1      -     51
UN13134        --> GGAGAGGAAATAAATATCTTGAA--TCTTAGAGAAGAAGG-A-AA-G-GA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532254       <-- GGAGAGGAAATAAATATCTTGAAAATCTTAGAGAAGAAGG-AGAA-GAGA  Raphanus raphanistrum subsp. maritimus
EX900202       <-- GGAGAGGAAATAAATATCTTGAAAATCTTAGAGAAGAAGG-A-AAAGAGA  Raphanus sativus cv Early Scarlet Globe
EV573593       <-- ................................tagagaaG-A-AG-G-GA  Raphanus raphanistrum subsp. landra
EV540795       <-- ......................................ggaA-AA-G-GA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY901856       <-- ......................................ggaA-AA-G-GA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW727942       <-- .........................................gaaaagaGA  Raphanus sativus cv Early Scarlet Globe
FD573357       <-- ........................................ggaaaagaGA  Raphanus sativus cv Early Scarlet Globe
EX761217       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD976773       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX759806       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD537953       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD960983       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX774565       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY934043       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV528198       --> GGAGAGGAAATAAATATCTTGAAAATCTTAGAGAAGAAGG-AGAA-GAGA  Raphanus raphanistrum subsp. maritimus
EV568984       --> GGAGAGGAAATAAATATCTTGAA--TCTTAGAGAAGAAGG--------GA  Raphanus raphanistrum subsp. landra
EX757696       --> GGAGAGGAAATAAATATCTTGAA--TCTTAGAGAAGAAGG-A-AAAG-GA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX770359       --> GGAGAGGAAATAAATATCTTGAA--TCTTAGAGAAGAAGG--------GA  Raphanus raphanistrum subsp. landra
EY937793       --> GGAGAGGAAATAAATATCTTGAAAATCTTAGAGAAGAAGG-A-AAAGAGA  Raphanus sativus cv Early Scarlet Globe
FD965163       --> GGAGAGGAAATAAATATCTTGAA--TCTTAGAGAAGAAGGGA-AA-A-GA  Raphanus raphanistrum subsp. maritimus
EV568887       --> ....gGGAAATAAATATCTTGAA--TCTTAGAGAATAAGG--------GA  Raphanus raphanistrum subsp. landra
EV536319       --> ......................................ggaA-AA-G-GA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY905413       --> ......................................ggaA-AA-G-GA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD563000       --> .......................................gggaaaagaGA  Raphanus sativus var. oleiformis
FD569093       --> ........................................ggaaaagaGA  Raphanus sativus cv Early Scarlet Globe
EX755877       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD541732       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD980971       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX755825       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW723067       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX896257       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               51     -    101
UN13134        --> GAAGGAAAGAAAAGATGGCGACGGAGAAGAAAGAGATGGAAGTGGTGAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532254       <-- GAAGGAAAGAAAAGATGGCGACGGAGAAGAAAGAGATGGAAGTGGTGAAA  Raphanus raphanistrum subsp. maritimus
EX900202       <-- GAAGGAAAGAAAAGATGGCGACGGAGAAGAAAGAGATGGAATTGGTGAAA  Raphanus sativus cv Early Scarlet Globe
EV573593       <-- AAAGAAAAGAAAAGATGGCGACGGAGAAGAAAGAGATGGAAGTGGTGAAA  Raphanus raphanistrum subsp. landra
EV540795       <-- GAAGGAAAGAAAAGATGGCGACGGAGAAGAAAGAGATGGAAGTGGTGAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY901856       <-- GAAGGAAAGAAAAGATGGCGACGGAGAAGAAAGAGATGGAAGTGGTGAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW727942       <-- GAAGGAAAGAAAAGATGGCGACGGAGAAGAAAGAGATGGAAGTGGTGAAA  Raphanus sativus cv Early Scarlet Globe
FD573357       <-- GAAGGAAAGAAAAGATGGCGACGGAGAAGAAAGAGATGGAAGTGATGAAA  Raphanus sativus cv Early Scarlet Globe
EX761217       <-- ........GAAAAGATGGCGACGGAGAAGAAAGAGATGGAAGTGGTGAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD976773       <-- .................ggGACGGAGAAGAAAGAGATGGAAGTGGTGAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX759806       <-- ............................GAAAGAGATGGAAGTGGTGAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD537953       <-- .......................................AAGTGGTGAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD960983       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX774565       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY934043       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV528198       --> GAAGGAAAGAAAAGATGGCGACGGAGAAGAAAGAGATGGAAGTGGTGAAA  Raphanus raphanistrum subsp. maritimus
EV568984       --> AAAGAAAAGAAAAGATGGCGACGGAGAAGAAAGAGATGGAAGTGGTGAAA  Raphanus raphanistrum subsp. landra
EX757696       --> GAAGGAAAGAAAAGATGGCGACGGAGAAGAAAGAGATGGAAGTGGTGAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX770359       --> AAAGAAAAGAAAAGATGGCGACGGAGAAGAAAGAGATGGAAGTGGTGAAA  Raphanus raphanistrum subsp. landra
EY937793       --> GAAGGAAAGAAAAGATGGCGACGGAGAAGAAAGAGATGGAAGTGGTGAAA  Raphanus sativus cv Early Scarlet Globe
FD965163       --> AAAGAAAAGAAAAGATGGCGACGGAGAAGAAAGAGATGGAAGTGGTGAAA  Raphanus raphanistrum subsp. maritimus
EV568887       --> AAAGAAAAGAAAAGATGGCGACGGAGAAGAAAGAGATGGAAGTGGTGAAA  Raphanus raphanistrum subsp. landra
EV536319       --> GAAGGAAAGAAAAGATGGCGACGGAGAAGAAAGAGATGGAAGTGGTGAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY905413       --> GAAGGAAAGAAAAGATGGCGACGGAGAAGAAAGAGATGGAAGTGGTGAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD563000       --> GAAGGAAAGAAAAGATGGCGACGGAGAAGAAAGAGATGGAAGTGGTGAAA  Raphanus sativus var. oleiformis
FD569093       --> GAAGGAAAGAAAAGATGGCGACGGAGAAGAAAGAGATGGAAGTGATGAAA  Raphanus sativus cv Early Scarlet Globe
EX755877       --> .ggGGAAAGAAAAGATGGCGACGGGGAAGAAAGAGATGGAAGTGGTGAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD541732       --> .............GATGGCGACGGAGAAGAAAGAGATGGAAGTGGTGAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD980971       --> .................ggGACGGAGAAGAAAGAGATGGAAGTGGTGAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX755825       --> ............................GAAAGAGATGGAAGTGGTGAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW723067       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX896257       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               101    -    151
UN13134        --> GGTCTAGACTTGGAGAGGTACATGGGCCGTTGGTACGAGATTGCTTCTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532254       <-- GGTCTAGACTTGGAGAGGTACATGGGCCGTTGGTACGAGATTGCTTCTTT
EX900202       <-- GGTCTAGACTTGGAGAGGTACATGGGCCGTTGGTACGAGATTGCTTCTTT
EV573593       <-- GGTCTAGACTTGGAGAGGTACATGGGCCGTTGGTACGAGATTGCTTCTTT
EV540795       <-- GGTCTAGACTTGGAGAGGTACATGGGCCGTTGGTACGAGATTGCTTCTTT
EY901856       <-- GGTCTAGACTTGGAGAGGTACATGGGCCGTTGGTACGAGATTGCTTCTTT
EW727942       <-- GGTCTAGACTTGGAGAGGTACATGGGCCGTTGGTACGAGATTGCTTCTTT
FD573357       <-- GGTCTAGACTTGGAGAGGTACATGGGCCGTTGGTACGAGATTGCTTCTTT
EX761217       <-- GGTCTAGACTTGGAGAGGTACATGGGCCGTTGGCACGAGATTGCTTCTTT
FD976773       <-- GGTCTAGACTTGGAGAGGTACATGGGCCGTTGGTACGAGATTGCTTCTTT
EX759806       <-- GGTCTAGACTTGGAGAGGTACATGGGCCGTTGGTACGAGATTGCTTCTTT
FD537953       <-- GGTCTAGACTTGGAGAGGTACATGGGCCGTTGGTACGAGATTGCTTCTTT
FD960983       <-- ................................................TT
EX774565       <-- ..................................................
EY934043       <-- ..................................................
