0      -     50
UN13163        --> .GGATTCTCACAACTCTTCACCATCTCTCTCTGTAAAAATCTAAACAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX900290       <-- .GGATTCTCACAACTCTTCACCATCTCTCTCTGTAAAAATCTAAACAAAA  Raphanus sativus cv Early Scarlet Globe
EY944683       <-- .GGATTCTCACAACTCTTCACCATCTCTCTCTGTAAAAATCTAAACAAAA  Raphanus sativus cv Rat-Tail Radish #3870
FD553538       <-- .GGATTCTCACAACTCTTCACCATCTCTCTCTGTAAAAATCTAAACAAAA  Raphanus raphanistrum subsp. landra
EV539767       <-- ggatTTCTCACAACTCTTCACCATCTCTCTCTCTAAAAATCTTAACAAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY895683       <-- .......ggACAACTCTTCACCATCTCTCTCTGTAAAAATCTAAACAAAA  Raphanus raphanistrum subsp. maritimus
EV572827       <-- ...............CTTCACCATCTCTCTCTGTAAAAATCTAAACAAAA  Raphanus raphanistrum subsp. landra
FD976949       <-- ....................CCATCTCTCTCTCTAAAAATCTTAACAAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
AB447919       <-- ..................................................  Raphanus sativus cv Sakurajima Daikon var. niger
EY903727       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD552812       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY945608       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY936994       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD934759       <-- ..................................................  Raphanus sativus var. oleiformis
EX753543       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV571985       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD968258       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV525633       --> .GGATTCTCACAACTCTTCACCATCTCTCTCTGTAAAAATCTAAACAAAA  Raphanus raphanistrum subsp. maritimus
EV537679       --> .GGATTCTCACAACTCTTCACCATCTCTCTCTCTAAAAATCTTAACAAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV568011       --> .GGATTCTCACAACTCTTCACCATCTCTCTCTGTAAAAATCTAAACAAAA  Raphanus raphanistrum subsp. landra
EX888780       --> .GGATTCTCACAACTCTTCACCATCTCTCTCTGTAAAAATCTAAACAAAA  Raphanus sativus var. oleiformis
EY907904       --> .GGATTCTCACAACTCTTCACCATCTCTCTCTCTAAAAATCTTAACAAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY941403       --> .GGATTCTCACAACTCTTCACCATCTCTCTCTGTAAAAATCTAAACAAAA  Raphanus sativus cv Early Scarlet Globe
EY949105       --> .GGATTCTCACAACTCTTCACCATCTCTCTCTGTAAAAATCTAAACAAAA  Raphanus sativus cv Rat-Tail Radish #3870
FD557439       --> .GGATTCTCACAACTCTTCACCATCTCTCTCTGTAAAAATCTAAACAAAA  Raphanus raphanistrum subsp. landra
FD981171       --> .GGATTCTCACAACTCTTCACCATCTCTCTCTCTAAAAATCTTAACAAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD556522       --> ..GATTCTCACAACTCTTCACCATCTCTCTCTGTAAAAATCTAAACAAAA  Raphanus raphanistrum subsp. landra
EV534990       --> ggatTTCTCACAACTCTTCACCATCTCTCTCTCTAAAAATCTTAACAAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW717572       --> .....gCTCACAACTCTTCACCATCTCTCTCTGTAAAAATCTAAACAAAA  Raphanus sativus var. oleiformis
EY900036       --> .......ggACAACTCTTCACCATCTCTCTCTGTAAAAATCTAAACAAAA  Raphanus raphanistrum subsp. maritimus
EV566969       --> ....................ggATCTCTCTCTGTAAAAATCTAAACAAGA  Raphanus raphanistrum subsp. landra
EX902454       --> .........................................ggAACAAAA  Raphanus sativus cv Rat-Tail Radish #3870
EX749973       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX888030       --> ..................................................  Raphanus sativus var. oleiformis

               50     -    100
UN13163        --> CTCATTTCAAGTTCGATCAAGAAAACCAAGAACGATGCCTAAAGACAGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX900290       <-- CTCATTTCAAGTTCGATCAAGAAAACCAAGAACGATGCCTAAAGACAGGA
EY944683       <-- CTCATTTCAAGTTCGATCAAGAAAACCAAGAACGATGCCTAAAGACAGGA
FD553538       <-- CTCATTTCAAGTTCGATCAAGAAAACTAAGAACGATGC-TAAAGACAGGA
EV539767       <-- CTCATTTCAAGTTCGATCAAGAAAACCAAGAACGATGCCTAAAGACAGGA
EY895683       <-- CTCATTTCAAGTTCGATCAAGAAAACCAAGAACGATGCCTAAAGACAGGA
EV572827       <-- CTCATTTCAAGTTCGATCAAGAAAACCAAGAACGATGCCTAAAGACAGGA
FD976949       <-- CTCATTTCAAGTTCGATCAAGAAAACCAAGAACGATGCCTAAAGACAGGA
AB447919       <-- ......................aacCCAAGAACGATGCCTAAAGACAGGA
EY903727       <-- ..................................................
FD552812       <-- ..................................................
EY945608       <-- ..................................................
EY936994       <-- ..................................................
FD934759       <-- ..................................................
EX753543       <-- ..................................................
EV571985       <-- ..................................................
FD968258       <-- ..................................................
EV525633       --> CTCATTTCAAGTTCGATCAAGAAAACCAAGAACGATGCCTAAAGACAGGA
EV537679       --> CTCATTTCAAGTTCGATCAAGAAAACCAAGAACGATGCCTAAAGACAGGA
EV568011       --> CTCATTTCAAGTTCGATCAAGAAAACCAAGAACGATGCCTAAAGACAGGA
EX888780       --> CTCATTTCAAGTTCGATCAAGAAAACCAAGAACGATGCCTAAAGACAGGA
EY907904       --> CTCATTTCAAGTTCGATCAAGAAAACCAAGAACGATGCCTAAAGACCGGA
EY941403       --> CTCATTTCAAGTTCGATCAAGAAAACCAAGAACGATGCCTAAAGACAGGA
EY949105       --> CTCATTTCAAGTTCGATCAAGAAAACCAAGAACGATGCCTAAAGACAGGA
FD557439       --> CTCATTTCAAGTTCGATCAAGAAAACTAAGAACGATGC-TAAAGACAGGA
FD981171       --> CTCATTTCAAGTTCGATCAAGAAAACCAAGAACGATGCCTAAAGACAGGA
FD556522       --> CTCATTTCAAGTTCGATCAAGAAAACCAAGAACGATGCCTAAAGACAGGA
EV534990       --> CTCATTTCAAGTTCGATCAAGAAAACCAAGAACGATGCCTAAAGACAGGA
EW717572       --> CTCATTTCAAGTTCGATCAAGAAAACCAAGAACGATGCCTAAAGACAGGA
EY900036       --> CTCATTTCAAGTTCGATCAAGAAAACCAAGAACGATGCCTAAAGACAGGA
EV566969       --> CTCATTTCAAGTTCGATCAAGAAAACCAAGAACGATGCCTAAAGACAGGA
EX902454       --> CTCATTTCAAGTTCGATCAAGAAAACCAAGAACGATGCCTAAAGACAGGA
EX749973       --> ..........................gAAGAACGATGCCTAAAGACAGGA
EX888030       --> ..................................................

