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Alignment for radish unigene UN13106

               1      -     51
UN13106        --> GGAATTGAAGACTCTCTGGTTTGGTATGAATCAACAGAAAACACAGAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574191       <-- ..................................................
FD974736       <-- ..................................................
EV570765       <-- ..................................................
EV570766       <-- ..................................................
EY920202       <-- ..................................................
FD977276       <-- ..................................................
EX774651       <-- ..................................................
EX768787       <-- ..................................................
FD980990       <-- ..................................................
EV569713       --> GGAATTGAAGACTTTCTGGTTTGGTATGAATCAACAGAAAACACAGAGAG
EY924573       --> ....ggGAAGACTCTCTGGTTTGGTATGAATCAACAGAAAACACAGAGAG
FD963044       --> ....ggGAAGACTCTCTGGTTTGGTATGAATCAGCAGAAAACACAGAGAG
FD962366       --> .................................ggAGAAAACACAGAGAG
FD978500       --> .................................ggAGAAAACACAGAGAG
FD981535       --> ..................................................
EV565460       --> ..................................................
EX764968       --> ..................................................
FD976790       --> ..................................................

               51     -    101
UN13106        --> AAGAAGA--GTAGCCATGGATTTCGCTTCTTGTTCGATCCTTAACAATCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574191       <-- ..................................................
FD974736       <-- ..................................................
EV570765       <-- ..................................................
EV570766       <-- ..................................................
EY920202       <-- ..................................................
FD977276       <-- ..................................................
EX774651       <-- ..................................................
EX768787       <-- ..................................................
FD980990       <-- ..................................................
EV569713       --> AAGAAGA--ATAGCCATGGATTTCGCTTCTTGTCCGATCCTTAACAATCT
EY924573       --> AAGAAGAAGGTAGCCATGGATTTCGCTTCTTGTTCGATCCTTAACAATCT
FD963044       --> AAGGAG---GTAGCCATGGATTTCGCTTCTTGTTCGATCCTTAACAATTT
FD962366       --> AAGAAG---GTAGCCATGGATTTCGCTTCTTGTTCGATCCTTAACAATCT
FD978500       --> AAGAAGAAGGTAGCCATGGATTTCGCTTCTTGTTCGATCCTTAAAAACCT
FD981535       --> ..........gAGCCATGGATTTCGCTTCTTGTTCGATCCTTAAAAACCT
EV565460       --> ..................................................
EX764968       --> ..................................................
FD976790       --> ..................................................

               101    -    151
UN13106        --> CCAGCTTTCTTCTTGCACAAAGTCTCATCCTTTCACGACTAACCTGTGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574191       <-- ..................................................
FD974736       <-- ..................................................
EV570765       <-- ..................................................
EV570766       <-- ..................................................
EY920202       <-- ..................................................
FD977276       <-- ..................................................
EX774651       <-- ..................................................
EX768787       <-- ..................................................
FD980990       <-- ..................................................
EV569713       --> CCAGCTTTCTTCTTGCACAAAGTCTCATCCTTTCACGACTAACCTGTGGT
EY924573       --> CCAGCTTTCTTCTTGCACAAAGTCTCATCCTTTCACGACTAACCTGTGGT
FD963044       --> CCAGCTTTCTTCTTGCACAAAGTCTCATCCTTTCACGACTAACCTGTGGT
FD962366       --> CCAGCTTTCTTCTTGCACAAAGTCTCATCCTTTCACGACTAACCTGTGGT
FD978500       --> CCAGCTTTCTTCTTGCACAAAGTCTCATCCTTTCACGACTAACCTGTGGT
FD981535       --> CCAGCTTTCTTCTTGCACAAAGTCTCATCCTTCCACGACTAACCTGTGGT
EV565460       --> ..................................................
EX764968       --> ..................................................
FD976790       --> ..................................................

               151    -    201
UN13106        --> CACACGACACTGGAAGAAGACGACGAAGTTCCTTGGCTTTTCTTGATTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574191       <-- ..................................................
FD974736       <-- ..................................................
EV570765       <-- ..................................................
EV570766       <-- ..................................................
EY920202       <-- ..................................................
FD977276       <-- ..................................................
EX774651       <-- ..................................................
EX768787       <-- ..................................................
FD980990       <-- ..................................................
EV569713       --> CACACGACACTGGAAGAAGACGACCAAGTTCCTTGGCTTTTCTTGATTGC
EY924573       --> CACACGACACTGGAAGAAGACGACCAAGTTCCTTGGCTTTTCTTGATTGC
FD963044       --> CACACGACACTGGAAGAAGACGACGAAGTTCCTTGGCTTTTCTTGATTGC
FD962366       --> CACACGACACTGGAAGAAGACGACGAAGTTCCTTGGCTTTTCTTGATTGC
FD978500       --> CACACGACACTGGAAGAAGACGACGAAGTTCCCTGGCTTTTCTTGATTGC
FD981535       --> CACACGACACTGGAAGAAGACGACGAAGTTCCTTGGCTTTTCTTGATTGC
EV565460       --> ..................................................
EX764968       --> ..................................................
FD976790       --> ..................................................

               201    -    251
UN13106        --> CCAGAAAGATCCCAGATTCTCGGAAAATGCCTGCGAGTGCATAGACAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574191       <-- ..................................................
FD974736       <-- ..................................................
EV570765       <-- ..................................................
EV570766       <-- ..................................................
EY920202       <-- ..................................................
FD977276       <-- ..................................................
EX774651       <-- ..................................................
EX768787       <-- ..................................................
FD980990       <-- ..................................................
EV569713       --> CCAGAAAGATCCCAGATTCTCGGAAAATGCCTGCGAGTGCATAGACAGAG
EY924573       --> CCAGAAAGATCCCAGATTCTCGGAAAATGCCTGCGAGTGCATAGACAGAG
FD963044       --> CCAGAAAGATTCCAGATTCTCGGAAAATGCCTGCGAGTGCATAGACAGAG
FD962366       --> CCAGAAAGATTCCAGATTCTCGGAAAATGCCTGCGAGTGCATAGACAGAG
FD978500       --> CCAGAAAGATCCCAGATTCTCGGAAAATGCCTGCGATTGCCGAGACAGAG
FD981535       --> CCAGAAAGATCCCAGATTCTCGGAAAATGCCTGCGATTGCCGAGACAGAG
EV565460       --> ..................................................
EX764968       --> ..................................................
FD976790       --> ..................................................