EV528198       --> GGTCTAGACTTGGAGAGGTACATGGGCCGTTGGTACGAGATTGCTTCTTT
EV568984       --> GGTCTAGACTTGGAGAGGTACATGGGCCGTTGGTACGAGATTGCTTCTTT
EX757696       --> GGTCTAGACTTGGAGAGGTACATGGGCCGTTGGCACGAGATTGCTTCTTT
EX770359       --> GGTCTAGACTTGGAGAGGTACATGGGCCGTTGGTACGAGATTGCTTCTTT
EY937793       --> GGTCTAGACTTGGAGAGGTACATGGGCCGTTGGTACGAGATTGCTTCTTT
FD965163       --> GGTCTAGACTTGGAGAGGTACATGGGCCGTTGGTACGAGATTGCTTCTTT
EV568887       --> GGTCTAGACTTGGAGAGGTACATGGGCCGTTGGTACGTGATTGCTTCTTT
EV536319       --> GGTCTAGACTTGGAGAGGTACATGGGCCGTTGGTACGAGATTGCTTCTTT
EY905413       --> GGTCTAGACTTGGAGAGGTACATGGGCCGTTGGTACGAGATTGCTTCTTT
FD563000       --> GGTCTAGACTTGGAGAGGTACATGGGCCGTTGGTACGAGATTGCTTCTTT
FD569093       --> GGTCTAGACTTGGAGAGGTACATGGGCCGTTGGTACGAGATTGCTTCTTT
EX755877       --> GGTCTAGACTTGGAGAGGTACATGGGCCGCTGGTACGAGATTGCTTCTTT
FD541732       --> GGTCTAGACTTGGAGAGGTACATGGGCCGTTGGTACGAGATTGCTTCTTT
FD980971       --> GGTCTAGACTTGGAGAGGTACATGGGCCGTTGGTACGAGATTGCTTCTTT
EX755825       --> GGTCTAGACTTGGAGAGGTACATGGGCCGTTGGTACGAGATTGCTTCTTT
EW723067       --> ...............................................TTT
EX896257       --> ..................................................

               151    -    201
UN13134        --> CCCTTCCAGGTTTCAGCCCAAGGACGGTGTAGACACTCGCGCCACCTACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532254       <-- CCCTTCCAGGTTTCAGCCCAAGGACGGTGTAGACACTCGCGCCACTTACA  Raphanus raphanistrum subsp. maritimus
EX900202       <-- CCCTTCCAGGTTTCAGCCCAAGGACGGTGTAGACACTCGCGCCACTTACA  Raphanus sativus cv Early Scarlet Globe
EV573593       <-- CCCTTCCAGGTTTCAGCCCAAGGACGGTGTAGACACTCGCGCCACCTACA  Raphanus raphanistrum subsp. landra
EV540795       <-- CCCATCCAGGTTTCAGCCCAAGGACGGTGTAGACACTCGCGCCACCTACA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY901856       <-- CCCATCCAGGTTTCAGCCCAAGGACGGTGTAGACACTCGCGCCACCTACA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW727942       <-- CCCTTCCAGGTTTCAGCCCAAGGACGGTGTAGACACTCGCGCCACTTACA  Raphanus sativus cv Early Scarlet Globe
FD573357       <-- CCCTTCCAGGTTTCAGCCCAAGGACGGTGTAGACACTCGCGCCACTTACA  Raphanus sativus cv Early Scarlet Globe
EX761217       <-- CCCATCCAGGTTTCAGCCCAAGGACGGTGTAGACACTCGCGCCACCTACA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD976773       <-- CCCTTCCAGGTTTCAGCCCAAGGACGGTGTAGACACTCGCGCCACCTACA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX759806       <-- CCCATCCAGGTTTCAGCCCAAGGACTGTGTGGACACTCGCGCCACCTACA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD537953       <-- CCCATCCAGGTTTCAGCCCAAGGACGGTGTAGACACTCGCGCCACCTACA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD960983       <-- CCCTTCCAGGTTTCAGCCCAAGGACG-TGTAGACACTCGCGCCACCTACA  Raphanus raphanistrum subsp. maritimus
EX774565       <-- ......CAGGTTTCAGCCCAAGGACGGTGTAGACACTCGCGCCACCTACA  Raphanus raphanistrum subsp. landra
EY934043       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV528198       --> CCCTTCCAGGTTTCAGCCCAAGGACGGTGTAGACACTCGCGCCACTTACA  Raphanus raphanistrum subsp. maritimus
EV568984       --> CCCTTCCAGGTTTCAGCCCAAGGACGGTGTAGACACTCGCGCCACCTACA  Raphanus raphanistrum subsp. landra
EX757696       --> CCCATCCAGGTTTCAGCCCAAGGACGGTGTAGACACTCGCGCCACCTACA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX770359       --> CCCTTCCAGGTTTCAGCCCAAGGACGGTGTAGACACTCGCGCCACCTACA  Raphanus raphanistrum subsp. landra
EY937793       --> CCCTTCCAGGTTTCAGCCCAAGGACGGTGTAGACACTCGCGCCACTTACA  Raphanus sativus cv Early Scarlet Globe
FD965163       --> CCCTTCCAGGTTTCAGCCCAAGGACG-TGTAGACACTCGCGCCACCTACA  Raphanus raphanistrum subsp. maritimus
EV568887       --> CCCTTCCAGGTTTCAGCCCAAGGACGGTGTAGACACTCGCGCCACCTACA  Raphanus raphanistrum subsp. landra
EV536319       --> CCCATCCAGGTTTCAGCCCAAGGACGGTGTAGACACTCGCGCCACCTACA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY905413       --> CCCATCCAGGTTTCAGCCCAAGGACGGTGTAGACACTCGCGCCACCTACA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD563000       --> CCCTTCCAGGTTTCAGCCCAAGGACGGTGTAGACACTCGCGCCACTTACA  Raphanus sativus var. oleiformis
FD569093       --> CCCTTCCAGGTTTCAGCCCAAGGACGGTGTAGACACTCGCGCCACTTACA  Raphanus sativus cv Early Scarlet Globe
EX755877       --> CCCATCCAGGTTTCAGCCCAAGGACGGTGTAGACACTCGCGCCACCTACA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD541732       --> CCCATCCAGGTTTCAGCCCAAGGACGGTGTAGACACTCGCGCCACCTACA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD980971       --> CCCTTCCAGGTTTCAGCCCAAGGACGGTGTAGACACTCGCGCCACCTACA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX755825       --> CCCATCCAGGTTTCAGCCCAAGGACTGTGTGGACACTCGCGCCACCTACA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW723067       --> CCCTTCCAGGTTTCAGCCCAAGGACGGTGTAGACACTCGCGCCACTTACA  Raphanus sativus cv Early Scarlet Globe
EX896257       --> ....TCCAGGTTTCAGCCCAAGGACGGTGTAGACACTCGCGCCACTTACA  Raphanus sativus cv Early Scarlet Globe

               201    -    251
UN13134        --> GCCTTAACCCTGACGGCACGGTTAAAGTCTTGAACGAGACGTGGAACGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532254       <-- GCCTTAACCCTGACGGCACGGTTAAAGTCTTGAACGAGACGTGGAACGGA
EX900202       <-- GCCTTAACCCTGACGGCACGGTTAAAGTCTTGAACGGGACGTGGAACGGA
EV573593       <-- GCCTTAACCCTGACGGCACGGTTAAAGTCTTGAACGAGACGTGGAACGGA
EV540795       <-- GCCTTAACCCTGACGGCACGGTTAAAGTCTTGAACGAGACGTGGAACGGA
EY901856       <-- GCCTTAACCCTGACGGCACGGTTAAAGTCTTGAACGAGACGTGGAACGGA
EW727942       <-- GCCTTAACCCTGACGGCACGGTTAAAGTCTTGAACGAGACGTGGAACGGA
FD573357       <-- GCCTTAACCCTGACGGCACGGTTAAAGTCTTGAACGAGACGTGGAACGGA
EX761217       <-- GCCTTAACCCTGACGGCACGGTTAAAGTCTTGAACGAGACGTGGAACGGA
FD976773       <-- GCCTTAACCCTGACGGCACGGTTAAAGTCTTGAACGAGACGTGGAACGGA
EX759806       <-- GCCTTAACCCTGACGGCACGGTTAAAGTCTTGAACGAGACGTGAAACGGA
FD537953       <-- GCCTTAACCCTGACGGCACGGTTAAAGTCTTGAACGAGACGTGGAACGGA
FD960983       <-- GCCTTAACCCTGACGGCACGGTTAAAGTCTTGAACGAGACGTGGAACGGA
EX774565       <-- GCCTTAACCCTGACGGCACGGTTAAAGTCTTGAACGAGACGTGGAACGGA
EY934043       <-- .........................................TGGAACGGA
