RadishBase

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Alignment for radish unigene UN13109

               1      -     51
UN13109        --> AAGAGAACAAAGCCAAAGATTCAGACAGAACAAAACCTTTATTGTCGGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529421       <-- ..................................................
EV546300       <-- ..................................................
FD934258       <-- ..................................................
EV571137       <-- ..................................................
EW730695       <-- ..................................................
FD967118       <-- ..................................................
EX775939       <-- ..................................................
FD960141       <-- ..................................................
FD583062       <-- ..................................................
FD935958       <-- ..................................................
EV524422       --> AAGAGAACAAAGCCAAAGATTCAGACAGAACAAAACCTTTATTGTCGGAA
FD964002       --> ..................................................
FD970860       --> ..................................................
EV551147       --> ..................................................
EV565894       --> ..................................................
EX771859       --> ..................................................
FD579004       --> ..................................................
FD982281       --> ..................................................
FD939969       --> ..................................................

               51     -    101
UN13109        --> GCTGACTCACCACCCTATTATAAATACACAAATGTCTCTAGCGGCAATTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529421       <-- ..................................................
EV546300       <-- ..................................................
FD934258       <-- ..................................................
EV571137       <-- ..................................................
EW730695       <-- ..................................................
FD967118       <-- ..................................................
EX775939       <-- ..................................................
FD960141       <-- ..................................................
FD583062       <-- ..................................................
FD935958       <-- ..................................................
EV524422       --> GCTGACTCACCACCCTATTATAAATACACAAATGTCTCTAGCGGCAATTA
FD964002       --> ..................................................
FD970860       --> ..................................................
EV551147       --> ..................................................
EV565894       --> ..................................................
EX771859       --> ..................................................
FD579004       --> ..................................................
FD982281       --> ..................................................
FD939969       --> ..................................................

               101    -    151
UN13109        --> TATGCTAGATTCACAAACCGCTAATAACCAATCATAATCTCGATCTCTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529421       <-- ..................................................
EV546300       <-- ..................................................
FD934258       <-- ..................................................
EV571137       <-- ..................................................
EW730695       <-- ..................................................
FD967118       <-- ..................................................
EX775939       <-- ..................................................
FD960141       <-- ..................................................
FD583062       <-- ..................................................
FD935958       <-- ..................................................
EV524422       --> TATGCTAGATTCACAAACCGCTAATAACCAATCATAATCTCGATCTCTTC
FD964002       --> ................ACCGCTAATAACCAATCATAATCTCGATCTCTTC
FD970860       --> ..........................................ggaTCTTC
EV551147       --> ..................................................
EV565894       --> ..................................................
EX771859       --> ..................................................
FD579004       --> ..................................................
FD982281       --> ..................................................
FD939969       --> ..................................................

               151    -    201
UN13109        --> TCTTTCATCTTTAATCTCGAATCATAAACAAAAGCTTCCTAATTTATATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529421       <-- ..................................................
EV546300       <-- ............................................tttata
FD934258       <-- ..................................................
EV571137       <-- ..................................................
EW730695       <-- ..................................................
FD967118       <-- ..................................................
EX775939       <-- ..................................................
FD960141       <-- ..................................................
FD583062       <-- ..................................................
FD935958       <-- ..................................................
EV524422       --> TCTTTCATCTTTAATCTCGAATCATAAACAAAAGCTTCCTAATTTATATT
FD964002       --> TCTTTCATCTTTAATCTCGAATCATAAACAAAAGCTTCCTAATTTATATT
FD970860       --> TCTTTCATCTTTAATCTCGAACTATCAACAAAAGCTTCCTGCTTTATATT
EV551147       --> ..........ggAATCTCGAATCATAAACAAAAGCTTCCTAATTTATATT
EV565894       --> .....................ggATAAACAAAAGCTTCCTAATTTATATT
EX771859       --> ..................................................
FD579004       --> ..................................................
FD982281       --> ..................................................
FD939969       --> ..................................................

               201    -    251
UN13109        --> CTT-CTGTGTATCTTCTTCTTGTTTCTCAATTCTCATCGTTAGAATCGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529421       <-- ..T-CTGTGTATCT-C-TCTTGTTTCTCAATTCTCATCGT-AGAATCGAA
EV546300       <-- tcT-CTGTGTATCT-CTTCT-GTTTCTCAATTCTCATCGTTAGAATCGAA
FD934258       <-- ..................................................
EV571137       <-- ..................................................
EW730695       <-- ..................................................
FD967118       <-- ..................................................
EX775939       <-- ..................................................
FD960141       <-- ..................................................
FD583062       <-- ..................................................
FD935958       <-- ..................................................
EV524422       --> CTT-CTGTGTATCTTCTTCTTGTTTCTCAATTCTCATCGTTAGAATCGAA
FD964002       --> CTT-CTGTGTATCTTCTTCTTGTTTCTCAATTCTCATCGTTAGAATCGAA
FD970860       --> CTTTCTTTGTATCTTTTTCTTGTTTCTCAATTCTCATCGTTAGAATCGAA
EV551147       --> CTT-CTGTGTATCTTCTTCTTGTTTCTCAATTCTCATCGTTAGAATCGAA
EV565894       --> CTTTCTGTGTATCTTCTTCTTGTTTCTCAATTCTCATCGTTAGAATCGAA
EX771859       --> ....ggGTGTATCTTCTTCTTGTTTCTCAATTCTCATCGTTAGAATCGAA
FD579004       --> .......................TTCTCAATTCTCATCGTTAGAATCGAA
FD982281       --> ..........................TCAATCCTCATCGTTAGAATCGAA
FD939969       --> ..................................................

