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Alignment for radish unigene UN13101

               1      -     51
UN13101        --> GGGGGGCCGAGTAAAATTTCGAAAATTACAACAGTAAATCGATCTGGTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD544523       <-- ..................................................
EV546071       <-- ..................................................
FD568679       --> GGGGGGCCGAGTAAAATTTCGAAAATTACAACAGTAAATCGATCTGGTCC
FD570809       --> ..............................................ggCC
EX903529       --> ..................................................
EY941495       --> ..................................................
FD548321       --> ..................................................
EV550869       --> ..................................................
FD563092       --> ..................................................
EX754088       --> ..................................................
EW732569       --> ..................................................

               51     -    101
UN13101        --> CTTAATTTAGGATCTTCTTCTCTGAATCTCACGACGCCTAGGTCGATCGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD544523       <-- ..................................................
EV546071       <-- ..................................................
FD568679       --> CTTAATTTAGGATCTTCTTCTCTGAATCTCACGACGCCTAGGTCGATCGT
FD570809       --> CTTAATTTAGGATCTTCTTCTCTGAAACTCACGACGCCTAGGTCGATCGT
EX903529       --> ...........................CTCACGACGCCTAGGTCGATCGT
EY941495       --> ..............................ggGACGCCTAGGTCGATCGT
FD548321       --> .................................ggGCCTAGGTCGATCGT
EV550869       --> .....................................ggAGGTCGATCGT
FD563092       --> .....................................ggAGGTCGATCGT
EX754088       --> ..................................................
EW732569       --> ..................................................

               101    -    151
UN13101        --> TGAGCTCTGTTTTCTGATATCGAATCGAGAAAGAAGGCAGCAAGCAATGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD544523       <-- ..................................................
EV546071       <-- ..................................................
FD568679       --> TGAGCTCTGTTTTCTGATATCGAATCGAGAAAAAAGGCAGCAAGCAATGG
FD570809       --> TGAGCTCCGTTTTCTGATATCGAATCGAGAAAGAAGGCAGCAAGCAATGG
EX903529       --> TGAGCTCTGTTTTCTGATATCGAATCGAGAAAGAAGGCAGCAAGCAATGG
EY941495       --> TGAGCTCTGTTTTCTGATATCGAATCGAGAAAGAAGGCAGCAAGCAATGG
FD548321       --> TGAGCTCTGTTTTCTGATAACGAATCGAGAAAGAAGGCAGCAA----TGG
EV550869       --> TGAGCTCTGTTTTCTGATAACGAATCGAGAAAGAAGGCAGCAA----TGG
FD563092       --> TGAGCTCTGTTTTCTGATATCGAATCGAGAAAGAAGGCAGCAAGCAATGG
EX754088       --> ..................................................
EW732569       --> ..................................................

               151    -    201
UN13101        --> GGAGCTTGGGGACGTTGCTGAGGTATCCAGATGACGTATATCCGCTGCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD544523       <-- ..................................................
EV546071       <-- ..................................................
FD568679       --> GGAGCTTGGGGACGTTGCTGAGGTATCCAGATGACGTATATCCGCTGCTG
FD570809       --> GGAGCTTGGGGACGTTGCTGAGGTATCCAGATGACGTATATCCGCTGCTG
EX903529       --> GGAGCTTGGGGACGTTGCTGAGGTATCCAGATGACGTATATCCGCTGCTG
EY941495       --> GGAGCTTGGGGACGTTGCTGAGGTATCCAGATGACGTATATCCGCTGCTG
FD548321       --> GGAGCTTGGGGACGTTGCTGAGGTATCCGGATGATGTATATCCGCTGCTG
EV550869       --> GGAGCTTGGGGACGTTGCTGAGGTATTCGGATGATGTATATCCGCTGCTG
FD563092       --> GGAGCTTGGGGACGTTGCTGAGGTATCCAGATGACGTATATCCGCTGCTG
EX754088       --> ..................................................
EW732569       --> ..................................................