EV528198       --> GCCTTAACCCTGACGGCACGGTTAAAGTCTTGAACGAGACGTGGAACGGA
EV568984       --> GCCTTAACCCTGACGGCACGGTTAAAGTCTTGAACGAGACGTGGAACGGA
EX757696       --> GCCTTAACCCTGACGGCACGGTTAAAGTCTTGAACGAGACGTGGAACGGA
EX770359       --> GCCTTAACCCTGACGGCACGGTTAAAGTCTTGAACGAGACGTGGAACGGA
EY937793       --> GCCTTAACCCTGACGGCACGGTTAAAGTCTTGAACGAGACGTGGAACGGA
FD965163       --> GCCTTAACCCTGACGGCACGGTTAAAGTCTTGAACGAGACGTGGAACGGA
EV568887       --> GCCTTAACCCTGACGGCACGGTTAAAGTCTTGAACGAGACGTGGAACGGA
EV536319       --> GCCTTAACCCTGACGGCACGGTTAAAGTCTTGAACGAGACGTGGAACGGA
EY905413       --> GCCTTAACCCTGACGGCACGGTTAAAGTCTTGAACGAGACGTGGAACGGA
FD563000       --> GCCTTAACCCTGACGGCACGGTTAGAGTCTTGAACGAGACGTGGAACGGA
FD569093       --> GCCTTAACCCTGACGGCACGGTTAAAGTCTTGAACGAGACGTGGAACGGA
EX755877       --> GCCTTAACCCTGACGGCACGGTTAAAGTCTTGAACGAGACGTGGAACGGA
FD541732       --> GCCTTAACCCTGACGGCACGGTTAAAGTCTTGAACGAGACGTGGAACGGA
FD980971       --> GCCTTAACCCTGACGGCACGGTTAAAGTCTTGAACGAGACGTGGAACGGA
EX755825       --> GCCTTAACCCTGACGGCACGGTTAAAGTCTTGAACGAGACGTGAAACGGA
EW723067       --> GCCTTAACCCTGACGGCACGGTTAAAGTCTTGAACGAGACGTGGAACGGA
EX896257       --> GCCTTAACCCTGACGGCACGGTTAAAGTCTTGAACGGGACGTGGAACGGA

               251    -    301
UN13134        --> GGCAAGAGAGGTTTCATCCAAGG-CTCAGCTTTCAAAACTGATCCTAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532254       <-- GGCAAGAGAGGTTTCATCCAAGG-CTCAGCTTTCAAAACTGATCCTAAGA  Raphanus raphanistrum subsp. maritimus
EX900202       <-- GGCAAGAGAGGTTTCATCCAAGG-CTCAGCTTTCAAAACTGATCCTTAGA  Raphanus sativus cv Early Scarlet Globe
EV573593       <-- GGCAAGAGAGGTTTCATCCAAGG-GTCAGCCTTCAAAACTGATCCTAAGA  Raphanus raphanistrum subsp. landra
EV540795       <-- GGCAAGAGAGGTTTCATCCAAGG-CTCAGCCTTCAAAACTGATCCTAAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY901856       <-- GGCAAGAGAGGTTTCATCCAAGG-CTCAGCCTTCAAAACTGATCCTAAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW727942       <-- GGCAAGAGAGGTTTCATCCAAGG-CTCAGCTTTCAAAACTGATCCTAAGA  Raphanus sativus cv Early Scarlet Globe
FD573357       <-- GGCAAGAGAGGTTTCATCCAAGG-CTCAGCTTTCAAAACTGATCCTAAGA  Raphanus sativus cv Early Scarlet Globe
EX761217       <-- GGCAAGAGAGGTTTCATCCAAGG-CTCAGCCTTCAAAACTGATCCTAAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD976773       <-- GGCAAGAGAGGTTTCATCCAAGG-GTCAGCTTTCAAAACTGATCCTAAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX759806       <-- GGCAAGAGAGGTTTCATCCAAGG-GTCAGCTTTCAAAACTGATCCTAAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD537953       <-- GGCAAGAGAGGTTTCATCCAAGG-CTCAGCCTTCAAAACTGATCCTAAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD960983       <-- GGCAAGAGAGGTTTCATCCAAGG-GTCAGCTTTCAAAACTGATCCTAAGA  Raphanus raphanistrum subsp. maritimus
EX774565       <-- GGCAAGAGAGGTTTCATCCAAGG-GTCAGCTTTCAAAACTGATCCTAAGA  Raphanus raphanistrum subsp. landra
EY934043       <-- GGCAAGAGAGGTTTCATCCAAGG-CTCAGCTTTCAAAACTGATCCTAAGA  Raphanus sativus cv Early Scarlet Globe
EV528198       --> GGCAAGAGAGGTTTCATCCAAGG-CTCAGCTTTCAAAACTGATCCTAAGA  Raphanus raphanistrum subsp. maritimus
EV568984       --> GGCAAGAGAGGTTTCATCCAAGG-GTCAGCCTTCAAAACTGATCCTAAGA  Raphanus raphanistrum subsp. landra
EX757696       --> GGCAAGAGAGGTTTCATCCAAGG-CTCAGCCTTCAAAACTGATCCTAAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX770359       --> GGCAAGAGAGGTTTCATCCAAGG-GTCAGCTTTCAAAACTGATCCTAAGA  Raphanus raphanistrum subsp. landra
EY937793       --> GGCAAGAGAGGTTTCATCCAAGG-CTCAGCTTTCAAAACTGATCCTAAGA  Raphanus sativus cv Early Scarlet Globe
FD965163       --> GGCAAGAGAGGTTTCATCCAAGG-GTCAGCTTTCAAAACTGATCCTAAGA  Raphanus raphanistrum subsp. maritimus
EV568887       --> GGCAAGAGAGGTTTCATCCAAGG-GTCAGCTTTCAAAACTGATCCTAAGA  Raphanus raphanistrum subsp. landra
EV536319       --> GGCAAGAGAGGTTTCATCCAAGG-CTCAGCCTTCAAAACTGATCCTAAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY905413       --> GGCAAGAGAGGTTTCATCCAAGG-CTCAGCCTTCAAAACTGATCCTAAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD563000       --> GGCAAGAGAGGTTTCATCCAAGG-CTCAGCTTTCAAAACTGATCCTAAGA  Raphanus sativus var. oleiformis
FD569093       --> GGCAAGAGAGGTTTCATCCAAGG-CTCAGCTTTCAAAACTGATCCTAAGA  Raphanus sativus cv Early Scarlet Globe
EX755877       --> GGCAAGAGAGGTTTCATCCAAGG-CTCAGCCTTCAAAACTGATCCTAAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD541732       --> GGCAAGAGAGGTTTCATCCAAGGGCTCAGCCTTCAAAACTGATCCTAAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD980971       --> GGCAAGAGAGGTTTCATCCAAGG-GTCAGCTTTCAAAACTGATCCTAAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX755825       --> GGCAAGAGAGGTTTCATCCAAGG-GTCAGCTTTCAAAACTGATCCTAAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW723067       --> GGCAAGAGAGGTTTCATCCAAGG-CTCAGCTTTCAAAACTGATCCTAAGA  Raphanus sativus cv Early Scarlet Globe
EX896257       --> GGCAAGAGAGGTTTCATCCAAGG-CTCAGCTTTCAAAACTGATCCTTAGA  Raphanus sativus cv Early Scarlet Globe

               301    -    351
UN13134        --> GCGATGAGGCAAAGTTTAAAGTCAGGTTCTACCTCCCTCCTTTCCTCCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532254       <-- GCGATGAGGCAAAGTTTAAAGTCAGGTTCTACCTCCCTCCTTTCCTCCCT  Raphanus raphanistrum subsp. maritimus
EX900202       <-- GCGATGAAGCAAAGTTCAAAGTCAGGTTCTACCTCCCTCCTTTCCTCCCT  Raphanus sativus cv Early Scarlet Globe
EV573593       <-- GCGATGAGGCAAAGTTTAAAGTCAGGTTCTACCTCCCTCCTTTCCTCCCT  Raphanus raphanistrum subsp. landra
EV540795       <-- GCGATGAGGCCAAGTTTAAAGTCAGGTTCTACCTCCCTCCTTTCCTCCCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY901856       <-- GCGATGAGGCCAAGTTTAAAGTCAGGTTCTACCTCCCTCCTTTCCTCCCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW727942       <-- GCGATGAAGCAAAGTTCAAAGTCAGGTTCTACCTCCCTCCTTTCCTCCCT  Raphanus sativus cv Early Scarlet Globe
FD573357       <-- GCGATGAAGCAAAGTTCAAAGTCAGGTTCTACCTCCCTCCTTTCCTCCCT  Raphanus sativus cv Early Scarlet Globe