               100    -    150
UN13163        --> AGATCGGAATCGCCATGGATTTCTCGGAGAGCAGCAAGAACGCACTCAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX900290       <-- AGATCGGAATCGCCATGGATTTCTCGGAGAGCAGCAAGAACGCACTCAAA
EY944683       <-- AGATCGGAATCGCCATGGATTTCTCGGAGAGCAGCAAGAACGCACTCAAA
FD553538       <-- AGATCGGAATCGCCATGGATTTCTCGGAGAGCAGCAAGAACGCACTCAAA
EV539767       <-- AGATCGGAATCGCCATGGATTTCTCGGAGAGCAGCAAGAACGCACTCAAA
EY895683       <-- AGATCGGAATCGCCATGGATTTCTCGGAGAGCAGCAAGAACGCACTCAAA
EV572827       <-- AGATCGGAATCGCCATGGATTTCTCGGAGAGCATCAAGAACGCACTCAAA
FD976949       <-- AGATCGGAATCGCCATGGATTTCTCGGAGAGCAGCAAGAACGCACTCAAA
AB447919       <-- AGATCGGAATCGCCATGGATTTCTCGGAGAGCAGCAAGAACGCACTCAAA
EY903727       <-- ..ATCGGAATCGCCATGGATTTCTCGGAGAGCAGCAAGAACGCACTCAAA
FD552812       <-- ...............................caaCAAGAACGCACTCAAA
EY945608       <-- ..................................................
EY936994       <-- ..................................................
FD934759       <-- ..................................................
EX753543       <-- ..................................................
EV571985       <-- ..................................................
FD968258       <-- ..................................................
EV525633       --> AGATCGGAATCGCCATGGATTTCTCGGAGAGCAGCAAGAACGCACTCAAA
EV537679       --> AGATCGGAATCGCCATGGATTTCTCGGAGAGCAGCAAGAACGCACTCAAA
EV568011       --> AGATCGGAATCGCCATGGATTTCTCGGAGAGCATCAAGAACGCACTCAAA
EX888780       --> AGATCGGAATCGCCATGGATTTCTCGGAGAGCAGCAAGAACGCACTCAAA
EY907904       --> AGATCGGAATCGCCATGGATTTCTCGGAGAGCAGCAAGAACGCACTCAAA
EY941403       --> AGATCGGAATCGCCATGGATTTCTCGGAGAGCAGCAAGAACGCACTCAAA
EY949105       --> AGATCGGAATCGCCATGGATTTCTCGGAGAGCAGCAAGAACGCACTCAAA
FD557439       --> AGATCGGAATCGCCATGGATTTCTCGGAGAGCAGCAAGAACGCACTCAAA
FD981171       --> AGATCGGAATCGCCATGGATTTCTCGGAGAGCAGCAAGAACGCACTCAAA
FD556522       --> AGATCGGAATCGCCATGGATTTCTCGGAGAGCAACAAGAACGCACTCAAA
EV534990       --> AGATCGGAATCGCCATGGATTTCTCGGAGAGCAGCAAGAACGCACTCAAA
EW717572       --> AGATCGGAATCGCCATGGATTTCTCGGAGAGCAGCAAGAACGCACTCAAA
EY900036       --> AGATCGGAATCGCCATGGATTTCTCGGAGAGCAGCAAGAACGCACTCAAA
EV566969       --> AGATCGGAATCGCCATGGATTTCTCGGAGAGCAGCAAGAACGCACTCAAA
EX902454       --> AGATCGGAATCGCCATGGATTTCTCGGAGAGCAGCAAGAACGCACTCAAA
EX749973       --> AGATCGGAATCGCCATGGATTTCTCGGAGAGCAGCAAGAACGCACTCAAA
EX888030       --> ..................................................

               150    -    200
UN13163        --> TGGGCCATCGAGAACTTAGCTGACAAAGGAGACACACTTTACATCATCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX900290       <-- TGGGCTATCGAGAACTTAGCTGACAAAGGAGACACACTTTACATCATCCA
EY944683       <-- TGGGCCATCGAGAACTTAGCTGACAAAGGAGACACACTTTACATCATCCA
FD553538       <-- TGGGCCATCGAGAACTTAGCTGACAAAGGAGACACACTTTACATCATCCA
EV539767       <-- TGGGCCATCGAGAACTTAGCTGACAAAGGAGACACACTTTACATCATCCA
EY895683       <-- TGGGCCATCGAGAACTTAGCTGACAAAGGAGACACACTTTACATCATCCA
EV572827       <-- TGGGCCATCGAGAACTTAGCTGACAAAGGAGACACACTTTACATCATCCA
FD976949       <-- TGGGCCATCGAGAACTTAGCTGACAAAGGAGACACACTTTACATCATCCA
AB447919       <-- TGGGCCATCGAGAACTTAGCTGACAAAGGAGACACACTTTACATCATCCA
EY903727       <-- TGGGCCATCGAGAACTTAGCTGACAAAGGAGACACACTTTACATCATCCA
FD552812       <-- TGGGCCATCGAGAACTTAGCTGACAAAGGAGACACACTTTACATCATCCA
EY945608       <-- ..................................................
EY936994       <-- ..................................................
FD934759       <-- ..................................................
EX753543       <-- ..................................................
EV571985       <-- ..................................................
FD968258       <-- ..................................................
EV525633       --> TGGGCCATCGAGAACTTAGCTGACAAAGGAGACACACTTTACATCATCCA
EV537679       --> TGGGCCACCGAGAACTTAGCTGACAAAGGAGACACACTTTACATCATCCA
EV568011       --> TGGGCCATCGAGAACTTAGCTGACAAAGGAGACACACTTTACATCATCCA
EX888780       --> TGGGCCATCGAGAACTTAGCTGACAAAGGAGACACACTTTACATCATCCA
EY907904       --> TGGGCCATCGAGAACTTAGCTGACAAAGGAGACACACTTTACATCATCCA
EY941403       --> TGGGCCATCGAGAACTTAGCTGACAAAGGAGACACACTTTACATCATCCA
EY949105       --> TGGGCCATCGAGAACTTAGCTGACAAAGGAGACACACTTTACATCATCCA
FD557439       --> TGGGCCATCGAGAACTTAGCTGACAAAGGAGACACACTTTACATCATCCA
FD981171       --> TGGGCCATCGAGAACTTAGCTGACAAAGGAGACACACTTTACATCATCCA
FD556522       --> TGGGCCATCGAGAACTTAGCTGACAAAGGAGACACACTTTACATCATCCA
EV534990       --> TGGGCCATCGAGAACTTAGCTGACAAAGGAGACACACTTTACATCATCCA
EW717572       --> TGGGCCATCGAGAACTTAGCTGACAAAGGAGACACACTTTACATCATCCA
EY900036       --> TGGGCCATCGAGAACTTAGCTGACAAAGGAGACACACTTTACATCATCCA
EV566969       --> TGGGCCATCGAGGACTTAGCTGACAAAGGAGACACACTTTACATCATCCA
EX902454       --> TGGGCCATCGAGAACTTAGCTGACAAAGGAGACACACTTTACATCATCCA
EX749973       --> TGGGCCATCGAGAACTTAGCTGACAAAGGAGACACACTTTACATCATCCA
EX888030       --> ..................................................