               201    -    251
UN13101        --> AAGATGAAACGAGCCATCGAGGAAGCGGAGAAGCAGATCCCTCCCGAGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD544523       <-- ..................................................
EV546071       <-- ..................................................
FD568679       --> AAGATGAAACGAGCCATCGAGGAAGCGGAGAAGCAGATCCCTCCCGAGCC
FD570809       --> AAGATGAAACGAGCCATCGAGGAAGCGGAGAAGCAGATCCCTCCCGAGCC
EX903529       --> AAGATGAAACGAGCCATCGAGGAAGCGGAGAAGCAGATCCCTCCCGAGCC
EY941495       --> AAGATGAAACGAGCCATCGAGGAAGCGGAGAAGCAGATCCCTCCCGAGCC
FD548321       --> AAGATGAAACGAGCGATCGAGGAAGCGGAGAAGCAGATCCCTCCCGTGCC
EV550869       --> AAGATGAAACGAGCGATCGAGGAAGCGGAGAAGCAGATCCCTCCCGAGCC
FD563092       --> AAGATGAAACGAGCCATCGAGGAAGCGGAGAAGCAGATCCCTCCCGAGCC
EX754088       --> ..................................................
EW732569       --> ..................................................

               251    -    301
UN13101        --> ACACTGGGGTTTCTGCTATTCAATGCTCCACAAGGTCTCTCGTAGCTTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD544523       <-- ..................................................
EV546071       <-- ..................................................
FD568679       --> ACACTGGGGTTTCTGCTATTCAATGCTCCACAAGGTCTCTCGTAGCTTCT
FD570809       --> ACACTGGGGTTTCTGCTATTCAATGCTCCACAAGGTCTCTCGTAGCTTCT
EX903529       --> ACACTGGGGTTTCTGCTATTCAATGCTCCACAAGGTCTCTCGTAGCTTCT
EY941495       --> ACACTGGGGTTTCTGCTATTCAATGCTCCACAAGGTCTCTCGTAGCTTCT
FD548321       --> ACACTGGGGTTTCTGCTATTCAATGCTCCACAAGGTCTCTCGTAGCTTCT
EV550869       --> ACACTGGGGTTTCTGCTATTCAATGCTCCACAGGGTCTCTCGTAGCTTCT
FD563092       --> ACACTGGGGTTTCTGCTATTCAATGCTCCACAAGGTCTCTCGTAGCTTCT
EX754088       --> ..................................................
EW732569       --> ..................................................

               301    -    351
UN13101        --> CTCTCGTTATCCAGCAACTTGGTACCGATCTTCGTAACGCTGTGTGTGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD544523       <-- ..................................................
EV546071       <-- ..................................................
FD568679       --> CTCTCGTT..........................................
FD570809       --> CTCTCGTTATCCAGCAACTTGGTACCGATCTTCGTAACGCTGTGTGTGTG
EX903529       --> CTCTCGTTATCCAGCAACTTGGTACCGATCTTCGTAACGCTGTGTGTGTG
EY941495       --> CTCTCGTTATCCAGCAACTTGGTACCGATCTTCGTAACGCTGTGTGTGTG
FD548321       --> CTCTCGTTATCCAGCAACTTGTTACCGATCTTCGTAACGCTGTGTGTGTG
EV550869       --> CTCTCGTTATCCAGCAACTTGGTACCGATCTTCGTAACGCTGTGTGTGTG
FD563092       --> CTCTCGTTATCCAGCAACTTGGTACCGATCTTCGTAACGCTGTGTGTGTG
EX754088       --> ..................................................
EW732569       --> ..................................................