EX761217       <-- GCGATGAGGCCAAGTTTAAAGTCAGGTTCTACCTCCCTCCTTTCCTCCCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD976773       <-- GCGATGAGGCAAAGTTTAAAGTCAGGTTCTACCTCCCTCCTTTCCTCCCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX759806       <-- GCGATGAGGCAAAGTTTAAAGTCAGGTTCTACCTCCCTCCTTTCCTACCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD537953       <-- GCTACGAGGCCAAGTTTAAAGTCAGGTTCTACCTCCCTCCTTTCCTCCCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD960983       <-- GCGATGAGGCAAAGTTTAAAGTCAGGTTCTACCTCCCTCCTTTCCTCCCT  Raphanus raphanistrum subsp. maritimus
EX774565       <-- GCGATGAGGCAAAGTTTAAAGTCAGGTTCTACCTCCCTCCTTTCCTCCCT  Raphanus raphanistrum subsp. landra
EY934043       <-- GCGATGAAGCAAAGTGCAAAGTCAGGTTCTACCTCCCTCCTTTCCTCCCT  Raphanus sativus cv Early Scarlet Globe
EV528198       --> GCGATGAGGCAAAGTTTAAAGTCAGGTTCTACCTCCCTCCTTTCCTCCCT  Raphanus raphanistrum subsp. maritimus
EV568984       --> GCGATGAGGCAAAGTTTAAAGTCAGGTTCTACCTCCCTCCTTTCCTCCCT  Raphanus raphanistrum subsp. landra
EX757696       --> GCGATGAGGCCAAGTTTAAAGTCAGGTTCTACCTCCCTCCTTTCCTCCCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX770359       --> GCGATGAGGCAAAGTTTAAAGTCAGGTTCTACCTCCCTCCTTTCCTCCCT  Raphanus raphanistrum subsp. landra
EY937793       --> GCGATGAAGCAAAGTGCAAAGTCAGGTTCTACCTCCCTCCTTTCCTCCCT  Raphanus sativus cv Early Scarlet Globe
FD965163       --> GCGATGAGGCAAAGTTTAAAGTCAGGTTCTACCTCCCTCCTTTCCTCCCT  Raphanus raphanistrum subsp. maritimus
EV568887       --> GCGATGAGGCAAAGTTTAAAGTCAGGTTCTACCTCCCTCCTTTCCTCCCT  Raphanus raphanistrum subsp. landra
EV536319       --> GCGATGAGGCCAAGTTTAAAGTCAGGTTCTACCTCCCTCCTTTCCTCCCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY905413       --> GCGATGAGGCCAAGTTTAAAGTCAGGTTCTACCTCCCTCCTTTCCTCCCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD563000       --> GCGATGAAGCAAAGTTCAAAGTCAGGTTCTACCTCCCTCCTTTCCTCCCT  Raphanus sativus var. oleiformis
FD569093       --> GCGATGAAGCAAAGTTCAAAGTCAGGTTCTACCTCCCTCCTTTCCTCCCT  Raphanus sativus cv Early Scarlet Globe
EX755877       --> GCGATGAGGCCAAGTTTAAAGTCAGGTTCTACCTCCCTCCTTTCCTCCCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD541732       --> GCTACGAGGCCAAGTTTAAAGTCAGGTTCT....................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD980971       --> GCGATGAGGCAAAGTTTAAAGTCAGGTTCTACCTCCCTCCTTTCCTCCCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX755825       --> GCGATGAGGCAAAGTTTAAAGTCAGGTTCTACCTCCCTCCTTTCCTACCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW723067       --> GCGATGAAGCAAAGTTCAAAGTCAGGTTCTACCTCCCTCCTTTCCTCCCT  Raphanus sativus cv Early Scarlet Globe
EX896257       --> GCGATGAAGCAAAGTTCAAAGTCAGGTTCTACCTCCCTCCTTTCCTCCCT  Raphanus sativus cv Early Scarlet Globe

               351    -    401
UN13134        --> ATCATTCCCGTTACCGGTGATTACTGGGTGCTGTACATAGATCCTGAGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532254       <-- ATCATTCCCGTTACCGGTGATTACTGGGTGCTGTACATAGATCCTGAGTA  Raphanus raphanistrum subsp. maritimus
EX900202       <-- ATCATTCCCGTTACCGGTGATTACTGGGTGCTGTATATAGATCCTGAGTA  Raphanus sativus cv Early Scarlet Globe
EV573593       <-- ATCATCCCCGTTACCGGTGATTACTGGGTGCTGTACATAGATCCTGAGTA  Raphanus raphanistrum subsp. landra
EV540795       <-- ACCATTCCCGTTACCGGTGATTACTGGGTGCTGTACATAGATCCTGAGTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY901856       <-- ATCATTCCCGTTACCGGTGATTACTGGGTGCTGTACATAGATCCTGAGTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW727942       <-- ATCATTCCCGTTACCGGTGATTACTGGGTGCTGTATATAGATCCTGAGTA  Raphanus sativus cv Early Scarlet Globe
FD573357       <-- ATCATTCCCGTTACCGGTGATTACTGGGTGCTGTATATAGATCCTGAGTA  Raphanus sativus cv Early Scarlet Globe
EX761217       <-- ATCATTCCCGTTACCGGTGATTACTGGGTGCTGTACATAGATCCTGAGTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD976773       <-- ATCATTCCCGTTACCGGTGATTACTGGGTGCTGTACATAGATCCTGAGTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX759806       <-- ATCATTCCTGTTACCGGTGATTACTGGGTGCTGTATATAGATCCTGAGTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD537953       <-- ATCATTCCCGTTACCGGTGATTACTGGGTGCTGTACATAGATCCTGAGTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD960983       <-- ATCATTCCCGTTACCGGTGATTACTGGGTGCTGTACATAGATCCTGAGTA  Raphanus raphanistrum subsp. maritimus
EX774565       <-- ATCATCCCCGTTACCGGTGATTACTGGGTGCTGTACATAGATCCTGAGTA  Raphanus raphanistrum subsp. landra
EY934043       <-- ATCATTCCCGTTACCGGTGATTACTGGGTGCTGTATATAGATCCTGAGTA  Raphanus sativus cv Early Scarlet Globe
EV528198       --> ATCATTCCCGTTACCGGTGATTACTGGGTGCTGTACATAGATCCTGAGTA  Raphanus raphanistrum subsp. maritimus
EV568984       --> ATCATCCCCGTTACCGGTGATTACTGGGTGCTGTACATAGATCCTGAGTA  Raphanus raphanistrum subsp. landra
EX757696       --> ATCATTCCCGTTACCGGTGATTACTGGGTGCTGTACATAGATCCTGAGTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX770359       --> ATCATCCCCGTTACCGGTGATTACTGGGTGCTGTACATAGATCCTGAGTA  Raphanus raphanistrum subsp. landra
EY937793       --> ATCATTCCCGTTACCGGTGATTACTGGGTGCTGTATATAGATCCTGAGTA  Raphanus sativus cv Early Scarlet Globe
FD965163       --> ATCATTCCCGTTACCGGTGATTACTGGGTGCTGTACATAGATCCTGAGTA  Raphanus raphanistrum subsp. maritimus
EV568887       --> ATCATCCCCGTTACCGGTGATTACTGGGTGCTGTACATAGATTCTGAGTA  Raphanus raphanistrum subsp. landra
EV536319       --> ACCATTCCCGTTACCGGTGATTACTGGGTGCTGTACATAGATCCTGAGTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY905413       --> ATCATTCCCGTTACCGGTGATTACTGGGTGCTGTACATAGATCCTGAGTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD563000       --> ATCATTCCCGTTACCGGTGATTACTGGGTGCTGTACATAGATCCTGAGTA  Raphanus sativus var. oleiformis
FD569093       --> ATCATTCCCGTTACCGGTGATTACTGGGTGCTGTATATAGATCCTGAGTA  Raphanus sativus cv Early Scarlet Globe
EX755877       --> ATCATTCCCGTTACCGGTGATTACTGGGTGCTGTACATAGATCCTGAGTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD541732       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD980971       --> ATCATTCCCGTTACCGGTGATTACTGGGTGCTGTACATAGATCCTGAGTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX755825       --> ATCATTCCTGTTACCGGTGATTACTGGGTGCTGTATATAGATCCTGAGTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW723067       --> ATCATTCCCGTTACCGGTGATTACTGGGTGCTGTATATAGATCCTGAGTA  Raphanus sativus cv Early Scarlet Globe