               200    -    250
UN13163        --> CACGTTACCTACCTCTGATGCTGAATCTCGCAACGCCCTCTGGCTCGAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX900290       <-- CACGTTACCTACCTCTGATGCTGAATCTCGCAACGCCCTCTGGCTCGAAT  Raphanus sativus cv Early Scarlet Globe
EY944683       <-- CACGTTACCTACCTCTGATGCTGAATCTCGCACCGCCCTCTGGCTCGAAT  Raphanus sativus cv Rat-Tail Radish #3870
FD553538       <-- CACGTTACCTACCTCTGATGCTGAATCTCGCAACGCCCTCTGGCTCGAAT  Raphanus raphanistrum subsp. landra
EV539767       <-- CACGTTACCTACCTCTGAAGCTGAATCTCGCAACGCCCTCTGGCTCGAAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY895683       <-- CACGTTACCTACCTCTGATGCTGAATCTCGCAACGCCCTCTGGCTCGAAT  Raphanus raphanistrum subsp. maritimus
EV572827       <-- CACGTTACCTACCTCTGATGCTGAATCTCGCAACGCCCTCTGGCTCGAAT  Raphanus raphanistrum subsp. landra
FD976949       <-- CACGTTACCTACCTCTGACGCTGAATCTCGCAACGCCCTCTGGCTCGAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
AB447919       <-- CACGTTACCTACCTCTGATGCTGAATCTCGCAACGCCCTCTGGCTCGAAT  Raphanus sativus cv Sakurajima Daikon var. niger
EY903727       <-- CACGTTACCTACCTCTGAAGCTGAATCTCGCAACGCCCTCTGGCTCGAAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD552812       <-- CACGTTACCTACCTCTGATGCTGAATCTCGCAACGCCCTCTGGCTCGAAT  Raphanus raphanistrum subsp. landra
EY945608       <-- ........................ATCTCGCAACGCCCTCTGGCTCGAAT  Raphanus sativus cv Rat-Tail Radish #3870
EY936994       <-- .................................................T  Raphanus sativus cv Early Scarlet Globe
FD934759       <-- ..................................................  Raphanus sativus var. oleiformis
EX753543       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV571985       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD968258       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV525633       --> CACGTTACCTACCTCTGATGCTGAATCTCGCAACGCCCTCTGGCTCGAAT  Raphanus raphanistrum subsp. maritimus
EV537679       --> CACGTTACCTACCTCTGAAGCTGAATCTCGCAACGCCCTCTGGCTCGAAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV568011       --> CACGTTACCTACCTCTGATGCTGAATCTCGCAACGCCCTCTGGCTCGAAT  Raphanus raphanistrum subsp. landra
EX888780       --> CACGTTACCTACCTCTGATGCTGAATCTCGCAACGCCCTCTGGCTCGAAT  Raphanus sativus var. oleiformis
EY907904       --> CACGTTACCTACCTCTGAAGCTGAATCTCGCAACGCCCTCTGGCTCGAAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY941403       --> CACGTTACCTACCTCTGATGCTGAATCTCGCAACGCCCTCTGGCTCGAAT  Raphanus sativus cv Early Scarlet Globe
EY949105       --> CACGTTACCTACCTCTGATGCTGAATCTCGCACCGCCCTCTGGCTCGAAT  Raphanus sativus cv Rat-Tail Radish #3870
FD557439       --> CACGTTACCTACCTCTGATGCTGAATCTCGCAACGCCCTCTGGCTCGAAT  Raphanus raphanistrum subsp. landra
FD981171       --> CACGTTACCTACCTCTGACGCTGAATCTCGCAACGCCCTCTGGCTCGAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD556522       --> CACGTTACCTACCTCTGATGCTGAATCTCGCAACGCCCTCTGGCTCGAAT  Raphanus raphanistrum subsp. landra
EV534990       --> CACGTTACCTACCTCTGAAGCTGAATCTCGCAACGCCCTCTGGCTCGAAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW717572       --> CACGTTACCTACCCCTGATGCTGAATCTCGCAACGCCCTCTGGCTCGAAT  Raphanus sativus var. oleiformis
EY900036       --> CACGTTACCTACCTCTGATGCTGAATCTCGCAACGCCCTCTGGCTCGAAT  Raphanus raphanistrum subsp. maritimus
EV566969       --> CACGTTACCTACCTCTGATGCTGAATCTCGCAACGCCCTCTGGCTCGAAT  Raphanus raphanistrum subsp. landra
EX902454       --> CACGTTACCTACCTCTGATGCTGAATCTCGCAACGCCCTCTGGCTCGAAT  Raphanus sativus cv Rat-Tail Radish #3870
EX749973       --> CACGTTACCTACCTCTGATGCTGAATCTCGCAACGCCCTCTGGCTCGAAT  Raphanus raphanistrum subsp. maritimus
EX888030       --> ..................................................  Raphanus sativus var. oleiformis

               250    -    300
UN13163        --> CCGGTTCTCCTCTTATACCGTTGGCTGAATTTAGGGAACCGAAGATCATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX900290       <-- CCGGTTCTCCTCTTATACCGTTGGCTGAATTTAGGGAACCGAAGATCATG  Raphanus sativus cv Early Scarlet Globe
EY944683       <-- CCGGTTCTCCTCTTATACCGTTGGCTGAATTTAGGGAACCGAAGATCATG  Raphanus sativus cv Rat-Tail Radish #3870
FD553538       <-- CCGGTTCTCCTCTTATACCGTTGGCTGAATTTAGGGAACCGAAGATCATG  Raphanus raphanistrum subsp. landra
EV539767       <-- CCGGTTCTCCTCTCATACCGTTGGCTGAATTTAGGGAACCGAAGATCATG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY895683       <-- CCGGTTCTCCTCTTATACCGTTGGCTGAATTTAGGGAACCGAAGATCATG  Raphanus raphanistrum subsp. maritimus
EV572827       <-- CCGGTTCTCCTCTTATACCGTTGGCTGAATTTAGGGAACCGAAGATCATG  Raphanus raphanistrum subsp. landra
FD976949       <-- CCGGTTCTCCTCTTATACCGTTGGCTGAGTTTAGGGAACCGAAGATCATG  Raphanus raphanistrum subsp. raphanistrum (NY)
AB447919       <-- CCGGTTCTCCTCTTATACCGTTGGCTGAATTTAGGGAACCGAAGATCATG  Raphanus sativus cv Sakurajima Daikon var. niger
EY903727       <-- CCGGTTCTCCTCTCATACCGTTGGCTGAATTTAGGGAACCGAAGATCATG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD552812       <-- CCGGTTCTCCTCTTATACAGTTGGCTGAATTTAGGGAACCGAAGATCATG  Raphanus raphanistrum subsp. landra
EY945608       <-- CCGGTTCTCCTCTTATACCGTTGGCTGAATTTAGGGAACCGAAGATCATG  Raphanus sativus cv Rat-Tail Radish #3870
EY936994       <-- CCGGTTCTCCTCTTATACCGTTGGCTGAATTTAGGGAACCGAAGATCATG  Raphanus sativus cv Early Scarlet Globe
FD934759       <-- ............................ATTTAGGGAACCGAAGATCATG  Raphanus sativus var. oleiformis
EX753543       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV571985       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD968258       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV525633       --> CCGGTTCTCCTCTTATACCGTTGGCTGAATTTAGGGAATCGAAGATCATG  Raphanus raphanistrum subsp. maritimus
EV537679       --> CCGGTTCTCCTCTCATACCGTTGGCTGAATTTAGGGAACCGAAGATCATG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV568011       --> CCGGTTCTCCTCTTATACCGTTGGCTGAATTTAGGGAACCGAAGATCATG  Raphanus raphanistrum subsp. landra
