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Alignment for radish unigene UN13384

               1      -     51
UN13384        --> GGAATGATGAGAGGGAGCAGACGATTAATCAGCTCTTGACTGAGATGGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574170       <-- ..................................................
EV574415       <-- ..................................................
FD582257       <-- ..................................................
EV573346       <-- ..................................................
FD536723       <-- ..................................................
FD960743       <-- ..................................................
EY903601       <-- ..................................................
FD578055       --> GGAATGATGAGAGGGAGCAGACGATTAATCAGCTCTTGACTGAGATGGAT
FY434097       --> ...........................................GATGGAT
FD980888       --> ..................................................
EY907736       --> ..................................................
FD540166       --> ..................................................
EV547760       --> ..................................................
FD964849       --> ..................................................
EV528457       --> ..................................................
EV569685       --> ..................................................
EV570012       --> ..................................................
EV538007       --> ..................................................
EV568682       --> ..................................................
FD946974       --> ..................................................

               51     -    101
UN13384        --> GGGTTCTCTGGTAACTCTGGTGTGATTGTGTTGGCTGCTACGAATAGACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574170       <-- ..................................................
EV574415       <-- ..................................................
FD582257       <-- ..................................................
EV573346       <-- ..................................................
FD536723       <-- ..................................................
FD960743       <-- ..................................................
EY903601       <-- ..................................................
FD578055       --> GGGTTCTCTGGTAACTCTGGTGTGATTGTGTTGGCTGCTACGAATAGACC
FY434097       --> GGGTTCTCTGGTAACTCCGGTGTGATTGTGTTGGCTGCTACGAATAGACC
FD980888       --> ..................................................
EY907736       --> ..................................................
FD540166       --> ..................................................
EV547760       --> ..................................................
FD964849       --> ..................................................
EV528457       --> ..................................................
EV569685       --> ..................................................
EV570012       --> ..................................................
EV538007       --> ..................................................
EV568682       --> ..................................................
FD946974       --> ..................................................

               101    -    151
UN13384        --> TGATGTGTTGGACTCTGCGTTGTTGAGGCCTGGGAGGTTTGATAGGCAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574170       <-- ..................................................
EV574415       <-- ..................................................
FD582257       <-- ..................................................
EV573346       <-- ..................................................
FD536723       <-- ..................................................
FD960743       <-- ..................................................
EY903601       <-- ..................................................
FD578055       --> TGATGTGTTGGACTCTGCGTTGTTGAGGCCTGGGAGGTTTGATAGGCAGG
FY434097       --> TGATGTGTTGGACTCTGCGTTGTTGAGGCCTGGGAGGTTTGATAGGCAGG
FD980888       --> .......................gGAGGCCTGGGAGGTTTGATAGGCAGG
EY907736       --> ..........................................gAGGCAGG
FD540166       --> ..................................................
EV547760       --> ..................................................
FD964849       --> ..................................................
EV528457       --> ..................................................
EV569685       --> ..................................................
EV570012       --> ..................................................
EV538007       --> ..................................................
EV568682       --> ..................................................
FD946974       --> ..................................................

               151    -    201
UN13384        --> TGACGGTTGATAGGCCTGATGTTGCTGGCAGAGTCAAGATTCTTCAGGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574170       <-- ..................................................
EV574415       <-- ..................................................
FD582257       <-- ..................................................
EV573346       <-- ..................................................
FD536723       <-- ..................................................
FD960743       <-- ..................................................
EY903601       <-- ..................................................
FD578055       --> TGACGGTTGATAGGCCTGATGTTGCTGGCAGAGTCAAGATTCTTCAGGTT
FY434097       --> TGACGGTTGATAGGCCTGATGTTGCTGGCAGAGTCAAGATTCTTCAGGTT
FD980888       --> TGACGGTTGATAGGCCTGATGTTGCTGGCAGAGTCAAGATTCTTCAGGTT
EY907736       --> TGACGGTTGATAGGCCTGATGTTGCTGGGAGAGTCAAGATTCTTCAGGTT
FD540166       --> ...........gGGCCTGATGTTGCTGGGAGAGTCAAGATTCTTCAGGTT
EV547760       --> ..................................................
FD964849       --> ..................................................
EV528457       --> ..................................................
EV569685       --> ..................................................
EV570012       --> ..................................................
EV538007       --> ..................................................
EV568682       --> ..................................................
FD946974       --> ..................................................

               201    -    251
UN13384        --> CATTCTAGAGGGAAGGCGATTGGTAAAGATGTGGACTTTGATAAGGTTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574170       <-- ..................................................
EV574415       <-- ..................................................
FD582257       <-- ..................................................
EV573346       <-- ..................................................
FD536723       <-- ..................................................
FD960743       <-- ..................................................
EY903601       <-- ..................................................
FD578055       --> CATTCTAGAGGGAAGGCGATTGGTAAAGATGTGGACTTTGATAAGGTTGC
FY434097       --> CATTCTAGAGGGAAGGCGATTGGTAAAGATGTGGACTTTGATAAGGTTGC
FD980888       --> CATTCTAGAGGGAAGGCGATTGGTAAAGATGTGGACTTTAATAAGGTTGC
EY907736       --> CATTCTAGAGGGAAGGCGATTGGTAAAGATGTGGACTTTGATAAGGTTGC
FD540166       --> CATTCTAGAGGGAAGGCGATTGGTAAAGATGTGGACTTTGATAAGGTTGC
EV547760       --> ..................................................
FD964849       --> ..................................................
EV528457       --> ..................................................
EV569685       --> ..................................................
EV570012       --> ..................................................
EV538007       --> ..................................................
EV568682       --> ..................................................
FD946974       --> ..................................................