EX896257       --> ATCATTCCCGTTACCGGTGATTACTGGGTGCTGTATATAGATCCTGAGTA  Raphanus sativus cv Early Scarlet Globe

               401    -    451
UN13134        --> CCAGCATGCTGTCATTGGGCAGCCTTCGAGGAGTTATCTCTGGATCCTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532254       <-- CCAGCATGCGGTCATTGGGCAGCCTTCCAGGAGTTATCTCTGGATCCTGA  Raphanus raphanistrum subsp. maritimus
EX900202       <-- CCAGCATGCTGTCATTGGGCAGCCTTCGAGGAGTTATTTCTGGATCCTGA  Raphanus sativus cv Early Scarlet Globe
EV573593       <-- CCAGCATGCCGTCATTGGGCAGCCTTCGAGGAGTTATCTTTGGATCCTGA  Raphanus raphanistrum subsp. landra
EV540795       <-- CCAGCATGCTGTCATTGGGCAGCCTTCGAGGAGTTA..............  Raphanus raphanistrum subsp. raphanistrum (MS)
EY901856       <-- CCAGCATGCTGTCATTGGGCAGCCTTCGAGGAGTTATCTCTGGATCCTGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW727942       <-- CCAGCATGCTGTCATTGGGCAGCCTTCGAGGAGTTATCTTTGGATCCTGA  Raphanus sativus cv Early Scarlet Globe
FD573357       <-- CCAGCATGCTGTCATTGGGCAGCCTTCGAGGAGTTATCTCTGGGTCCTGA  Raphanus sativus cv Early Scarlet Globe
EX761217       <-- CCAGCATGCTGTCATTGGGCAGCCTTCGAGGAGTTATTTTTGGATCCTGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD976773       <-- CCAGCATGCGGTCATTGGGCAGCCTTCCAGGAGTTATCTCTGGATCCTGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX759806       <-- CCAGCATGCTGTCATCGGGCAGCCTTCAAGGAGTTATCTCTGGATCCTGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD537953       <-- CCAGCATGCTGTCATTGGGCAGCCTTCGAGGAGTTATCTCTTGATCCTGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD960983       <-- CCAGCATGCGGTCATTGGGCAGCCTTCCAGGAGTTATTTTTGGATCCTGA  Raphanus raphanistrum subsp. maritimus
EX774565       <-- CCAGCATGCCGTCATTGGGCAGCCTTCGAGGAGTTATCTCTGGATCCTGA  Raphanus raphanistrum subsp. landra
EY934043       <-- CCAGCATGCTGTCATTGGGCAGCCTTCGAGGAGTTATCTCTGGATCCTGA  Raphanus sativus cv Early Scarlet Globe
EV528198       --> CCAGCATGCGGTCATTGGGCAGCCTTCCAGGAGTTATCTCTGGATCCTGA  Raphanus raphanistrum subsp. maritimus
EV568984       --> CCAGCATGCCGTCATTGGGCAGCCTTCGAGGAGTTATCTCTGGATCCTGA  Raphanus raphanistrum subsp. landra
EX757696       --> CCAGCATGCTGTCATTGGGCAGCCTTCGAGGAGTTATCTCTGGATCCTGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX770359       --> CCAGCATGCCGTCATTGGGCAGCCTTCGAGGAGTTATCTCTGGATCCTGA  Raphanus raphanistrum subsp. landra
EY937793       --> CCAGCATGCTGTCATTGGGCAGCCTTCGAGGAGTTATCTCTGGATCCTGA  Raphanus sativus cv Early Scarlet Globe
FD965163       --> CCAGCATGCGGTCATTGGGCAGCCTTCCAGGAGTTATCTCTGGATCCTGA  Raphanus raphanistrum subsp. maritimus
EV568887       --> CCAGCATGCCGTCATTGGGCAGCCTTCGAGGAGTTATCTCTGGATCCTGA  Raphanus raphanistrum subsp. landra
EV536319       --> CCAGCATGCTGTCATTGGGCAGCCTTCGAGGAGTTATCTCTGGATCCTGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY905413       --> CCAGCATGCTGTCATTGGGCAGCCTTCGAGGAGTTATCTCTGGATCCTGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD563000       --> CCAGCATGCGGTCATTGGGCAGCCTTCGAGGAGTTATCTCTGGATCCTGA  Raphanus sativus var. oleiformis
FD569093       --> CCAGCATGCTGTCATTGGGCAGCCTTCGAGGAGTTATCTCTGGGTCCTGA  Raphanus sativus cv Early Scarlet Globe
EX755877       --> CCAGCATGCTGTCATTGGGCAGCCTTCGAGGAGTTATCTCTGGATCCTGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD541732       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD980971       --> CCAGCATGCGGTCATTGGGCAGCCTTCCAGGAGTTATCTCTGGATCCTGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX755825       --> CCAGCATGCTGTCATCGGGCAGCCTTCAAGGAGTTATCTCTGGATCCTGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW723067       --> CCAGCATGCTGTCATTGGGCAGCCTTCGAGGAGTTATCTCTGGATCCTGA  Raphanus sativus cv Early Scarlet Globe
EX896257       --> CCAGCATGCTGTCATTGGGCAGCCTTCGAGGAGTTATCTCTGGATCCTGA  Raphanus sativus cv Early Scarlet Globe

               451    -    501
UN13134        --> GCAGGACGGCGCATGTGGAGGAAGAGACATACAAGGAGCTGGTGGAGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532254       <-- GCAGGACGGCGCATGTGGAGGAAGAGACATACAAGGAGCTGGTGGAGAAG
EX900202       <-- GCAGGACGGCGCATGTGGAGGAAGAGACATACAAGGAGCTGGTGGAGAAG
EV573593       <-- GCAGGACGGCGCATGTGGAGGAAGATACATACAAGGAGCTGGTGGAGAAG
EV540795       <-- ..................................................
EY901856       <-- GCAGGACGGCGCATGTGGAGGAAGAGACATACAAGGAGCTGGTGGAGAAG
EW727942       <-- GCAGGACGGCGCATGTGGAGGAAGAGACATACAAGGAGCTGGTGGAGAAG
FD573357       <-- GCAGGACGGCGCATGTGGAGGAAGAGACATACAAGGAGCTGGTGGAGAAG
EX761217       <-- GCAGGACGGCGCATGTGGAGGAAGAGACATACAAGGAGCTGGTGGAGAAG
FD976773       <-- GCAGGACGGCGCATGTGGAGGAAGAGACATACAAGGAGCTGGTGGAGAAG
EX759806       <-- GCAGGACGGCGCATGTGGAGGAAGAGACATACAAGGAGCTGGTGGAGAAG
FD537953       <-- GCAGGACGGCGCATGTGGAGGAAGAGACATACAAGGAGCTGGTGGAGAAG
FD960983       <-- GCAGGACGGGGCATGTGGAGGAAGAGACATACAAGGAGCTGGTGGAGAAG
EX774565       <-- GCAGGACGGCGCATGTGGAGGAAGAGACATACAAGGAGCTGGTGGAGAAG
EY934043       <-- GCAGGACGGCGCATGTGGAGGAAGAGACATACAAGGAGCTGGTGGAGAAG
EV528198       --> GCAGGACGGCGCATGTGGAGGAAGAGACATACAAGGAGCTGGTGGAGAAG
EV568984       --> GCAGGACGGCGCATGTGGAGGAAGATACATACAAGGAGCTGGTGGAGAAG
EX757696       --> GCAGGACGGCGCATGTGGAGGAAGAGACATACAAGGAGCTGGTGGAGAAG
EX770359       --> GCAGGACGGCGCATGTGGAGGAAGAGACATACAAGGAGCTGGTGGAGAAG
EY937793       --> GCAGGACGGCGCATGTGGAGGAAGAGACATACAAGGAGCTGGTGGAGAAG
FD965163       --> GCAGGACGGCGCATGTGGAGGAAGAGACATACAAGGAGCTGGTGGAGAAG
EV568887       --> GCAGGACGGCGCATGTGGAGGAAGAGACATACAAGGAGCTGGTGGAGAAG
EV536319       --> GCAGGACGGCGCATGTGGAGGAAGAGACATACAAGGAGCTGGTGGAGAAG
EY905413       --> GCAGGACGGCGCATGTGGAGGAAGAGACATACAAGGAGCTGGTGGAGAAG
FD563000       --> GCAGGACGGCGCATGTGGAGGAAGAGACATACAAGGAGCTGGTGGAGAAG
FD569093       --> GCAGGACGGCGCATGTGGAGGAAGAGACATACAAGGAGCTGGTGGAGAAG
EX755877       --> GCAGGACGGCGCATGTGGAGGAAGAGACATACAAGGAGCTGGTGGAGAAG
FD541732       --> ..................................................
