RadishBase

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Alignment for radish unigene UN13335

               1      -     51
UN13335        --> GGTTATTGGACCGGCTACTGTTGGAGGTATTCAAGCTGGAGCCTTTAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD573359       <-- ..................................................
EY937009       <-- ..................................................
EW727053       <-- ..................................................
EW727349       <-- ..................................................
EY933711       <-- ..................................................
EX900642       <-- ..................................................
FD556778       --> GGTTATTGGACCGGCTACTGTTGGAGGTATTCAAGCTGGAGCCTTTAAGA
EY941424       --> ..................................................
FD989703       --> ..................................................
EY937427       --> ..................................................
EX889407       --> ..................................................
FD556451       --> ..................................................
EW722360       --> ..................................................
FD571375       --> ..................................................
EW722361       --> ..................................................
EX896762       --> ..................................................

               51     -    101
UN13335        --> TTGGTGACACTGCAGGAACTATTGATAACATTATCCAGTGCAAGCTTTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD573359       <-- ..................................................
EY937009       <-- ..................................................
EW727053       <-- ..................................................
EW727349       <-- ..................................................
EY933711       <-- ..................................................
EX900642       <-- ..................................................
FD556778       --> TTGGTGACACTGCAGGAACTATTGATAACATTATCCAGTGCAAGCTTTAC
EY941424       --> ..................................................
FD989703       --> ..................................................
EY937427       --> ..................................................
EX889407       --> ..................................................
FD556451       --> ..................................................
EW722360       --> ..................................................
FD571375       --> ..................................................
EW722361       --> ..................................................
EX896762       --> ..................................................

               101    -    151
UN13335        --> AGACCTGGATCTGTTGGTTTTGTCTCCAAATCTGGTGGAATGTCTAATGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD573359       <-- ..................................................
EY937009       <-- ..................................................
EW727053       <-- ..................................................
EW727349       <-- ..................................................
EY933711       <-- ..................................................
EX900642       <-- ..................................................
FD556778       --> AGACCTGGATCTGTTGGTTTTGTCTCCAAATCTGGTGGAATGTCTAATGA
EY941424       --> ...................................gGGAATGTCTAATGA
FD989703       --> ..................................................
EY937427       --> ..................................................
EX889407       --> ..................................................
FD556451       --> ..................................................
EW722360       --> ..................................................
FD571375       --> ..................................................
EW722361       --> ..................................................
EX896762       --> ..................................................

               151    -    201
UN13335        --> AATGTACAATACTGTTGCTCGTGTCACTGATGGGATCTATGAAGGGATTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD573359       <-- ..................................................
EY937009       <-- ..................................................
EW727053       <-- ..................................................
EW727349       <-- ..................................................
EY933711       <-- ..................................................
EX900642       <-- ..................................................
FD556778       --> AATGTACAATACTGTTGCTCGTGTCACTGATGGGATCTATGAAGGGATTG
EY941424       --> AATGTACAATACTGTTGCTCGTGTCACTGATGGGATCTATGAAGGGATTG
FD989703       --> gATGTACAATACTGTTGCTCGTGTCACTGATGGGATCTATGAAGGGATTG
EY937427       --> ...............................GGGATCTATGAAGGGATTG
EX889407       --> ..................................................
FD556451       --> ..................................................
EW722360       --> ..................................................
FD571375       --> ..................................................
EW722361       --> ..................................................
EX896762       --> ..................................................

               201    -    251
UN13335        --> CTATTGGTGGAGACGTGTTCCCTGGATCCACTTTGTCTGATCACATCCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD573359       <-- ..................................................
EY937009       <-- ..................................................
EW727053       <-- ..................................................
EW727349       <-- ..................................................
EY933711       <-- ..................................................
EX900642       <-- ..................................................
FD556778       --> CTATTGGTGGAGACGTGTTCCCTGGATCCACTTCGTCTGATCACATCCTG
EY941424       --> CTATTGGTGGAGACGTGTTCCCTGGATCCACTTTGTCTGACCACATCCTA
FD989703       --> CTATTGGTGGAGACGTGTTCCCTGGATCCACTTTGTCTGATCACATCCTG
EY937427       --> CTATTGGTGGAGACGTGTTCCCTGGATCCACTTTGTCTGACCACATCCTA
EX889407       --> ..................................................
FD556451       --> ..................................................
EW722360       --> ..................................................
FD571375       --> ..................................................
EW722361       --> ..................................................
EX896762       --> ..................................................

               251    -    301
UN13335        --> AGGTTTAACAACATCCCACAGATAAAAATGATGGTTGTGCTTGGAGAGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD573359       <-- ..................................................
EY937009       <-- ..................................................
EW727053       <-- ..................................................
EW727349       <-- ..................................................
EY933711       <-- ..................................................
EX900642       <-- ..................................................
FD556778       --> AGGTTTAACAACATCCCACAGATAAAAATGATGGTGGTACTTGGAGAGCT
EY941424       --> AGGTTTAACAACATCCCACAGATAAAAATGATGGTTGTGCTTGGAGAGCT
FD989703       --> AGGTTTAACAACATCCCACAGATAAAAATGATGGTGGTACTTGGAGAGCT
EY937427       --> AGGTTTAACAACATCCCACAGATAAAAATGATGGTTGTGCTTGGAGAGCT
EX889407       --> ..................................................
FD556451       --> ..................................................
EW722360       --> ..................................................
FD571375       --> ..................................................
EW722361       --> ..................................................
EX896762       --> ..................................................