               251    -    301
UN13384        --> GAGGAGGACTCCGGGTTTCACCGGTGCTGACTTGCAGAACCTGATGAATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574170       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV574415       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD582257       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV573346       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD536723       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD960743       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY903601       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD578055       --> GAGGAGGACTCCGGGTTTCACCGGCGCTGACTTGCAGAACCTGATGAATG  Raphanus sativus cv Rat-Tail Radish #3870
FY434097       --> GAGGAGGACTCCGGGTTTCACCGGTGCTGACTTGCAGAACCTGATGAATG  Raphanus sativus cv GSK3-1
FD980888       --> GAGGAGGACTCCTGGTTTCACCGGTGCTGACTTGCAGAACCTGATGAATG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY907736       --> GAGGAGGACTCCGGGTTTCACCGGCGCTGACTTGCAGAACCTGATGAATG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD540166       --> GAGGAGGACTCCGGGTTTCACCGGCGCTGACTTGCAGAACCTGATGAATG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV547760       --> .....GGACTCCTGGTTTCACCGGTGCTGACTTGCAGAACCTGATGAATG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD964849       --> .................gCACCGGTGCTGACTTGCAGAACCTGATGAATG  Raphanus raphanistrum subsp. maritimus
EV528457       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV569685       --> ..................................................  Raphanus raphanistrum subsp. landra
EV570012       --> ..................................................  Raphanus raphanistrum subsp. landra
EV538007       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV568682       --> ..................................................  Raphanus raphanistrum subsp. landra
FD946974       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               301    -    351
UN13384        --> AAGCGGCGATTCTTGCGGCGAGGCGTGAGCTTAAGGAGATAAGCAAGGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574170       <-- ........gTTCTTGCGGCGAGGCGTGAGCTTAAGGAGATAAGCAAGGAC  Raphanus raphanistrum subsp. landra
EV574415       <-- ..........TCTTGCGGCGAGGCGTGAGCTTAAGGAGATAAGCAAGGAC  Raphanus raphanistrum subsp. landra
FD582257       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV573346       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD536723       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD960743       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY903601       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD578055       --> AAGCGGCGATTCTTGCGGCGAGGCGTGAGCTTAAGGAGATAAGCAAGGAT  Raphanus sativus cv Rat-Tail Radish #3870
FY434097       --> AAGCGGCGATTCTTGCGGCGAGGCGTGAGCTTAAGGAGATAAGCAAGGAT  Raphanus sativus cv GSK3-1
FD980888       --> AAGCCGCGATTCTTGCGGCGAGGCGTGAGCTTAAGGAGATAAGCAAGGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY907736       --> AAGCGGCGATTCTTGCGGCGAGGCGGTAGCTTAAGGAGATAAGCAAGGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD540166       --> AAGCGGCGATTCTTGCGGCGAGGCGGGAGCTTAAGGAGATAAGCAAGGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV547760       --> AAGCCGCGATTCTTGCGGCGAGGCGTGAGCTTAAGGAGATAAGCAAGGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD964849       --> AAGCGGCGATTCTTGCGGCGAGGCGGGAGCTTAAGGAGATAAGCAAGGAC  Raphanus raphanistrum subsp. maritimus
EV528457       --> ......gGATTCTTGCGGCGAGGCGGGAGCTTAAGGAGATAAGCAAGGAC  Raphanus raphanistrum subsp. maritimus
EV569685       --> ........gTTCTTGCGGCGAGGCGTGAGCTTAAGGAGATAAGCAAGGAC  Raphanus raphanistrum subsp. landra
EV570012       --> ........gTTCTTGCGGCGAGGCGTGAGCTTAAGGAGATAAGCAAGGAC  Raphanus raphanistrum subsp. landra
EV538007       --> ................................ggGGAGATAAGCAAGGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV568682       --> ..................................................  Raphanus raphanistrum subsp. landra
FD946974       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               351    -    401
UN13384        --> GAGATCTCTGATGCGCTTGAGAGGATCATTGCTGGACCTGAGAAGAAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574170       <-- GAGATCTCTGATGCGCTTGAGAGGATCATTGCTGGACCTGAGAAGAAGAA
EV574415       <-- GAGATCTCTGATGCGCTTGAGAGGATCATTGCTGGACCTGAGAAGAAGAA
FD582257       <-- ...............................................GAA
EV573346       <-- ..................................................
FD536723       <-- ..................................................
FD960743       <-- ..................................................
EY903601       <-- ..................................................
FD578055       --> GAGATCTCTGATGCGCTTGAGAAGATCATTGCTGGATCTGAGAAGAAGAA
FY434097       --> GAGATCTCTGATGCGCTTGAGAGGATCATTGCTGGACCTGAGAAGAAGAA
FD980888       --> GAGATCTCTGATGCGCTTGAGAGGATCATTGCTGGACCTGAGAAGAAGAA
EY907736       --> GAGATCTCTGATGCGCTTGA..............................
FD540166       --> GAGATCTCTGATGCGCTTGAGAGGATCATTGCTGGACCTGAGAAGAAGAA
EV547760       --> GAGATCTCTGATGCGCTTGAGAGGATCATTGCTGGACCTGAGAAGAAGAA
FD964849       --> GAGATCTCTGATGCGCTTGAGAGGATCATTGCTGGACCTGAGAAGAAGAA
EV528457       --> GAGATCTCTGATGCGCTTGAGAGGATCATTGCTGGACCTGAGAAGAAGAA
EV569685       --> GAGATCTCTGATGCGCTTGAGAGGATCATTGCTGGACCTGAGAAGAAGAA
EV570012       --> GAGATCTCTGATGCGCTTGAGAGGATCATTGCTGGACCTGAGAAGAAGAA
EV538007       --> GAGATCTCTGATGCACTTGAGAGGATCATTGCTGGACCTGAGAAGAAGAA
EV568682       --> ..................................................
FD946974       --> ..................................................