               351    -    401
UN13101        --> TTCTACTTGGTTCTCCGAGCTCTTGATACAGTAGAGGATGACACAAGCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD544523       <-- ..................................................
EV546071       <-- ..................................................
FD568679       --> ..................................................
FD570809       --> TTCTACTTGGTTCTCCGAGCTCTTGATACAGTAGAGGATGACACAAGCAT
EX903529       --> TTCTACTTGGTTCTCCGAGCTCTTGATACAGTAGAGGATGACACAAGCAT
EY941495       --> TTCTACTTGGTTCTCCGAGCTCTTGATACAGTAGAGGATGACACAAGCAT
FD548321       --> TTCTACTTGGTTCTCCGAGCTCTTGATACAGTAGAGGATGACACAAGCAT
EV550869       --> TTCTACTTGGTTCTCCGAGCTCTTGATACAGTAGAGGATGACACAAGCAT
FD563092       --> TTCTACTTGGTTCTCCGAGCTCTTGATACAGTAGAGGATGACACAAGCAT
EX754088       --> ..................................................
EW732569       --> ..................................................

               401    -    451
UN13101        --> ACCAACTGATGAAAAGCTGCCCATCTTGATAGCGTTCCACCGTCACATCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD544523       <-- ..................................................
EV546071       <-- ..................................................
FD568679       --> ..................................................
FD570809       --> ACCAACTGATGAAAAGCTGCCCATCTTGATAGCGTTCCACCGTCACATCT
EX903529       --> ACCAACTGATGAAAAGCTGCCCATCTTGATAGCGTTCCACCGTCACATCT
EY941495       --> ACCAACTGATGAAAAGCTGCCCATCTTGATAGCGTTCCACCGTCACATCT
FD548321       --> ATCAACTGATGAAAAGCTGCCCATCTTGATAGCGTTCCACCGTCACATCT
EV550869       --> ATCAACTGATGAAAAGCTGCCCATCTTGATAGCGTTCCACCGTCACATCT
FD563092       --> ACCAACTGATGAAAAGCTGCCCATCTTGATAGCGTTCCACCGTCACATCT
EX754088       --> ........................................gGTCACATCT
EW732569       --> ..................................................

               451    -    501
UN13101        --> ACGATACTGACTGGCACTATTCATGTGGTACGAAGGAGTACAAGGTTCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD544523       <-- ..................................................
EV546071       <-- ..................................................
FD568679       --> ..................................................
FD570809       --> ACGATACTGACTGGCACTATTCATGTGGTACGAAGGAGTACAAGGTTCTG
EX903529       --> ACGATACTGACTGGCACTATTCATGTGGTACGAAGGAGTACAAGGTTCTG
EY941495       --> ACGATACTGACTGGCACTATTCATGTGGTACGAAGGAGTACAAGGTTCTG
FD548321       --> ACGATACTGACTGGCACTATTCATGTGGTACGAAGGAGTACAAGGTTCTG
EV550869       --> ACGATACTGACTGGCACTATTCATGTGGTACGAAGGAGTACAAGGTTCTG
FD563092       --> ACGATACTGACTGGCACTATTCATGTGGTACGAAGGAGTACAAGGTTCTG
EX754088       --> ACGATACTGACTGGCACTATTCATGTGGTACGAAGGAGTACAAGGTTCTG
EW732569       --> ..................................................

               501    -    551
UN13101        --> ATGGACCAATTTCACCATGTTGCTGCAGCTTTTCTTGAACTTGAAAAAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD544523       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV546071       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD568679       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD570809       --> ATGGACCAATTTCACCATGTTGCTGCAGCTTTTCTTGAACTCGAAAAAGG  Raphanus sativus cv Early Scarlet Globe
EX903529       --> ATGGACCAATTTCACCATGTTGCTGCAGCTTTTCTTGAACTTGAAAAAGG  Raphanus sativus cv Rat-Tail Radish #3870
EY941495       --> ATGGACCAATTTCACCATGTTGCTGCAGCTTTTCTTGAACTCGAAAAAGG  Raphanus sativus cv Early Scarlet Globe
FD548321       --> ATGGACCAATTTCACCATGTTGCTGCAGCTTTTCTTGAACTTGAAAAAGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV550869       --> ATGGACCAATTTCACCATGTTGCTGCAGCTTTTCTTGAACTTGAAAAAGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD563092       --> ATGGACCAATTTCACCATGTTGCTGCAGCTTTTCTTGAACTCGAAAAAGG  Raphanus sativus var. oleiformis
EX754088       --> ATGGACCAATTTCACCATGTTGCTGCAGCTTTTCTTGAACTTGAAAAAGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EW732569       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870