               301    -    351
UN13335        --> TGGAGGGAGAGATGAGTACTCTCTTGTTGAGGCTTTGAAACAGGGGAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD573359       <-- ..................................................
EY937009       <-- ..................................................
EW727053       <-- ..................................................
EW727349       <-- ..................................................
EY933711       <-- ..................................................
EX900642       <-- ..................................................
FD556778       --> TGGAGGAAGAGATGAGTACTCTCTTGTTGAGGCTTTGAAACAGGGGAAAG
EY941424       --> TGGAGGGAGAGATGAGTACTCTCTTGTTGAGGCTCTGAAACAGGGGAAAG
FD989703       --> TGGAGGAAGAGATGAGTACTCTCTTGTTGAGGCTTTGAAACAGGGGAAAG
EY937427       --> TGGAGGGAGAGATGAGTACTCTCTTGTTGAGGCTCTGAAACAGGGGAAAG
EX889407       --> ..................................................
FD556451       --> ..................................................
EW722360       --> ..................................................
FD571375       --> ..................................................
EW722361       --> ..................................................
EX896762       --> ..................................................

               351    -    401
UN13335        --> TGAATAAACCTGTTGTTGCTTGGGTCAGTGGGACTTGTGCACGTCTCTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD573359       <-- ..................................................
EY937009       <-- ..................................................
EW727053       <-- ..................................................
EW727349       <-- ..................................................
EY933711       <-- ..................................................
EX900642       <-- ..................................................
FD556778       --> TGAATAAACCTGTTGTTGCTTGGGTCAGTGGGACTTGTGCACGTCTCTTC
EY941424       --> TGAACAAACCTGTTGTTGCTTGGGTCAGTGGGACTTGTGCACGTCTCTTC
FD989703       --> TGAATAAACCTGTTGTTGCTTGGGTCAGTGGGACTTGTGCACGTCTCTTC
EY937427       --> TGAACAAACCTGTTGTTGCTTGGGTCAGTGGGACTTGTGCACGTCTCTTC
EX889407       --> gGAATAAACCTGTTGTTGCTTGGGTCAGTGGGACTTGTGCACGTCTCTTC
FD556451       --> ................gGCTTGGGTCAGTGGGACTTGTGCACGTCTCTTC
EW722360       --> ..................................................
FD571375       --> ..................................................
EW722361       --> ..................................................
EX896762       --> ..................................................

               401    -    451
UN13335        --> AAGTCTGAAGTACAGTTTGGTCACGCGGGTGCTAAAAGTGGTGGCGAGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD573359       <-- ..................................................
EY937009       <-- ..................................................
EW727053       <-- ..................................................
EW727349       <-- ..................................................
EY933711       <-- ..................................................
EX900642       <-- ..................................................
FD556778       --> AAGTCTGAAGTACAGTTTGGTTACGCGGGTGCTAAAAGTGGTGGCGAGAT
EY941424       --> AAGTCTGAAGTACAGTTTGGTCACGCGGGTGCTAAAAGTGGTGGCGAGAT
FD989703       --> AAGTCTGAAGTACAGTTTGGTCACGCGGGTGCTAAAAGTGGTGGCGAGAT
EY937427       --> AAGTCTGAAGTACAGTTTGGTCACGCGGGTGCTAAAAGTGGTGGCGAGAT
EX889407       --> AAGTCTGAAGTGCAGTTTGGTCACGCGGGTGCTAAAAGTGGTGGCGAGAT
FD556451       --> AAGTCTGAAGTACAGTTTGGTCACGCGGGTGCTAAAAGTGGTGGCGAGAT
EW722360       --> ..................................................
FD571375       --> ..................................................
EW722361       --> ..................................................
EX896762       --> ..................................................

               451    -    501
UN13335        --> GGAGTCTGCACAAGCCAAGAATCAAGCTCTCATGGATGCTGGAGCCATTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD573359       <-- ..................................................
EY937009       <-- ..................................................
EW727053       <-- ..................................................
EW727349       <-- ..................................................
EY933711       <-- ..................................................
EX900642       <-- ..................................................
FD556778       --> GGAGTCTGCACAAGCCAAGAATCAAGCTCTCATGGATGCTGGAGCCATTG
EY941424       --> GGAGTCTGCACAAGCCAAGAATCAAGCTCTCATGGATGCTGGAGCCATTG
FD989703       --> GGAGTCTGCACAAGCCAAGAATCAAGCTCTCATGGATGCTGGAGCCATTG
EY937427       --> GGAGTCTGCACAAGCCAAGAATCAAGCTCTCATGGATGCTGGAGCCATTG
EX889407       --> GGAGTCTGCACAAGCCAAGAATCAAGCTCTTATGGATGCTGGAGCCATTG
FD556451       --> GGAGTCTGCACAATCCAAGAATCAAGCTCTCATGGATGCTGGAGCCATTG
EW722360       --> ..................................................
FD571375       --> ..................................................
EW722361       --> ..................................................
EX896762       --> ..................................................