               401    -    451
UN13384        --> TGCTGTTGTCTCTGATGAGAAGAAGAGGCTTGTTGCTTACCATGAGGCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574170       <-- TGCTGTTGTCTCTGATGAGAAGAAGAGGCTTGTTGCTTACCATGAGGCTG  Raphanus raphanistrum subsp. landra
EV574415       <-- TGCTGTTGTCTCTGATGAGAAGAAGAGGCTTGTTGCTTACCATGAGGCTG  Raphanus raphanistrum subsp. landra
FD582257       <-- TGCTGTTGTCTCTGATGAGAAGAAGAGACTTGTTGCATACCATGAGGCTG  Raphanus sativus cv Rat-Tail Radish #3870
EV573346       <-- ...................gAGAAGAGGCTTGTTGCTTACCATGAGGCTG  Raphanus raphanistrum subsp. landra
FD536723       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD960743       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY903601       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD578055       --> TGCTGTTGTCTCTGATGAGAAGAAGAGACTTGTTGCATACCATGAGGCTG  Raphanus sativus cv Rat-Tail Radish #3870
FY434097       --> TGCTGTTGTCTCTGATGAGAAGAAGAGACTTGTTGCATACCATGAGGCTG  Raphanus sativus cv GSK3-1
FD980888       --> TGCTGTTGTCTCTGATGAGAAGAAGAGACTTGTTGCATACCATGAGGCTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY907736       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD540166       --> TGCTGTTGTCTCTGATGAGAAGAAGAGACTTGTTGCTTACCATGAGGCTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV547760       --> TGCTGTTGTCTCTGATGAGAAGAAGAGACTTGTTGCATACCATGAGGCTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD964849       --> TGCTGTTGTCTCTGATGAGAAGAAGAGGCTTGTTGCTTACCATGAGGCTG  Raphanus raphanistrum subsp. maritimus
EV528457       --> TGCTGTTGTCTCTGATGAGAAGAAGAGGCTTGTTGCTTACCATGAGGCTG  Raphanus raphanistrum subsp. maritimus
EV569685       --> TGCTGTTGTCTCTGATGAGAAGAAGAGGCTTGTTGCTTACCATGAGGCTG  Raphanus raphanistrum subsp. landra
EV570012       --> TGCTGTTGTCTCTGATGAGAAGAAGAGGCTTGTTGCTTACCATGAGGCTG  Raphanus raphanistrum subsp. landra
EV538007       --> TGCTGTTGTCTCTGATGAGAAGAAGAGACTTGTTGCTTACCATGAGGCTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV568682       --> ...................gAGAAGAGGCTTGTTGCTTACCATGAGGCTG  Raphanus raphanistrum subsp. landra
FD946974       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               451    -    501
UN13384        --> GTCATGCTCTAGTGGGTGCTCTTATGCCAGAGTATGATCCTGTTGCCAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574170       <-- GTCATGCTCTAGTGGGTGCTCTTATGCCAGAGTATGATCCTGTTGCCAAG
EV574415       <-- GTCATGCTCTAGTGGGTGCTCTTATGCCAGAGTATGATCCTGTTGCCAAG
FD582257       <-- GTCATGCTCTAGTGGGTGCTCTTATGCCAGAGTATGATCCTGTTGCCAAG
EV573346       <-- GTCATGCTCTAGTGGGTGCTCTTATGCCAGAGTATGATCCTGTTGCCAAG
FD536723       <-- ..............GGTGCTCTTATGCCAGAGTATGATCCTGTTGCCAAG
FD960743       <-- ..................................................
EY903601       <-- ..................................................
FD578055       --> GTCATGCTCTAGTGGGTGCTCTTATGCCAGAGTATGATCCTGTTGCCAAG
FY434097       --> GTCATGCTCTAGTGGGTGCTCTTATGCCAGAGTATGATCCTGTCGCCAAG
FD980888       --> GTCATGCTCTAGTGGGTGCTCTTATGCCAGAGTATGATCCTGTTGCCAAG
EY907736       --> ..................................................
FD540166       --> GTCATGCTCTAGTGGGTGCTCTTATGCCAGAGTATGATCCTGTTGCCAAG
EV547760       --> GTCATGCTCTAGTGGGTGCTCTTATGCCAGAGTATGATCCTGTTGCCAAG
FD964849       --> GTCATGCTCTAGTGGGTGCTCTTATGCCAGAGTATGATCCTGTTGCCAAG
EV528457       --> GTCATGCTCTAGTGGGTGCTCTTATGCCAGAGTATGATCCTGTTGCCAAG
EV569685       --> GTCATGCTCTAGTGGGTGCTCTTATGCCAGAGTATGATCCTGTTGCCAAG
EV570012       --> GTCATGCTCTAGTGGGTGCTCTTATGCCAGAGTATGATCCTGTTGCCAAG
EV538007       --> GTCATGCTCTAGTGGGTGCTCTTATGCCAGAGTATGATCCTGTTGCCAAG
EV568682       --> GTCATGCTCTAGTGGGTGCTCTTATGCCAGAGTATGATCCTGTTGCCAAG
FD946974       --> ..................................................