               551    -    601
UN13101        --> GTATCAAGAGGCTATCGAGGAAATTACTAAAAGAATGGGTGCAGGAATGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD544523       <-- ..................................................
EV546071       <-- ..................................................
FD568679       --> ..................................................
FD570809       --> GTATCAAGAGGCTATCGAGGAAATTACTAAAAGAATGGGTGCAGGAATGG
EX903529       --> GTATCAAGAGGCTATCGAGGAAATTACTAAAAGAATGGGTGCAGGAATGG
EY941495       --> GTATCAAGAGGCTATCGAGGAAATTGCTAAAAGAATGGGTGCAGGAATGG
FD548321       --> GCATCAAGAAGCTATCGAGGAAATTACTAAAAGAATGGGTGCAGGAATGG
EV550869       --> GTATCAAGAAGCTATCGAGGAAATTACTAAAAGAATGGGTGCAGGAATGG
FD563092       --> GTATCAAGAGGCTATCGAGGAAATTACTAAAAGAATGGGTGCAGGAATGG
EX754088       --> GTATCAAGAGGCTATCGAGGAAATTACTAAAAGAATGGGAGCAGGAATGG
EW732569       --> .........................................gAGGAATGG

               601    -    651
UN13101        --> CCAAGTTTATTTGCCAAGAGGTAGAAACTGTTGATGACTACGATGAGTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD544523       <-- ..................................................
EV546071       <-- ..................................................
FD568679       --> ..................................................
FD570809       --> CCAAGTTTATTTGCCAAGAGGTAGAAACTGTTGATGACTACGATGAGTAC
EX903529       --> CCAAGTTTATTTGCCAAGAGGTAGAAACTGTTGATGACTACGATGAGTAC
EY941495       --> CCAAGTTTATTTGCCAAGAGGTAGAAACTGTTGATGACTACGATGAGTAC
FD548321       --> CCAAGTTTATTTGCCAAGAGGTAGAAACTGTTGATGACTACGATGAGTAC
EV550869       --> CCAAGTTTATTTGCCAAGAGGTAGAAACTGTTGATGACTACGATGAGTAC
FD563092       --> CCAAGTTTATTTGCCAAGAGGTAGAAACTGTTGATGACTACGATGAGTAC
EX754088       --> CCAAGTTTATTTGCCAAGAGGTAGAAACTGTTGATGACTACGATGAGTAC
EW732569       --> CCAAGTTTATTTGCCAAGAGGTAGAAACTGTTGATGACTACGATGAGTAC

               651    -    701
UN13101        --> TGCCACTATGTTGCTGGACTTGTGGGTTTAGGTCTGTCGAAACTCTTCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD544523       <-- ..................................................
EV546071       <-- ..................................................
FD568679       --> ..................................................
FD570809       --> TGCCACTATGTTGCTGGACTTGTAGGTTTAGGTCTGTCGAAACTCTTCCT
EX903529       --> TGCCACTATGTTGCTGGACTTGTGGGTTTAGGTCTGTCGAAACTCTTCCT
EY941495       --> TGCCACTATGTTGCTGGACTTGTGGGTTTAGGTCTGTCGAAACTCTTCCT
FD548321       --> TGCCACTATGTTGCTGGACTTGTGGGTTTAGGTCTGTCGAAACTCTTCCT
EV550869       --> TGCCACTATGTTGCTGGACTTGTGGGTTTAGGTCTGTCGAAACTCTTCCT
FD563092       --> TGCCACTATGTTGCTGGACTTGTGGGTTTAGGTCTGTCGAAACTCTTCCT
EX754088       --> TGCCACTATGTTGCTGGACTTGTGGGTTTAGGTCTGTCGAAACTCTTCCT
EW732569       --> TGCCACTATGTTGCTGGACTTGTGGGTTTAGGTCTGTCGAAACTCTTCCT