EX888780       --> CCGGTTCTCCTCTCATACCGTTGGATGAGTTTAGGGAACCGAAGACCATG  Raphanus sativus var. oleiformis
EY907904       --> CCGGTTCTCCTCTCATACCGTTGGCTGAATTTAGGGAACCGAAGATCATG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY941403       --> CCGGTTCTCCTCTTATACCGTTGGCTGAATTTAGGGAACCGAAGATCATG  Raphanus sativus cv Early Scarlet Globe
EY949105       --> CCGGTTCTCCTCTTATACCGTTGGCTGAATTTAGGGAACCGAAGATCATG  Raphanus sativus cv Rat-Tail Radish #3870
FD557439       --> CCGGTTCTCCTCTTATACCGTTGGCTGAATTTAGGGAACCGAAGATCATG  Raphanus raphanistrum subsp. landra
FD981171       --> CCGGTTCTCCTCTTATACCGTTGGCTGAGTTTAGGGAACCGAAGATCATG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD556522       --> CCGGTTCTCCTCTTATACAGTTGGCTGAATTTAGGGAACCGAAGATCATG  Raphanus raphanistrum subsp. landra
EV534990       --> CCGGTTCTCCTCTCATACCGTTGGCTGAATTTAGGGAACCGAAGATCATG  Raphanus raphanistrum subsp. raphanistrum (MS)
EW717572       --> CCGGTTCTCCTCTCATACCGTTGGATGAGTTTAGGGAACCGAAGATCATG  Raphanus sativus var. oleiformis
EY900036       --> CCGGTTCTCCTCTTATACCGTTGGCTGAATTTAGGGAACCGAAGATCATG  Raphanus raphanistrum subsp. maritimus
EV566969       --> CCGGTTCTCCTCTTATACCGTTGGCTGAATTTAGGGAACCGAAGATCATG  Raphanus raphanistrum subsp. landra
EX902454       --> CCGGTTCTCCTCTTATACCGTTGGCTGAATTTAGGGAACCGAAGATCATG  Raphanus sativus cv Rat-Tail Radish #3870
EX749973       --> CCGGTTCTCCTCTTATACCGTTGGCTGAATTTAGGGAACCGAAGATCATG  Raphanus raphanistrum subsp. maritimus
EX888030       --> ..................................................  Raphanus sativus var. oleiformis

               300    -    350
UN13163        --> GAGAACTACGGTGTCAAGATCGACATCGCATGTCTTGACATGCTCGACAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX900290       <-- GAGAACTACGGTGTCAAGATCGACATCGCATGTCTTGACATGCTCGACAC  Raphanus sativus cv Early Scarlet Globe
EY944683       <-- GAGAACTACGGTGTCAAGATCGACATCGCATGTCTTGACATGCTCGACAC  Raphanus sativus cv Rat-Tail Radish #3870
FD553538       <-- GAGAACTACGGTGTCAAGATCGACATCGCGTGTCTTGACATGCTCGACAC  Raphanus raphanistrum subsp. landra
EV539767       <-- GAGAACTACGGTGTCAAGATCGACATAGCATGTCTTGACATGCTCGACAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY895683       <-- GAGAACTACGGTGTCAAGATCGACATCGCATGTCTTGACATGCTCGACAC  Raphanus raphanistrum subsp. maritimus
EV572827       <-- GAGAACTACGGTGTCAAGATCGACATCGCATGTCTTGACATGCTCGACAC  Raphanus raphanistrum subsp. landra
FD976949       <-- GAGAACTACGGTGTCAAGATCAGCATAGCATGTCTTGACATGCTCGACAC  Raphanus raphanistrum subsp. raphanistrum (NY)
AB447919       <-- GAGAACTACGGTGTCAAGATCGACATCGCATGTCTTGACATGCTCGACAC  Raphanus sativus cv Sakurajima Daikon var. niger
EY903727       <-- GAGAACTACGGTGTCAAGATCGACATAGCATGTCTTGACATGCTCGACAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD552812       <-- GAGAACTACGGTGTCAAGATCGACATCGCATGTCTTGACATGCTCGACAC  Raphanus raphanistrum subsp. landra
EY945608       <-- GAGAACTACGGTGTCAAGATCGACATCGCATGTCTTGACATGCTCGACAC  Raphanus sativus cv Rat-Tail Radish #3870
EY936994       <-- GAGAACTACGGTGTCAAGATCGACATCGCATGTCTTGACATGCTCGACAT  Raphanus sativus cv Early Scarlet Globe
FD934759       <-- GAGAACTACGGTGTCAAGATCGACATCGCATGTCTTGACATGCTCGACAC  Raphanus sativus var. oleiformis
EX753543       <-- ......................ACATCGCATGTCTTGACATGCTCGACAC  Raphanus raphanistrum subsp. maritimus
EV571985       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD968258       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV525633       --> GAGAACTACGGTGTCAAGATCGACATCGCATGTCTTGACATGCTCGACAC  Raphanus raphanistrum subsp. maritimus
EV537679       --> GAGAACTACGGTGTCAAGATCGACATAGCATGTCTTGACATGCTCGACAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV568011       --> GAGAACTACGGTGTCAAGATCGACATCGCATGTCTTGACATGCTCGACAC  Raphanus raphanistrum subsp. landra
EX888780       --> GAGAACTACGGTGTCAAGATCGACATCGCATGTCTTGACATGCTCGACAC  Raphanus sativus var. oleiformis
EY907904       --> GAGAACTACGGTGTCAAGATCGACATAGCATGTCTTGACATGCTCGACAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY941403       --> GAGAACTACGGTGTCAAGATCGACATCGCATGTCTTGACATGCTCGACAT  Raphanus sativus cv Early Scarlet Globe
EY949105       --> GAGAACTACGGTGTCAAGATCGACATCGCATGTCTTGACATGCTCGACAC  Raphanus sativus cv Rat-Tail Radish #3870
FD557439       --> GAGAACTACGGTGTCAAGATCGACATCGCGTGTCTTGACATGCTCGACAC  Raphanus raphanistrum subsp. landra
FD981171       --> GAGAACTACGGTGTCAAGATCAGCATAGCATGTCTTGACATGCTCGACAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD556522       --> GAGAACTACGGTGTCAAGATCGACATCGCATGTCTTGACATGCTCGACAC  Raphanus raphanistrum subsp. landra
EV534990       --> GAGAACTACGGTGTCAAGATCGACATAGCATGTCTTGACATGCTCGACAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EW717572       --> GAGAACTACGGTGTCAAGATCGACATCGCATGTCTTGACATGCTCGACAC  Raphanus sativus var. oleiformis
EY900036       --> GAGAACTACGGTGTCAAGATCGACATCGCATGTCTTGACATGCTCGACAC  Raphanus raphanistrum subsp. maritimus
EV566969       --> GAGAACTACGGTGTCAAGATCGACATCGCATGTCTTGACATGCTCGACAC  Raphanus raphanistrum subsp. landra
EX902454       --> GAGAACTACGGTGTCAAGATCGACATCGCATGTCTTGACATGCTCGACAC  Raphanus sativus cv Rat-Tail Radish #3870
EX749973       --> GAGAACTACGGTGTCAAGATCGACATCGCATGTCTTGACATGCTCGACAC  Raphanus raphanistrum subsp. maritimus
EX888030       --> ..................................................  Raphanus sativus var. oleiformis

               350    -    400
UN13163        --> TGGTTCAAGGAAGAAAGAGGTGCATGTAGTGACAAAACTATACTGGGGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX900290       <-- TGGTTCAAGGAAGAAAGAGGTTCATGTCGTGACAAAACTATACTGGGGTG  Raphanus sativus cv Early Scarlet Globe
EY944683       <-- TGGTTCAAGGAAGAAAGAGGTGCATGTAGTGACAAAACTATACTGGGGTG  Raphanus sativus cv Rat-Tail Radish #3870
FD553538       <-- TGGTTCAAGGAAGAAAGAGGTGCATGTAGTGACAAAACTATACTGGGGTG  Raphanus raphanistrum subsp. landra