               501    -    551
UN13335        --> TTCCCACTTCATTCGAAGCTCTTGAAGCTGCAATCAAAGAGACGTTTGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD573359       <-- ..................................................
EY937009       <-- ..................................................
EW727053       <-- ..................................................
EW727349       <-- ..................................................
EY933711       <-- ..................................................
EX900642       <-- ..................................................
FD556778       --> TTCCCACTTCATTCGAAGCTCTTGAAGCTGCAATCAAAGAGACGTTTGAG
EY941424       --> TTCCCACTTCATTCGAAGCTCTTGAAGCTGCAATCAAAGAGACGTTTGAG
FD989703       --> TTCCCACTTCATTCGAAGCTCTTGAAGCTGCAATCAAAGAGACGTTTGAG
EY937427       --> TTCCCACTTCATTCGAAGCTCTTGAAGCTGCAATCAAAGAGACGTTTGAG
EX889407       --> TTCCCACTTCATTCGAAGCTCTCGAATCTGCAATCAAAGAGACTTTTGAG
FD556451       --> TTCCCACTTCATTCGAAGCTCTTGAAGCTGCAATCAAAGAGACGTTTGAG
EW722360       --> .............gGAAGCTCTTGAAGCTGCAATCAAAGAGACGTTTGAG
FD571375       --> ..................................................
EW722361       --> ..................................................
EX896762       --> ..................................................

               551    -    601
UN13335        --> AAACTGGTTGAAGAAGGAAAGGTCTCTCCAATAAAGGAAGTCACTCCTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD573359       <-- ..................................................
EY937009       <-- ..................................................
EW727053       <-- ..................................................
EW727349       <-- ..................................................
EY933711       <-- ..................................................
EX900642       <-- ..................................................
FD556778       --> AAACTGGTTGAAGAAAGAAAGGTCTCTCCAATAAAGGAAGTCACTCCTCC
EY941424       --> AAACTGGTTGAAGAAGGAAAGGTCTCTCCAATAAAGGAAGTCACTCCTCC
FD989703       --> AAACTGGTTGAAGAAGGAAAGGTCTCTCCAATAAAGGAAGTCACTCCTCC
EY937427       --> AAACTGGTTGAAGAAGGAAAGGTCTCTCCAATAAAGGAAGTCACTCCTCC
EX889407       --> AAACTAGTTGAAGAAGGAAAGGTCTCTCCAATAAAGGAAGTCACTCCTCC
FD556451       --> AAACTGGTTGAAGAAGGAAAGGTCTCTCCAATAAAGGAAGTCACTCCTCC
EW722360       --> TAACTGGTTGAAGAAGGAAAGGTCTCTCCAATAAAGGAAGTCACTCCTCC
FD571375       --> ..................................................
EW722361       --> ..................................................
EX896762       --> ..................................................

               601    -    651
UN13335        --> ACAGATCCCTGAGGATCTCAGTTCTGCAATCAAGAGTGGGAAAGTCCGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD573359       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY937009       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EW727053       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EW727349       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY933711       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX900642       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD556778       --> ACAGATCCCGGAGGATCTCAGTTCTGCAATCAAGAGTGGGAAAGTCCGAG  Raphanus raphanistrum subsp. landra
EY941424       --> ACAGATCCCTGAGGATCTCAGTTCTGCAATCAAGAGTGGGAAAGTCCGAG  Raphanus sativus cv Early Scarlet Globe
FD989703       --> ACAGATCCCGGAGGATCTCAGTTCTGCAATCAAGAGTGGGAAAGTCCGAG  Raphanus raphanistrum subsp. landra
EY937427       --> ACAGATCCCTGAGGATCTCAGTTCTGCAATCAAGAGTGGGAAAGTCCGAG  Raphanus sativus cv Early Scarlet Globe
EX889407       --> ACAGATCCCCGAGGATCTCAGTTCTGCAATCAAGAGTGGGAAAGTCCGAG  Raphanus sativus var. oleiformis
FD556451       --> ACAGATCCCGGAGGATCTCAGTTCTGCAATCAAGAGTGGGAAAGTCCGAG  Raphanus raphanistrum subsp. landra
EW722360       --> ACAGATCCCTGAGGATCTCAGTTCTGCAATCAAGAGTGGGAAAGTCCGAG  Raphanus sativus cv Early Scarlet Globe
FD571375       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EW722361       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX896762       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               651    -    701
UN13335        --> CTCCTACTCACATCATCTCCACCATTTCTGATGACAGAGGGGAGGAACCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD573359       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY937009       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EW727053       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EW727349       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY933711       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX900642       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD556778       --> CTCCTACTCACATTATCTCCACCATTTCTGATGACAGAGGG-AGGAACCA  Raphanus raphanistrum subsp. landra
EY941424       --> CTCCTACTCACATCATCTCCACCATTTCTGATGACAGAGGGGAGGAACCA  Raphanus sativus cv Early Scarlet Globe
FD989703       --> CTCCTACTCACATTATCTCCACCATTTCTGATGACAGAGGGGAGGAACCA  Raphanus raphanistrum subsp. landra
EY937427       --> CTCCTACTCACATCATCTCCACCATTTCTGATGACAGAGGGGAGGAACCA  Raphanus sativus cv Early Scarlet Globe
EX889407       --> CTCCTACTCACATCATCTCCACCATTTCTGATGATAGGGGGGAGGAACCA  Raphanus sativus var. oleiformis
FD556451       --> CTCCTACTCACATTATCTCCACCATTTCTGATGACAGAGGGGAGGAACCA  Raphanus raphanistrum subsp. landra
EW722360       --> CTCCTACTCACATCATCTCCACCATTTCTGATGACAGAGGGGAGGAACCA  Raphanus sativus cv Early Scarlet Globe
FD571375       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EW722361       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX896762       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               701    -    751
UN13335        --> TGCTATGCTGGTGTTCCGATGTCTTCCATCATCGAACAAGGCTTAGGAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD573359       <-- ..................................................
EY937009       <-- ..................................................
EW727053       <-- ..................................................
EW727349       <-- ..................................................
EY933711       <-- ..................................................
EX900642       <-- ..................................................
FD556778       --> TGCTATGC..........................................
EY941424       --> TGCTATGCTGGTGTTCCGATGTCTTCCATCATCGAA..............
FD989703       --> TGCTATGCTGGTGTTCCGATGTCTTCCATCATCGAACAAGGCTTAGGAGT
EY937427       --> TGCTATGCTGGTGTTCCGATGTCTTCCATCATCGAACAAGGCTTAGGAGT
EX889407       --> TGCTATGCTGGTGTTCCGATGTCTTCCATCATCGAACAAGGCTTAGGAGT
FD556451       --> TGCTATGCTGGTGTTCCGATGTCTTCCATCATCGAACAAGGCTTAGGAGT
EW722360       --> TGCTATGCTGGTGTTCCGATGTCTTCCATCATCGAACAAGGC........
FD571375       --> ..................................................
EW722361       --> ..................................................
EX896762       --> ..................................................