               701    -    751
UN13101        --> AGCTTCGGGAACAGAAGCTTTGTTGCCAGACTGGGAGCGGATTTCCAATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD544523       <-- ..................................................
EV546071       <-- ..................................................
FD568679       --> ..................................................
FD570809       --> AGCTTCGGGAACAGAAGCTTTGTTGCCAGACTGGGAGCGGATTTCCAttc
EX903529       --> AGC...............................................
EY941495       --> AGCTTCGGGAACAGAAGCTTTGTTGCCAGACTGGGAGCGGATTTCCAATT
FD548321       --> AGCTTCGGGAACAGAAGCTTTGTTGCCAGACTGGGAGCGGATTTCCAATT
EV550869       --> AGCTTCGGGAACAGAAGCTTTGTTGCCAGACTGGGAGCGGATTTCCAATT
FD563092       --> AGCTTCGGGAACAGAAGCTTTGTTGCCAGACTGGGAGCGGATTTCCAATT
EX754088       --> AGCTTCGGGAACAGAAGCTTTGTTGCCAGACTGGGAGCGGATTTCCAATT
EW732569       --> AGCTTCGGGAACAGAAGCTTTGTTGCCAGACTGGGAGCGGATTTCCAATT

               751    -    801
UN13101        --> CAATGGGTTTATTTCTTCAGAAAACAAACATTATCAGAGATTATCTTGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD544523       <-- ............................................CTTGAA
EV546071       <-- ..................................................
FD568679       --> ..................................................
FD570809       --> a.................................................
EX903529       --> ..................................................
EY941495       --> CAATGGGTTTATTTCTTCAGAAAACAA-CATTATCAGAGATTATCTTGAA
FD548321       --> CAATGGGTTTATTTCTTCAGAAAACAAACATTATCAGAGATTATCTTGAA
EV550869       --> CA................................................
FD563092       --> -AATGGGTTTATTTCTTCAGAAAACAAACATTATCAGAGATTATCTTGAA
EX754088       --> CAATGGGTTTATTTCTTCAGAAAACAAACATTATCAGAGATTATCTTGAG
EW732569       --> CAATGGGTTTATTTCTTCAGAAAACAAACATTATCGGAGATTATCTTGAA

               801    -    851
UN13101        --> GACATTAATGAAATACCAAAGTCTCGCATGTTTTGGCCTCGCAAGATTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD544523       <-- GACATTAATGAAATACCAAAGTCTCGCATGTTTTGGCCTCGCAAGATTTG
EV546071       <-- ..................................................
FD568679       --> ..................................................
FD570809       --> ..................................................
EX903529       --> ..................................................
EY941495       --> GACAT-AATGAAATAC-AAAGTCTCGCATGTTT-GGCCTCGCA-GA-TTG
FD548321       --> GACATTAATGAAATACCAAAGTCTCGCATGTTT-GGCCTCGCA-GATTTG
EV550869       --> ..................................................
FD563092       --> GACATTAATGAAATACCAAAGTCTCGCATGTTTTGGCCTCGCAAGATTTG
EX754088       --> GACATTAATGAAATACCAAAGTCTCGCATGTTTTGGCCTCGCGAGATTTG
EW732569       --> GACATTAATGAAATACCAAAGTCTCGCATGTTTTGGCCTCGCAAGATTTG