FD980971       --> GCAGGACGGCGCATGTGGAGGAAGAGACATACAAGGAGCTGGTGGAGAAG
EX755825       --> GCAGGACGGCGCATGTGGAGGAAGAGACATACAAGGAGCTGGTGGAGAAG
EW723067       --> GCAGGACGGCGCATGTGGAGGAAGAGACATACAAGGAGCTGGTGGAGAAG
EX896257       --> GCAGGACGGCGCATGTGGAGGAAGAGACATACAAGGAGCTGGTGGAGAAG

               501    -    551
UN13134        --> GCGGTGGAGCAAGGGTATGACGTCAGCAAGCTTCACAAGACTCCTCAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532254       <-- GCGGTGGAGCAAGGGTATGACGTCAGCAAACTTCACAAGACTCCTCAGAG  Raphanus raphanistrum subsp. maritimus
EX900202       <-- GCGGTGGAGCAAGGGTATGACGTCAGCAAGCTTCACAAGACTCCTCAGAG  Raphanus sativus cv Early Scarlet Globe
EV573593       <-- GCGGTGGAGCAAGGGTATGACGTCAACAAGCTTCACAAGACCCCTCAGAG  Raphanus raphanistrum subsp. landra
EV540795       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY901856       <-- GCGGTGGAGCAAGGGTATGACGTCAGCAAGCTTCACAAGACTCCTCAGAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EW727942       <-- GCGGTGGAGCAAGGGTATGACGTCAGCAAGCTTCACAAGACTCCTCAGAG  Raphanus sativus cv Early Scarlet Globe
FD573357       <-- GCGGTGGAGCAAGGGTATGACGTCAGCAAGCTTCACAAGACTCCTCAGAG  Raphanus sativus cv Early Scarlet Globe
EX761217       <-- GCGGTGGAGCAAGGGTATGACGTCAGCAAGCTTCACAAGACTCCTCAGAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD976773       <-- GCGGTGGAGCAAGGGTATGACGTCAGCAAACTTCACAAGACTCCTCAGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX759806       <-- GCGGTGGAGCAAGGGTATGACGTCAGCAAGCTTCACAAGACTCCTCAGAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD537953       <-- GCGGTGGAGCAAGGGTATGACGTCAGCAAGCTTCACAAGACTCCTCAGAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD960983       <-- GCGGTGGAGCAAGGGTATGACGTCAGCAAACTTCACAAGACTCCTCAGAG  Raphanus raphanistrum subsp. maritimus
EX774565       <-- GCGGTGGAGCAAGGGTATGACGTCAACAAGCTTCACAAGACCCCTCAGAG  Raphanus raphanistrum subsp. landra
EY934043       <-- GCGGTGGAGCAAGGGTATGACGTCAGCAAGCTTCACAAGACTCCTCAGAG  Raphanus sativus cv Early Scarlet Globe
EV528198       --> GCGGTGGAGCCAGGGTATGACGTCAGCAAACTTCACAAGACTCCTCAGAG  Raphanus raphanistrum subsp. maritimus
EV568984       --> GCGGTGGAGCAAGGGTATGACGTCAACAAGCTTCACAAGACCCCTCAGAG  Raphanus raphanistrum subsp. landra
EX757696       --> GCGGTGGAGCAAGGGTATGACGTCAGCAAGCTTCACAAGACTCCTCAGAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX770359       --> GCGGTGGAGCAAGGGTATGACGTCAACAAGCTTCACAAGACCCCTCAGAG  Raphanus raphanistrum subsp. landra
EY937793       --> GCGGTGGAGCAAGGGTATGACGTCAGCAAGCTTCACAAGACTCCTCAGAG  Raphanus sativus cv Early Scarlet Globe
FD965163       --> GCGGTGGAGCAAGGGTATGACGTCAGCAAACTTCACAAGACTCCTCAGAG  Raphanus raphanistrum subsp. maritimus
EV568887       --> GCGGTGGAGCAAGGGTATGACGTCAACAAGCTTCACAAGACCCCTCAGAG  Raphanus raphanistrum subsp. landra
EV536319       --> GCGGTGGAGCAAGGGTATGACGTCAGCAAGCTTCACAAGACTCCTCAGAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY905413       --> GCGGTGGAGCAAGGGTATGACGTCAGCAAGCTTCACAAGACTCCTCAGAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD563000       --> GCGGTGGAACAAGGGTATGACGTCAGCAAGCTTCACAAGACTCCTCAGAG  Raphanus sativus var. oleiformis
FD569093       --> GCGGTGGAGCAAGGGTATGACGTCAGCAAGCTTCACAAGACTCCTCAGAG  Raphanus sativus cv Early Scarlet Globe
EX755877       --> GCGGTGGAGCAAGGGTATGACGTCAGCAAGCTTCACAAGACTCCTCAGAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD541732       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD980971       --> GCGGTGGAGCAAGGGTATGACGTCAGCAAACTTCACAAGACTCCTCAGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX755825       --> GCGGTGGAGCAAGGGTATGACGTCAGCAAGCTTCACAAGACTCCTCAGAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EW723067       --> GCGGTGGAGCAAGGGTATGACGTCAGCAAGCTTCACAAGACTCCTCAGAG  Raphanus sativus cv Early Scarlet Globe
EX896257       --> GCGGTGGAGCAAGGGTATGACGTCAGCAAGCTTCACAAGACTCCTCAGAG  Raphanus sativus cv Early Scarlet Globe

               551    -    601
UN13134        --> TGACACACCACCTGAGTCCAACGCTGCTCCTGATGACACCAAGGGCATCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532254       <-- TGACGCACCACCCGAGTCCAACGCTGCTCCTGATGACACCAAGGGCATTT  Raphanus raphanistrum subsp. maritimus
EX900202       <-- TGACACACCACCCGAGTCAAACGCTGCTCCTGATGACACCAAGGGCATCT  Raphanus sativus cv Early Scarlet Globe
EV573593       <-- TGACACACCACCTGAGGCCAACGCTGCTCCTGATGACACCAAGGGCATCT  Raphanus raphanistrum subsp. landra
EV540795       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY901856       <-- TGACACACCACCTGAGTCCAACGCTGCTCCTGATGACACCAAGGGCATCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW727942       <-- TGACACACCACCCGAGTCAAACGCTGCTCCTGATGACACCAAGGGCATCT  Raphanus sativus cv Early Scarlet Globe
FD573357       <-- TGACACACCACCCGAGTCAAACGCTGCTCCTGATGACACCAAGGGCATCT  Raphanus sativus cv Early Scarlet Globe
EX761217       <-- TGACACACCACCTGAGTCCAACGCTGCTCCTGATGACACCAAGGGCATCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD976773       <-- TGACACACCACCTGAGTCCAACGCTGCTCCTGATGACACCAAGGGCATCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX759806       <-- TGACGCACCACCTGAGTCCAACGCTGCTCCTGATGACACCAAGGGCATTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD537953       <-- TGACACACCACCTGAGTCCAACGCTGCTCCTGATGACACCAAGGGCATCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD960983       <-- TGACACACCACCTGAGTCCAACGCTGCTCCTGATGACACCAAGGGCATTT  Raphanus raphanistrum subsp. maritimus
EX774565       <-- TGACACACCACCTGAGGCCAACGCTGCTCCTGATGACACCAAGGGCATCT  Raphanus raphanistrum subsp. landra
EY934043       <-- TGACACACCACCCGAGTCAAACGCTGCTCCTGATGACACCAAGGGCATCT  Raphanus sativus cv Early Scarlet Globe
EV528198       --> TGACGCACCACCCGAGTCCAACGCTGCTCCTGATGACACCAAGGGCATTT  Raphanus raphanistrum subsp. maritimus
EV568984       --> TGACACACCACCTGAGGCCAACGCTGCTCCTGATGACACCAAGGGCATCT  Raphanus raphanistrum subsp. landra
EX757696       --> TGACACACCACCTGAGTCCAACGCTGCTCCTGATGACACCAAGGGCATCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX770359       --> TGACACACCACCTGAGGCCAACGCTGCTCCTGATGACACCAAGGGCATCT  Raphanus raphanistrum subsp. landra
EY937793       --> TGACACACCACCCGAGTCAAACGCTGCTCCTGATGACACCAAGGGCATCT  Raphanus sativus cv Early Scarlet Globe
FD965163       --> TGACACACCACCTGAGTCCAACGCTGCTCCTGATGACACCAAGGGCATCT  Raphanus raphanistrum subsp. maritimus
EV568887       --> TGACACACCACCTGAGGCCAACGCTGCTCCTGATGACACCAAGGGCATCT  Raphanus raphanistrum subsp. landra
EV536319       --> TGACACACCACCTGAGTCCAACGCTGCTCCTGATGACACCAAGGGCATCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY905413       --> TGACACACCACCTGAGTCCAACGCTGCTCCTGATGACACCAAGGGCATCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD563000       --> TGACGCACCACCCGAGTCCAACGCTGCTCCTGATGACACCAAGGGCATCT  Raphanus sativus var. oleiformis
FD569093       --> TGACACACCACCCGAGTCAAACGCTGCTCCTGATGACACCAAGGGCATCT  Raphanus sativus cv Early Scarlet Globe
EX755877       --> TGACACACCACCTGAGTCCAACGCTGCTCCTGATGACACCAAGGGCATCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD541732       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD980971       --> TGACACACCACCTGAGTCCAACGCTGCTCCTGATGACACCAAGGGCATCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX755825       --> TGACGCACCACCTGAGTCCAACGCTGCTCCTGATGACACCAAGGGCATTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW723067       --> TGACACACCACCCGAGTCAAACGCTGCTCCTGATGACACCAAGGGCATCT  Raphanus sativus cv Early Scarlet Globe