               501    -    551
UN13384        --> ATTTCCATCATTCCTCGTGGCCAAGCTGGTGGGCTTACCTTTTTTGCCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574170       <-- ATTTCCATCATTCCTCGTGGCCAAGCTGGTGGGCTTACCTTTTTTGCCCC  Raphanus raphanistrum subsp. landra
EV574415       <-- ATTTCCATCATTCCTCGTGGCCAAGCTGGTGGGCTTACCTTTTTTGCCCC  Raphanus raphanistrum subsp. landra
FD582257       <-- ATTTCCATCATTCCTCGTGGCCAAGCTGGTGGGCTTACCTTTTTCGCTCC  Raphanus sativus cv Rat-Tail Radish #3870
EV573346       <-- ATTTCCATCATTCCTCGTGGCCAAGCTGGTGGGCTTACCTTTTTTGCCCC  Raphanus raphanistrum subsp. landra
FD536723       <-- ATTTCAATCATTCCTCGTGGCCAAGCTGGTGGGCTTACCTTCTTTGCTCC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD960743       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY903601       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD578055       --> ATTTCCATCATTCCTCGTGGCCAAGCTGGTGGGCTTACCTTTTTCGCTCC  Raphanus sativus cv Rat-Tail Radish #3870
FY434097       --> ATTTCCATCATTCCTCGTGGCCAAGCTGGTGGGCTTACCTTTTTTGCACC  Raphanus sativus cv GSK3-1
FD980888       --> ATTTCCATCATTCCTCGTGGCCAAGCTGGTGGGCTTACCTTTTTTGCTCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY907736       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD540166       --> ATTTCAATCATTCCTCGTGGCCAAGCTGGTGGGCTTACCTTCTTTGCTCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV547760       --> ATTTCCATCATTCCTCGTGGCCAAGCTGGTGGGCTTACCTTTTTTGCTCC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD964849       --> ATTTCCATCATTCCTCGTGGCCAAGCTGGTGGGCTTACCTTTTTTGCCCC  Raphanus raphanistrum subsp. maritimus
EV528457       --> ATTTCCATCATTCCTCGTGGCCAAGCTGGTGGGCTTACCTTTTTTGCCCC  Raphanus raphanistrum subsp. maritimus
EV569685       --> ATTTCCATCATTCCTCGTGGCCAAGCTGGTGGGCTTACCTTTTTTGCCCC  Raphanus raphanistrum subsp. landra
EV570012       --> ATTTCCATCATTCCTCGTGGCCAAGCTGGTGGGCTTACCTTTTTTGCCCC  Raphanus raphanistrum subsp. landra
EV538007       --> ATTTCCATCATTCCTCGTGGCCAAGCTGGTGGGCTTACCTTTTTTGCTCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV568682       --> ATTTCCATCATTCCTCGTGGCCAAGCTGGTGGGCTTACCTTTTTTGCCCC  Raphanus raphanistrum subsp. landra
FD946974       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               551    -    601
UN13384        --> CAGTGAAGAAAGACTCGAGTCTGGATTGTACAGTAGAAGCTACCTCGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574170       <-- CAGTGAAGAAAGACTCGAGTCTGGATTGTACAGTAGAAGCTACCTCGAGA
EV574415       <-- CAGTGAAGAAAGACTCGAGTCTGGATTGTACAGTAGAAGCTACCTCGAGA
FD582257       <-- CAGTGAAGAAAGACTCGAGTCTGGATTGTACAGTAGAAGCTACCTCGAGA
EV573346       <-- CAGTGAAGAAAGACTCGAGTCTGGATTGTACAGTAGAAGCTACCTCGAGA
FD536723       <-- CAGTGAAGAAAGACTCGAGTTTGGATTGTACAGTAGAAGCTACCTCGAGA
FD960743       <-- ..................................................
EY903601       <-- ..................................................
FD578055       --> CAGTGAAGAAAGA.....................................
FY434097       --> CAGTGAAGAAAGACTAGAGTCTGGATTGTACAGTAGAAGCTACCTCGAGA
FD980888       --> CAGTGAAGAAAGACCCGAGTCTGGATTGTACAGTAGAAGCTACCTCGAGA
EY907736       --> ..................................................
FD540166       --> CAGTGAAGAAAGACTCGAGTCTGGATTGTACAGTAGAAGCTACCTCGAGA
EV547760       --> CAGTGAAGAAAGACTCGAGTCTGGATTGTACAGTAGAAGCTACCTCGAGA
FD964849       --> CAGTGAAGAAAGACTCGAGTCTGGATTGTACAGTAGAAGCTACCTCGAGA
EV528457       --> CAGTGAAGAAAGACTCGAGTCTGGATTGTACAGTAGAAGCTACCTCGAGA
EV569685       --> CAGTGAAGAAAGACTCGAGTCTGGATTGTACAGTAGAAGCTACCTCGAGA
EV570012       --> CAGTGAAGAAAGACTCGAGTCTGGATTGTACAGTAGAAGCTACCTCGAGA
EV538007       --> CAGTGAAGAAAGACTCGAGTCTGGATTGTACAGTAGAAGCTACCTCGAGA
EV568682       --> CAGTGAAGAAAGACTCGAGTCTGGATTGTACAGTAGAAGCTACCTCGAGA
FD946974       --> ..................................................

               601    -    651
UN13384        --> ATCAGATGGCTGTTGCACTTGGTGGAAGGGTTGCAGAGGAGGTGATCTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574170       <-- ATCAGATGGCTGTTGCACTTGGTGGAAGGGTTGCAGAGGAGGTGATCTTT
EV574415       <-- ATCAGATGGCTGTTGCACTTGGTGGAAGGGTTGCAGAGGAGGTGATCTTT
FD582257       <-- ATCAGATGGCTGTTGCACTTGGTGGAAGGGTTGCAGAGGAGGTGATCTTC
EV573346       <-- ATCAGATGGCTGTTGCACTTGGTGGAAGGGTTGCAGAGGAGGTGATCTTT
FD536723       <-- ATCAAATGGCTGTTGCTCTTGGTGGAAGGGTTGCAGAGGAGGTGATCTTT
FD960743       <-- ...................................GAGGAGGTGATCTTT
EY903601       <-- ..................................................
FD578055       --> ..................................................
FY434097       --> ATCAGATGGCTGTTGCACTTGGTGGAAGGGTTGCAGAGGAGGTGATCTTT
FD980888       --> ATCAGGTGGCTGTTGCACTTGGTGGAAGGGTTGCAGAGGAGGTGATCTTT
EY907736       --> ..................................................
FD540166       --> ATCAAATGGCTGTTGCTCTTGGTGGAAGGGTTGCAGAGGAGGTGATCTTT
EV547760       --> ATCAGATGGCTGTTGCACTTGGTGGAAGGGTTGCAGAGGAGGTGATCTTT
FD964849       --> ATCAGATGGCTGTTGCACTTGGTGGAAGGGTTGCAGAGGAGGTGATCTTT
EV528457       --> ATCAGATGGCTGTTGCACTTGGTGGGAGGGTTGCAGAGGAGGTGATCTTT
EV569685       --> ATCAGATGGCTGTTGCACTTGGTGGAAGGGTTGCAGAGGAGGTGATCTTT
EV570012       --> ATCAGATGGCTGTTGCACTTGGTGGAAGGGTTGCAGAGGAGGTGATCTTT
EV538007       --> ATCAGATGGCTGTTGCACTTGGTGGAAGGGTTGCAGAGGAGGTGATCTTT
EV568682       --> ATCAGATGGCTGTTGCACTTGGTGGAAGGGTTGCAGAGGAGGTGATCTTT
FD946974       --> ..................................................

