY919303       --> ..................................................
EW719067       --> ..................................................
FD983705       --> ..................................................
FD968836       --> ..................................................
FD975724       --> ..................................................
FY431820       --> CTGTCTCCTGATCTTCTGAGAAACTCCTTCCACAAAGCTATTCGACTTGA

               1251   -   1301
UN13090        --> GCAGATCATCGCCGAGGGCGAGAAGAGAATCTAAGGTTCCAACACGAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD563983       <-- ..................................................
FY452714       <-- GCAGATCATCGCCGAGGGCGAGAAGAGAATCTAAGGTTCCAACACGAAGA
FY434598       <-- GCAGATCATCGCCGAGGGCGAGAAGAGAATCTAAGGTTCCAACACGAAGA
FY430286       <-- GCAGATCATCGCCGAGGGCGAGAAGAGAATCTAAGGTTCCAACACGAAGA
FY432096       <-- GCAGATCATCGCCGAGGGCGAGAAGAGAATCTAAGGTTCCAACACGAAGA
FY438105       <-- GCAGATCATCGCCGAGGGCGAGAAGAGAATCTAAGGTTCCAACACGAAGA
FY451133       <-- GCAGATCATCGCCGAGGGCGAGAAGAGAATCTAAGGTTCCAACACGAAGA
FY429131       <-- GCAGATCATCGCCGAGGGCGAGAAGAGAATCTAAGGTTCCAACACGAAGA
FY448309       <-- GCAGATCATCGCCGAGGGCGAGAAGAGAATCTAAGGTTCCAACACGAAGA
EW714317       <-- GCAGATCATCGCCGAGGGCGAGAAGAGAATCTAAGGTTCCAACACGAAGA
FD987710       <-- GCAGATCATCGCCGAGGGCGAGAAGAGAATCTAAGGTTCCAACACGAAGA
FD979730       <-- GCAGATCATCGCCGAGGGCGAGAAGAGAATCTAAGGTTCCAACACGAAGA
FD543761       <-- GCAGATCATCTCCGAGGGCGAGAAGAGAATCTAAGGTTCCAACACGAAGA
EX896100       <-- GCGGATCATCGCCGAGGGCGAGAAGAGAATCTAAGGTTCCAACACGAAGA
FD969986       <-- GCAGATCATCGCCGAGGGCGAGAAGAGAATCTAAGGTTCCAACACGAAGA
EY919303       --> ..................................................
EW719067       --> ..................................................
FD983705       --> ..................................................
FD968836       --> ..................................................
FD975724       --> ..................................................
FY431820       --> GCAGATCATCGCCGAGGGCGAGAAGAGAATCTAAGGTTCCAACACGAAGA

               1301   -   1351
UN13090        --> TTAGGGATGTTGAACCGATAAAGAGGAGTATCAAAGGAATGCTTGGAGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD563983       <-- ..................................................
FY452714       <-- TTAGGGATGTTGAACCGATAAAGAGGAGTATCAAAGGAATGCTTGGAGAT
FY434598       <-- TTAGGGATGTTGAACCGATAAAGAGGAGTATCAAAGGAATGCTTGGAGAT
FY430286       <-- TTAGGGATGTTGAACCGATAAAGAGGAGTATCAAAGGAATGCTTGGAGAT
FY432096       <-- TTAGGGATGTTGAACCGATAAAGAGGAGTATCAAAGGAATGCTTGGAGAT
FY438105       <-- TTAGGGATGTTGAACCGATAAAGAGGAGTATCAAAGGAATGCTTGGAGAT
FY451133       <-- TTAGGGATGTTGAACCGATAAAGAGGAGTATCAAAGGAATGCTTGGAGAT
FY429131       <-- TTAGGGATGTTGAACCGATAAAGAGGAGTATCAAAGGAATGCTTGGAGAT
FY448309       <-- TTAGGGATGTTGAACCGATAAAGAGGAGTATCAAAGGAATGCTTGGAGAT
EW714317       <-- TTAGGGATGTTGAACCGATGAAGAGGAGTATCAAAGGAATGCTTGGAGAT
FD987710       <-- TTAGGGATGTTGAACCGATAAAGAGGAGTATCAAAGGAATGCTTGGAGAT
FD979730       <-- TTAGGGATGTTGAACCGATAAAGAGGAGTATCAA-GGAATGCTTGGAGAT
FD543761       <-- TTAGGGATGTTGAACCGATAAAGAGGAGTATCAAAGGAATGCTTGGAGAT
EX896100       <-- TTAGGGATGTTGAACCGATAAAGAGGAGTATCAAAGGAATGCTTGGAGAT
FD969986       <-- TTAGGGATGTTGAACCGATAAAGAGGAGTATCAAAGGAATGCTTGGAGAT
EY919303       --> ..................................................
EW719067       --> ..................................................
FD983705       --> ..................................................
FD968836       --> ..................................................
FD975724       --> ..................................................
FY431820       --> TTAGGGATGTTGAACCGATAAAGAGGAGTATCAAAGGAATGCTTGGAGAT