EX896257       --> TGACACACCACCCGAGTCAAACGCTGCTCCTGATGACACCAAGGGCATCT  Raphanus sativus cv Early Scarlet Globe

               601    -    651
UN13134        --> GGTGGCTCAAATCTATCTTTGGCAAATAGTTTATAGAAAAACACAA-GAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532254       <-- GGTGGCTCAAATCTATCTTTGGCAAATAGTTTATAGAAAAACACAA-GAC  Raphanus raphanistrum subsp. maritimus
EX900202       <-- GGTGGCTCAAATCTATCTTTGGCAAATAGTTTATAGAAAAACACAA-GAC  Raphanus sativus cv Early Scarlet Globe
EV573593       <-- GGTGGCTCAAATCTATCTTTGGCAAATAGTTTATAGAAAAACACAA-GAC  Raphanus raphanistrum subsp. landra
EV540795       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY901856       <-- GGTGGCTCAAATCTATCTTTGGCAAATAGTTTATAGAAAAACACAAAGAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EW727942       <-- GGTGGCTCAAATCTATCTTTGGCAAATAGTTTATAGAAAAACACAA-GAC  Raphanus sativus cv Early Scarlet Globe
FD573357       <-- GGTGGCTCAAATCTATCTTTGGCAAATAGTTTATAGAAAAACACAA-GAC  Raphanus sativus cv Early Scarlet Globe
EX761217       <-- GGTGGCTCAAATCTATCTTTGGCAAATAGTTTATAGAAAAACACAAAGAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD976773       <-- GGTGGCTCAAATCTATCTTTGGCAAATAGTTTATAGAAAAACACAAAGAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX759806       <-- GGTGGCTCAAATCTATCTTTGGCAAATAGTTTATAGAAAAACACAA-GAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD537953       <-- GGTGGCTCAAATCTATCTTTGGCAAATAGTTTATAGAAAAACACAAAGAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD960983       <-- GGTGGCTCAAATCTATTTTTGGCAAATAGTTTATAGAAAAACACAAAGAC  Raphanus raphanistrum subsp. maritimus
EX774565       <-- GGTGGCTCAAATCTATCTTTGGCAAATAGTTTATAGAAAAACACAA-GAC  Raphanus raphanistrum subsp. landra
EY934043       <-- GGTGGCTCAAATCTATCTTTGGCAAATAGTTTATAGAAAAACACAA-GAC  Raphanus sativus cv Early Scarlet Globe
EV528198       --> GGTGGCTCAAATCTATCTTTGGCAAATAGTTTATAGAAAAACACAA-GAC  Raphanus raphanistrum subsp. maritimus
EV568984       --> GGTGGCTCAAATCTATCTTTGGCAAATAGTTTATAGAAAAACACAA-GAC  Raphanus raphanistrum subsp. landra
EX757696       --> GGTGGCTCAAATCTATCTTTGGCAAATAGTTTATAGAAAA-CACAAAGAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX770359       --> GGTGGCTCAAATCTATCTTTGGCAAATAGTTTATAGAAAAACACAA-GAC  Raphanus raphanistrum subsp. landra
EY937793       --> GGTGGCTCAAATCTATCTTTGGCAAATAGTTTATAGAAAAACACAA-GAC  Raphanus sativus cv Early Scarlet Globe
FD965163       --> GGTGGCTCAAATCTATCTTTGGCAAATAGTTTATAGAAAAACACAAAGAC  Raphanus raphanistrum subsp. maritimus
EV568887       --> GGTGGCTCAAATCTATCTTTGGCAAATAGTTTATAGAAAAACACAA-GAC  Raphanus raphanistrum subsp. landra
EV536319       --> GGTGGCTCAAATCTATCTTTGGCAAATAGTTTATAGAAAAACACAAAGAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY905413       --> GGTGGCTCAAATCTATCTTTGGCAAATAGTTTATAGAAAAACACAAAGAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD563000       --> GGTGGCTCAAATCTATCTTTGGCAAATAGTTTATAGAAAAACACAA-GAC  Raphanus sativus var. oleiformis
FD569093       --> GGTGGCTCAAATCTATCTTTGGCAAATAGTTTATAGAAAAACACAA-GAC  Raphanus sativus cv Early Scarlet Globe
EX755877       --> GGTGGCTCAAATCTATCTTTGGCAAATAGTTTATAGAAAA-CACAAAGAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD541732       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD980971       --> GGTGGCTCAAATCTATCTTTGGCAAATAGTTTATAGAAAAACACAAAGAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX755825       --> GGTGGCTCAAATCTATCTTTGGCAAATAGTTTATAGAAAAACACAA-GAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EW723067       --> GGTGGCTCAAATCTATCTTTGGCAAATAGTTTATAGAAAAACACAA-GAC  Raphanus sativus cv Early Scarlet Globe
EX896257       --> GGTGGCTCAAATCTATCTTTGGCAAATAGTTTATAGAAAAACACAA-GAC  Raphanus sativus cv Early Scarlet Globe

               651    -    701
UN13134        --> TTGTTTCCACCTCCTTTTACTTCCCTT---T-GTCTGTGTAA-CATACT-
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532254       <-- TTGTGTCCACCTCCTTTTACTTCCCTT---T-GTCTGTGTAA-CATACT-  Raphanus raphanistrum subsp. maritimus
EX900202       <-- TTGTTTCCACTTCCTTTTACTTCCCTT---T-GTCTGTGTAA-TATACT-  Raphanus sativus cv Early Scarlet Globe
EV573593       <-- TTGTTTCCACCTCCTTTCACTTCCCTT---T-GTCTGTGTAA-CATACT-  Raphanus raphanistrum subsp. landra
EV540795       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY901856       <-- TTGTTTCCACCTCCTTTTACTTCTCTT---T-GTCTGTGTAA-CATACTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EW727942       <-- TTGTTTCCACTTCCTTTTACTTCCCTT---T-GTCTGTGTAA-TATACT-  Raphanus sativus cv Early Scarlet Globe
FD573357       <-- TTGTTTCCACTTCCTTTTACTTCCCTT---T-GTCTGTGTAA-TATACT-  Raphanus sativus cv Early Scarlet Globe
EX761217       <-- TTGTTTCCACCTCCTTTTACTTCCCTT---T-GTCTGTGTAA-CATACTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD976773       <-- TTGTTTCCACCTCCTTTTACTTCCCTT---T-GTCTGTGTAA-CATACT-  Raphanus raphanistrum subsp. raphanistrum (NY)
EX759806       <-- TTGTTTCCACCTCCTTTTACTTCCTTTGTCT-GTCTGTGTAAACATACT-  Raphanus raphanistrum subsp. raphanistrum (MS)
FD537953       <-- TTGTTTCCACCTCCTTTTACTTCCCTT---T-GTCTGTGTAA-CATACTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD960983       <-- TTGTTTCCACCTCCTTTTACTTCCCTT---T-GTCTGTGTAA-CATACT-  Raphanus raphanistrum subsp. maritimus
EX774565       <-- TTGTTTCCACCTCCTTTTACTTCCCTT---T-GTCTGTGTAA-CATACT-  Raphanus raphanistrum subsp. landra
EY934043       <-- TTGTTTCCACTTCCTTTTACTTCCCTT---T-GTCTGTGTAA-TATACT-  Raphanus sativus cv Early Scarlet Globe
EV528198       --> TTGTGTCCACCTCCTTTTACTTCCCTT---T-GTCTGTGTAA-CATACT-  Raphanus raphanistrum subsp. maritimus
EV568984       --> TTGTTTCCACCTCCTTTCACTTCCCTT---T-GTCTGTGTAA-CATACT-  Raphanus raphanistrum subsp. landra
EX757696       --> TTGTTTCCACCTCCTTTTACTTCCCTT---T-GTCTGTGTA--CATACTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX770359       --> TTGTTTCCACCTCCTTTTACTTCCCTT---T-GTCTGTGTAA-CATACT-  Raphanus raphanistrum subsp. landra
EY937793       --> TTGTTTCCACTTCCTTTTACTTCCCTT---T-GTCTGTGTAA-TATACT-  Raphanus sativus cv Early Scarlet Globe
FD965163       --> TTGTTTCCACCTCCTTTTACTTCCCTT---T-GTCTGTGTAA-CATACT-  Raphanus raphanistrum subsp. maritimus
EV568887       --> TTGTTTCCACCTCCTTTTACTTCCCTT---T-GTCTGTGTAA-CATACT-  Raphanus raphanistrum subsp. landra
EV536319       --> TTGTTTCCACCTCCCTTTACTTCCCTT---T-GTCTGTGTAA-CATACTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY905413       --> TTGTTTCCACCTCCTTTTACTTCTCTT---T-GTCTGTGTAA-CATACTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD563000       --> TTGTTTCCACCTCCTTTTACTTCCCTT---T-GTCTGTGTAA-CATACT-  Raphanus sativus var. oleiformis
FD569093       --> TTGTTTCCACTTCCTTTTACTTCCCTT---T-GTCTGTGTAA-TATACT-  Raphanus sativus cv Early Scarlet Globe
EX755877       --> TTGTTTCCACCTCCTTTTACTTCCCTT---T-GTCTGTGTAA-CATACTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD541732       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD980971       --> TTGTTTCCACCTCCTTTTACTTCCCTT---T-GTCTGTGTAA-CATACT-  Raphanus raphanistrum subsp. raphanistrum (NY)