               251    -    301
UN13106        --> TTCCTCCACGCGCTGCTTATCAGCGAGCCGTGAAGATGCAAACCCATCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574191       <-- ..................................................
FD974736       <-- ..................................................
EV570765       <-- ..................................................
EV570766       <-- ..................................................
EY920202       <-- ..................................................
FD977276       <-- ..................................................
EX774651       <-- ..................................................
EX768787       <-- ..................................................
FD980990       <-- ..................................................
EV569713       --> TTCCTCCACGCGCTGCTTATCAGCGAGCCGTGAAGATGCAAACCCATCTG
EY924573       --> TTCCTCCACGCGCTGCTTATCAGCGAGCCGTGAAGATGCAAACCCATCTG
FD963044       --> TTCCTCCACGCGCTGCTTATCAGCGAGCCGTGAAGATGCAAACCCATCTG
FD962366       --> TTCCTCCACGCGCTGCTTATCAGCGAGCCGTGAAGATGCAAACCCATCTG
FD978500       --> TTCCTCCACGCGCTGCTTATCAGCGAGCCGTGAAGATGCAAACCCATCTG
FD981535       --> TTCCTCCACGCGCTGCTTATCAACGAGCCGTGAAGATGCAAACCCATCTG
EV565460       --> ..................................................
EX764968       --> ..................................................
FD976790       --> ..................................................

               301    -    351
UN13106        --> AAGAACTCGCCGTGATACTTGAGGTTGATGGGGTAATGATTGATACATGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574191       <-- ..................................................
FD974736       <-- ..................................................
EV570765       <-- ..................................................
EV570766       <-- ..................................................
EY920202       <-- ..................................................
FD977276       <-- ..................................................
EX774651       <-- ..................................................
EX768787       <-- ..................................................
FD980990       <-- ..................................................
EV569713       --> AAGAACTCGCCGTGATACTTGAGGTTGATGGGGTAATGATTGATACATGG
EY924573       --> AAGAACTCGCCGTGATACTTGAGGTTGATGGGGTAATGATTGATACATGG
FD963044       --> AAGAACTCGCCGTGATACTTGAGGTTGATGGGGTAATGATTGATACATGG
FD962366       --> AAGAACTCGCCGTGATACTTGAGTTTGATGGGGTAATGATTGATACATGG
FD978500       --> AAGAACTCGCCGTGATACTTGAGGTTGATGGGGTAATGATTGATACATGG
FD981535       --> AAGAACTCGCCGTGATACTTGAGGTTGATGGGGTAATGATTGATACATGG
EV565460       --> ..................................................
EX764968       --> ..................................................
FD976790       --> ..................................................

               351    -    401
UN13106        --> TCTAGTAATCGCCAGGCTTTCAATGTAGCTTTTAAAAAGCTTGGGCTTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574191       <-- ..................................................
FD974736       <-- ..................................................
EV570765       <-- ..................................................
EV570766       <-- ..................................................
EY920202       <-- ..................................................
FD977276       <-- ..................................................
EX774651       <-- ..................................................
EX768787       <-- ..................................................
FD980990       <-- ..................................................
EV569713       --> TCTAGTAATCGCCAGGCTTTCAATGTAGCTTTTAAAAAGCTTGGGCTTGA
EY924573       --> TCTAGTAATCGCCAGGCTTTCAATGTAGCTTTTAAAAAGCGTGGGCTTGA
FD963044       --> TCTAGTAATCGCCAGGCTTTCAATGTAGCTTTTAAAAAGCTTGGGCTTGA
FD962366       --> TCTAGTAATCGCCAGGCTTTCAATGTAGCTTTTAAAAAGCTTGGGCTTGA
FD978500       --> TCTAGTAATCGCCAGGCTTTCAATGTAGCTTTTAAAAAGCTTGGGCTTGA
FD981535       --> TCTAGTAATCGCCAGGCTTTCAATGTAGCTTTTAAAAAGCTTGGGCTTGA
EV565460       --> ..................................................
EX764968       --> ..................................................
FD976790       --> ..................................................

               401    -    451
UN13106        --> CTGTGCTAATTGGCCTGAACCAGTTTATGCCGACCTGTTGAGAAAAGGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574191       <-- ..................................................
FD974736       <-- ..................................................
EV570765       <-- ..................................................
EV570766       <-- ..................................................
EY920202       <-- ..................................................
FD977276       <-- ..................................................
EX774651       <-- ..................................................
EX768787       <-- ..................................................
FD980990       <-- ..................................................
EV569713       --> CTGTGCTAACTGGTCTGAACCAGTTTATGCAGACCTGTTGAGAAAAGGTG
EY924573       --> CTGTGCTAACTGGCCTGAACCAGTTTATGCAGACCTGTTGAGAAAAGGTG
FD963044       --> CTGTGCTAATTGGCCTGAACCAGTTTATGCCGACCTGTTGAGAAAAGGTG
FD962366       --> CTGTGCTAATTGGCCTGAACCAGTTTATGCCGACCTGTTGAGAAAAGGTG
FD978500       --> CTGTGCTAATTGGCCTGAACCAGTTTATGCCGACCTGTTGAGAAAAGGTG
FD981535       --> CTGTGCTAATTGGCCTGAACCAGTTTATGTCGACCTGTTGAGAAAAGGTG
EV565460       --> ..................................................
EX764968       --> ..................................................
FD976790       --> ..................................................

               451    -    501
UN13106        --> CTGCTGATGAAGAGAAAATGTTGGTTTTGTATTTCAACCAGATTGGATGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574191       <-- ..................................................
FD974736       <-- ..................................................
EV570765       <-- ..................................................
EV570766       <-- ..................................................
EY920202       <-- ..................................................
FD977276       <-- ..................................................
EX774651       <-- ..................................................
EX768787       <-- ..................................................
FD980990       <-- ..................................................
EV569713       --> CTGCTGATGAAGAGAAAATGTTGGTTTTGTATTTCAACCAGATTGGATGG
EY924573       --> CTGCTGATGAAGAGAAAATGTTGGTTTTGTATTTCAACCAGATTGGATGG
FD963044       --> CTGCTGATGAAGAGAAAATGTTGGTTTTGTATTTCAACCAGATTGGATGG
FD962366       --> CTGCTGATGAAGAGAAAATGTTGGTTTTGTAT..................
FD978500       --> CTGCTGATGAAGAGAAAATGTTGGTTTTGTATTTCAACCAGATTGGATGG
FD981535       --> CTGCTGATGAAGAGAAAATGTTGGTTTTGTATTTCAACCAGATTGGATGG
EV565460       --> ..................................................
EX764968       --> ..................................................
FD976790       --> ..................................................