EV539767       <-- TGGTTCAAGGAAGAAAGAGGTTCATGTAGTGACAAAACTATACTGGGGTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY895683       <-- TGGTTCAAGGAAGAAAGAGGTGCATGTAGTGACAAAACTATACTGGGGTG  Raphanus raphanistrum subsp. maritimus
EV572827       <-- TGGTTCAAGGAAGAAAGAGGTGCATGTAGTGACAAAACTATACTGGGGTG  Raphanus raphanistrum subsp. landra
FD976949       <-- TGGTTCAAGGAAGAAAGAGGTTCATGTAGTGACAAAACTATACTGGGGTG  Raphanus raphanistrum subsp. raphanistrum (NY)
AB447919       <-- TGGTTCAAGGAAGAAAGAGGTGCATGTAGTGACAAAACTATACTGGGGTG  Raphanus sativus cv Sakurajima Daikon var. niger
EY903727       <-- TGGTTCAAGGAAGAAAGAGGTTCATGTAGTGACAAAACTATACTGGGGTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD552812       <-- TGGTTCAAGGAAGAAAGAGGTGCATGTAGTGACAAAACTATACTGGGGTG  Raphanus raphanistrum subsp. landra
EY945608       <-- TGGTTCAAGGAAGAAAGAGGTGCATGTAGTGACAAAACTATACTGGGGTG  Raphanus sativus cv Rat-Tail Radish #3870
EY936994       <-- TGGTTCAAGGAAGAAAGAGGTTCATGTCGTGACAAAACTATACTGGGGTG  Raphanus sativus cv Early Scarlet Globe
FD934759       <-- TGGTTCAAGGAAGAAAGAGGTGCATGTAGTGACAAAACTATACTGGGGTG  Raphanus sativus var. oleiformis
EX753543       <-- TGGTTCAAGGAAGAAAGAGGTGCATGTAGTGACAAAACTATACTGGGGTG  Raphanus raphanistrum subsp. maritimus
EV571985       <-- ..................gggGCATGTAGTGACAAAACTATACTGGGGTG  Raphanus raphanistrum subsp. landra
FD968258       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV525633       --> TGGTTCAAGGAAGAAAGAGGTGCATGTAGTGACAAAACTATACTGGGGTG  Raphanus raphanistrum subsp. maritimus
EV537679       --> TGGTTCAAGGAAGAAAGAGGTTCATGTAGTGACAAAACTATACTGGGGTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV568011       --> TGGTTCAAGGAAGAAAGAGGTGCATGTAGTGACAAAACTATACTGGGGTG  Raphanus raphanistrum subsp. landra
EX888780       --> TGGTTCAAGGAAGAAAGAGGTTCATGTCGTGACAAAACTATACTGGGGTG  Raphanus sativus var. oleiformis
EY907904       --> TGGTTCAAGGAAGAAAGAGGTTCATGTAGTGACAAAACTATACTGGGGTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY941403       --> TGGTTCAAGGAAGAAAGAGGTTCATGTCGTGACAAAACTATACTGGGGTG  Raphanus sativus cv Early Scarlet Globe
EY949105       --> TGGTTCAAGGAAGAAAGAGGTGCATGTAGTGACAAAACTATACTGGGGTG  Raphanus sativus cv Rat-Tail Radish #3870
FD557439       --> TGGTTCAAGGAAGAAAGAGGTGCATGTAGTGACAAAACTATACTGGGGTG  Raphanus raphanistrum subsp. landra
FD981171       --> TGGTTCAAGGAAGAAAGAGGTTCATGTAGTGACAAAACTATACTGGGGTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD556522       --> TGGTTCAAGGAAGAAAGAGGTGCATGTAGTGACAAAACTATACTGGGGTG  Raphanus raphanistrum subsp. landra
EV534990       --> TGGTTCAAGGAAGAAAGAGGTTCATGTAGTGACAAAACTATACTGGGGTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EW717572       --> TGGTTCAAGGAAGAAAGAGGTTCATGTCGTGACAAAACTATACTGGGGTG  Raphanus sativus var. oleiformis
EY900036       --> TGGTTCAAGGAAGAAAGAGGTGCATGTAGTGACAAAACTATACTGGGGTG  Raphanus raphanistrum subsp. maritimus
EV566969       --> TGGTTCAAGGAAGAAAGAGGTGCATGTAGTGACAAAACTATACTGGGGTG  Raphanus raphanistrum subsp. landra
EX902454       --> TGGTTCAAGGAAGAAAGAGGTGCATGTAGTGACAAAACTATACTGGGGTG  Raphanus sativus cv Rat-Tail Radish #3870
EX749973       --> TGGTTCAAGGAAGAAAGAGGTGCATGTAGTGACAAAACTATACTGGGGTG  Raphanus raphanistrum subsp. maritimus
EX888030       --> ..................................................  Raphanus sativus var. oleiformis

               400    -    450
UN13163        --> ATGCAAGAGAGAAGCTGGTTGATGCTGTTAAAGAACTCAAACTGGATTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX900290       <-- ATGCAAGAGAGAAGCTGGTTGATGCTGTTAAAGAACTCAAACTGGATTCT
EY944683       <-- ATGCAAGAGAGAAGCTGGTTGATGCTGTTAAAGAACTCAAACTGGATTCT
FD553538       <-- ATGCAAGAGAGAAGCTGGTTGATGCTGTTAAAGAACTCAAACTGGATTCT
EV539767       <-- ATGCAAGAGAGAAGCTGGTTGATGCTGTTAAAGAACTCAAACTGGATTCT
EY895683       <-- ATGCAAGAGAGAAGCTGGTTGATGCTGTTAAAGAACTCAAACTGGATTCT
EV572827       <-- ATGCAAGAGAGAAGCTGGTTGATGCTGTTAAAGAACTCAAACTGGATTCT
FD976949       <-- ATGCAAGAGAGAAGCTGGTTGATGCTGTTAAAGAACTCAAACTGGATTCT
AB447919       <-- ATGCAAGAGAGAAGCTGGTTGATGCTGTTAAAGAACTCAAACTGGATTCT
EY903727       <-- ATGCAAGAGAGAAGCTGGTTGATGCTGTTAAAGAACTCAAACTGGATTCT
FD552812       <-- ATGCAAGAGAGAAGCTGGTTGATGCTGTTAAAGAACTCAAACTGGATTCC
EY945608       <-- ATGCAAGAGAGAAGCTGGTTGATGCTGTTAAAGAACTCAAACTGGATTCT
EY936994       <-- ATGCAAGAGAGAAGCTGGTTGATGCTGTTAAAGAACTCAAACTGGATTCT
FD934759       <-- ATGCAAGAGAGAAGCTGGTTGATGCTGTTAAAGAACTCAAACTGGATTCT
EX753543       <-- ATGCAAGAGAGAAGCTGGTTGATGCTGTTAAAGAACTCAAACTGGATTTT
EV571985       <-- ATGCAAGAGAGAAGCTGGTTGATGCTGTTAAAGAACTCAAACTGGATTTT
FD968258       <-- ................................................CT
EV525633       --> ATGCAAGAGAGAAGCTGGTTGATGCTGTTAAAGAACTCAAACTGGATTCT
EV537679       --> ATGCAAGAGAGAAGCTGGTTGATGCTGTTAAAGAACTCAAACTGGATTCT
EV568011       --> ATGCAAGAGAGAAGCTGGT...............................
EX888780       --> ATGCAAGAGAGAAGCTGGTTGATGCTGTTAAAGAACTCAAACTGGATTCT
EY907904       --> ATGCAAGAGAGAAGCTGGTTGATGCTGTTAAAGAACTCAAACTGGATTCT
EY941403       --> ATGCAAGAGAGAAGCTGGTTGATGCTGTTAAAGAACTCAAACTGGATTCT
EY949105       --> ATGCAAGAGAGAAGCTGGTTGATGCTGTTAAAGAACTCAAACTGGATTCT
FD557439       --> ATGCAAGAGAGAAGCTGGTTGATGCTGTTAAAGAACTCAAACTGGATTCT
FD981171       --> ATGCAAGAGAGAAGCTGGTTGATGCTGTTAAAGAACTCAAACTGGATTCT
FD556522       --> ATGCAAGAGAGAAGCTGGTTGATGCTGTTAAAGAACTCAAACTGGATTCC
EV534990       --> ATGCAAGAGAGAAGCTGGTTGATGCTGTTAAAGAACTCAAACTGGATTCT
EW717572       --> ATGCAAGAGAGAAGCGGGTTGATGCTGTTAAAGAACTCAAACTGGATTCT
EY900036       --> ATGCAAGAGAGAAGCTGGTTGATGCTGTTAAAGAACTCAAACTGGATTCT
EV566969       --> ATGCAAGAGAGAAGCTGGTTGATGCTGTTAAAGAACTCAAACTGGATTCT
EX902454       --> ATGCAAGAGAGAAGCTGGTTGATGCTGTTAAAGAACTCAAACTGGATTCT
EX749973       --> ATGCAAGAGAGAAGCTGGTTGATGCTGTTAAAGAACTCAAACTGGATTCT
EX888030       --> ..................................................