               751    -    801
UN13335        --> TGGTGATGTCATCTCCCTTCTATGGTTCAAACGTAGCCTTCCTCGTTACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD573359       <-- ..............................ACGTAGC-TTCCTCGTTACT
EY937009       <-- .......................................TCCTCGTTACT
EW727053       <-- ............................................GTTACT
EW727349       <-- ..................................................
EY933711       <-- ..................................................
EX900642       <-- ..................................................
FD556778       --> ..................................................
EY941424       --> ..................................................
FD989703       --> TGGTGATGTCATCTCCCTTCTATGGTTCAAACGTAGCCTTCCTCGTTACT
EY937427       --> TGGTGATGTCATCTCCCTTCTATGGTTCAAACGTAGCCTTCCTCGTTACT
EX889407       --> TGGTGATGTCATTTCCCTTCTATGGTTCAAACGTAGCCTTCCTCGTTACT
FD556451       --> TGGTGATGTCATCTCCCTTCTATGGTTCAAACGTAGCCTTCCTCGTTACT
EW722360       --> ..................................................
FD571375       --> ..................................................
EW722361       --> ..................................................
EX896762       --> ..................................................

               801    -    851
UN13335        --> GTACAAAATTCATTGAGATGTGCATAATGCTGTGTGCTGATCATGGTCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD573359       <-- GTACAAAATTCATTGAGATGTGCATAATGC-GTGTGCTGATCATGGTCCA
EY937009       <-- GTACAAAATTCATTGAGATGTGCATAATGCTGTGTGCTGATCATGGTCCA
EW727053       <-- GTACAAAATTCATTGAGATGTGCATAATGCTGTGTGCTGATCATGGTCCA
EW727349       <-- .........TCATTGAGATGTGCATAATGCTGTGTGCTGATCATGGTCCA
EY933711       <-- .................ATGTGCATAATGCTATGTGCTGATCATGGTCCA
EX900642       <-- ..................................................
FD556778       --> ..................................................
EY941424       --> ..................................................
FD989703       --> GTACAAA-TTCATTGAGATGTGCATAATGCTGTGTGCTGATCATGGTCCA
EY937427       --> GTACAAAATTCATTGAGATGTGCATAATGCTATGTGCTGATCATG.....
EX889407       --> GTACAAAATTCATTGAGATGTGCATAATGCTGTGTGCTGATCATGGTCCA
FD556451       --> GTACAAAATTCATTGAGATGTGCATAATGCTGTGTGCTGATCATGGTCCA
EW722360       --> ..................................................
FD571375       --> ..................................................
EW722361       --> ..................................................
EX896762       --> ..................................................

               851    -    901
UN13335        --> TGCGTCTCGGGCGCTCACAACACCATTGTGACAGCAAGAGCAGGCAAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD573359       <-- TGCGTCTCGGGCGCTCACAACACCATTGTGACGGCAAGAGCAGGCAAAGA
EY937009       <-- TGCGTCTCGGGCGCTCACAACACCATTGTGACAGCAAGAGCAGGCAAAGA
EW727053       <-- TGCGTCTCGGGCGCTCACAACACCATTGTGACAGCAAGAGCAAGCAAAGA
EW727349       <-- TGCGTCTCGGGCGCTCACAACACCATTGTGACAGCAAGAGCAAGCAAAGA
EY933711       <-- TGCGTCTCGGGCGCTCACAACACCATTGTGACGGCAAGAGCAGGCAAAGA
EX900642       <-- ..................................................
FD556778       --> ..................................................
EY941424       --> ..................................................
FD989703       --> TGCGTCTCGG-CGCTCACAAC.............................
EY937427       --> ..................................................
EX889407       --> TGCGTCTCGGGAGCTCACAACACCATTGTGACAGCAAGAGTAGGCAAAGA
FD556451       --> TGCGTCTCGGGCGCTCACAACACCATTGTGACAGCAAGAGCAGGCAAAGA
EW722360       --> ..................................................
FD571375       --> .........................................gGGCAAAGA
EW722361       --> ..................................................
EX896762       --> ..................................................