               501    -    551
UN13106        --> CCTTCCTCCTTGCCAACCAATGAGAAAGGGACTTTTGTAAAAAGTGTATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574191       <-- ..................................................
FD974736       <-- ..................................................
EV570765       <-- ..................................................
EV570766       <-- ..................................................
EY920202       <-- ..................................................
FD977276       <-- ..................................................
EX774651       <-- ..................................................
EX768787       <-- ..................................................
FD980990       <-- ..................................................
EV569713       --> CCTTCCTCCTTGCCAACCAATGAGAAAGGGACTTTTGTAAAAAGTGTATT
EY924573       --> CCTTCCTCCTTGCCAACCAATGAGAAAGGGACTTTTGTAAAAAGTGTATT
FD963044       --> CCTTCCTCCTTGCCAACCAATGAGAAAGGGACTTTTGTAAAAAGTGTATT
FD962366       --> ..................................................
FD978500       --> CCTTCCTCCTTGCCAACCAATGAGAAAGGGACTTTTGTAAAAAGTGTATT
FD981535       --> CCTTCCTCCTTGCCAACCAATGAGAAAGGGACTTTTGTAAAAAGTGTATT
EV565460       --> ..................................................
EX764968       --> ..................................................
FD976790       --> ..................................................

               551    -    601
UN13106        --> GCGAGAAAAGAAAAATGCCATGGATGAGTTTCTGATGTCGAAAAGCTTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574191       <-- ..GAGAAAAGAAAAATGCCATGGATGAGTTTCTGATGTCCAAAAGCTTAC  Raphanus raphanistrum subsp. landra
FD974736       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV570765       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV570766       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY920202       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD977276       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX774651       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX768787       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD980990       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV569713       --> GCGAGAAAAGAAAAATGCCATGGATGAGTTTCTGATGTCCAAAAGCTTAC  Raphanus raphanistrum subsp. landra
EY924573       --> GCGAGAAAAGAAAAATGCCATGGATGAGTTTCTGATGTCCAAAAGCTTAC  Raphanus raphanistrum subsp. landra
FD963044       --> GCGAGAAAAGAAAAATGCCATGGATGAGTTTCTGATGTCGAAAAGCTTAC  Raphanus raphanistrum subsp. maritimus
FD962366       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD978500       --> GCGAGAAAAGAAAAATGCCATGGATGAGTTTCTGATGTCGAAAAGCTTAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD981535       --> GCGAGAAAAGAAAAATGCCATGGATGAGTTTCTGATGTCGAAAAGCTTAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV565460       --> ..................................................  Raphanus raphanistrum subsp. landra
EX764968       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD976790       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               601    -    651
UN13106        --> CTCTCAGATCTGGAGTCCAAGAGTTTATCGATAATGCATACACGGAGAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574191       <-- CTCTCAGATCTGGAGTCCAAGAGTTTATCGATAATGCATACACGGAGAAA  Raphanus raphanistrum subsp. landra
FD974736       <-- ..CTCAGATCTGGAGTCCAAGAGTTTATCGATAATGCATACACTGAGAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV570765       <-- ..........gGGAGTCCAAGAGTTTATCGATAATGCATACACGGAGAAA  Raphanus raphanistrum subsp. landra
EV570766       <-- ..........gGGAGTCCAAGAGTTTATCGATAATGCATACACGGAGAAA  Raphanus raphanistrum subsp. landra
EY920202       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD977276       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX774651       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX768787       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD980990       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV569713       --> CTCTCAGATCTGGAGTCCAAGAGTTTATCGATAATGCATACACGGAGAAA  Raphanus raphanistrum subsp. landra
EY924573       --> CTCTCAGATCTGGAGTCCAAGAGTTTATCGATAATGCATACACGGAGAAA  Raphanus raphanistrum subsp. landra
FD963044       --> CTCTCAGATCTGGAGTCCAAGAGTTTATCGATAATGCACACACTGAGAAA  Raphanus raphanistrum subsp. maritimus
FD962366       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD978500       --> CTCTCAGATCTGGAGTCCAAGAGTTTATCGATAATGCATACACTGAGAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD981535       --> CTCTCAGATCTGGAGTCCAAGAGTTTATCGATAATGCATACACTGAGAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV565460       --> ..........gGGAGTCCAAGAGTTTATCGATAATGCATACACGGAGAAA  Raphanus raphanistrum subsp. landra
EX764968       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD976790       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               651    -    701
UN13106        --> GTACCCGTTGCTATCGCAACAGCCTACTTCAAGAGTGGAGACAAAGTAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574191       <-- GTACCCGTTGCTATCGCAACAGCCTACTTCAAGAGTGGAGACAAAGTAGC  Raphanus raphanistrum subsp. landra
FD974736       <-- GTACCCGTTGCTATCGTAACAGCCTACTTCAAGAGTGGAGACAAAGTAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV570765       <-- GTACCCGTTGCTATCGCAACAGCCTACTTCAAGAGTGGAGACAAAGTAGC  Raphanus raphanistrum subsp. landra
EV570766       <-- GTACCCGTTGCTATCGCAACAGCCTACTTCAAGAGTGGAGACAAAGTAGC  Raphanus raphanistrum subsp. landra
EY920202       <-- ...........................TTCAAGAGTGGAGACAAAGTAGC  Raphanus raphanistrum subsp. landra
FD977276       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX774651       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX768787       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD980990       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV569713       --> GTACCCGTTGCTATCGCAACAGCCTACTTCAAGAGTGGAGACAAAGTAGC  Raphanus raphanistrum subsp. landra
EY924573       --> GTACCCGTTGCTATCGCAACAGCCTACTTCA-GAGTGGAGACAAAGTAGC  Raphanus raphanistrum subsp. landra
FD963044       --> GTACCCGTTGCTATCGTAACAGCCTACTTCAAGAGTGGAGACAAAGTAGC  Raphanus raphanistrum subsp. maritimus
FD962366       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD978500       --> GTACCCGTTGCTATCGTAACAGCCTACTTCAAGAGTGGAGACAAAGTAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD981535       --> GTACCCGTTGCTATCGTAACAGCCTACTTCAAGAGTGGAGACAAAGTAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV565460       --> GTACCCGTTGCTATCGCAACAGCCTACTTCAAGAGTGGAGACAAAGTAGC  Raphanus raphanistrum subsp. landra
EX764968       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD976790       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               701    -    751
UN13106        --> CTTATCCATTGTGGAGATGCTTGGCGAAGAAAGACTTCCCAGTGTGAAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574191       <-- CTTATCCATTGTGGAGATGCTTGGCGAAGAAAGACTTCCCAGTGTGAAGG  Raphanus raphanistrum subsp. landra
FD974736       <-- CTTATCCATTGTGGAGATGCTTGGCGAAGAAAGACTTCCCAATGTGAAGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV570765       <-- CGTATCCATTGTGGAGATGCTTGGCGAAGAAAGACTTCCCAGTGTGAAGG  Raphanus raphanistrum subsp. landra
EV570766       <-- CGTATCCATTGTGGAGATGCTTGGCGAAGAAAGACTTCCCAGTGTGAAGG  Raphanus raphanistrum subsp. landra
EY920202       <-- CTTATCCATTGTGGAGATGCTTGGCGAAGAAAGACTTCCCAGTGTGAAGG  Raphanus raphanistrum subsp. landra
FD977276       <-- ...ATCCATTGTGGAGATGCTTGGCGAAGAAAGACTTCCCAATGTGAAGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX774651       <-- ......CATTGTGGAGATGCTTGGCGAAGAAAGACTTCCCAGTGTGAAGG  Raphanus raphanistrum subsp. landra
EX768787       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD980990       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV569713       --> CTTATCCATTGTGGAGATGCTTGGCGAAGAAAGACTTCCCAGTGTGAAG-  Raphanus raphanistrum subsp. landra
EY924573       --> CTTATCCATTGTGGAGATGCTTGGCGAAGAAAGACTTCCCAGTGTGAAGG  Raphanus raphanistrum subsp. landra
FD963044       --> TTTAT.............................................  Raphanus raphanistrum subsp. maritimus
FD962366       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD978500       --> CTTATCCATTGTGGAGATGCTTGGCGAAGAA-GACTTCCCAATGTGA...  Raphanus raphanistrum subsp. raphanistrum (NY)
FD981535       --> CTTATCCATTGTGGAGATGCTTGGCGAAGAAAGACTTCCCAATGTGAAG-  Raphanus raphanistrum subsp. raphanistrum (NY)
EV565460       --> CGTATCCATTGTGGAGATGCTTGGCGAAGAAAGACTTCCCAGTGTGAAGG  Raphanus raphanistrum subsp. landra
EX764968       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD976790       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               751    -    801
UN13106        --> TTATTGGAGACAGTGAGGTGGAACAGAGTATGTATGGACAACTTGTTCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574191       <-- TTATTGGAGACAGTGAGGTGGAACAGAGTATGTATGGACGACTTGTTCTT
FD974736       <-- TTATTGGAGACAGTGAGGTGGAACAGAGTATGTATGGACAACTTGTTCTT
EV570765       <-- TTATTGGAGACAGTGAGGTGGAACAGAGTATGTATGGACAACTTGTTCTT
EV570766       <-- TTATTGGAGACAGTGAGGTGGAACAGAGTATGTATGGACAACTTGTTCTT
EY920202       <-- TTATTGGAGACAGTGAGGTGGAACAGAGTATGTATGGACAACTTGTTCTT
FD977276       <-- TTATTGGAGACAGTGAGGTGGAACAGAGTATGTATGGACAACTTGTTCTT
EX774651       <-- TTATTGGAGACAGTGAGGTGGAACAGAGTATGTATGGACAACTTGTTCTT
EX768787       <-- ..................................................
FD980990       <-- ..................................................
EV569713       --> TTATTGGAGACAGTGAG-TGGAACAGAGTATGTATGGACGACTTGTTCT.
EY924573       --> TTATTGGAGACAGTGAG-TGGAACAGAGTATGTATGGACAc.........
FD963044       --> ..................................................
FD962366       --> ..................................................
FD978500       --> ..................................................
FD981535       --> TTATTGGAGACAGTGAG-TGGAACAGAGTATGTATGGACAACTTGTTCTT
EV565460       --> TTATTGGAGACAGTGAGGTGGAACAGAGTATGTATGGACAACTTGTTCTT
EX764968       --> ..................................................
FD976790       --> ..................................................