               251    -    301
UN13109        --> AATGGGTCGAATCAGCATAGTGGCTTCTGATCTGGTATTGTCCTTTATGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529421       <-- AATGGGTCGAATCAGCATAGTGGCTTCTGATCTGTTATTGTCCTTTATGT
EV546300       <-- AATGGGTCGAATCAGCATAGTGGCTTCTGATCTGGTATTGTCCTTTATGT
FD934258       <-- ..................................................
EV571137       <-- ..................................................
EW730695       <-- ..................................................
FD967118       <-- ..................................................
EX775939       <-- ..................................................
FD960141       <-- ..................................................
FD583062       <-- ..................................................
FD935958       <-- ..................................................
EV524422       --> AATGGGTCGAATCAGCATAGTGGCTTCTGAACTGTTATTGTCCTTTATGT
FD964002       --> AATGGGTCGAATCATCATAGTGGCTTCTGATCTGGTATTGTCCTTTATGT
FD970860       --> AATGGGTCGAATCAGCATAGTGGCTTCTGATCTGGTATTGTCCTTTATGT
EV551147       --> AATGGGTCGAATCAGCATAGTGGCTTCTGATCTGGTATTGTCCTTTATGT
EV565894       --> AATGGGTCGAATCAGTATAGTGGCTTCTGATCTGGTATTGTCATTTATGT
EX771859       --> AATGGGTCGAATCAGCATAGTGGCTTCTGATCTGGTATTGTCCTTTATGT
FD579004       --> AATGGGTCGAATCAGTATAGTGGCTTCTGATCTGGTATTGTCATTTATGT
FD982281       --> AATGGGTCGAATCAGTATAGTGGTTTCTGATCTGGTATTGTCCTTTATGT
FD939969       --> ..................................................

               301    -    351
UN13109        --> GGACATGGGCAGGAGTTCTTGTCAACATCTTAGTTCACGGAGTACTCGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529421       <-- GGACATGGGCAGGAGTTCTCGTCAACATCTTAGTTCACGGAG--TTCGGA  Raphanus raphanistrum subsp. maritimus
EV546300       <-- GGACATGGGCAGGAGTTCTCGTCAACATCTTAGTTCACGGAGTACTCGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD934258       <-- ...............TTCTTGTCAACATCTTAGTTCACTGAGTACTCGGA  Raphanus sativus var. oleiformis
EV571137       <-- .............................TTAGTTCACGGAGTACTCGGA  Raphanus raphanistrum subsp. landra
EW730695       <-- .....................................CGGAGTACTCGGA  Raphanus sativus cv Early Scarlet Globe
FD967118       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX775939       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD960141       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD583062       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD935958       <-- ..................................................  Raphanus sativus var. oleiformis
EV524422       --> GGACATGGGCAGGAGTTCTCGTCAACATCTTAGTTCACGGAGT--TCGGA  Raphanus raphanistrum subsp. maritimus
FD964002       --> GGACATGGGCAGGAGTTCTCGTCAACATCTTAATTCACGGAGTACTCGGA  Raphanus raphanistrum subsp. maritimus
FD970860       --> GGACATGGGCAGGGGTTCTTGTCAACATCTTAGTTCACGAAGTACTCGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV551147       --> GGACATGGGCAGGAGTTCTCGTCAACATCTTAGTTCACGGAGTACTCGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV565894       --> GGACATGGGTAGGAGTTCTTGTCAACATCTTAGTTCACGGAGTACTCGGA  Raphanus raphanistrum subsp. landra
EX771859       --> GGACATGGTCAGGAGTTCTTGTCAACATCTTAGTTCACGGAGTACTCGGA  Raphanus raphanistrum subsp. landra
FD579004       --> GGACATGGGCAGGAGTTCTTGTCAACATCTTAGTTCACGGAGTACTCGGA  Raphanus sativus cv Rat-Tail Radish #3870
FD982281       --> GGACATGGGCAGGAGTTCTTGTCAACATCTTAGTTCACGGAGTACTCGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD939969       --> ..................................................  Raphanus sativus var. oleiformis

               351    -    401
UN13109        --> TTCAGCCGGAAA-GATACCACCGGCGAGATCGTCCGGTATCTATTCTCC-
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529421       <-- TTCAGCCGGAAA-GATACCACCGGCGAGATCGTCCGGTATCTATTCTCC-
EV546300       <-- TTCAGCCGGAAAAGATACCACCGGCGAGATCGTCCGGTATCTATTCTCC-
FD934258       <-- TTCAGCCGGAAA-GACACCACCGGCGAGATCGTCCGGTATCTATTCTCC-
EV571137       <-- TTCAGCCGGAAA-GATACCCCCGGCGAGATCGTCCGGTATCTATTCTCC-
EW730695       <-- TTCAGCCGGAAA-GACACCACCGGCGAGATCGTCCGGTATCTATTCTCC-
FD967118       <-- ..................................................
EX775939       <-- ..................................................
FD960141       <-- ..................................................
FD583062       <-- ..................................................
FD935958       <-- ..................................................
EV524422       --> TTCAGCCGGAAA-GATACCACCGGCGAGATCGTCCGGTATCTATTCTCCC
FD964002       --> TTCAGCCGGAAA-GATACCACCGGCGAGATCGTCCGGTATCTATTCTCC-
FD970860       --> TTCAGCCGGAAA-GATACCACCGGCGAGATCGTCCGGTATCTATTCTCC-
EV551147       --> TTCAGCCGGAAA-GATACCACCGGCGAGATCGTCCGGTATCTATTCTCC-
EV565894       --> TTCAGCCGGAAA-GATACCACCGGCGAGATCGTCCGGTATCTATTCTCC-
EX771859       --> TTCAGCCGGAAA-GATACCACCGGCGAGATCGTCCGGTATCTATTCTCC-
FD579004       --> TTCAGCCGGAAA-GATACCACCGGCGAGATCGTCCGGTATCTATTCTCC-
FD982281       --> TTCAGCCGGAAA-GATACCACCGGCGAGATCGTCCGGTATCTATTCTCC-
FD939969       --> ..................................................