               851    -    901
UN13101        --> GGGCAAGTATGCTGACAAGCTAGAGGACTTAAAATACGAGGAGAATTCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD544523       <-- GGGCAAGTATGCTGACAAGCTAGAGGACTTAAAATACGAGGAGAATTCAA
EV546071       <-- ..................................................
FD568679       --> ..................................................
FD570809       --> ..................................................
EX903529       --> ..................................................
EY941495       --> GGGCAA-TATGCTGACA-GCTAGAGacta.....................
FD548321       --> GGGCA-GTATGCTGACA-GCTAGAGGACTTAAAATACGAGGAGAAT-C-A
EV550869       --> ..................................................
FD563092       --> GGGCAAATATGC......................................
EX754088       --> GGGCAAATATGCTGACAAGCTAGAGGACTTAAAATACGAGGAGAATTCAA
EW732569       --> GGGCAAGTATGCTGACAAGCTAGAGGACTTAAAATACGAGGAGAATTCAA

               901    -    951
UN13101        --> CTAAAGCAGTGCATTGCTTGAATGAAATGGTCACCAATGCATTGACGCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD544523       <-- CTAAAGCAGTGCATTGCTTGAATGAAATGGTCACCAATGCATTGACGCAT
EV546071       <-- ..................................................
FD568679       --> ..................................................
FD570809       --> ..................................................
EX903529       --> ..................................................
EY941495       --> ..................................................
FD548321       --> CTAAAGCAGTGCATgct.................................
EV550869       --> ..................................................
FD563092       --> ..................................................
EX754088       --> CTAAAGCAGTGCATTGCTTGAATGAAATGGTCACCAATGCATTGACGCAT
EW732569       --> CTAAAGCAGTGCATTGCTTGAATGAAATGGTCACCAATGCATTGACGCAT

               951    -   1001
UN13101        --> ATTGAAGATTGCCTGAAGTACATGGCTGTGTTGCGTGATCCTTCTATATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD544523       <-- ATTGAAGATTGCCTGAAGTACATGGCTGTGTTGCGTGATCCTTCTATATT
EV546071       <-- ..................................................
FD568679       --> ..................................................
FD570809       --> ..................................................
EX903529       --> ..................................................
EY941495       --> ..................................................
FD548321       --> ..................................................
EV550869       --> ..................................................
FD563092       --> ..................................................
EX754088       --> ATTGAAGATTGCCTGAAGTACATGGCTGTGTTGCGTGATCCTTCTATATT
EW732569       --> ATTGAAGATTGCCTGAAGTACATGGCTGTGTTGCGTGATCCTTCTATATT

               1001   -   1051
UN13101        --> TCGGTTCTGTGCTATCCCTCAGATCATGGCGATTGGAACACTTGCATTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD544523       <-- TCGGTTCTGTGCTATCCCTCAGATCATGGCGATTGGAACACTTGCATTGT
EV546071       <-- ..................................................
FD568679       --> ..................................................
FD570809       --> ..................................................
EX903529       --> ..................................................
EY941495       --> ..................................................
FD548321       --> ..................................................
EV550869       --> ..................................................
FD563092       --> ..................................................
EX754088       --> TCGGTTCTGTGCTATCCCTCAGATCATGGCGATTGGAACACTTGCATTGT
EW732569       --> TCGGTTCTGTGCTATCCCTCAGATCATGGCGATTGGAACACTTGCATTGT

               1051   -   1101
UN13101        --> GCTATAACAATGTACAAGTATTTAGAGGCGTGGTGAAACTGAGGCGAGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD544523       <-- GCTATAACAATGTACAAGTATTTAGAGGCGTGGTGAAACTGAGGCGAGGT
EV546071       <-- ..TATAACAATGTACAAGTATTTAGAGGCGTGGTGAAACTGAGGCGAGGT
FD568679       --> ..................................................
FD570809       --> ..................................................
EX903529       --> ..................................................
EY941495       --> ..................................................
FD548321       --> ..................................................
EV550869       --> ..................................................
FD563092       --> ..................................................
EX754088       --> GCTATAACAATGTACAAGTATTTAGAGGCGTGGTGAAACTGAGGCGAGGT
EW732569       --> GCTATAACAATGTACAAGTATTTAGAGGCGTGGTGAAACTGAGGCGAGGT