               801    -    851
UN13106        --> GGCAAAGGAGTTTCTTCAAGTCTAGAGGAGCAACTAGTCAAGGAAGTCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574191       <-- GGCAAAGGAGTTTCTTCAAGTCTAGAGGAGCAACTAGTCAAGGAAGTCAA
FD974736       <-- GGCAAAGGAGTTTCTTCAAGTGTAGAGGACCAATTAGTCAAGGAAGTCAA
EV570765       <-- GGCAAAGGAGTTTCTTCAAGTCTAGAGGAGCAACTAGTCAAGGAAGTCAA
EV570766       <-- GGCAAAGGAGTTTCTTCAAGTCTAGAGGAGCAACTAGTCAAGGAAGTCAA
EY920202       <-- GGCAAAGGAGTTTCTTCAAGTCTAGAGGAGCAACTAGTCAAGGAAGTCAA
FD977276       <-- GGCAAAGGAGTTTCTTCAAGTGTAGAGGACCAACTAGTCAAGGAAGTCAA
EX774651       <-- GGCAAAGGAGTTTCTTCAAGTCTAGAGGAGCAACTAGTCAAGGAAGTCAA
EX768787       <-- ..................................................
FD980990       <-- ..................................................
EV569713       --> ..................................................
EY924573       --> ..................................................
FD963044       --> ..................................................
FD962366       --> ..................................................
FD978500       --> ..................................................
FD981535       --> GGCAAAG-AGTTTCTTCAAGTgta..........................
EV565460       --> GGCAAAGGAGTTTCTTCAAGTCTAGAGGAGCAACTAGTCAAGGAAGTCAA
EX764968       --> ..................................................
FD976790       --> ..................................................

               851    -    901
UN13106        --> AAAAGCAGCATCCGCTGAGAAACAGAGGATAGCAGAAGAAGTTGCATCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574191       <-- AAAAGCAGCATCCGCTGAGAAACAGAGGATAGCAGAAGAAGTTGCATCGA
FD974736       <-- AAAAGCAGCATCCGCTGAGAAACAGAGGATAGCTGAAGAAGTTGCATTGA
EV570765       <-- AAAAGCAGCATCCGCTGAGAAACAGAGGATAGCAGAAGAAGTTGCATCGA
EV570766       <-- AAAAGCAGCATCCGCTGAGAAACAGAGGATAGCAGAAGAAGTTGCATCGA
EY920202       <-- AAAAGCAGCATCCGCTGAGAAACAGAGGATAGCAGAAGAAGTTGCATCGA
FD977276       <-- AAAAGCAGCATCCGCTGAGAAACAGAGGATAGCTGAAGAAGTTGCATCGA
EX774651       <-- AAAAGCAGCATCCGCTGAGAGACAGAGGATAGCAGAAGAAGTTGCATCGA
EX768787       <-- ..................................................
FD980990       <-- ..................................................
EV569713       --> ..................................................
EY924573       --> ..................................................
FD963044       --> ..................................................
FD962366       --> ..................................................
FD978500       --> ..................................................
FD981535       --> ..................................................
EV565460       --> AAAAGCAGCATCCGCTGAGAAACAGAGGATAGCAGAAGAAGTTGCATCGA
EX764968       --> ..................................................
FD976790       --> ..................................................