               401    -    451
UN13109        --> GTCATCTCCATGTTCGTCTT-CGCTTTCCTTCAGAAACTCACCAAAGGCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529421       <-- GTCATCTCCATGTTCGTCTT-TGCTTTCCTTCAGAAACTCACCAAAGGCG  Raphanus raphanistrum subsp. maritimus
EV546300       <-- GTCATCTCCATGTTCGTCTT-TGCTTTCCTTCAGAAACTCACCAAAGGCG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD934258       <-- GTCATCTCCATGTTCGTCTT-CGCTTTCCTTCAGAAACTCACCAAAGGCG  Raphanus sativus var. oleiformis
EV571137       <-- GTCATCTCCATGTTCGTCTT-CGCTTTCCTTCAGAAACTCACCAAAGGCG  Raphanus raphanistrum subsp. landra
EW730695       <-- GTCATCTCCATGTTCGTCTT-CGCTTT---CCAGAAACTCACCAAAGGCG  Raphanus sativus cv Early Scarlet Globe
FD967118       <-- ..ccTCTCCATGTTCGTCTT-CGCTTTCCTTCAGAAACTCACCAAAGGCG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX775939       <-- .............................TTCAGAAACTCACCAAAGGCG  Raphanus raphanistrum subsp. landra
FD960141       <-- ..........................................CAAAGGCG  Raphanus raphanistrum subsp. maritimus
FD583062       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD935958       <-- ..................................................  Raphanus sativus var. oleiformis
EV524422       --> GTCATCTCCATGTTCGTCTTTTGCTTTCCTTCAGAAACTCACCAAAGGCG  Raphanus raphanistrum subsp. maritimus
FD964002       --> GTCATCTCCATGTTCGTCTT-TGCTTTCCTTCAGAAACTCACCAAAGGCG  Raphanus raphanistrum subsp. maritimus
FD970860       --> GTCCTCTCCATGTTCGTCTT-CGCTTTCCTTCAGAAACTCACCAAAGGCG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV551147       --> GTCATCTCCATGTTCGTCTT-TGCTTTCCTTCAGAAACTCACCAAAGGCG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV565894       --> GTCATCTCCATGTTCGTCTT-CGCTTTCCTTCAGAAACTCACCAAAGGCG  Raphanus raphanistrum subsp. landra
EX771859       --> GTCATCTCCATGTTCGTCTT-TGCTTTCCTTCAGAAACTCACCAAAGGCG  Raphanus raphanistrum subsp. landra
FD579004       --> GTCGTCTCCATGTTCGTCTT-CGCTTTCCTTCAGAAACTCACCAAAGGCG  Raphanus sativus cv Rat-Tail Radish #3870
FD982281       --> GTCATCTCCATGTTCGTCTT-CGCTTTCCTTCAGAAACTCACCAAAGGCG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD939969       --> ..................................................  Raphanus sativus var. oleiformis

               451    -    501
UN13109        --> GACTTTACAACCCTTTGACCGCTTTGGCTGCCGGTGTCACCGGTGGCTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529421       <-- GACTTTACAACCCTTTGACCGCTTTGGCTGCCGGTGTCACCGGTGGCTTC
EV546300       <-- GACTTTACAACCCTTTGACCGCTTTGGCTGCCGGTGT-ACCGGTGGCTTC
FD934258       <-- GACTTTACAACCTTTTGACCGCTTTGGCTGCCGGTGTCACCGGTGGCTTC
EV571137       <-- GACTTTACAACCCTTTGACCGCTTTGGCTGCCGGTGTCACCGGTGGCTTC
EW730695       <-- GACTTTACAACCCTTTGACCGCTTTGGCTGCCGGTGTCACCGGTGGCTTC
FD967118       <-- GACTTTACAACCCTTTGACCGCTTTGGCTGCCGGTGTCACCGGTGGCTTC
EX775939       <-- GACTTTACAACCCCTTGACCGCTTTGGCTGCCGGTGTCACCGGTGGCTTC
FD960141       <-- GACTTTACAACCCTTTGACCGCTTTGGCTGCCGGTGTCACCGGTGGCTTC
FD583062       <-- ..................................................
FD935958       <-- ..................................................
EV524422       --> GACTTTACAACCCTTTGACCGCTTTGGCTGCCGGTGTCACCGGTGGCTTC
FD964002       --> GACTTTACAACCCTTTGACCGCTTTGGCTGCCGGTGTCACCGGTGGCTTC
FD970860       --> GACTTTACAACCCTTTGACCGCTTTGGCTGCCGGTGTCACCGGTGGCTTC
EV551147       --> GACTTTACAACCCTTTGACCGCTTTGGCTGCCGGTGT-ACCGGTGGCTTC
EV565894       --> GACTTTACAACCCTTTGACCGCTTTGGCTGCCGGTGTCACCGGTGGCTTC
EX771859       --> GACTTTACAACCCCTTGACCGCTTTGGCTGCCGGTGTCACCGGTGGCTTC
FD579004       --> GACTTTACAACCCTTTGACCGCTTTGGCTGCCGGTGTCACCGGTGGCTTC
FD982281       --> GACTTTACAACCCTTTGACCGCTTTGGCTGTCGGTGTCACCGGTGGCTTC
FD939969       --> ..................................................