               901    -    951
UN13335        --> CCTCGTCTCAAGTCTTGTCTCTGGTTTATTAACCATTGGCCCTAGATTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD573359       <-- CCTCGTCTCAAGTCTTGTCTCTGGTTTATTAACCATTGGCCCTAGATTCG
EY937009       <-- CCTCGTCTCAAGTCTTGTCTCTGGTTTATTAACCATTGGCCCTAGATTCG
EW727053       <-- CCTCGTCTCAAGTCTTGTCTCTGGTTTATTAACCATTGGCCCTAGATTCG
EW727349       <-- CCTCGTCTCAAGTCTTGTCTCTGGTTTATTAACCATTGGCCCTAGATTCG
EY933711       <-- CCTCGTCTCAAGTCTTGTCTCTGGTTTATTAACCATTGGCCCTAGATTCG
EX900642       <-- ..................................................
FD556778       --> ..................................................
EY941424       --> ..................................................
FD989703       --> ..................................................
EY937427       --> ..................................................
EX889407       --> CCTTGTCTCAAGTCTTGTCTCTGGTTTATTAACCATTGGCCCTAGATTCG
FD556451       --> CCTTGTCTCAAGTCTTGTCTCAGGTTTATTAACCATTGGCCCTAGATTCG
EW722360       --> ..................................................
FD571375       --> CCTCGTCTCAAGTCTTGTCTCTGGTTTATTAACCATTGGCCCTAGATTCG
EW722361       --> ..................................................
EX896762       --> ..................................................

               951    -   1001
UN13335        --> GTGGTGCCATTGATGACGCTGCTAGATACTTCAAGGACGCTTGTGACAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD573359       <-- GTGGTGCCATTGATGACGCTGCTAGATACTTCAAGGACGCTTGTGACAGG
EY937009       <-- GTGGTGCCATTGATGACGCTGCTAGATACTTCAAGGACGCTTGTGACAGG
EW727053       <-- GTGGTGCCATTGATGACGCTGCTAGATACTTCAAGGACGCTTGTGACAGG
EW727349       <-- GTGGTGCCATTGATGACGCTGCTAGATACTTCAAGGACGCTTGTGACAGG
EY933711       <-- GTGGTGCCATTGATGACGCTGCTAGATACTTCAAGGACGCTTTTGACAGG
EX900642       <-- ..................................................
FD556778       --> ..................................................
EY941424       --> ..................................................
FD989703       --> ..................................................
EY937427       --> ..................................................
EX889407       --> GTGGTGCC..........................................
FD556451       --> GTGGTGCCATTGATGACGCTGCTAGATACTTCAAGGACGCTTGTGACAGG
EW722360       --> ..................................................
FD571375       --> GTGGTGCCATTGATGACGCCGCTAGATACTTCAAGGACGCTTGTGACAGG
EW722361       --> ..................................................
EX896762       --> ..................................................

               1001   -   1051
UN13335        --> AACCTCACACCTTATGAGTTCGTTGAGGGAATGAAGAAGAAGGGAATCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD573359       <-- AACCTCACACCTTATGAGTTCGTTGAGGGAATGAAGAAGAAGGGAATCAG
EY937009       <-- AACCTCACACCTTATGAGTTCGTTGAGGGAATGAAGAAGAAGGGAATCAG
EW727053       <-- AACCTCACACCTTATGAGTTCGTTGAGGGAATGAAGAAGAAGGGAATCAG
EW727349       <-- AACCTCACACCTTATGAGTTCGTTGAGGGAATGAAGAAGAAGGGAATCAG
EY933711       <-- AACCTCACACCTTATGAGTTCGTTGAGGGAATGAAGAAGAAGGGAATCAG
EX900642       <-- ..................................................
FD556778       --> ..................................................
EY941424       --> ..................................................
FD989703       --> ..................................................
EY937427       --> ..................................................
EX889407       --> ..................................................
FD556451       --> AACCTCACACCTTATGAGTTCGTTGAGGGAATGAAGAAGAAGGGAATCAG
EW722360       --> ..................................................
FD571375       --> AACCTCACACCTTATGAGTTCGTTGAGGGAATGAAGAAGAAGGGAATCAG
EW722361       --> ..................................................
EX896762       --> ..................................................

               1051   -   1101
UN13335        --> AGTCCCTGGGATTGGACACAGGATCAAGAGCAGAGACAACAGAGACAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD573359       <-- AGTCCCTGGGATTGGACACAGGATCAAGAGCAGAGACAACAGAGACAAGA
EY937009       <-- AGTCCCTGGGATTGGACACAGGATCAAGAGTAGAGACAACAGAGACAAGA
EW727053       <-- AGTCCCTGGGATTGGACACAGGATCAAGAGCAGAGACAACAGAGACAAGA
EW727349       <-- AGTCCCTGGGATTGGACACAGGATCAAGAGCAGAGACAACAGAGACAAGA
EY933711       <-- AGTCCCTGGGATTGGACACAGGATCAAGAGCAGAGACAACAGAGACAAGA
EX900642       <-- ........................gAAGAGCAGAGACAACAGAGACAAGA
FD556778       --> ..................................................
EY941424       --> ..................................................
FD989703       --> ..................................................
EY937427       --> ..................................................
EX889407       --> ..................................................
FD556451       --> AGTCCCTGGGATGGGACACAG-ATCAAGAGCAGAGACAACAGAGACAAGA
EW722360       --> ..................................................
FD571375       --> AGTCCCTGGGATTGGACA--GGATCAAGAGCAGAGACAACAGAGACAAGA
EW722361       --> ...CCCTGGGATTGGACACAGGATCAAGAGCAGAGACAACAGAGACAAGA
EX896762       --> ........................gAAGAGCAGAGACAACAGAGACAAGA