               901    -    951
UN13106        --> TGCTAAAGCTTAGTGTGGACATTGACACAAGCTCATCTGAGAGATTGGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574191       <-- TGCTAAAGCTTAGTGTGGACATTGACACAAGCTCATCTGAGAGATTGGAG
FD974736       <-- TGCTAAAGCTTAGTGTGGACATTGACACAAGCTCATTTGAGAGATTGGAG
EV570765       <-- TGCTAAAGCTTAGTGTGGACATTGACACAAGCTCATCTGAGAGATTGGAG
EV570766       <-- TGCTAAAGCTTAGTGTGGACATTGACACAAGCTCATCTGAGAGATTGGAG
EY920202       <-- TGCTAAAGCTTAGTGTGGACATTGACACAAGCTCATCTGAGAGATTGGAG
FD977276       <-- TGCTAAAGCTTAGTGTGGACATTGACACAAGCTCATTTGAGAGATTGGAG
EX774651       <-- TGCTAAAGCTTAGTGTGGACATTGACACAAGCTCATCTGAGAGATTGGAG
EX768787       <-- ..............................GCTCATCTGAGAGATTGGAG
FD980990       <-- ..................................................
EV569713       --> ..................................................
EY924573       --> ..................................................
FD963044       --> ..................................................
FD962366       --> ..................................................
FD978500       --> ..................................................
FD981535       --> ..................................................
EV565460       --> TGCTAAAGCTTAGTGTGGACATTGACACAAGCTCATCTGAGAGATTGGAG
EX764968       --> ..............................GCTCATCTGAGAGATTGGAG
FD976790       --> ..................................................

               951    -   1001
UN13106        --> AAAATTGTGGTTGCATTGCGTGCTGCTGCAGAGTATACTGGATTACCTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574191       <-- AAAATTGTGGTTGCATTGCGTGCTGCTGCAGAGTATACTGGATTACCTGT
FD974736       <-- AAAATTGTGGTTGCATTGCGTGCTGCTGCAGAGTATACTGGATTACCCGT
EV570765       <-- AAAATTGTGGTTGCATTGCGTGCTGCTGCAGAGTATACTGGATTACCTGT
EV570766       <-- AAAATTGTGGTTGCATTGCGTGCTGCTGCAGAGTATACTGGATTACCTGT
EY920202       <-- AAAATTGTGGTTGCATTGCGTGCTGCTGCAGAGTATACTGGATTACCTGT
FD977276       <-- AAAATTTTGGTCGCATTGCGTGCTGCTGCAGAGTATACTGGATTACCCGT
EX774651       <-- AAAATTGTGGTTGCATTGCGTGCTGCCGCAGAGTATACTGGATTACCTGT
EX768787       <-- AAAATTGTGG-----TTGCGTGCTGCTGCAGAGTATACTGGGTTACCTGT
FD980990       <-- ..................................................
EV569713       --> ..................................................
EY924573       --> ..................................................
FD963044       --> ..................................................
FD962366       --> ..................................................
FD978500       --> ..................................................
FD981535       --> ..................................................
EV565460       --> AAAATTGTGGTTGCATTGCGTGCTGCTGCAGAGTATACTGGATTACCTGT
EX764968       --> AAAATTGTGGTTGC-----GTGCTGCTGCAGAGTATACTGGGTTACCTGT
FD976790       --> ..................................................

               1001   -   1051
UN13106        --> TAGAAACTGTGTACTTGTTGCTGGTAGTCAATCTGGAGTTTCTGCTGCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574191       <-- TAGAAACTGTGTACTTGTTGCTGGTAGTCAATCTGGAGTTTCTGCTGCAA
FD974736       <-- TAGAGACTGTGTACTTGTTGCTGGTAGTCAATCTGGAGTTTCTGCTGCAA
EV570765       <-- ---TAACTGTGTACTTGTTGCTGGTAGTCAATCTGGAGTTTCTGCTGCAA
EV570766       <-- ---TAACTGTGTACTTGTTGCTGGTAGTCAATCTGGAGTTTCTGCTGCAA
EY920202       <-- TAGAAACTGTGTACTTGTTGCTGGTAGTCAATCTGGAGTTTTTGCTGCAA
FD977276       <-- TAGAAACTGTGTACTTGTTGCTGGTAGTCAATCTGGAGTTTTTGCTGCAA
EX774651       <-- TAGAAACTGTGTACTTGTTGCTGGTAGTCAATCTGGAGTTTCTGCTGCAA
EX768787       <-- TAGAAACTGTGTACTTGTTGCTGGTAGTCAATCTGGAGTTTCTGCTGCAA
FD980990       <-- ..................................................
EV569713       --> ..................................................
EY924573       --> ..................................................
FD963044       --> ..................................................
FD962366       --> ..................................................
FD978500       --> ..................................................
FD981535       --> ..................................................
EV565460       --> TA---ACTGTGTACTTGTTGCTGGTAGTCAATCTGGAGTTTCTGCTGCAA
EX764968       --> TAGAAACTGTGTACTTGTTGCTGGTAGTCAATCTGGAGTTTCTGCTGCAA
FD976790       --> ..................................................

               1051   -   1101
UN13106        --> AGATGATAGGCATGCCTTGTGTAGTCATGAGAAGCAGTTTAACTGCAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574191       <-- AGATGATAGGCATGCCTTGTGTAGTCATGAGAAGCAGTTTAACTGCAAGA
FD974736       <-- AGATGATAGGCATGCCTTGTGTAGTCATGAGAAGCAGTTTAACTGCAAGA
EV570765       <-- AGATGATAGGCATGCCTTGTGTAGTCATGAGAAGCAGTTTAACTGCAAGA
EV570766       <-- AGATGATAGGCATGCCTTGTGTAGTCATGAGAAGCAGTTTAACTGCAAGA
EY920202       <-- AGATGATAGGCATGCCTTGTGTAGTCATGAGAAGCAGTTTAACTGCAAGA
FD977276       <-- AGATGATAGGCATGCCTTGTGTAGTCATGAGAAGCAGTTTAACTGCAAGA
EX774651       <-- AGATGATAGGCATGCCTTGTGTAGTCATGAGAAGCAGTTTAACTGCAAGA
EX768787       <-- AGATGATAGGCATGCCTTGTGTAGTCATGAGAAGCAGTTTGACTGCAAGG
FD980990       <-- ..................................................
EV569713       --> ..................................................
EY924573       --> ..................................................
FD963044       --> ..................................................
FD962366       --> ..................................................
FD978500       --> ..................................................
FD981535       --> ..................................................
EV565460       --> AGATGATAGGCATGCCTTGTGTAGTCATGAGAAGCAGTTTAACTGCAAGA
EX764968       --> AGATGATAGGCATGCCTTGTGTAGTCATGAGAAGCAGTTTGACTGCAAGG
FD976790       --> ..................................................