               501    -    551
UN13109        --> GGTAGTTTCATCTTCACCGTCCTGGTTCGAATCCCCGTTGAGGTGATGGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529421       <-- GGTAGTTTCATCTTCACCGTCCTGGTTCGAATCCCCGTTGAGGTGATGGG
EV546300       <-- GGTAGTTTCATCTTCACCGTCCTGGTTCGAATCCCCGTTGAGGTGATGGG
FD934258       <-- GGTAGTTTCATCTTCACCGTCCTGGTTCGAATACCCGTTGAGGTGATGGG
EV571137       <-- GGTAGTTTCATCTTCACCGTCCTGGTTCGAATCCCCGTTGAGGTGATGGG
EW730695       <-- GGTAGTTTCATCTTCACCGTCCTGGTTCGAATACCCGTTGAGGTGATGGG
FD967118       <-- GGTAGTTTCATCTTCACCGTCCTGGTTCGAATCCCCGTTGAGGTGATGGG
EX775939       <-- GGTAGTTTCATCTTCACCGTCCTGGTTCGAATCCCCGTTGAGGTGATGGG
FD960141       <-- GGTAGTTTCATCTTCACCGTCCTGGTTCGAATCCCCGTTGAGGTGATGGG
FD583062       <-- ........................GTTCGAATCCCCGTTGAGGTGATGGG
FD935958       <-- ..................................................
EV524422       --> GGTAGTTTCATCTTCACCGTCCTGGTTCGAATCCCCGTTGAG-TGATGGG
FD964002       --> GGTAGTTTCATCTTCACCGTCCTGG.........................
FD970860       --> GGTAGTTTCATCTTCACCGTCCTGGTTCGAATCCCCGTTGAGGTGATGGG
EV551147       --> GGTAGTTTCATCTTCACCGTCCTGGTTCGAATCCCCGTTGAGGTGATGGG
EV565894       --> GGTAGTTTCATCTTCACCGTCCTGGTTCGAATCCCCGTTGAGGTGATGGG
EX771859       --> GGTAGTTTCATCTTCACCGTCCTGGTTCGAATCCCCGTTGAGGTGATGGG
FD579004       --> GGTAGTTTCATCTTCACCGTCCTGGTTCGAATCCCCGTTGAGGTGATGGG
FD982281       --> GGTAGTTTCATCTTCACCGTCCTGGTTCGAATCCCCGTTGAGGTGATGGG
FD939969       --> ..................................................

               551    -    601
UN13109        --> ATCAATCC-TTGGGGTTAAACATATCATTCATGTTTTCCCTGAGATTGGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529421       <-- ATCAATCC-TTGGGGTTAAACATATCATTCATGTTTTCCCTGAGATTGGG
EV546300       <-- ATCAATCC-TTGGGGTTAAACATATCATTCATGTTTTCCCTGAGATTGGG
FD934258       <-- ATCAATCC-TTGGGGTTAAACATATCATCCATGTTTTCCCTGAGATTGGG
EV571137       <-- ATCAATCC-TTGGGGTTAAACATATCATTCATGTTTTCCCAGAGATTGGG
EW730695       <-- ATCAATCC-TTGGGGTTAAACATATCATCCATGTTTTCCCTGAGATTGGG
FD967118       <-- ATCAATCC-TTGGGGTTAAACATATCATTCATGTTTTCCCTGAGATTGGG
EX775939       <-- ATCAATCC-TTGGGGTTAAACATATCATTCATGTTTTCCCTGAGATTGGG
FD960141       <-- ATCAATCC-TTGGGGTTAAACATATCATTCATGTTTTCCCTGAGATTGGG
FD583062       <-- ATCAATCC-TTGGGGTTAAACATATCATTCATGTTTTCCCAGAGATTGGG
FD935958       <-- ..................................................
EV524422       --> ATCAATCCCTTGGGGTTAAACATATCATTCATGTTT-CCCTGAGATTGGG
FD964002       --> ..................................................
FD970860       --> ATCAATCC-TTGGGGTTAAACATATCATTCATGTTTTCCCTGAGATTGGG
EV551147       --> ATCAATCC-TTGGGGTTAAACATATCATTCATGTTTTCCCTGAGATTGGG
EV565894       --> ATCAATCC-TTGGGGTTAAACATATCATTCATGTTTTCCCAGAGATTGGG
EX771859       --> ATCAATCC-TTGGGGTTAAACATATCATTCATGTTTTCCCTGAGATTGGG
FD579004       --> ATCAATCC-TTGGGGTTAAACATATCATTCATGTTTTCCCAGAGATTGGG
FD982281       --> ATCAATCC-TTGGGGTTAAACATATCATCCATGTTTTCCCAGAGATTGGG
FD939969       --> ..................................................