               1101   -   1151
UN13335        --> GAGTGGAGCTGCTCC-AGAAATTTGCTAGGTCTAACTTCCCATCAGTGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD573359       <-- GAGTGGAGCTGCTCC-AGAAATTTGCTAGGTCTAACTTCCCATCAGTAAA
EY937009       <-- GAGTGGAGCTGCTCC-AGAAATTTGCTAGGTCTAACTTCCCATCAGTGAA
EW727053       <-- AAGTGGAGCTGCTCC-AGAAATTTGCTAGGTCTAATTTCCCATCAGTGAA
EW727349       <-- AAGTGGAGCTGCTCC-AGAAATTTGCTAGGTTTAATTTCCCATCAGTGAA
EY933711       <-- GAGTGGAGCTGCTCC-AGAAATTTGCTAGGTCTAACTTCCCATCAGTGAA
EX900642       <-- GAGTGGAGCTGCTCC-AGAAATTTGCTAGGTCTAACTTCCCATCAGTGAA
FD556778       --> ..................................................
EY941424       --> ..................................................
FD989703       --> ..................................................
EY937427       --> ..................................................
EX889407       --> ..................................................
FD556451       --> GAGTGGAGCTGCTC--AGAAATTTGCTAGGTCTA-CTTCTCATCAGTGAA
EW722360       --> ..................................................
FD571375       --> GAGTGGAGCTGCTCC-AGAAATTTGCTAGGTCTAACTTCCCATCAGTGAA
EW722361       --> AAGTGGAGCTGCTCCCAGAAATTTGCTAGGTCTAATCTCCCATCAGTGAA
EX896762       --> GAGTGGAGCTGCTCC-AGAAATTTGCTAGGTCTAACTTCCCATCAGTGAA

               1151   -   1201
UN13335        --> GTACATGGAGTACGCAGTAACC-GTGGAGAGCTACACGCTCTCAAAGGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD573359       <-- GTACATGGAGTACGCAGTAACC-GTGGAGAGCTACACGCTCTCAAAGGCC
EY937009       <-- GTACATGGAGTACGCAGTAACC-GTGGAGAGCTACACGCTCTCAAAGGCC
EW727053       <-- GTACATGGAGTACGCAGTAACC-GTGGAGAGCTACACGCTCTCAAAGGCC
EW727349       <-- GTACATGGAGTACGCAGTAACC-GTGGAGAGCTACACGCTCTCAAAGGCC
EY933711       <-- GTACATGGAGTACGCAGTAACC-GTGGAGAGCTACACGCTCTCAAAGGCC
EX900642       <-- GTACATGGAGTACGCAGTAACC-GTGGAGAGCTACACGCTCTCAAAGGCC
FD556778       --> ..................................................
EY941424       --> ..................................................
FD989703       --> ..................................................
EY937427       --> ..................................................
EX889407       --> ..................................................
FD556451       --> GTACATGGAGTACGCAGTAAC--GTGGAAAGCTACACGCTCTC.......
EW722360       --> ..................................................
FD571375       --> GTACATGGAGTACGCAGTAACC-GTGGAGAGCTACACGCTCTCAAAGGCC
EW722361       --> GTACATGGAGTACGCAGTAACCCGTGGAGAGCTACACGCTCTCAAAG-CC
EX896762       --> GTACATGGAGTACGCAGTAACC-GTGGAGAGCTACACGCTCTCAAAGGCC

               1201   -   1251
UN13335        --> AACAACCTCGTACTCAACGTTGATGGAGCCATTGGGTCTCTCTTCTTGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD573359       <-- AACAACCTCGTACTCAACGTTGATGGAGCCATTGGGTCTCTCTTCTTGGA
EY937009       <-- AACAACCTCGTACTCAACGTTGATGGAGCCATTGGGTCTCTCTTCTTGGA
EW727053       <-- AACAACCTCGTACTCAACGTTGATGGAGCCATTGGGTCTCTCTTCTTGGA
EW727349       <-- AACAACCTCGTACTCAACGTTGATGGAGCCATTGGGTCTCTCTTCTTGGA
EY933711       <-- AACAACCTCGTACTCAACGTTGATGGAGCCATTGGGTCTCTCTTCTTGGA
EX900642       <-- AACAACCTCGTACTCAACGTTGATGGAGCCATTGGGTCTCTCTTCTTGGA
FD556778       --> ..................................................
EY941424       --> ..................................................
FD989703       --> ..................................................
EY937427       --> ..................................................
EX889407       --> ..................................................
FD556451       --> ..................................................
EW722360       --> ..................................................
FD571375       --> AACAACCTCGTACTCAACGTTGATGGAGCCATTGGGTCTCTCTTCTTGGA
EW722361       --> AACAACCTCGTACTCAACGTTGATGGAGCCATTGGGTCTCTCTTCTTGGA
EX896762       --> AACAACCTCGTACTCAACGTTGATGGAGCCATTGGGTCTCTCTTCTTGGA

               1251   -   1301
UN13335        --> CCTTCTAGCTGGAAGTGGGATGTTCACTAAGCAAGAGATCGATGAGATTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD573359       <-- CCTTCTAGCTGGAAGTGGGATGTTCACTAAGCAGGAGATCGATGAGATTG
EY937009       <-- CCCTCTAGCTGGAAGTGGGATGTTCACTAAGCAAGAGATCGATGAGATTG
EW727053       <-- CCTTCTAGCTGGAAGTGGGATGTTCACTAAGCAAGAGATCGATGAGATTG
EW727349       <-- CCTTCTAGCTGGAAGTGGGATGTTCACTAAGCAAGAGATCGATGAGATTG
EY933711       <-- CCTTCTAGCTGGAAGTGGGATGTTCACTAAGCAAGAGATCGATGAGATTG
EX900642       <-- CCTTCTAGCTGGAAGTGGGATGTTCACTAAGCAAGAGATCGATGAGATTG
FD556778       --> ..................................................
EY941424       --> ..................................................
FD989703       --> ..................................................
EY937427       --> ..................................................
EX889407       --> ..................................................
FD556451       --> ..................................................
EW722360       --> ..................................................
FD571375       --> CCTTCTAGCTGGAAGTGGGATGTTCACTAAGCAAGAGATCGATGAGATTG
EW722361       --> CCTTCTAGCTG.......................................
EX896762       --> CCTTCTAGCTGGAAGTGGGATGTTCACTAAGCAAGAGATCGATGAGATTG