               1101   -   1151
UN13101        --> CTAACTGCCAAAGTCATTGATCGCACAAAGACAATGGAAGATGTCTATGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD544523       <-- CTAACTGCCAAAGTCATTGATCGCACAAAGACAATGGAAGATGTCTATGG
EV546071       <-- CTAACTGCCAAAGTCATTGATCGCACAAAGACAATGGAAGATGTCTATGG
FD568679       --> ..................................................
FD570809       --> ..................................................
EX903529       --> ..................................................
EY941495       --> ..................................................
FD548321       --> ..................................................
EV550869       --> ..................................................
FD563092       --> ..................................................
EX754088       --> CTAACTGCCAAAGTCATTGATCGCACAAAGACAATGGCTGATGTCTAT..
EW732569       --> CTAACTGCCAAAGTCATTGATCGCACAAAGACAATGGAAGATGTCTATGG

               1151   -   1201
UN13101        --> AGCTTTCTATGATTTTGCTTCCATGCTAAAAACAAAGGTCGACAAGAACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD544523       <-- AGCTTTCTATGATTTTGCTTCCATGCTAAAAACAAAGGTCGACAAGAACG
EV546071       <-- AGCTTTTTATGATTTTGCTTCCATGCTAAAAACAAAGGTCGACAAGAACG
FD568679       --> ..................................................
FD570809       --> ..................................................
EX903529       --> ..................................................
EY941495       --> ..................................................
FD548321       --> ..................................................
EV550869       --> ..................................................
FD563092       --> ..................................................
EX754088       --> ..................................................
EW732569       --> AGCTTTCTATGATTTTGCTTCCATGCTAAAAACAAAGGTCGACAAGAACG

               1201   -   1251
UN13101        --> ATCCGAATGCCAGTACGACGTTAAACCGACTTGAAGCCGTTCATAAAGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD544523       <-- ATCCGAATGCCAGTACGACGTTAAACCGACTTGAAGCCGTTCATAAAGTC
EV546071       <-- ATCCGAATGCCAGTACGACGTTAAACCGACTTGAAGCCGTTCATAAAGTC
FD568679       --> ..................................................
FD570809       --> ..................................................
EX903529       --> ..................................................
EY941495       --> ..................................................
FD548321       --> ..................................................
EV550869       --> ..................................................
FD563092       --> ..................................................
EX754088       --> ..................................................
EW732569       --> ATCCGAATGCCAGTACGACGTTAAACCGACTTGAAGCCGTTCATAAAGTC

               1251   -   1301
UN13101        --> TGCAGAGACACTGGAGTCCTTCATAACAGAAAATCTTATATTAATGACAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD544523       <-- TGCAGAGACACTGGAGTCCTTCATAACAGAAAATCTTATATTAATGACAA
EV546071       <-- TGCAGAGACACTGGAGTCCTTCATAACAGAAAATCTTATATTAATGACAA
FD568679       --> ..................................................
FD570809       --> ..................................................
EX903529       --> ..................................................
EY941495       --> ..................................................
FD548321       --> ..................................................
EV550869       --> ..................................................
FD563092       --> ..................................................
EX754088       --> ..................................................
EW732569       --> TGCAGAGACACTGGAGTCCTTCATAACAGAAAATCTTATATTAATGAC..

               1301   -   1351
UN13101        --> AGGACAATCTGCCAATGTCTATATTGTAATGCTTGTGATTCTACTGGCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD544523       <-- AGGACAATCTGCCAATGTCTATATTGTAATGCTTGTGATTCTACTGGCCA
EV546071       <-- AGGACAATCTGCCAATGTCTATATTGTAATGCTTGTGATTCTACTGGCCA
FD568679       --> ..................................................
FD570809       --> ..................................................
EX903529       --> ..................................................
EY941495       --> ..................................................
FD548321       --> ..................................................
EV550869       --> ..................................................
FD563092       --> ..................................................
EX754088       --> ..................................................
EW732569       --> ..................................................