               601    -    651
UN13109        --> AAAGGACCAAAACTAAATGTAGCGATCCATCACGGTGCTTTAACCGAGGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529421       <-- AAAGGACCAAAGCTAAATGTAGCGATCCATCACGGTGCTTTAACCGAGGG  Raphanus raphanistrum subsp. maritimus
EV546300       <-- AAAGGACCAAAGCTAAATGTAGCGATCCATCACGGTGCTTTAACCGAGGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD934258       <-- AAAGGACCAAAACTAAATGTAGCGATCCATCACGGTGCTTTAACCGAGGG  Raphanus sativus var. oleiformis
EV571137       <-- AAAGGACCAAAACTAAATGTAGCGATCCATCGCGGTGCTTTAACCGAGGG  Raphanus raphanistrum subsp. landra
EW730695       <-- AAAGGACCAAAACTAAATGTAGCGATCCATCACGGTGCTTTAACCGAGGG  Raphanus sativus cv Early Scarlet Globe
FD967118       <-- AAAGGACCAAAACTAAATGTAGCGATCCATCACGGTGCTTTAACCGAGGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX775939       <-- AAAGGACCAAAGCTAAATGTAGCGATCCATCACGGTGCTTTAACCGAGGG  Raphanus raphanistrum subsp. landra
FD960141       <-- AAAGGACCAAAGCTAAATGTAGCGATCCATCACGGTGCTTTAACCGAGGG  Raphanus raphanistrum subsp. maritimus
FD583062       <-- AAAGGACCAAAACTAAATGTAGCGATCCATCACGGTGCTTTAACCGAGGG  Raphanus sativus cv Rat-Tail Radish #3870
FD935958       <-- ..................................................  Raphanus sativus var. oleiformis
EV524422       --> AAAG-ACCAAAGCTAAATGTAGCGATCCATCACGtgc.............  Raphanus raphanistrum subsp. maritimus
FD964002       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD970860       --> AAAGGACCAAAACTAAATGTAGCGATCCATCACGGTGCTTTAACCGAGGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV551147       --> AAAGGACCAAAGCTAAATGTAGCGATCCATCACGGTGCTTTAACCGAGGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV565894       --> AAAGGACCAAAACTAAATGTAGCGATCCATCGCGGTGCTTTAACCGAGGG  Raphanus raphanistrum subsp. landra
EX771859       --> AAAGGACCAAAGCTAAATGTAGCGATCCATCACGGTGCTTTAACCGAGGG  Raphanus raphanistrum subsp. landra
FD579004       --> AAAGGACCAAAACTAAATGTAGCGATCCATCACGGTGCTTTAACCGAGGG  Raphanus sativus cv Rat-Tail Radish #3870
FD982281       --> AAAGGACCAAAACTAAATGTAGCGATCCATCACGGTGCCTTAACCGAGGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD939969       --> ..................................................  Raphanus sativus var. oleiformis

               651    -    701
UN13109        --> GGTACTAACATTCTTCATTGTAATGCTCTCAATGGGACTAGCAAGAAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529421       <-- GGTACTAACATTCTTCATTGTAATGCTCTCGATGGGACTAGCAAGAAAGA  Raphanus raphanistrum subsp. maritimus
EV546300       <-- GGTACTAACATTCTTCATTGTAATGCTCTCGATGGGACTAGCAAGAAAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD934258       <-- GGTACTAACATTCTTCATTGTAATGCTCTCACTGGGACTAGCAAGAAAGA  Raphanus sativus var. oleiformis
EV571137       <-- GGTACTAACATTCTTCATTGTAATGCTCTCATTGGGACTAGCAAGAAAGA  Raphanus raphanistrum subsp. landra
EW730695       <-- GGTACTAACATTTTTCATTGTAATGCTCTCACTGGGACTAGCAAGAAAGA  Raphanus sativus cv Early Scarlet Globe
FD967118       <-- GGTACTAACATTCTTCATTGTAATGCTCTCACTGGGACTAGCAAGAAAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX775939       <-- GGTACTAACATTCTTCATTGTAATGCTCTCGATGGGACTAGCAAGAAAGA  Raphanus raphanistrum subsp. landra
FD960141       <-- GGTACTAACATTCTTCATTGTAATGCTCTCGATGGGACTAGCAAGAAAGA  Raphanus raphanistrum subsp. maritimus
FD583062       <-- GGTACTAACATTCTTCATTGTAATGCTCTCATTGGGACTAGCAAGAAAGA  Raphanus sativus cv Rat-Tail Radish #3870
FD935958       <-- ..................................................  Raphanus sativus var. oleiformis
EV524422       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD964002       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD970860       --> GGTACTAACATTCTTCATTGTAATGCTCTCACTGGGACTAGCAAGAAAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV551147       --> GGTACTAACATTCTTCATTGTAATGCTCTCGATGGGACTAGCAAGAAAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV565894       --> GGTACTAACATTCTTCATTGTAATGCTCTCATTGGGACTAGCAAGAAAGA  Raphanus raphanistrum subsp. landra
EX771859       --> GGTACTAACATTCTTCATTGTAATGCTCTCGATGGGACTAGCAAGAAAGA  Raphanus raphanistrum subsp. landra
FD579004       --> GGTACTAACATTCTTCATTGTAATGCTCTCATTGGGACTAGCAAGAAAGA  Raphanus sativus cv Rat-Tail Radish #3870
FD982281       --> GGTACTAACATTCTTCATTGTAATGCTCTCACTGGGACTAGCAAGA....  Raphanus raphanistrum subsp. raphanistrum (NY)
FD939969       --> ..................................................  Raphanus sativus var. oleiformis