               651    -    701
UN13384        --> GGGGATGACAACGTGACGACTGGAGCATCAAATGATTTCATGCAGGTGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574170       <-- GGGGATGACAACGTGACGACTGGAGCATCAAATGATTTCATGCAGGTGTC  Raphanus raphanistrum subsp. landra
EV574415       <-- GGGGATGACAACGTGACGACTGGAGCATCAAATGATTTCATGCAGGTGTC  Raphanus raphanistrum subsp. landra
FD582257       <-- GGGGATGACAACGTGACGACTGGAGCATCAAATGATTTCATGCAGGTGTC  Raphanus sativus cv Rat-Tail Radish #3870
EV573346       <-- GGGGATGACAACGTGACGACTGGAGCATCAAATGATTTCATGCAGGTGTC  Raphanus raphanistrum subsp. landra
FD536723       <-- GGAGATGACAATGTGACGACTGGAGCATCAAATGATTTCATGCAGGTGCC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD960743       <-- GGGGATGACAACGTGACGACTGGAGCATCAAATGATTTCATGCAGGTGTC  Raphanus raphanistrum subsp. maritimus
EY903601       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD578055       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FY434097       --> GGGGATGACAACGTGACGACTGGAGCATCAAATGATTTCATGCAGGTGTC  Raphanus sativus cv GSK3-1
FD980888       --> GGAGATGACAATGTGACGACTGGAGCATCAAATGATTTCATGCAGGTGTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY907736       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD540166       --> GGAGATGACAATGTGACGACTGGAGCATCAAATGATTTCATGCAG-TGCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV547760       --> GGAGATGACAATGTGACGACTGGAGCATTAAATGATTTCATGCAGGTGTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD964849       --> GGGGATGACAACGTGACGACTGGAGCATCAAATGATTTCATGCAGGTGTC  Raphanus raphanistrum subsp. maritimus
EV528457       --> GGGGATGACAACGTGACGACTGGAGCATCAAATGATTTCATGCAGGTGTC  Raphanus raphanistrum subsp. maritimus
EV569685       --> GGGGATGACAACGTGACGACTGGAGCATCAAATGATTTCATGCAGGTGTC  Raphanus raphanistrum subsp. landra
EV570012       --> GGGGATGACAACGTGACGACTGGAGCATCAAATGATTTCATGCAGGTGTC  Raphanus raphanistrum subsp. landra
EV538007       --> GGAGATGACAATGTGACGACTGGAGCATCAAATGATTTCATGCAGGTGTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV568682       --> GGGGATGACAACGTGACGACTGGAGCATCAAATGATTTCATGCAGGTGTC  Raphanus raphanistrum subsp. landra
FD946974       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               701    -    751
UN13384        --> TCGTGTGGCACGTCAAATGATCGAGAGGTTCGGGTTCAGCAAAAAGATTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574170       <-- TCGTGTGGCACGTCAAATGATCGAGAGGTTCGGGTTCAGCAAAAAGATTG
EV574415       <-- TCGTGTGGCACGTCAAATGATCGAGAGGTTCGGGTTCAGCAAAAAGATTG
FD582257       <-- TCGTGTGGCACGTCAAATGGTCGAGAGGTTCGGGTTCAGCAAAAAGATTG
EV573346       <-- TCGTGCGGCACGTCAAATGATCGAGAGGTTCGGGTTCAGCAAAAAGATTG
FD536723       <-- TCGTGTGGCACGTCAAATGATCGAGAGGTTCGGGTTCAGCAAAAAGATTG
FD960743       <-- TCGTGTGGCACGTCAAATGATCGAGAGGTTCGGGTTCAGCAAAAAGATTG
EY903601       <-- ...TGTGGCACGTCAAATGATCGAGAGGTTCGGGTTCAGCAAAAAGATTG
FD578055       --> ..................................................
FY434097       --> TCGTGTGGCACGTCAAATGATCGAGAGGTTCGGGTTCAGCAAAAAGATTG
FD980888       --> TCGTGTGGCACGTCAAATGATCGAGAGGTTCGGGTTCAGCAAAAAGATTG
EY907736       --> ..................................................
FD540166       --> TCGTGTGGCACGTCAAATGATCGAGAGGTTCGGGTTCAGCAAAAAGATTG
EV547760       --> TCGTGTGGCACGTCAAATGATCGAGAGGTTCGGGTTCAGCAAAAAGATTG
FD964849       --> TCGTGTGGCACGTCAAATGATCGAGAGGTTCGGGTTCAGCAAAAAGATTG
EV528457       --> TCGTGTGGCACGTCAAATGATCGAGAGGTTCGGGTTCAGCAAAAAGATTG
EV569685       --> TCGTGTGGCACGTCAAATGATCGAGAGGTTCGGGTTCAGCAAAAAGATTG
EV570012       --> TCGTGTGGCACGTCAAATGATCGAGAGGTTCGGGTTCAGCAAAAAGATTG
EV538007       --> TCGTGTGGCACGTCAAATGATCGAGAGGTTCGGGTTCAGCAAAAAGATTG
EV568682       --> TCGTGCGGCACGTCAAATGATCGAGAGGTTCGGGTTCAGCAAAAAGATTG
FD946974       --> ..................................................