               1301   -   1351
UN13335        --> TTCAGATCGGTTACCTCAACGGTCTCTTTGTTCTTGCTCGTTCCATCGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD573359       <-- TTCAGATCGGTTACCTCAACGGTCTCTTTGTTCTTGCTCGTTCCATCGGT
EY937009       <-- TTCAGATCGGTTACCTCAACGGTCTCTTTGTTCTTGCTCGTTCCATCGGT
EW727053       <-- TTCAGATCGGTTACCTCAACGGTCTCTTTGTTCTTGCTCGTTCCATCGGT
EW727349       <-- TTCAGATCGGTTACCTCAACGGTCTCTTTGTTCTTGCTCGTTCCATCGGT
EY933711       <-- TTCAGATCGGTTACCTCAACGGTCTCTTTGTTCTTGCTCGTTCCATCGGT
EX900642       <-- TTCAGATCTGTTACCTCAACGGTCTCTTTGTTCTTGCTCGTTCCATCGGT
FD556778       --> ..................................................
EY941424       --> ..................................................
FD989703       --> ..................................................
EY937427       --> ..................................................
EX889407       --> ..................................................
FD556451       --> ..................................................
EW722360       --> ..................................................
FD571375       --> TTCAGATCGGTTACCTCAACGGTCTCTTTGTTCTTGCTCGTTCCATCGGT
EW722361       --> ..................................................
EX896762       --> TTCAGATCTGTTACCTCAACGGTCTCTTTGTTCTTGCTCGTTCCATCGGT

               1351   -   1401
UN13335        --> TTGATTGGGCACACATTTGATCAGAAGAGGTTGAAGCAGCCACTTTACCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD573359       <-- TTGATTGGGCACACATTTGATCAGAAGAGGTTGAAGCAGCCACTTTACCG
EY937009       <-- TTGATTGGGCACACATTTGATCAGAAGAGGTTGAAGCAGCCACTTTACCG
EW727053       <-- TTGATTGGGCACACATTTGATCAGAAGAGGTTGAAGCAGCCACTTTACCG
EW727349       <-- TTGATTGGGCACACATTTGATCAGAAGAGGTTGAAGCAGCCACTTTACCG
EY933711       <-- TTGATTGGGCACACATTTGATCAGAAGAGGTTGAAGCATCCACTTTACCG
EX900642       <-- TTGATTGGGCACACATTTGATCAGAAGAGGTTGAAGCAGCCACTTTACCG
FD556778       --> ..................................................
EY941424       --> ..................................................
FD989703       --> ..................................................
EY937427       --> ..................................................
EX889407       --> ..................................................
FD556451       --> ..................................................
EW722360       --> ..................................................
FD571375       --> TTGATTGGGCACACATTTGATCAGAAGAGGTTGAAGCAGCCACTTTACCG
EW722361       --> ..................................................
EX896762       --> TTGATTGGGCACACATTTGATCAGAAGAGGTTGAAGCAGCCACTTTACCG

               1401   -   1451
UN13335        --> TCACCCATGGGAAGATGTGTTGTACACCAAGTGAAAAACTCATCTCAGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD573359       <-- TCACCCATGGGAAGATGTGTTGTACACCAAGTGAAAAACTCATCTCAGCT
EY937009       <-- TCACCCATGGGAAGATGTGTTGTACACCAAGTGAAAAACTCATCTCAGCT
EW727053       <-- TCACCCATGGGAAGATGTGTTGTACACCAAGTGAAAAACCCATCTCAGCT
EW727349       <-- TCACCCATGGGAAGATGTGTTGTACACCAAGTGAAAAACCCATCTCAGCT
EY933711       <-- TCACCCATGGGAAGATGTGTTGTACACCAAGTGAAAAACTCATCTCAGCT
EX900642       <-- TCACCCATGGGAAGATGTGTTGTACACCAAGTGAAAAACTCATCTCAGCT
FD556778       --> ..................................................
EY941424       --> ..................................................
FD989703       --> ..................................................
EY937427       --> ..................................................
EX889407       --> ..................................................
FD556451       --> ..................................................
EW722360       --> ..................................................
FD571375       --> TCACCCATGGGAAGATGTGTTGTACACCAAGTGAAAAACTCATCTCAGCT
EW722361       --> ..................................................
EX896762       --> TCACCCATGGGAAGATGTGTTGTACACCAAGTGAAAAACTCATCTCAGCT