               701    -    751
UN13109        --> TCCCTGGAAGTTTCTTCATGAAGACTTGGATTGGTAGCATTGCTAAATTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529421       <-- TCCCTGGAAGTTTCTTCATGAAGACTTGGATTGGTAGCATTGCTAAATTA
EV546300       <-- TCCCTGGAAGTTTCTTCATGAAGACTTGGATTGGTAGCATTGCTAAATTA
FD934258       <-- TCCCTGGAAGTTTCTTCATGAAGACTTGGATTGGTAGCATTGCTAAATTA
EV571137       <-- TCCCTGGAAGTTTCTTCATGAAGACTTGGATTGGTAGCATTGCTAAATTA
EW730695       <-- TCCCTGGAAGTTTTTTCATGAAGACTTGGATTGGTAGCATTGCTAAATTA
FD967118       <-- TCCCTGGAAGTTTCTTCATGAAGACTTGGATTGGTAGCATTGCTAAATTA
EX775939       <-- TCCCTGGAAGTTTTTTCATGAAGACTTGGATTGGTAGCATTGCTAAATTA
FD960141       <-- TCCCTGGAAGTTTCTTCATGAAGACTTGGATTGGTAGCATTGCTAAATTA
FD583062       <-- TCCCTGGAAGTTTCTTCATGAAGACTTGGATTGGTAGCATTGCTAAATTA
FD935958       <-- ..................................................
EV524422       --> ..................................................
FD964002       --> ..................................................
FD970860       --> TCCCTGGAAGTTTCTTCATGAAGACTTGGATTGGTAGCATTGCTAAATTA
EV551147       --> TCCCTGGAAGTTTCTTCATGAAGACTTGGATTGGTAGCATTGCTAAATTA
EV565894       --> TCCCTGGAAGTTTCTTCATGAAGACTTGGATTGGTAGCATTGCTAAATTA
EX771859       --> TCCCTGGAAGTTTCTTCATGAAGACTTGGATTGGTAGCATTGCTAAATTA
FD579004       --> TCCCTGGAAGTTTCTTCATGAAGACTTGGATTGGTAGCATTGCTAAATTA
FD982281       --> ..................................................
FD939969       --> ..................................................

               751    -    801
UN13109        --> AGTCTCCATGTTCTTGGAGCTGATCTAACCGGCGGATGCATGAATCCAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529421       <-- AGTCTCCATGTTCTTGGAGCTGATCTAACCGGCGGATGCATGAATCCAGC
EV546300       <-- AGTCTCCATGTTCTTGGAGCTGATCTAACCGGCGGATGCATGAATCCAGC
FD934258       <-- AGTCTCCATGTTCTTGGAGCTGATCTAACCGGCGGATGCATGAATCCAGC
EV571137       <-- AGTCTCCATGTTCTTGGAGCTGATCTAACCGGCGGATGCATGAATCCAGC
EW730695       <-- AGTCTCCATGTTCTTGGAGCTGATCTAACCGGCGGATGCATGAATCCAGC
FD967118       <-- AGTCTCCATGTTCTTGGAGCTGATCTAACCGGCGGATGCATGAATCCAGC
EX775939       <-- AGTCTCCATGTTCTTGGAGCTGATCTAACCGGCGGATGCATGAATCCAGC
FD960141       <-- AGTCTCCATGTTCTTGGAGCTGATCTAACCGGCGGATGCATGAATCCAGC
FD583062       <-- AGTCTCCATGTTCTTGGAGCTGATCTAACCGGCGGATGCATGAATCCAGC
FD935958       <-- ...................gTGATCTAACCGGCGGATGCATGAATCCAGC
EV524422       --> ..................................................
FD964002       --> ..................................................
FD970860       --> AGTCTCCATGTTCTTGGAGCTGATCTAACCGGCGGATGCATGAATCCAGC
EV551147       --> AGTCTCCATGTTCTTGGAGCTGATCTAACCGGCGGATGCATGAATCCAGC
EV565894       --> AGTCTCCATGTTCTTGGAGCTGATCTAACCGGCGGATGCATGAATCCAGC
EX771859       --> AGTCTCCATGTTCTTGGAGCTGATCTAACCGGCGGATGCATGAATCCAGC
FD579004       --> AGTCTCCATGTTCTTGGAGCTGATCTAACCGGCGGATGCATGAATCCAGC
FD982281       --> ..................................................
FD939969       --> ...................gTGATCTAACCGGCGGATGCATGAATCCAGC

               801    -    851
UN13109        --> AGCGGTTATGGGATGGGCTTATGCACGCGGTGAGCATATAACACAGGAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529421       <-- AGCGGTTATGGGATGGGCTTATGCACGCGGTGAGCATATAACACAGGAGC  Raphanus raphanistrum subsp. maritimus
EV546300       <-- AGCGGTTATGGGATGGGCTTATGCACGCGGTGAGCATATAACACAGGAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD934258       <-- AGCGGTTATGGGATGGGCTTATGCACGCGGTGAGCATATAACACAGGAGC  Raphanus sativus var. oleiformis
EV571137       <-- AGCGGTTATGGGATGGGCTTACGCACGAGGTGAACATATAACACAGGAGC  Raphanus raphanistrum subsp. landra
EW730695       <-- AGCGGTTATGGGATGGGCTTATGCACGCGGTGAGCATATAACACAGGAGC  Raphanus sativus cv Early Scarlet Globe
FD967118       <-- AGCGGTTATGGGATGGGCTTATGCACGCGGTGAACATATAACACAGGAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX775939       <-- AGCGGTTATGGGATGGGCTTATGCACGCGGTGAGCATATAACACAGGAGC  Raphanus raphanistrum subsp. landra
FD960141       <-- AGCGGTTATGGGATGGGCTTATGCACGCGGTGAGCATATAACACAGGAGC  Raphanus raphanistrum subsp. maritimus
FD583062       <-- AGCGGTTATGGGATGGGCTTACGCACGAGGTGAACATATAACACAGGAGC  Raphanus sativus cv Rat-Tail Radish #3870
FD935958       <-- AGCGGTTATGGGATGGGCTTATGCACGCGGTGAGCATATAACACAGGAGC  Raphanus sativus var. oleiformis
EV524422       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD964002       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD970860       --> AGCGGTTATGGGATGGGCTTATGCACGCGGTGAACATATAACACAG-AGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV551147       --> AGCGGTTATGGGATGGGCTTATGCACGCGGTGAGCATATAACACAGGAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV565894       --> AGCGGTTATGGGATGGGCTTACGCACGAGGTGAACATATAACACAGGAGC  Raphanus raphanistrum subsp. landra
EX771859       --> AGCGGTTATGGGATGGGCTTATGCACGCGGTGAGCATATAACACAGGAGC  Raphanus raphanistrum subsp. landra
FD579004       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD982281       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD939969       --> AGCGGTTATGGGATGGGCTTATGCACGCGGTGAGCATATAACACAGGAGC  Raphanus sativus var. oleiformis