               1101   -   1151
UN13106        --> GGTGAGTTTCCATCAGCAAAAGGTGTAATGGATGGATTTGGAGGTGCAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574191       <-- GGTGAGTTTCCATCAGCAAAAGGTGTAATGGATGGATTTGGAGGTGCAGA
FD974736       <-- GGTGAGTTTCCATCAGCAAAAGGTGTAATGGATGGATTTGGAGGTGCAGA
EV570765       <-- GGTGAGTTTCCATCAGCAAAAGGTGTAATGGATGGATTTGGAGGTGCAGA
EV570766       <-- GGTGAGTTTCCATCAGCAAAAGGTGTAATGGATGGATTTGGAGGTGCAGA
EY920202       <-- GGTGAGTTTCCATCAGCAAAAGGTGTAGTGGATGGATTTGGAGGTGCAGA
FD977276       <-- GGTGAGTTTCCATCAGCAAAAGGTGTAATGGATGGATTTGGAGGTGCAGA
EX774651       <-- GGTGAGTTTCCATCAGCAAAAGGTGTAATGGATGGATTTGGAGGTGCAGA
EX768787       <-- GGTGAGTTTCCATCAGCAAAAGGTGTAATGGATGGTTTTGGAGGTGCAGA
FD980990       <-- ..................................................
EV569713       --> ..................................................
EY924573       --> ..................................................
FD963044       --> ..................................................
FD962366       --> ..................................................
FD978500       --> ..................................................
FD981535       --> ..................................................
EV565460       --> GGTGAGTTTCCATCAGCAAAAGGTGTAATGGATGGATTTGGAGGTGCAGA
EX764968       --> GGTGAGTTTCCATCAGCAAAAGGTGTAATGGATGGTTTTGGAGGTGCAGA
FD976790       --> ..................................................

               1151   -   1201
UN13106        --> CTTGACCATTCAAAAACTTAGGCACAAGATCAAGCCTTGAAGAAACAATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574191       <-- CTTGACCATTCAAAAACTTAGGCACAAGATCAAGCCTTGAAGAAACAATT
FD974736       <-- CTTGACCATTCAAAAACTTAGGCACAAGATCAAGCCTTGAAGAAACAATT
EV570765       <-- CTTGACCATTCAAAAACTTAGGCACAAGATCAAGCCTTGAAGAAACAATT
EV570766       <-- CTTGACCATTCAAAAACTTAGGCACAAGATCAAGCCTTGAAGAAACAATT
EY920202       <-- CTTGACCATTCAAAAACTTAGGCACAAGATCAAGCCTTGAAGAAACAATT
FD977276       <-- CTTGACCATTCAAAAACTTAGGCACAAGATCAAGCCTTGAAGAAACAATT
EX774651       <-- CTTGACCATTCAAAAACTTAGGCACAAGATCAAGCCTTGAAGAAACAATT
EX768787       <-- CTTGACCATTCAAAAACTTAGGCACAAGATCAAGCCTTGAAGAAATAATT
FD980990       <-- ..................................................
EV569713       --> ..................................................
EY924573       --> ..................................................
FD963044       --> ..................................................
FD962366       --> ..................................................
FD978500       --> ..................................................
FD981535       --> ..................................................
EV565460       --> CTTGACCATTCAAAAACTTAGGCACAAGATCAAGCCTTGAAGAAACAATT
EX764968       --> CTTGACCATTCAAAAACTTAGGCACAAGATCAAGCCTTGAAGAAATAATT
FD976790       --> ..................................................

               1201   -   1251
UN13106        --> TCAAGAAAGCCGTCTCAGAGTGTGTTTGTTTATTTCTGGTGAAGTTTTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574191       <-- TCAAGAAAGCCGTCTCAGAGTGTGTTTGTTTATTTCTGGTGAAGTTTTCA
FD974736       <-- TCAAGAAAGCCGTCTCAGAGTGTGTTTGTTTATTTCTGGTGAAGTTTTCA
EV570765       <-- TCAAGAAAGCCGTCTCAGAGTGTGTTTGTTTATTTCTGGTGAAGTTTTCA
EV570766       <-- TCAAGAAAGCCGTCTCAGAGTGTGTTTGTTTATTTCTGGTGAAGTTTTCA
EY920202       <-- TCAAGAAAGCCGTCTCAGAGCGTGTTTGTTTATTTCTGGTGAAGTTTTCA
FD977276       <-- TCAAGAAAGCCGTTTCAGAGTGTGTTTGTTTATTTCTGGTGAAGTTTTCA
EX774651       <-- TCAAGAAAGCCGTCTCAGAGTGTGTTTGTTTATTTCTGGTGAAGTTTTCA
EX768787       <-- TCAAGAAAGCCGTCTCAGAGTGTGTTTGTTTATTTCTGGTGAAGTTTTCA
FD980990       <-- ..................................................
EV569713       --> ..................................................
EY924573       --> ..................................................
FD963044       --> ..................................................
FD962366       --> ..................................................
FD978500       --> ..................................................
FD981535       --> ..................................................
EV565460       --> TCAAGAAAGCCGTCTCAGAGTGTGTTTGTTTATTTCTGGTGAAGTTTTCA
EX764968       --> TCAAGAAAGCCGTCTCAGAGTGTGTTTGTTTATTTCTGGTGAAGTTTTCA
FD976790       --> ..................................................

               1251   -   1301
UN13106        --> GGTTGATGATATTTTATCTGTTGCTACATGCTGTAACATATTTGATTCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574191       <-- GGTTGATGATATTTTATCTGTTGCTACATGCTGTAACATATTTGATTCTT
FD974736       <-- GGTTGATGATATTTTATCTGTTGCTACATGCTGTAACATATTTGATTCTT
EV570765       <-- GGTTGATGATATTTTATCTGTTGCTACATGCTGTAACATATTTGATTCTT
EV570766       <-- GGTTGATGATATTTTATCTGTTGCTACATGCTGTAACATATTTGATTCTT
EY920202       <-- GGTTGATGATATTTTATCTGTTGCTACATGCTGTAACATATTTGATTCTT
FD977276       <-- GGTTGATGATATTTTATCTGTTGCTACATGCTGTAACATATTTGATTCTT
EX774651       <-- GGTTGATGATATTTTATCTGTTTCTACATGCTGTAACATATTTGATTCTT
EX768787       <-- GGTTGATGATATTTTATCTATTGCTACATGCTGTAACATATTTGATTCTT
FD980990       <-- ..................................................
EV569713       --> ..................................................
EY924573       --> ..................................................
FD963044       --> ..................................................
FD962366       --> ..................................................
FD978500       --> ..................................................
FD981535       --> ..................................................
EV565460       --> GGTTGATGATATTTTATCTGTTGCTACATGCTGTAACATATTTGATTCTT
EX764968       --> GGTTGATGATATTTTATCTATTGCTACATGCTGTAACATATTTGATTCTT
FD976790       --> ..................................................