               1351   -   1401
UN13101        --> TAGTCTTTGCATATCTCAGAGCAAACTGAGTGATCAATGATGGACAGTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD544523       <-- TAGTCTTTGCATATCTCAGAGCAAACTGAGTGATCAATGATGGACAGTGT
EV546071       <-- TAGTCTTTGCATATCTCAGAGCAAACTGAGTGATCAATGATGGACAGTGT
FD568679       --> ..................................................
FD570809       --> ..................................................
EX903529       --> ..................................................
EY941495       --> ..................................................
FD548321       --> ..................................................
EV550869       --> ..................................................
FD563092       --> ..................................................
EX754088       --> ..................................................
EW732569       --> ..................................................

               1401   -   1451
UN13101        --> GATTCGTAGGTTCATTCTTATTCACGTCACTCTCTTTTTCTTAGAACTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD544523       <-- GATTCGTAGGTTCATTCTTATTCACGTCACTCTCTTTTTCTTAGAACTGA
EV546071       <-- GATTCGTAGGTTCATTCTTATTCACGTCACTCTCTTTTTCTTAGAACTGA
FD568679       --> ..................................................
FD570809       --> ..................................................
EX903529       --> ..................................................
EY941495       --> ..................................................
FD548321       --> ..................................................
EV550869       --> ..................................................
FD563092       --> ..................................................
EX754088       --> ..................................................
EW732569       --> ..................................................

               1451   -   1501
UN13101        --> AGTCCTATTCAAGATTGTTTCCAGAACAAGAAAGTTTTAAACCTGGCTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD544523       <-- AGTCCTATTCAAGATTGTTTCCAGAACAAGAAAGTTTTAAACCTGGCTTG
EV546071       <-- AGTCCTATTCAAGATTGTTTCCAGAACAAGAAAGTTTTAAACCTGGCTTG
FD568679       --> ..................................................
FD570809       --> ..................................................
EX903529       --> ..................................................
EY941495       --> ..................................................
FD548321       --> ..................................................
EV550869       --> ..................................................
FD563092       --> ..................................................
EX754088       --> ..................................................
EW732569       --> ..................................................

               1501   -   1551
UN13101        --> GTCTCTACCCATGTAGTTTGAATAATTATATACCTTTCTTAAATGTACCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD544523       <-- GTCTCTACCCATGTAGTTTGAATAATCATATACCTTTCTTAAATGTACCT
EV546071       <-- GTCTCTACCCATGTAGTTTGAATAATTATATACCTTTCTTAAATGTACCT
FD568679       --> ..................................................
FD570809       --> ..................................................
EX903529       --> ..................................................
EY941495       --> ..................................................
FD548321       --> ..................................................
EV550869       --> ..................................................
FD563092       --> ..................................................
EX754088       --> ..................................................
EW732569       --> ..................................................

               1551   -   1601
UN13101        --> CTTGTTTATGCTGACGTCAAATATATATTGCCAATGATTTTTGGTTTTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD544523       <-- CTTGTTTATGCTGACGTCAAATATATATTGCC..................
EV546071       <-- CTTGTTTATGCTGACGTCAAATATATATTGCCAATGATTTTTGGTTTTCA
FD568679       --> ..................................................
FD570809       --> ..................................................
EX903529       --> ..................................................
EY941495       --> ..................................................
FD548321       --> ..................................................
EV550869       --> ..................................................
FD563092       --> ..................................................
EX754088       --> ..................................................
EW732569       --> ..................................................

               1601   -   1651
UN13101        --> TGAATTCAAATTAAATTTCAT
                   ~~~~~~~~~~~~~~~~~~~~~
FD544523       <-- .....................
EV546071       <-- TGAATTCAAATTAAATTTCAT
FD568679       --> .....................
FD570809       --> .....................
EX903529       --> .....................
EY941495       --> .....................
FD548321       --> .....................
EV550869       --> .....................
FD563092       --> .....................
EX754088       --> .....................
EW732569       --> .....................