               851    -    901
UN13109        --> ATTTACTTGTGTATTGGCTTGGACCTATAAAGGCGACATTGCTTGCTGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529421       <-- ATTTACTTGTGTATTGGCTTGGACCTATAAAGGCGACATTGCTTGCTGTT
EV546300       <-- ATTTACTTGTGTATTGGCTTGGACCTATAAAGGCGACATTGCTTGCTGTT
FD934258       <-- ATTTACTTGTGTATTGGCTTGGACCTATAAAGGCGACATTGCTTGCTGTT
EV571137       <-- ATTTACTTGTGTATTGGCTTGGACCTATCAAGGCGACATTGCTTGCTGTT
EW730695       <-- ATTTACTTGTGTATTGGCTTGGACCTATAAAGGCGACATTGCTTGCTGTT
FD967118       <-- ATTTACTTGTGTATTGGCTTGGACCTATAAAGGCGACATTGCTTGCTGTT
EX775939       <-- ATTTACTTGTGTATTGGCTTGGACCTATAAAGGCGACATTGCTTGCTGTT
FD960141       <-- ATTTACTTGTGTATTGGCTTGGACCTATAAAGGCGACATTGCTTGCTGTT
FD583062       <-- ATTTACTTGTGTATTGGCTTGGACCTATCAAGGCGACATTGCTTGCTGTT
FD935958       <-- ATTTACTTGTGTATTGGCTTGGACCTATAAAGGCGACATTGCTTGCTGTT
EV524422       --> ..................................................
FD964002       --> ..................................................
FD970860       --> ATTTACTTGTGTATTGGCT-GGACCTATAAAG-CGACAT-GCTTGCTGTT
EV551147       --> ATTTACTTGTGTATTGGCTTGGACCTATAAAGGCGACATTGCTTGCTGTT
EV565894       --> ATTTACTTGTGTATTGGCTTGGACCTATCAAGGCGACATTGCTTGCTGTT
EX771859       --> ATTTACTTGTGTATTGGCTTGGACCTATAAAGGCGACATTGCTTGCTGTT
FD579004       --> ..................................................
FD982281       --> ..................................................
FD939969       --> ATTTACTTGTGTATTGGCTTGGACCTATAAAGGCGACATTGCTTGCTGTT

               901    -    951
UN13109        --> TGGTTCTTCAATGTCGTGTTTAAGCCTCTCACCGAAGAACAAGAGAAACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529421       <-- TGGTTCTTCAATGTCGTGTTTAAGCCTCTCACCGAAGA............
EV546300       <-- TGGTTCTTCAATGTCGTGTTTAAGCCTCTCACCGAAGAACAAGAGAAACC
FD934258       <-- TGGTTCTTCAATGTCGTGTTTAAGCCTCTCACCGAAGAACAAGAGAAACC
EV571137       <-- TGGTTCTTCAATGTTGTGTTTAAGCCTCTCACCGAAGAACAAGAGAAACC
EW730695       <-- TGGTTTTTCAATGTCGTGTTTAAGCCTCTCACCGAAGAACAAGAGAAACC
FD967118       <-- TGGTTCTTCAATGTCGTGTTTAAGCCTCTCACCGAAGAACAAGAGAAACC
EX775939       <-- TGGTTCTTCAATGTCGTGTTTAAGCCTCTCACCGAAGAACAAGAGAAACC
FD960141       <-- TGGTTCTTCAATGTCGTGTTTAAGCCTCTCACCGAAGAACAAGAGAAACC
FD583062       <-- TGGTTTTTCAATGTTGTGTTTAAGCCTCTCACCGAAGAACAAGAGAAACC
FD935958       <-- TGGTTCTTCAATGTCGTGTTTAAGCCTCTCACCGAAGAACAAGAGAAACC
EV524422       --> ..................................................
FD964002       --> ..................................................
FD970860       --> TGGTTCTTCA-TGTCGTGTTTA............................
EV551147       --> TGGTTCTTCAATGTCGTGTTTAAGCCTCTCACCGAAGA-CAAGAGAAc..
EV565894       --> TGGTTCTTCAATGTTGTGTTTAAGCCTCTCACCGAAGAACAAGAGAAACC
EX771859       --> TGGTTCTTCAATGTCGTGTT-AAGCCTCTCACCGAAGA-CAAGAGAA-CC
FD579004       --> ..................................................
FD982281       --> ..................................................
FD939969       --> TGGTTCTTCAATGTCGTGTTTAAGCCTCTCACCGAAGAACAAGAGAAACC