               1301   -   1351
UN13106        --> TGTAATGTACTTTTTTGATTAGTTTTCTCAAAAACTAATGTCTATTTTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574191       <-- TGTAATGTACTTTTTTGATTAGTTTTCcc.....................
FD974736       <-- TGTAATGTACTTTTTTGACTAGTTTTCTCAAAAACTAATGTC........
EV570765       <-- TGTAATGTACTTTTTTGATTAGTTTTCTC.....................
EV570766       <-- TGTAATGTACTTTTTTGATTAGTTTTCTC.....................
EY920202       <-- TGTAATGTACTTTTTTGATTAGTTTTCTCAAAAACTAATGTCTATTct..
FD977276       <-- TGTAATGTACTTTTTTGATTAGTTTTCTC.....................
EX774651       <-- TGTAATGTACTTTTTTGATTAGTTTTCTCAAAAACTAATGTCTATTTTAT
EX768787       <-- TGTAATGTACTTTTT-GATTAGTTTTCTCAAAAACTAATGTC........
FD980990       <-- ..................................................
EV569713       --> ..................................................
EY924573       --> ..................................................
FD963044       --> ..................................................
FD962366       --> ..................................................
FD978500       --> ..................................................
FD981535       --> ..................................................
EV565460       --> TGTAATGTACTTTTTTGATTAGTTTTCTC.....................
EX764968       --> TGTAATGTACTTTTT-GATTAGTTTTCTCAAAAACTAATGTC........
FD976790       --> ..................................................

               1351   -   1401
UN13106        --> ATTCCAACGCTCTACGAACCTTTTTCTTGTCTAGCCTAAGAAGAAAACCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574191       <-- ..................................................
FD974736       <-- ..................................................
EV570765       <-- ..................................................
EV570766       <-- ..................................................
EY920202       <-- ..................................................
FD977276       <-- ..................................................
EX774651       <-- ATTCCAACGCTCTACGAACCTTTTTCTTGTCTAGCCTAAGAAGAAAACCA
EX768787       <-- ..................................................
FD980990       <-- ..................................................
EV569713       --> ..................................................
EY924573       --> ..................................................
FD963044       --> ..................................................
FD962366       --> ..................................................
FD978500       --> ..................................................
FD981535       --> ..................................................
EV565460       --> ..................................................
EX764968       --> ..................................................
FD976790       --> ..................................................

               1401   -   1451
UN13106        --> GAGAATTCACAAAATGAGCTTCAAGGAAACATAAGTTGGTTATATAGCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574191       <-- ..................................................
FD974736       <-- ..................................................
EV570765       <-- ..................................................
EV570766       <-- ..................................................
EY920202       <-- ..................................................
FD977276       <-- ..................................................
EX774651       <-- GAGAATTCACAAAATGAGCTTCAAGGAAACATAAGTTGGTTATATAGCTA
EX768787       <-- ..................................................
FD980990       <-- .....................CAAGGAAACATAAGTTGGTTATATAGCTA
EV569713       --> ..................................................
EY924573       --> ..................................................
FD963044       --> ..................................................
FD962366       --> ..................................................
FD978500       --> ..................................................
FD981535       --> ..................................................
EV565460       --> ..................................................
EX764968       --> ..................................................
FD976790       --> .....................CAAGGAAACATAAGTTGGTTATATAGCTA

               1451   -   1501
UN13106        --> ACCAAGATTTTAAAAACTTCAGTTACTTCTTCAAGGTTTTATTTTGACAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574191       <-- ..................................................
FD974736       <-- ..................................................
EV570765       <-- ..................................................
EV570766       <-- ..................................................
EY920202       <-- ..................................................
FD977276       <-- ..................................................
EX774651       <-- ACCAAGATTTTAAAAACTcc..............................
EX768787       <-- ..................................................
FD980990       <-- ACCAAGATTTTAAAAACTTCAGTTACTTCTTCAAGGTTTTATTTTGACAT
EV569713       --> ..................................................
EY924573       --> ..................................................
FD963044       --> ..................................................
FD962366       --> ..................................................
FD978500       --> ..................................................
FD981535       --> ..................................................
EV565460       --> ..................................................
EX764968       --> ..................................................
FD976790       --> ACCAAGATTTTAAAAACTTCAGTTACTTCTTCAAGGTTTTATTTTGACAT

               1501   -   1551
UN13106        --> GATTCCGTTTCCAAGTCGAGACATCACCTATTTATACAGACACATACTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574191       <-- ..................................................
FD974736       <-- ..................................................
EV570765       <-- ..................................................
EV570766       <-- ..................................................
EY920202       <-- ..................................................
FD977276       <-- ..................................................
EX774651       <-- ..................................................
EX768787       <-- ..................................................
FD980990       <-- GATTCCGTTTCCAAGTCGAGACATCACCTATTTATACAGACACATACTCT
EV569713       --> ..................................................
EY924573       --> ..................................................
FD963044       --> ..................................................
FD962366       --> ..................................................
FD978500       --> ..................................................
FD981535       --> ..................................................
EV565460       --> ..................................................
EX764968       --> ..................................................
FD976790       --> GATTCCGTTTCCAAGTCGAGACATCACCTATTTATACAGACACATACTCT

               1551   -   1601
UN13106        --> TCCATGGTAAATCTTTCACTTCTAAGTTGGTTTACATTTCAGTAATCTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574191       <-- ..................................................
FD974736       <-- ..................................................
EV570765       <-- ..................................................
EV570766       <-- ..................................................
EY920202       <-- ..................................................
FD977276       <-- ..................................................
EX774651       <-- ..................................................
EX768787       <-- ..................................................
FD980990       <-- TCCATGGTAAATCTTTCACTTCTAAGTTGGTTTACATTTCAGTAATCTCT
EV569713       --> ..................................................
EY924573       --> ..................................................
FD963044       --> ..................................................
FD962366       --> ..................................................
FD978500       --> ..................................................
FD981535       --> ..................................................
EV565460       --> ..................................................
EX764968       --> ..................................................
FD976790       --> TCCATGGTAAATCTTTCACTTCTAAGTTGGTTTACATTTCAGTAATCTCT

               1601   -   1651
UN13106        --> GTTTCTCGTACGTTGCTGGTGTTTCGTCTCTGAACCGGAGCAGGGCTCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574191       <-- ..................................................
FD974736       <-- ..................................................
EV570765       <-- ..................................................
EV570766       <-- ..................................................
EY920202       <-- ..................................................
FD977276       <-- ..................................................
EX774651       <-- ..................................................
EX768787       <-- ..................................................
FD980990       <-- GTTTCTCGTACGTTGCTGGTGTTTCGTCTCTGAACCGGAGCAGGGCTCGA
EV569713       --> ..................................................
EY924573       --> ..................................................
FD963044       --> ..................................................
FD962366       --> ..................................................
FD978500       --> ..................................................
FD981535       --> ..................................................
EV565460       --> ..................................................
EX764968       --> ..................................................
FD976790       --> GTTTCTCGTACGTTGCTGGTGTTTCGTCTCTGAACCGGAGCAGGGCTCGA