               751    -    801
UN13384        --> GACAAGTAGCCGTTGGTGGCCCTGGTGGAAATCCCTTCATGGGTCAACAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574170       <-- GACAAGTAGCCGTTGGTGGCCCTGGTGGAAATCCCTTCATGGGTCAACAA
EV574415       <-- GACAAGTAGCCGTTGGTGGCCCTGGTGGAAATCCCTTCATGGGTCAACAA
FD582257       <-- GACAAGTAGCCGTTGGTGGCCCTGGTGGAAATCCCTTCATGGGTCAACAA
EV573346       <-- GACAAGTAGCCGTTTGTGGCCCTGGTGGAAATCCCTTCATGGGTCAACAA
FD536723       <-- GACAAGTAGCCGTTGGTGGCCCTGGTGGAAATCCCTTCATGGGTCAACAA
FD960743       <-- GACAAGTAGCCGTTGGTGGCCCTGGTGGAAATCCCTTCATGGGTCAACAA
EY903601       <-- GACAAGTAGCCGTTGGTGGCCCTGGTGGAAATCCCTTCATGGGTCAACAA
FD578055       --> ..................................................
FY434097       --> GACAAGTAGCCGTTGGTGGCCCTGGTGGAAATCCCTTCATGGGTCAACAA
FD980888       --> GACAAGTAGCCGTTGGTGGCCCTGGTGGAAATCCCTTCATGGGTCAACAA
EY907736       --> ..................................................
FD540166       --> GACAAGTAGCCGTTGGTGGCCCTGGTGGAAATCCCTTCATGGGTCAACAA
EV547760       --> GACAAGTAGCCGTTGGTGGCCCTGGTGGAAATCCCTTCATGGGTCAACAA
FD964849       --> GACAAGTAGCCGTTGGTGGCCCTGGTGGAAATCCCTTCA...........
EV528457       --> GACAAGTAGCCGTTGGTGGCCCTGGTGGAAATCCCTTCATGGGTCAACAA
EV569685       --> GACAAGTAGCCGTTGGTGGCCCTGGTGGAAATCCCTTCATGGGTCAACAA
EV570012       --> GACAAGTAGCCGTTGGTGGCCCTGGTGGAAATCCCTTCATGGGTCAACAA
EV538007       --> GACAAGTAGCCGTTGGTGGCCCTGGTGGAAATCCCTTCATGGGTCAACAA
EV568682       --> GACAAGTAGCCGTTTGTGGCCCTGGTGGAAATCCCTTCATGGGTCAACAA
FD946974       --> ..................................................

               801    -    851
UN13384        --> ATGTCTTCACAGAAAGATTACTCAATGGCAACTGCTGATATCGTAGATGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574170       <-- ATGTCTTCACAGAAAGATTACTCAATGGCAACTGCTGATATCGTAGATGC
EV574415       <-- ATGTCTTCACAGAAAGATTACTCAATGGCAACTGCTGATATCGTAGATGC
FD582257       <-- ATGTCTTCACAGAAAGATTACTCAATGGCAACTGCTGATATAGTAGATGC
EV573346       <-- ATGTCTTCACAGAAAGATTACTCAATGGCAACTGCTGATATCGTAGATGC
FD536723       <-- ATGTCTTCACAGAAAGATTACTCAATGGCAACTGCTGATATCGTAGATGC
FD960743       <-- ATGTCTTCACAGAAAGATTACTCAATGGCAACTGCTGATATCGTAGATGC
EY903601       <-- ATGTCTTCACAGAAAGATTACTCAATGGCAACTGCTGATATCGTAGATGC
FD578055       --> ..................................................
FY434097       --> ATGTCTTCACAGAAAGATTACTCAATGGCAACTGCTGATATCG.......
FD980888       --> ATGTCTTCACAGAAAGATTACTCAATGGCAACTGCTGATATCGTAGATGC
EY907736       --> ..................................................
FD540166       --> ATGTCTTCACAGAA-GATTACTCAATGGCA-CTGCTGATATCGTAGATGC
EV547760       --> ATGTCTTCACAGAAAGATTACTCAATGGCAACTGCTGATATCGTAGATGC
FD964849       --> ..................................................
EV528457       --> ATGTCTTCACAGAAAGATTACTCAATGGCAACTGCTGATATCGTAGATGC
EV569685       --> ATGTCTTCACAGAAAGATTACTCAATGGCAACTGCTGATATCGTAGATGC
EV570012       --> ATGTCTTCACAGAAAGATTACTCAATGGCAACTGCTGATATCGTAGATGC
EV538007       --> ATGTCTTCACAGAAAGATTACTCAATGGCAACTGCTGATATCGTAGATGC
EV568682       --> ATGTCTTCACAGAAAGATTACTCAATGGCAACTGCTGATATCGTAGATGC
FD946974       --> ......ggACAGAAAGATTACTCAATGGCAACTGCTGATATAGTAGATGC

               851    -    901
UN13384        --> TGAGGTGAGAGAGCTGGTGGAGAAGGCGTACAAGAGAGCCACAGACATCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574170       <-- TGAGGTGAGAGAGCTGGTGGAGAAGGCGTACAAGAGAGCCACAGACATCA
EV574415       <-- TGAGGTGAGAGAGCTGGTGGAGAAGGCGTACAAGAGAGCCACAGACATCA
FD582257       <-- TGAGGTGAGAGAGCTGGTGGAGAAGGCGTACAAGAGAGCCACAGACATCA
EV573346       <-- TGAGGTGAGAGAGCTGGTGGAGAAGGCGTACAAGAGAGCCACAGACATCA
FD536723       <-- TGAGGTGAGAGAGCTGGTGGAGAAGGCGTACAAGAGAGCCACAGACATCA
FD960743       <-- TGAGGTGAGAGAGCTGGTGGAGAAGGCGTACAAGAGAGCCACAGACATCA
EY903601       <-- TGAGGTGAGAGAGCTGGTGGAGAAGGCGTACAAGAGAGCCACAGACATCA
FD578055       --> ..................................................
FY434097       --> ..................................................
FD980888       --> TGAG-TGAGAGAGCTGGTGGAGAATGCGTA....................
EY907736       --> ..................................................
FD540166       --> TGAG-TGAGAGAGCTGGTG...............................
EV547760       --> TGAGGTGAGAGAGCTGGTGGAGAAGGCGTACAAGAGAGCCACGGACATCA
FD964849       --> ..................................................
EV528457       --> TGAGGTGAGAGAGCTGGTGGAGAAGGCGTACAAGAGAGCCACAGACATCA
EV569685       --> TGAGGTGAGAGAGCTGGTGGAGAAGGCGTACAAGAGAGCCACAGACATCA
EV570012       --> TGAGGTGAGAGAGCTGGTGGAGAAGGCGTACAAGAGAGCCACAGACATCA
EV538007       --> TGAGGTGAGAGAGCTGGTGGAGAAGGCGTACAAGAGAGCCACAGACATCA
EV568682       --> TGAGGTGAGAGAGCTGGTGGAGAAGGCGTACAAGAGAGCCACAGACATCA
FD946974       --> TGAGGTGAGAGAGCTGGTGGAGAAGGCGTACAAGAGAGCCACAGACATCA