               951    -   1001
UN13109        --> TAAGGCTAAATCTGATTGAGTAATAGAGTTTTAGCTCTCATATTCAATCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529421       <-- ..................................................
EV546300       <-- TAAGGCTAAATCTGATTGAGTAATAGAGTTTTAGCTCTCATATTCAATCC
FD934258       <-- TAAGGCTAAATCTGATTGAGTAATAGAGTTTTAGCTCTCATATTCAATCC
EV571137       <-- TAAGGCTAAATCTGATTGAGTAATAGAGTTTTAGCTCTCATATTCAATCC
EW730695       <-- TAAGGCTAAATTTGATTGAGTAATAGAGTTTTAGCTCTCATATTCAATCC
FD967118       <-- TAAGGCTAAATCTGATTGAGTAATAGAGTTTTAGCTCTCATATTCAATCC
EX775939       <-- TAAGGCTAAATTTGATTGAGTAATAGAGTTTTAGCTCTCATATTCAATCC
FD960141       <-- TAAGGCTAAATCTGATTGAGTAATAGAGTTTTAGCTCTCATATTCAATCC
FD583062       <-- TAAGGCTAAATCTGATTGAGTAATAGAGTTTTAGCTCTCATATTCAATCC
FD935958       <-- TAAGGCTAAATCTGATTGAGTAATAGAGTTTTAGCTCTCATATTCAATCC
EV524422       --> ..................................................
FD964002       --> ..................................................
FD970860       --> ..................................................
EV551147       --> ..................................................
EV565894       --> TAAGGCTAAATCTGATTGAGTAATAGAGTTTTAGCTCTCATATTCAATCC
EX771859       --> TAAG-CTAA-TCTGAT-GAGTA-TAGAGTTT-AGCTCTCATATTCA-TC-
FD579004       --> ..................................................
FD982281       --> ..................................................
FD939969       --> TAAGGCTAAATCTGATTGAGTAATAGAGTTTTAGCTCTCATATTCAATCC

               1001   -   1051
UN13109        --> TCTTCTCATTAGTTTACCTTAATGCGTTTATGTATGTAGCAAACTCAACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529421       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV546300       <-- TCTTCTCATTAGTTTACCTTAATGCGTTTATGTATGTAGCAAACTCAACT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD934258       <-- TCTTCTCATTAGTTTACCTTAATGCGTTTATGTATGTAGCAAACTCAATT  Raphanus sativus var. oleiformis
EV571137       <-- TCTTCTCATTAGTTTACCTTAATGCGTTTATGTATGTAGCAAACTCAACT  Raphanus raphanistrum subsp. landra
EW730695       <-- TCTTCTCATTAGTTTACCTTAATGCGTTTATGTATGTAGCAAACTCAATT  Raphanus sativus cv Early Scarlet Globe
FD967118       <-- TCTTCTCATTAGTTTACCTTAATGCGTTTATGTATGTAGCAAACTCAACT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX775939       <-- TCTTCTCATTAGTTTACCTTAATGCGTTTATGTATGTAGCAAACTCAACT  Raphanus raphanistrum subsp. landra
FD960141       <-- TCTTCTCATTAGTTTACCTTAATGCGTTTATGTATGTAGCAAACTCAACT  Raphanus raphanistrum subsp. maritimus
FD583062       <-- TCTTCTCATTAGTTTACCTTAATGCGTTTATGTATGTAGCAAACTCAACT  Raphanus sativus cv Rat-Tail Radish #3870
FD935958       <-- TCTTCTCATTAGTTTACCTTAATGCGTTTATGTATGTAGCAAACTCAATT  Raphanus sativus var. oleiformis
EV524422       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD964002       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD970860       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV551147       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV565894       --> TCTTCTCATTAGTTTACCTTAATGCGTTTATGTATGT.............  Raphanus raphanistrum subsp. landra
EX771859       --> TCT-CTCAT-AGTT-AC-TTA-TGCGTTTTTGTATGTA............  Raphanus raphanistrum subsp. landra
FD579004       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD982281       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD939969       --> TCTTCTCATTAGTTTACCTTAATGCGTTTATGTATGTAGCAAACTCAATT  Raphanus sativus var. oleiformis

               1051   -   1101
UN13109        --> GTAACAATCAGTTCAATAAAACCTGCAGAGTATTTTGGTTTATC..
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529421       <-- ..............................................
EV546300       <-- GTAACAATTAGTTCAATAAAACCTGCAGAGTATTTTGGTT......
FD934258       <-- GTAACAATCAGTTCAATAAAACCTGCAGAGTATTTTGGTTTATCgc
EV571137       <-- GTAACAATCAGTTCAATAAAACCTGCAGAGTATTTTGGTTTAaaac
EW730695       <-- GTAACAATCAGTTCAATAAAACCTGCAGAGTATTTTGGTTT.....
FD967118       <-- GTAACAATCAGTTCAATAAAACCTGCCGAGTATTTTGGTTTATCac
EX775939       <-- GTAACAATTAGCTCAATAAAACCTGCAGAGTATTTTGGTT......
FD960141       <-- GTAACAATTAGTTCAATAAAACCTGCAGAGTATTTTGGTg......
FD583062       <-- GTAACAATCAGTTCAATAAAACCTGCAGAGTATTTTGGTTTATCcc
FD935958       <-- GTAACAATCAGTTCAATAAAACCTGCAGAGTc..............
EV524422       --> ..............................................
FD964002       --> ..............................................
FD970860       --> ..............................................
EV551147       --> ..............................................
EV565894       --> ..............................................
EX771859       --> ..............................................
FD579004       --> ..............................................
FD982281       --> ..............................................
FD939969       --> GTAACAATCAGTTCAATAAAACCTGCAGAGTc..............