               1651   -   1701
UN13106        --> GTATTCTGCATCATCATCAGCCAATGATGATATGTTTGATGAGACAGATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574191       <-- ..................................................
FD974736       <-- ..................................................
EV570765       <-- ..................................................
EV570766       <-- ..................................................
EY920202       <-- ..................................................
FD977276       <-- ..................................................
EX774651       <-- ..................................................
EX768787       <-- ..................................................
FD980990       <-- GTATTCTGCATCATCATCAGCCAATGATGATATGTTTGATGAGACAGATT
EV569713       --> ..................................................
EY924573       --> ..................................................
FD963044       --> ..................................................
FD962366       --> ..................................................
FD978500       --> ..................................................
FD981535       --> ..................................................
EV565460       --> ..................................................
EX764968       --> ..................................................
FD976790       --> GTATTCTGCATCATCATCAGCCAATGATGATATGTTTGATGAGACAGATT

               1701   -   1751
UN13106        --> CAGCTACTGTGTTTGAGACGGAGTGTGAGGGAGATTGGTGTCTGTAGCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574191       <-- ..................................................
FD974736       <-- ..................................................
EV570765       <-- ..................................................
EV570766       <-- ..................................................
EY920202       <-- ..................................................
FD977276       <-- ..................................................
EX774651       <-- ..................................................
EX768787       <-- ..................................................
FD980990       <-- CAGCTACTGTGTTTGAGACGGAGTGTGAGGGAGATTGGTGTCTGTAGCTT
EV569713       --> ..................................................
EY924573       --> ..................................................
FD963044       --> ..................................................
FD962366       --> ..................................................
FD978500       --> ..................................................
FD981535       --> ..................................................
EV565460       --> ..................................................
EX764968       --> ..................................................
FD976790       --> CAGCTACTGTGTTTGAGACGGAGTGTGAGGGAGATTGGTGTCTGTAGCTT

               1751   -   1801
UN13106        --> TGGGAAGCTGAGTATTCTGGTACTCCTTGAGTTGTTTTTCCTTGAGCTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574191       <-- ..................................................
FD974736       <-- ..................................................
EV570765       <-- ..................................................
EV570766       <-- ..................................................
EY920202       <-- ..................................................
FD977276       <-- ..................................................
EX774651       <-- ..................................................
EX768787       <-- ..................................................
FD980990       <-- TGGGAAGCTGAGTATTCTGGTACTCCTTGAGTTGTTTTTCCTTGAGCTTC
EV569713       --> ..................................................
EY924573       --> ..................................................
FD963044       --> ..................................................
FD962366       --> ..................................................
FD978500       --> ..................................................
FD981535       --> ..................................................
EV565460       --> ..................................................
EX764968       --> ..................................................
FD976790       --> TGGGAAGCTGAGTATTCTGGTACTCCTTGAGTTGTTTTTCCTTGAGCTTC

               1801   -   1851
UN13106        --> TTCCGCAAGCTTCCTTAGAAGATTCATAACAGTTGGAAGAAACTTTGATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574191       <-- ..................................................
FD974736       <-- ..................................................
EV570765       <-- ..................................................
EV570766       <-- ..................................................
EY920202       <-- ..................................................
FD977276       <-- ..................................................
EX774651       <-- ..................................................
EX768787       <-- ..................................................
FD980990       <-- TTCCGCAAGCTTCCTTAGAAGATTCATAACAGTTGGAAGAAACTTTGATG
EV569713       --> ..................................................
EY924573       --> ..................................................
FD963044       --> ..................................................
FD962366       --> ..................................................
FD978500       --> ..................................................
FD981535       --> ..................................................
EV565460       --> ..................................................
EX764968       --> ..................................................
FD976790       --> TTCCGCAAGCTTCCTTAGAAGATTCATAACAGTTGGAAGAAACTTTGATG

               1851   -   1901
UN13106        --> TGACGGAGAGTACTCCAGCAAGTGCGCCATGTTGAAACTCCCTAGGAACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574191       <-- ..................................................
FD974736       <-- ..................................................
EV570765       <-- ..................................................
EV570766       <-- ..................................................
EY920202       <-- ..................................................
FD977276       <-- ..................................................
EX774651       <-- ..................................................
EX768787       <-- ..................................................
FD980990       <-- TGACGGAGAGTACTCCAGCAAGTGCGCCATGTTGAAACTCCCTAGGAACG
EV569713       --> ..................................................
EY924573       --> ..................................................
FD963044       --> ..................................................
FD962366       --> ..................................................
FD978500       --> ..................................................
FD981535       --> ..................................................
EV565460       --> ..................................................
EX764968       --> ..................................................
FD976790       --> TGACGGAGAGTACTCCAGCAAGTGCGCCATGTTGAAACTCCCTAGGAACG

               1901   -   1951
UN13106        --> TCAAGCTGCACCCATAAGGCTTTGGAGAGTAAAAACGCCACAAACAGGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574191       <-- ..................................................
FD974736       <-- ..................................................
EV570765       <-- ..................................................
EV570766       <-- ..................................................
EY920202       <-- ..................................................
FD977276       <-- ..................................................
EX774651       <-- ..................................................
EX768787       <-- ..................................................
FD980990       <-- TCAAGCTGCACCCATAAGGCTTTGGAGAGTAAAAACGCCACAAACAGGCC
EV569713       --> ..................................................
EY924573       --> ..................................................
FD963044       --> ..................................................
FD962366       --> ..................................................
FD978500       --> ..................................................
FD981535       --> ..................................................
EV565460       --> ..................................................
EX764968       --> ..................................................
FD976790       --> TCAAGCTGCACCCATAAGGCTTTGGAGAGTAAAAACGCCACAAACAGGCC

               1951   -   2001
UN13106        --> TAAGAGGTACAAAGGATTCCTCAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~
EV574191       <-- .........................
FD974736       <-- .........................
EV570765       <-- .........................
EV570766       <-- .........................
EY920202       <-- .........................
FD977276       <-- .........................
EX774651       <-- .........................
EX768787       <-- .........................
FD980990       <-- TAAGAGGTACAAAGGATTCCTCAAG
EV569713       --> .........................
EY924573       --> .........................
FD963044       --> .........................
FD962366       --> .........................
FD978500       --> .........................
FD981535       --> .........................
EV565460       --> .........................
EX764968       --> .........................
FD976790       --> TAAGAGGTACAAAGGATTCCTCAAG