EX755825       --> TTGTTTCCACCTCCTTTTACTTCCTTTGTCT-GTCTGTGTAA-CATACT-  Raphanus raphanistrum subsp. raphanistrum (MS)
EW723067       --> TTGTTTCCACTTCCTTTTACTTCCCTT---TTGTCTGTGTAA-TATACT-  Raphanus sativus cv Early Scarlet Globe
EX896257       --> TTGTTTCCACTTCCTTTTACTTCCCTT---T-GTCTGTGTAA-TATACT-  Raphanus sativus cv Early Scarlet Globe

               701    -    751
UN13134        --> -AC---CCCTTTTGTTTACTCCAGTGAACATCATCGTTTCTGCTTTTGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532254       <-- -AC---CCCTTTTGTTTACTCCAGTGAACATCATCGTTTCTGC.......  Raphanus raphanistrum subsp. maritimus
EX900202       <-- -ACTACCCCTTTTGTTT.................................  Raphanus sativus cv Early Scarlet Globe
EV573593       <-- -AC---CCCTTTTGTTTACTCCAGTGAACATCATCGTTTCTGCTTTTGTT  Raphanus raphanistrum subsp. landra
EV540795       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY901856       <-- TAC---CCCTTTTGTTTACTCCAGTGAACATCATCGTTTCTGCTTTTGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW727942       <-- -ACTACCCCTTTTGTTTACTCCAGTGAACATCATCGTTTCTGCTTTTGTT  Raphanus sativus cv Early Scarlet Globe
FD573357       <-- -ACtacccctttagtct.................................  Raphanus sativus cv Early Scarlet Globe
EX761217       <-- TAC---CCCTTTTGTTTACTCCAGTGAACATCATCGTTTTTGCTTT....  Raphanus raphanistrum subsp. raphanistrum (MS)
FD976773       <-- -AC---CCCTTTTGTTTACTCCAGTGAACATCATCGTTTCTGCTT.....  Raphanus raphanistrum subsp. raphanistrum (NY)
EX759806       <-- -AC---CCCTTTTGTTTACTCCAGTGAACATCATCGTTctgcc.......  Raphanus raphanistrum subsp. raphanistrum (MS)
FD537953       <-- TAC---CCCTTTTGTTTACTCCAGTGAACATCATCGTTTCTGCTTTTGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD960983       <-- -AC---CCCTTTTGTTTACTCCAGTGAACATCATCGTTTTTGCT......  Raphanus raphanistrum subsp. maritimus
EX774565       <-- -AC---CCCTTTTGTTTACTCCAGTGAACATCATCGTTTCTGCTTTTGTT  Raphanus raphanistrum subsp. landra
EY934043       <-- -ACTACCCCTTTTGTTTACTCCAGTGAACATCATCGTTTC..........  Raphanus sativus cv Early Scarlet Globe
EV528198       --> -AC---CCCTTTTGTTTACTCCAGTGAACATCATCGTTTCTGC.......  Raphanus raphanistrum subsp. maritimus
EV568984       --> -AC---CCCTTTTGTTTACTCCAGTGAACATCATCGTTTCTGCTTTTGTT  Raphanus raphanistrum subsp. landra
EX757696       --> TAC---CCCTTTTGTTTACTCCAGTGAACATCATCGTTTCTGCTTTaaaa  Raphanus raphanistrum subsp. raphanistrum (MS)
EX770359       --> -AC---CCCTTTTGTTTACTCCAGTGAACATCATCGTTTCTGCTTT-GTT  Raphanus raphanistrum subsp. landra
EY937793       --> -ACTACCCCTTTTGTTTACTCCAGTGAACATCATCGTTTCTGCcg.....  Raphanus sativus cv Early Scarlet Globe
FD965163       --> -AC---CCCTTTTGTTTACTCCAGTGAACATCATCGTTTCTGCTaaaa..  Raphanus raphanistrum subsp. maritimus
EV568887       --> -AC---CCCTTTTGTTTACTCCAGTGAACATCATCGTTTCTGCTTTTGTT  Raphanus raphanistrum subsp. landra
EV536319       --> TAC---CCCTTTTGTTTACTCCAGTGAACATCATCGTTTCTGCTTTTGT.  Raphanus raphanistrum subsp. raphanistrum (MS)
EY905413       --> TAC---CCCTTTTGTTTACTCCAGTGAACATCATCGTTTCTGCTTTTGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD563000       --> -AC---CCCTTTTGTTTACTCCAGTGAACATCATCGTTTCTGCTTTTGTT  Raphanus sativus var. oleiformis
FD569093       --> -ACtacccctttagtcta................................  Raphanus sativus cv Early Scarlet Globe
EX755877       --> TAC---CCCTTTTGTTTACTCCAGTGAACATCATCGTTTCTGCT......  Raphanus raphanistrum subsp. raphanistrum (MS)
FD541732       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD980971       --> -AC---CCCTTTTGTTTACTCCAGTGAACATCATCGTTTCTGCTTTa...  Raphanus raphanistrum subsp. raphanistrum (NY)
EX755825       --> -AC---CCCTTTTGTTTACTCCAGTGAACATCATCGTTctgccgaaaa..  Raphanus raphanistrum subsp. raphanistrum (MS)
EW723067       --> -ACTACCCCTTTTGTTTACTCCAGTGAACATCATCGTTTCTGCTTTTGTT  Raphanus sativus cv Early Scarlet Globe
EX896257       --> -ACta.............................................  Raphanus sativus cv Early Scarlet Globe

               751    -    801
UN13134        --> TTATATCCAACATCTAAATCTATTTGCGGTAACAGAGTACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532254       <-- .........................................  Raphanus raphanistrum subsp. maritimus
EX900202       <-- .........................................  Raphanus sativus cv Early Scarlet Globe
EV573593       <-- TTATATCCAACATCTAAATCTATTTGCGGT...........  Raphanus raphanistrum subsp. landra
EV540795       <-- .........................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY901856       <-- TAATATCCAACATCTAAATCTATTTGCGG............  Raphanus raphanistrum subsp. raphanistrum (MS)
EW727942       <-- Tat......................................  Raphanus sativus cv Early Scarlet Globe
FD573357       <-- .........................................  Raphanus sativus cv Early Scarlet Globe
EX761217       <-- .........................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD976773       <-- .........................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX759806       <-- .........................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD537953       <-- TAATATCCAACATCTAAATCTATTTGCGG............  Raphanus raphanistrum subsp. raphanistrum (MS)
FD960983       <-- .........................................  Raphanus raphanistrum subsp. maritimus
EX774565       <-- TTATATCCAACATCTAAATCTATTTGCGGTAACAGAGTACC  Raphanus raphanistrum subsp. landra
EY934043       <-- .........................................  Raphanus sativus cv Early Scarlet Globe
EV528198       --> .........................................  Raphanus raphanistrum subsp. maritimus
EV568984       --> TTATATCCAACATCTAAATCTATTTGCGGT...........  Raphanus raphanistrum subsp. landra
EX757696       --> aaaa.....................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX770359       --> TTATATCCAACATCTAAATCTATTTGCGGTAACAGAGTACC  Raphanus raphanistrum subsp. landra
EY937793       --> .........................................  Raphanus sativus cv Early Scarlet Globe
FD965163       --> .........................................  Raphanus raphanistrum subsp. maritimus
EV568887       --> TT.......................................  Raphanus raphanistrum subsp. landra
EV536319       --> .........................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY905413       --> TAATATCCAACATCTAAATCTATTTGCGGaaaaaaa.....  Raphanus raphanistrum subsp. raphanistrum (MS)
FD563000       --> .........................................  Raphanus sativus var. oleiformis
FD569093       --> .........................................  Raphanus sativus cv Early Scarlet Globe
EX755877       --> .........................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD541732       --> .........................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD980971       --> .........................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX755825       --> .........................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW723067       --> Tat......................................  Raphanus sativus cv Early Scarlet Globe
EX896257       --> .........................................  Raphanus sativus cv Early Scarlet Globe