               450    -    500
UN13163        --> ATTGTCATGGGAAGCAGAGGACTCAGTGCCCTTCAAAGAATAATAATGGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX900290       <-- ATTGTCATGGGAAGCAGAGGACTCAGTGCCCTTCAAAGAATAATAATGGG
EY944683       <-- ATTGTCATGGGAAGCAGAGGACTCAGTGCCCTTCAAAGAATAATAATGGG
FD553538       <-- ATTGTCATGGGAAGCAGAGGACTCAGTGCCCTTCAAAGAGTAATAATGGG
EV539767       <-- ATTGTCATGGGAAGCAGAGGACTCAGTGCCCTTCAAAGAATAATAATGGG
EY895683       <-- ATTGTCATGGGGAGCAGAGGACTCAGTGCCCTTCAAGGAATAATAATGGG
EV572827       <-- ATTGTCATGGGAAGCAGAGGACTCAGTGCCCTTCAAAGAATAATAATGGG
FD976949       <-- ATTGTCATGGGAAGCAGAGGACTCAGTGCCCTTCAAAGAATAATAATGGG
AB447919       <-- ATTGTCATGGGAAGCAGAGGACTCAGTGCCCTTCAAAGAATAATAATGGG
EY903727       <-- ATTGTCATGGGAAGCAGAGGACTCAGTGCCCTTCAAAGAATAATAATGGG
FD552812       <-- ATTGTCATGGGAAGCAGAGGACTCAGTGCCCTTCAAAGAATAATAATGGG
EY945608       <-- ATTGTCATGGGAAGCAGAGGACTCAGTGCCCTTCAAAGAATAATAATGGG
EY936994       <-- ATTGTCATGGGAAGCAGAGGACTCAGTGCCCTTCAAAGAATAATAATGGG
FD934759       <-- ATTGTCATGGGAAGCAGAGGACTCAGTGCCCTTCAAAGAATAATAATGGG
EX753543       <-- ATTGTCATGGGAAGCAGAGGACTCAGTGCCCTTCAAAGAATAATAATGGG
EV571985       <-- ATTGTCATGGGAAGCAGAGGACTCAGTGCCCTTCAAAGAATAATAATGGG
FD968258       <-- ATTGTCATGGGAAGCAGAGGACTCAGTGCCCTTCAAAGAATAATAATGGG
EV525633       --> ATTGTCATGGGAAACAGAGGACTCAGTGCCCTTCAAAGAATAATAATGGG
EV537679       --> ATTGTCATGGGAAGCAGAGGACTCAGTGCCCTTCAAAGAATAATAATGGG
EV568011       --> ..................................................
EX888780       --> ATTGTCATGGGAAGCAGAGGACTCAGTGCCCTTCAAAGAATAATAATGGG
EY907904       --> ATTGTCATGGGAAGCAGAGGACTCAGTGCCCTTCAAAGAATAATAATGGG
EY941403       --> ATTGTCATGGGAAGCAGAGGACTCAGTGCCCTTCAAAGAATAATAATGGG
EY949105       --> ATTGTCATGGGAAGCAGAGGACTCAGTGCCCTTCAAAGAATAATAATGGG
FD557439       --> ATTGTCATGGGAAGCAGAGGACTCAGTGCCCTTCAAAGAGTAATAATGGG
FD981171       --> ATTGTCATGGGAAGCAGAGGACTCAGTGCCCTTCAAAGAATAATAATGGG
FD556522       --> ATTGTCATGGGAAGCAGAGGACTCAGTGCCCTTCAAAGAATAATAATGGG
EV534990       --> ATTGTCATGGGAAGCAGAGGACTCAGTGCCCTTCAAAGAATAATAATGGG
EW717572       --> ATTGTCATGGGAAGCAGAGGACTCAGTGCCCTTCAAAGAATAATAATGGG
EY900036       --> ATTGTCATGGGGAGCAGAGGACTCAGTGCCCTTCAAGGAATAATAATGGG
EV566969       --> ATTGTCATGGGAAGCAGAGGACTCAGTGCCCTTCAAAGAATAATAATGGG
EX902454       --> ATTGTCATGGGAAGCAGAGGACTCAGTGCCCTTCAAAGAATAATAATGGG
EX749973       --> ATTGTCATGGGAAGCAGAGGACTCAGTGCCCTTCAAAGAATAATAATGGG
EX888030       --> .................gGGACTCAGTGCCCTTCAAAGAATAATAATGGG

               500    -    550
UN13163        --> AAGCGTGAGCAGCTTTGTGATCGACCACGCGCCTTGCCCTGTCAC--CAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX900290       <-- AAGCGTGAGCAGCTTTGTGATCGACCACGCGCCTTGCCCTGTCAC--CAT
EY944683       <-- AAGCGTGAGCAGCTTTGTGATCGACCACGCGCCTTGCCCTGTCAC--CAT
FD553538       <-- AAGCGTGAGCAGCTTTGTGATCGACCACGCGCCTTGCCCTGTCAC--CAT
EV539767       <-- AAGCGTGAGCAGCTTTGTGATCGACCACGCGCCTTGCCCTGTCAC--CAT
EY895683       <-- AAGCGTGAGCAGCTTTGTGATCGACCACGCGCCTTGCCCTGTCAC--CAT
EV572827       <-- AAGCGTGAGCAGCTTTGTGATCGACCACGCGCCTTGCCCTGTCAC--CAT
FD976949       <-- AAGCGTGAGCAGCTTTGTGATCGACCACGCGCCTTGCCCTGTCAC--CAT
AB447919       <-- AAGCGTGAGCAGCTTTGTGATCGACCACGCGCCTTGCCCTGTCACGATAT
EY903727       <-- AAGCGTGAGCAGCTTTGTGATCGACCACGCGCCTTGCCCTGTCAC--CAT
FD552812       <-- AAGCGTGAGCAGCTTTGTGATCGACCACGCGCCTTGCCCTGTCAC--CAT
EY945608       <-- AAGCGTGAGCAGCTTTGTGATCGACCACGCGCCTTGCCCTGTCAC--CAT
EY936994       <-- AAGCGTGAGCAGCTTTGTGATCGACCACGCGCCTTGCCCTGTCAC--CAT
FD934759       <-- AAGCGTGAGCAGCTTTGTGATCGACCACGCGCCTTGCCCTGTCAC--CAT
EX753543       <-- AAGCGTGAGCAGCTTTGTGATCGACCACGCGCCTTGCCCTGTCAC--CAT
EV571985       <-- ..................................................
FD968258       <-- AAGCGTGAGCAGCTTGGTGATGGACCACGCGCCTTGCCCTGTCAC--CAT
EV525633       --> AAGCGTGAGCAGCTTTGTGATCGACCACGCGCCTTGCCCTGTCAC--CAT
EV537679       --> AAGCGTGAGCAGCTTTGTGATCGACCACGCGCCTTGCCCTGTCAC--CAT
EV568011       --> ..................................................