               1351   -   1401
UN13090        --> CTGCTCTTGAAGACGATTCCACGAGGTGGAAGAAGAGTCCTTCACTGGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD563983       <-- ..................................................
FY452714       <-- CTGCTCTTGAAGACGATTCCACGAGGTG-AAGAAGAGTCCTTCACTGGTA
FY434598       <-- CTGCTCTTGAAGACGATTCCACGAGGTGGAAGAAGAGTCCTTCACTGGTA
FY430286       <-- CTGCTCTTGAAGACGATTCCACGAGG-GGAAGAAGAGTCCT.........
FY432096       <-- CTGCTCTTGAAGACGATTCCACGAGGTGGAAGAAGAGTCCTTCACTGGTA
FY438105       <-- CTGCTCTTGAAGACGATTCCACGAGG-GGAAGAAG...............
FY451133       <-- CTGCTCTTGAAGACGATTCCACGAGGTGGAAGAAGAGTCCTTCACTGGTA
FY429131       <-- CTGCTCTTGAAGACGATTCCACGAGGTGGAAGAAGAGTCCTTCACTGGTA
FY448309       <-- CTGCTCTTGAAGACGATTCCACGAGGTGGAAGAAGAGTCCTTCACcctc.
EW714317       <-- CTGCTCCTGAAGACGATTCCACGAGGTAGAAGAAGAGTCCTTCACTGG..
FD987710       <-- CTGCTCCTGAAGACGATTCCACGAGGTGGAAGAAGAGTCCTTCACTGGTA
FD979730       <-- CTGCTCTTGAAGACGATTCCACGAGGTGGAAGAAGAGTCTTTCACTGGTA
FD543761       <-- CTGCTCTTGAAGACGATTCCACGAGGTGGAAGAAGAGTCCTTCACTGGTA
EX896100       <-- CTGCTCCTGAAGACGATTCCACGAGGTGGAAGAAGAGTCCTTCACTGGTA
FD969986       <-- CTGCTCTTGAAGACGATTCCACGAGGTGGAAGAAGAGTCCTTCACTGGTA
EY919303       --> ..................................................
EW719067       --> ..................................................
FD983705       --> ..................................................
FD968836       --> ..................................................
FD975724       --> ..................................................
FY431820       --> CTGCTCTTGAAGACGATTCCACGAGGTGGAAGAAGAGTCCTTCACTGGTA