               901    -    951
UN13384        --> TAACAACTCACATTGATATCTTGCACAAGCTTGCGCAGCTCTTGATCGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574170       <-- TAACAACTCACATTGATATCTTGCACAAGCTTGCGCAGCTCTTGATCGAG
EV574415       <-- TAACAACTCACATTGATATCTTGCACAAGCTTGCGCAGCTCTTGATCGAG
FD582257       <-- TAACAACTCACATTGATATCTTGCACAAGCTTGCGCAGCTCTTGATCGAG
EV573346       <-- TAACAACTCACATTGATATCTTGCACAAGCTTGCGCGGCTCTTGATCGAG
FD536723       <-- TAACAACTCACATTGATATCTTGCACAAGCTTGCGCAGCTTTTGATCGAG
FD960743       <-- TAACAACTCACATTGATATCTTGCACAAGCTTGCGCAGCTCTTGATCGAG
EY903601       <-- TAACAACTCACATTGATATCTTGCACAAGCTTGCGCAGCTCTTGATCGAG
FD578055       --> ..................................................
FY434097       --> ..................................................
FD980888       --> ..................................................
EY907736       --> ..................................................
FD540166       --> ..................................................
EV547760       --> TAACAACTCACATTGATATCTTGCACAAGCTTGCGCAGCTCTTGAT....
FD964849       --> ..................................................
EV528457       --> TAACAACTCACATTGATATCTTGCACAAGCTTGCGCAGCTCTTGATCGAG
EV569685       --> TAACAACTCACATTGATATCTTGCACAAGCTTGCGCAGCTCTTGATCGAG
EV570012       --> TAACAACTCACATTGATATCTTGCACAAGCTTGCGCAGCTCTTGATCGAG
EV538007       --> TAACAACTCACATTGATATCTTGCACAAGCTTGCGCAGCTCTTGATCGAG
EV568682       --> TAACAACTCACATTGATATCTTGCACAAGCTTGCGCGGCTCTTGATCGAG
FD946974       --> TAACAACTCACATTGATATCTTGCACAAGCTTGCGCAGCTCTTGATCGAG

               951    -   1001
UN13384        --> AAAGAAACTGTTGATGG-AGAAGAGTTCATGAGTCTCTTTATTGACGGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574170       <-- AAAGAAACTGTTGATGG-AGAAGAGTTCATGAGTCTCTTTATTGACGGCC
EV574415       <-- AAAGAAACTGTTGATGG-AGAAGAGTTCATGAGTCTCTTTATTGACGGCC
FD582257       <-- AAAGAAACTGTTGATGG-AGAAGAGTTCATGAGTCTCTTTATTGACGGCC
EV573346       <-- AAAGAAACTGTTGATGG-AGTAGAGTTCATGAGTCTCTTTATTGACGGCC
FD536723       <-- AAAGAAACTGTTGATGG-AGAAGAGTTCATGAGTCTCTTTATTGACAGCC
FD960743       <-- AAAGAAACTGTTGATGG-AGAAGAGTTCATGAGTCTCTTTATTGACGGCC
EY903601       <-- AAAGAAACTGTTGATGG-AGAAGAGTTCATGAGTCTCTTTATTGACGGCC
FD578055       --> ..................................................
FY434097       --> ..................................................
FD980888       --> ..................................................
EY907736       --> ..................................................
FD540166       --> ..................................................
EV547760       --> ..................................................
FD964849       --> ..................................................
EV528457       --> AAAGAAACTGTTGTTGG-AGAAGAGTTCATGAGTCTCTTTATTGACGGCC
EV569685       --> AAAGAAACTGTTGATGG-AGAAGAGTTCATGAGTCTCTTTATTGACGGCC
EV570012       --> AAAGAAACTGTTGATGG-AGAAGAGTTCATGAGTCTCTTTATTGACGGCC
EV538007       --> AAAGAAACTGTTGATGGGAGAAGAGTTCATGAGTCTCTTTATTGACGGCC
EV568682       --> AAAGAAACTGTTGATGG-AGTAGAGTTCATGAGTCTCTTTATTGACGGCC
FD946974       --> AAGGAAACTGTTGATGG-AGAAGAGTTCATGAGTCTCTTTATTGACGGCC

               1001   -   1051
UN13384        --> AAGCTGAGTTGTATGTTTCTTAGTTTATATCAAAATATTCCAAAGTTGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574170       <-- AAGCTGAGTTGTATGTTTCTTAGTTTATATCAAAATATTCCAAAGTTGAC  Raphanus raphanistrum subsp. landra
EV574415       <-- AAGCTGAGTTGTATGTTTCTTAGTTTATATCAAAATATTCCAAAGTTGAC  Raphanus raphanistrum subsp. landra
FD582257       <-- AAGCTGAGTTGTATGTTTCTTAGATTTTATCAAAATATTCCAAAGTTGAC  Raphanus sativus cv Rat-Tail Radish #3870
EV573346       <-- AAGCTGAGTTGTATGTTTCTTAGTTTATATCAAAATATTCCAAAGTTGAC  Raphanus raphanistrum subsp. landra
FD536723       <-- AAGCTGAGTTGTATGTTTTTTAGATTTTATCAATATATTCCAAAGTTGAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD960743       <-- AAGCTGAGTTGTATGTTTCTTAGTTTATATCAAAATATTCCAAAGTTGAC  Raphanus raphanistrum subsp. maritimus
EY903601       <-- AAGCTGAGTTGTATGTTTCTTAGATTTTATCAATATATTCCAAAGTTGAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD578055       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FY434097       --> ..................................................  Raphanus sativus cv GSK3-1
FD980888       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY907736       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD540166       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV547760       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD964849       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV528457       --> AAGCTGAGTTGTATGTTTCTTAGTTCATATCAAA-TATTCCAAAGTTGAC  Raphanus raphanistrum subsp. maritimus
EV569685       --> AAGCTGAGTTGTATGTTTCTTAGTTTATATCAAAATATTCCAAAGTTGAC  Raphanus raphanistrum subsp. landra
EV570012       --> AAGCTGAGTTGTATGTTTCTTAGTTTATATCAAAATATTCCAAAGTTGAC  Raphanus raphanistrum subsp. landra
EV538007       --> AAGCTGAGTTATATGTTTCTTAGATTTTATCAAAATATTCCAAAGTTGAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV568682       --> AAGCTGAGTTGTATGTTTCTTAGTTTATATCAAAATATTCCAAAGTTGAC  Raphanus raphanistrum subsp. landra
FD946974       --> AAGCTGAGTTGTATGTTTCTTAGATTTTATCAAAATATTCCAAAGTTGAC  Raphanus sativus cv Early Scarlet Globe