EX888780       --> AAGCGTGAGCAGCTTTGTGATCGACCACGCGCCTTGCCCTGTCAC--CAT
EY907904       --> AAGCGTGAGCAGCTTTGTGATCGACCACGCGCCTTGCCCTGTCAC--CAT
EY941403       --> AAGCGTGAGCAGCTTTGTGATCGACCACGCGCCTTGCCCTGTCAC--CAT
EY949105       --> AAGCGTGAGCAGCTTTGTGATCGACCACGCGCCTTGCCCTGTCAC--CAT
FD557439       --> AAGCGTGAGCAGCTTTGTGATCGACCACGCGCCTTGCCCTGTCAC--CAT
FD981171       --> AAGCGTGAGCAGCTTTGTGATCGACCACGCGCCTTGCCCTGTCAC--CAT
FD556522       --> AAGCGTGAGCAGCTTTGTGATCGACCACGCGCCTTGCCCTGTCAC--CAT
EV534990       --> AAGCGTGAGCAGCTTTGTGATCGACCACGCGCCTTGCCCTGTCAC--CAT
EW717572       --> AAGCGTGAGCAGCTTTGTGATCGACCACGCGCCTTGCCCTGTCAC--CAT
EY900036       --> AAGCGTGAGCAGCTTTGTGATCGACCACGCGCCTTGCCCTGTCAC--CAT
EV566969       --> AAGCGTGAGCAGCTTTGTGATCGACCACGCGCCTTGCCCTGTCAC--CAT
EX902454       --> AAGCGTGAGCAGCTTTGTGATCGACCACGCGCCTTGCCCTGTCAC--CAT
EX749973       --> AAGCGTGAGCAGCTTTGTGATCGACCACGCGCCTTGCCCTGTCAC--CAT
EX888030       --> AAGCGTGAGCAGCTTTGTGATCGACCACGCGCCTTGCCCTGTCAC--CAT

               550    -    600
UN13163        --> TGTCAAGGATGACTAGAAAGAAATGTCTTCTTCGCGCGTATAATCTACCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX900290       <-- TGTCAAGGATGACTAGAAAGAAATGTCTTCTTCGCGCGTATAATCTACCA
EY944683       <-- TGTCAAGGATGACTAGAAAGAAATGTCTTCTTCACGCGTATAATCTACCA
FD553538       <-- TGTCAAGGATGACTAGAAAGAAATGTCTTCTTCGCGCGTATAATCTACCA
EV539767       <-- TGTCAAGGATGACTAGAAAGAAATGTCTTCTTCGCGCGTATAATCTACCA
EY895683       <-- TGTCAAGGACAACTAGAAAGAAATGTCTTCATCGCGCGTATAATCTACCA
EV572827       <-- TGTCAAGGATGACTAGAAAGAAATGTCTTCTTCGCGCGTATAATCTACCA
FD976949       <-- TGTCAAGGATGACTAGAAAGAAATGTCTTCTTCGCGCGTATAATCTACCA
AB447919       <-- TGTCAAGGACAACTAGAAAGAAATGTCTTCATCGCGCGTATAATCTACCA
EY903727       <-- TGTCAAGGATGACTAGAAAGAAATGTCTTCTTCGCGCGTATAATCTACCA
FD552812       <-- TGTCAAGGATGACTAGAAAGAAATGTCTTCTTCGCGCGTATAATCTACCA
EY945608       <-- TGTCAAGGACAACTAGAAAGAAATGTCTTCATCGCGCGTATAATCTACCA
EY936994       <-- TGTCAAGGATGACTAGAAAGAAATGTCTTCTTCGCGCGTATAATCTACCA
FD934759       <-- TGTCAAGGACAACTAGAAAGAAATGTCTTCATCGCGCGTATAATCTACCA
EX753543       <-- TGTCAAGGATGACTAGAAAGAAATGTTTTTTTCGCGCGTATA........
EV571985       <-- ..................................................
FD968258       <-- TGTCAAGGATGACTAGAAAG..............................
EV525633       --> TGTCAAGGATGACTAGAAAGAAATGTCTTCTTCGCGTGTATAATCTACCA
EV537679       --> TGTCAAGGATGACTAGAAAGAAATGTCTTCTTCGCGCGTATAATCTACCA
EV568011       --> ..................................................
EX888780       --> TGTCAAGGATGACTAGAAAGAAATGTCTTCTTCGCGCGTATAATCTACCA
EY907904       --> TGTCAAGGATGACTAGAAAGAAATGTCTTCTTCGCGCGTATAATCTACCA
EY941403       --> TGTCAAGGATGACTAGAAAGAAATGTCTTCTTCGCGCGTATAATCTACCA
EY949105       --> TGTCAAGGATGACTAGAAAGAAATGTCTTCTTCACGCGTATAATCTACCA
FD557439       --> TGTCAAGGATGACTAGAAAGAAATGTCTTCTTCGCGCGTATAATCTACCA
FD981171       --> TGTCAAGGATGACTAGAAAGAAATGTCTTCTTCGCGCGTATAATCTACCA
FD556522       --> TGTCAAGGATGACTAGAAAGAAATGTCTTCTTCGCGCGTATAATCTACCA
EV534990       --> TGTCAAGGATGACTAGAAAGAAATGTCTTCTTCGCGCGTATAATCTACCA
EW717572       --> TGTCAAGGATGACTAGAAAGAAATGTCTTCTTCGCGCGTATAATCTACCA
EY900036       --> TGTCAAGGACAACTAGAAAGAAATGTCTTCATCGCGCGTATAATCTACCA
EV566969       --> TGTCAAGGATGACTAGAAAGAAATGTCTTCTTCGCGCGTATAATCTACCA
EX902454       --> TGTCCAGGACAACTAGAAAGAAATGTCTTCATCGCGCGTATAATCTACCA
EX749973       --> TGTCAAGGATGACTAGAAAGAAATGTCTTCTTCGCGCGTATAATCTACCA
EX888030       --> TGTCAAGGATGACTAGAAAGAAATGTCTTCTTCGCGCGTATAATCTACCA

               600    -    650
UN13163        --> AAAATAATGTCGCAGTTTATGTTTTTAATAAAGAACTTTTTTTCTTGCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX900290       <-- AAAATAATGTCGCAGTTTATGTTTTTAATAAAGAACTTTTTTTCgt....
EY944683       <-- AAAATAATGTCGCAGTTTATGTTTTTAATAAAGAACTTTTTT-CTTGCTT
FD553538       <-- AAAATAATGTCGCAGTTTATGTTTTTAATAAAGAACTTTTTTTCTTGCTT
EV539767       <-- AAAATAATGTCGCAGTTTATGTTTTTAATAAAGAACTTTTTTTCTTGCTT
EY895683       <-- AAA-TAATGTCGCAGTTTATGTTTTCAATAAAGAACTTTTTTTCTTGCcg
EV572827       <-- AAAATAATGTTGCAGTCTATGTTTTTAATAAAGAACTTTTTTTCTTGCTT
FD976949       <-- AAAATAATGTCGCAGTTTATGTTTTTAATAAAGAACTTTTTTTCTTGCTT
AB447919       <-- AAAATAATGTCGCAGTTTATGTTTTCAATAAAGAACTTTTTTTCTc....
EY903727       <-- AAAATAATGTCGCAGTTTATGTTTTTAATAAAGAACTTTTTTTCTTGCTT
FD552812       <-- AAAATAATGTCGCAGTTTATGTTTTTAATAAAGAACTTTTTTTCTTGCTT
EY945608       <-- AAAATAATGTCGCAGTTTATGTTGTCAATAAAGAACTTTTTTTCTTGCTT
EY936994       <-- AAAATAATGTCGCAGTTTATGTTTTTAATAAAGAACTTTTTTTCTTGCTT
FD934759       <-- AAAATAATGTCGCAGTTTATGTTTTCAATAAAGAACTTTTTTTCTTGCTT
EX753543       <-- ..................................................