               1451   -   1501
UN13335        --> CAGCTTTGTTTTTGTTGTTAAATTCCTCAAATTAATTAGCTTTTGCATTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD573359       <-- CAGCTTTGTTTTTGTTGTTAAATTCCTCAAATTAATTAGCTTTTGCATTC
EY937009       <-- CAGCTTTGTTTTTGTTGTTAAATTCCTCAAATTAATTAGCTTTTGCATTC
EW727053       <-- CAGCTTTGTTTTTGTTGTTAAATTCCTCAAATTAATTAGCTTTTGCATTC
EW727349       <-- CAGCTTTGTTTTTGTTGTTAAATTCCTCAAATTAATTAGCTTTTGCATTC
EY933711       <-- CAGCTTTGTTTTTGTTGTTAAATTCCTCAAATTAATTAGCTTTTGCATTC
EX900642       <-- CAGCTTTGTTTTTGTTGTTAAATTCCTCAAATTAATTAGCTTTTGCATTC
FD556778       --> ..................................................
EY941424       --> ..................................................
FD989703       --> ..................................................
EY937427       --> ..................................................
EX889407       --> ..................................................
FD556451       --> ..................................................
EW722360       --> ..................................................
FD571375       --> CAGCTTTGTTTTTGTTGTTAAATTCCTCAAATTAATTAGCTTTTGCATTC
EW722361       --> ..................................................
EX896762       --> CAGCTTTGTTTTTGTTGTTAAATTCCTCAAATTAATTAGCTTTTGCATTC

               1501   -   1551
UN13335        --> TTCTGAGAGATGTTACTACTAAAAAATGCATATCTATGCTCTTCTGTTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD573359       <-- TTCTGAGAGATGTTACTACTAAAAAATGCATATCTATGCTCTTCTGTTTT
EY937009       <-- TTCTGAGAGATGTTACTACTAAAAAATGCATATCTATGCTCTTCTGTTTT
EW727053       <-- TTTTGAGAGATGTTACTACTAAAAAATGCATATCTATGCTCTTCTGTTTT
EW727349       <-- TTTTGAGAGATGTTACTACTAAAAAATGCATATCTATGCTCTTCTGTTTT
EY933711       <-- TTCTGAGAGATGTTACTACTAAAAAATGCATATCTATGCTCTTCTGTT..
EX900642       <-- TTCTGAGAGATGTTACTACTAAAAAATGCATATCTATGCTCTTCTGTTTT
FD556778       --> ..................................................
EY941424       --> ..................................................
FD989703       --> ..................................................
EY937427       --> ..................................................
EX889407       --> ..................................................
FD556451       --> ..................................................
EW722360       --> ..................................................
FD571375       --> TTCTGAGAGATGTTACTACTAAAAAATGCATATCTATGCTCTTCTGTTTT
EW722361       --> ..................................................
EX896762       --> TTCTGAGAGATGTTACTACTAAAAAATGCATATCTATGCTCTTCTGTTTT

               1551   -   1601
UN13335        --> CTTTTGTTGCGATGTTATGTTTACTTTCTTATGCTTTTCATTTATCTGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD573359       <-- CTTTTGTTGCGATGTTATGTTTACTTTCTTATGCTTTTCATTTATCTGAA
EY937009       <-- CTTTTGTTGCGATGTTATGTTTACTTTCTTATGCTTTTCATTTATCTGAA
EW727053       <-- CTTTTGTTGCGATGTTATGTTTACTTTCTTATGCTTTTCATTTATCTGAA
EW727349       <-- CTTTTGTTGCGATGTTATGTTTACTTTCTTATGCTTTTCATTTATCTGAA
EY933711       <-- ..................................................
EX900642       <-- CTTTTGTTGCGATGTTATGTTTACTTTCTTATGCTTTTCATTTATCTGAA
FD556778       --> ..................................................
EY941424       --> ..................................................
FD989703       --> ..................................................
EY937427       --> ..................................................
EX889407       --> ..................................................
FD556451       --> ..................................................
EW722360       --> ..................................................
FD571375       --> CTTTTGTTGCGATGTTATGTTTACTTTCTTATGCTTTTCATTTATCTGAA
EW722361       --> ..................................................
EX896762       --> CTTTTGTTGCGATGTTATGTTTACTTTCTTATGCTTTTCATTTATCTGA-

               1601   -   1651
UN13335        --> CTTTTATCAACTGAGATATTCACTTCTTCTTCTTACCTTATATAAGTTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD573359       <-- CTTTTATCAACTGAGATATTCACTTCT.......................
EY937009       <-- CTTTTATCAACTGAGAT.................................
EW727053       <-- CTTTTATCAACTGAGAT.................................
EW727349       <-- CTTTTATCAACTGAGAT.................................
EY933711       <-- ..................................................
EX900642       <-- CTTTTAgc..........................................
FD556778       --> ..................................................
EY941424       --> ..................................................
FD989703       --> ..................................................
EY937427       --> ..................................................
EX889407       --> ..................................................
FD556451       --> ..................................................
EW722360       --> ..................................................
FD571375       --> CTTTTATCAACTGAGATATTCACTTCTTCTTCTTACCTTATATAAGTTGT
EW722361       --> ..................................................
EX896762       --> CTTTTAgc..........................................

               1651   -   1701
UN13335        --> AGTGTCTGTAGTGGCTGGCTAGGGATGTGTATACATCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD573359       <-- .......................................
EY937009       <-- .......................................
EW727053       <-- .......................................
EW727349       <-- .......................................
EY933711       <-- .......................................
EX900642       <-- .......................................
FD556778       --> .......................................
EY941424       --> .......................................
FD989703       --> .......................................
EY937427       --> .......................................
EX889407       --> .......................................
FD556451       --> .......................................
EW722360       --> .......................................
FD571375       --> AGTGTCTGTAGTGGCTGGCTAGGGATGTGTATACATCTT
EW722361       --> .......................................
EX896762       --> .......................................