               1051   -   1101
UN13384        --> ATTTGCTTTTTAAATACCATTAGCTGTTAATGTATACTACTAGACC-ATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574170       <-- ATTTGCTTTTTAAATACCATTAGCTGTTAATGTATACTACTAGACC-ATT
EV574415       <-- ATTTGCTTTTTAAATACCATTAGCTGTTAATGTATACTACTAGACC-ATT
FD582257       <-- ATTTGCTTTT-AAATACCATTAGCTGTTAATGTA-A-TACTAGACCCATT
EV573346       <-- ATTTGCTTTTTAAATACCATTAGCTGTTAATGTATACTACTAGACC-ATT
FD536723       <-- ATTTGCTTTTTAAATACCATTAGCTGTTAATGTATACTACTAGACC-ATT
FD960743       <-- ATTTGCTTTTTAAATACCATTAGCTGTTAATGTATACTACTAGACC-ATT
EY903601       <-- ATTTGCTTTTTAAATACCATTAGCTGTTAATGTATACTACTAGACC-ATT
FD578055       --> ..................................................
FY434097       --> ..................................................
FD980888       --> ..................................................
EY907736       --> ..................................................
FD540166       --> ..................................................
EV547760       --> ..................................................
FD964849       --> ..................................................
EV528457       --> ATTTGCTTTTTAAATACCATTAGCTGTTAATGTATACTACTAGAC--ATT
EV569685       --> ATTTGCTTTTTAAATACCATTAGCTGTTAATGTATACTACTAGACC-ATT
EV570012       --> ATTTGCTTTTTAAATACCATTAGCTGTTAATGTATACTACTAGACC-ATT
EV538007       --> ATTTGCTTTTTAAATACCATTAGCTGTTAATGTATACTA---GACC-ATT
EV568682       --> ATTTGCTTTTTAAATACCATTAGCTGTTAATGTATACTACTAGACC-ATT
FD946974       --> ATTTGCTTTT-AAATACCATTAGCTGTTAATGTATACTAG-AC-CC-ATT

               1101   -   1151
UN13384        --> ACCCATTTGCGTATATATTTTCTTTTGTAAAATACTCTGTTTCTACTTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574170       <-- ACCCATTTGCGTATATATTTTCTTTTGTAAAATACTCTGTTTC.......
EV574415       <-- ACCCATTTGCGTATATATTTTCTTTTGTAAAATACTCTGTTTC.......
FD582257       <-- ACCCATTTGCGTATATATTTTCTTTTGT......................
EV573346       <-- ACCCATTTGCGTATATATTTTCTTTTGTAAAATACTCTGTTTCTACTTGG
FD536723       <-- ACCCATTTGCGTATATATTTTCTTTTGT......................
FD960743       <-- ACCCATTTGCGTATATA.................................
EY903601       <-- ACCCATTTGCGTATATATTTTCTTTTGc......................
FD578055       --> ..................................................
FY434097       --> ..................................................
FD980888       --> ..................................................
EY907736       --> ..................................................
FD540166       --> ..................................................
EV547760       --> ..................................................
FD964849       --> ..................................................
EV528457       --> ACCCATTTGCGTATATATTT..............................
EV569685       --> ACCCATTTGCGTATATATTTT.............................
EV570012       --> ACCCATTTGCGTATATATTTTCTTT-GTAAAATACTCTGTTTC.......
EV538007       --> --------GCGTATATATCTTCTTTTGTAAAATACTCTGTTTCc......
EV568682       --> ACCCATTTGCGTATATATTTTCTTTTGTAAAATACTCTGTTTCTACTTGG
FD946974       --> ACCCATTTGCGTATATATTTTCTTTTGTAAAATACTCTGTTTCTACTTGG

               1151   -   1201
UN13384        --> ACTGAATCCTTATGAACCATCATACTTAGTAAGGTAGAGAAAGGCAGTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574170       <-- ..................................................
EV574415       <-- ..................................................
FD582257       <-- ..................................................
EV573346       <-- ACTGAATCCTTATGAACCATCATACTTAGTAAGGTAGAGAAAGGCAGTAT
FD536723       <-- ..................................................
FD960743       <-- ..................................................
EY903601       <-- ..................................................
FD578055       --> ..................................................
FY434097       --> ..................................................
FD980888       --> ..................................................
EY907736       --> ..................................................
FD540166       --> ..................................................
EV547760       --> ..................................................
FD964849       --> ..................................................
EV528457       --> ..................................................
EV569685       --> ..................................................
EV570012       --> ..................................................
EV538007       --> ..................................................
EV568682       --> ACTGAATCCTTATGAACCATCATACTTAG.....................
FD946974       --> A-TGAATCCTTATGAACCATCAT...........................

               1201   -   1251
UN13384        --> CTTAACAACTTACAAACTGTTATACAAATGAGTTGTGTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574170       <-- ........................................
EV574415       <-- ........................................
FD582257       <-- ........................................
EV573346       <-- CTTAACAACTTACAAACTGTTATACAAATGAGTTGTGTCC
FD536723       <-- ........................................
FD960743       <-- ........................................
EY903601       <-- ........................................
FD578055       --> ........................................
FY434097       --> ........................................
FD980888       --> ........................................
EY907736       --> ........................................
FD540166       --> ........................................
EV547760       --> ........................................
FD964849       --> ........................................
EV528457       --> ........................................
EV569685       --> ........................................
EV570012       --> ........................................
EV538007       --> ........................................
EV568682       --> ........................................
FD946974       --> ........................................