EV571985       <-- ..................................................
FD968258       <-- ..................................................
EV525633       --> AAAATAATGTCGCAGTTTATGTTTTTAATAAAGAACTTTTTTTCTTGCTT
EV537679       --> AAAATAATGTCGCAGTTTATGTTTTTAATAAAGAACTTTTTTTCTTGCTT
EV568011       --> ..................................................
EX888780       --> AAAATAATGTCGCAGTTTATGTTTTTAATAAAGAACTTTTTTTCTTGCTT
EY907904       --> AAAATAATGTCGCAGTTTATGTTTTTAATAAAGAACTTTTTTTCTTGCTT
EY941403       --> AAAATAATGTCGCAGTTTATGTTTTTAATAAAGAACTTTTTTTCTTGCTT
EY949105       --> AAAATAATGTCGCAGTTTATGTTTTTAATAAAGAACTTTTTT-CTTGCTT
FD557439       --> AAAATAATGTCGCAGTTTATGTTTTTAATAAAGAACTTTTTTTCTTGCTT
FD981171       --> AAAATAATGTCGCAGTTTATGTTTTTAATAAAGAACTTTTTT-CTTGCTT
FD556522       --> AAAAAAATGTCGCAGTTTATGTTTTTAATAAAGAACTTTTTT-CTTGCTT
EV534990       --> AAAATAATGTCGCAGTTTATGTTTTTAATAAAGAACTTTTTTTCTTGCTT
EW717572       --> AAA-TAATGTCGCAGTTTATGTTTTTAATAAAGAACTTTTTTTCTTGTTT
EY900036       --> AAA-TAATGTCGCAGTTTATGTTTTCAATAAAGAACTTTTTTTCTTGCcg
EV566969       --> AAAATAATGTCGCAGTTTATGTTTTTAATAAAGAACTTTTTTTCTTGCTT
EX902454       --> AAAATAATGTCGCAGTTTATGTTTTCAATAAAGAACTTTTTTTCTTGCTT
EX749973       --> AAAATAATGTCGCAGTTTATGTTTTTAATAAAGAACTTTTTTTCTTGCTT
EX888030       --> AAAATAATGTCGCAGTTTATGTTTTTAATAAAGAACTTTTTTTCTTGCT.

               650    -    700
UN13163        --> -GTGTTTGTTCTATTTGAAATATTGACACATAATTTTCGCTTATGTGCGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX900290       <-- ..................................................
EY944683       <-- -GTGTTTGTTCTATTTGAAATATTGACACATAATTTTCGC..........
FD553538       <-- -GTGTTTGTTCTATTTGAAATATTGACACATAATTTTCGCTTATGTGCGC
EV539767       <-- -GTGTTTGTTCTATTTGAAATATT..........................
EY895683       <-- ..................................................
EV572827       <-- -GTGTTTGTTCTATTTGAAATATTGACACATAATTTTCGCCTATGTGCGC
FD976949       <-- -GTGTTTGTTCTATTTGAAATATTGACACATAATTTTCGCTTATGTGCGC
AB447919       <-- ..................................................
EY903727       <-- -GTGTTTGTTCTATTTGAAATATTGACACATAATTTTCG...........
FD552812       <-- -GTGTTTGTTCTATTTGAAATATTGACACATAATTTTCGCTTATGTGCGC
EY945608       <-- -CTGTTTGTTCTATTTGAAATATCGACACCTAATTTTCGCTTATGTTGGC
EY936994       <-- -GTGTTTGTTCTATTTGAATTATTGACACATAATTTTCGCTTATGTGCGC
FD934759       <-- -CTGTTTGTTCTATTTGAAATATCGACACCTAATTTTCGCTT........
EX753543       <-- ..................................................
EV571985       <-- ..................................................
FD968258       <-- ..................................................
EV525633       --> -GTGTTTGTTCTATTTGAAATATTGACACATAATTTTCGCTTATGTGCGC
EV537679       --> -GTGTTTGTTCTATTTGAAATATTGACACAT...................
EV568011       --> ..................................................
EX888780       --> -GTGTTTGTTCTATTTGAAATATTGACACATAATTTTCGCTTATGTGCGC
EY907904       --> -GTGTTTGTTCTATTTGAAATATTGACACATAATTTTCGCTTATGTGCGC
EY941403       --> -GTGTTTGTTCTATTTGAATTATTGACACATAATTTTCGCTTATGTGCGC
EY949105       --> -GTGTTTGTTCTATTTGAAATATTGACACATAATT...............
FD557439       --> -GTGTTTGTTCTATTTGAAATATTGACACATAATTTTCGCTTATGTGCGC
FD981171       --> -GTGTTTGTTCTATTTGAAATATTGACACATAATTTTCGCTTATGTGCGC
FD556522       --> -GTGTTTGTTCTATTTGAAATATTGACACATAATTTTCGCTTATGTGCGC
EV534990       --> -GTGTTTGTTCTATTTGAAATATTGACACATAATTTTCGC..........
EW717572       --> -GTGTTTGTTCTATTTGAAATATTGACACATAATTTTCG...........
EY900036       --> ..................................................
EV566969       --> -GTGTTTGTTCTATTTGAAATATTGACACATAATTTTCGCTTATGTGCGC
EX902454       --> -CTGTTTGTTCTATTTGAAATATCGACACCTAATTT-CGCTTAaaaaa..
EX749973       --> TGTGTTTGTTCTATTTGAAATATTGACACATAATTTTCGC..........
EX888030       --> ..................................................

               700    -    750
UN13163        --> TGA--TAATATTGAGAGGTGGCCTATAAGAGTCCAACGCTCATTCTCAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX900290       <-- ..................................................
EY944683       <-- ..................................................
FD553538       <-- TGA--TAATATTGAGAGGTGGCCTATAAGAGTCCAATGCTCATTCTC...
EV539767       <-- ..................................................
EY895683       <-- ..................................................
EV572827       <-- TGA--TAATATTGAGAGGTGGCCTATAAGAGTCCAACGCTCATTCcc...
FD976949       <-- TGA--TAATATTGAGAGGTGGCCTATAAGAGTCCAACGCTCATTCTC...
AB447919       <-- ..................................................
EY903727       <-- ..................................................
FD552812       <-- TTA--TAATATTGAGAGGTGGCCTATAAGAGTCCAACGCTC.........
EY945608       <-- TGA--CAATATTGAGAAGTGGCCTATAAGAGTCGAACTCTCATTCTC...
EY936994       <-- TGA--TAATATTGAGAGGTGGCCTATAAGAGTCCAACGCTCATTCcc...
FD934759       <-- ..................................................
EX753543       <-- ..................................................
EV571985       <-- ..................................................
FD968258       <-- ..................................................
EV525633       --> TGA--TAATATTGAGAGGTGGCCTATAAGAGTCCAACGCTCATTCTCA..
EV537679       --> ..................................................
EV568011       --> ..................................................
EX888780       --> TGAGATAATATTGAGAGGTGGCCTA.........................
EY907904       --> TGA--TAAaaaaaa....................................
EY941403       --> TGA--TAATATTG.....................................
EY949105       --> ..................................................
FD557439       --> TGA--TAATATTGAGAGGTGGCCTATAAGAGTCCAATGCTCATTCTC...
FD981171       --> TGA--TAATATTGAGAG-TGGCCTATAAGAGTCCAACGCTCATTCTC...
FD556522       --> TTA--TA-TATTGAGAGGTGGCCTATAAGA....................
EV534990       --> ..................................................
EW717572       --> ..................................................
EY900036       --> ..................................................
EV566969       --> TGA--TAATATTGAGAGGTGGCCTATAAGAGTCCAACGCTCATTCTCAAC
EX902454       --> ..................................................
EX749973       --> ..................................................
EX888030       --> ..................................................