               1401   -   1451
UN13090        --> GAGACACCACCCAGTACCTCGAAGTCATTGTTTCTC--AATCTGACTCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD563983       <-- ..................................................  Raphanus sativus var. oleiformis
FY452714       <-- GAGACACCACC.......................................  Raphanus sativus cv GSK3-1
FY434598       <-- GAGACACCACCCAGTACCT-GAAGTC........................  Raphanus sativus cv GSK3-1
FY430286       <-- ..................................................  Raphanus sativus cv GSK3-1
FY432096       <-- GAGACACCACCCAGTACCT-GAAGTCA.......................  Raphanus sativus cv GSK3-1
FY438105       <-- ..................................................  Raphanus sativus cv GSK3-1
FY451133       <-- GAGACACCACCCAGTACCT-GAAGT.........................  Raphanus sativus cv GSK3-1
FY429131       <-- GAGACACCACCCAGTACCTTGAAGTCATT-TTTCTC--AATCTGACTCTC  Raphanus sativus cv GSK3-1
FY448309       <-- ..................................................  Raphanus sativus cv GSK3-1
EW714317       <-- ..................................................  Raphanus sativus var. oleiformis
FD987710       <-- GAGACACCACCCAGTACCTCGAAGTCATTGTTTCTCtcaatctcc.....  Raphanus raphanistrum subsp. landra
FD979730       <-- GAGACACCACCCAGTACCTCGAAGTCATTGTTTCTC--AATCTGACTCTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD543761       <-- GAGACACCACCCAGTACCTCGAAGTCATTGTTTCTC--AATCTGACTCTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX896100       <-- GAGACACCACCCAGTACCTCGAAGTCATTGTTTCTCTCAATCTGACTCTC  Raphanus sativus cv Early Scarlet Globe
FD969986       <-- GAGACACCACCCAGTACCTCGAAGTCATTGTTTCTCTCAATCTGACTCTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY919303       --> ..................................................  Raphanus raphanistrum subsp. landra
EW719067       --> ..................................................  Raphanus sativus var. oleiformis
FD983705       --> ..................................................  Raphanus raphanistrum subsp. landra
FD968836       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD975724       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY431820       --> GAGACACCACCCAGTACCTTGAAGTCATTGTTTCTC--AATCTGACTCTC  Raphanus sativus cv GSK3-1

               1451   -   1501
UN13090        --> TCTC--TCTGTCTTCTTCTTCTCCGATGGATCTCTCTCT--ACTTCTTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD563983       <-- ..................................................
FY452714       <-- ..................................................
FY434598       <-- ..................................................
FY430286       <-- ..................................................
FY432096       <-- ..................................................
FY438105       <-- ..................................................
FY451133       <-- ..................................................
FY429131       <-- TCT...............................................
FY448309       <-- ..................................................
EW714317       <-- ..................................................
FD987710       <-- ..................................................
FD979730       <-- TCTCCCTCTGTCTTCTTCTTCTCTGATGGATCTCTCTCT--ACTTCTTCC
FD543761       <-- TCTC----TGTCTTCTTCTTCTCCGATGGATCTCTCTCTCTACTTCTTCC
EX896100       <-- TCTC--CCTCTCTTCTTCTTCTCCGATGGATCTCTCTCT--ACTTCTTtc
FD969986       <-- TCT---TCT-TCTGCTTCTTCTCCGATcc.....................
EY919303       --> ..................................................
EW719067       --> ..................................................
FD983705       --> ..................................................
FD968836       --> ..................................................
FD975724       --> ..................................................
FY431820       --> TCTC--TCTGTCTTCTTCTTCTCCG.........................

               1501   -   1551
UN13090        --> CC
                   ~~
FD563983       <-- ..
FY452714       <-- ..
FY434598       <-- ..
FY430286       <-- ..
FY432096       <-- ..
FY438105       <-- ..
FY451133       <-- ..
FY429131       <-- ..
FY448309       <-- ..
EW714317       <-- ..
FD987710       <-- ..
FD979730       <-- C.
FD543761       <-- CC
EX896100       <-- c.
FD969986       <-- ..
EY919303       --> ..
EW719067       --> ..
FD983705       --> ..
FD968836       --> ..
FD975724       --> ..
FY431820       --> ..