Library    |     Search    |     Batch query    |     SNP    |     SSR  

Alignment for radish unigene UN13391

               1      -     51
UN13391        --> GGAGAAAGAGATATACAGATTCTCTTCCTCCAAGCCACTCAAAGCCTTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX758748       <-- ..................................................
FD575171       <-- ..................................................
FD975106       <-- ..................................................
EW719137       <-- ..................................................
FD582220       <-- ..................................................
FD978954       --> GGAGAAAGAGATATACAGATTCTCTTCCTCCAAGCCACTCAAAGCCTTAG
EW714944       --> ..................................................
EY950244       --> ..................................................
EY933133       --> ..................................................
FD578015       --> ..................................................
EW716880       --> ..................................................
EX754412       --> ..................................................

               51     -    101
UN13391        --> ATATATCATATTTTACCATATATTATTGTTAGCCTTACGTATGGATTCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX758748       <-- ..................................................
FD575171       <-- ..................................................
FD975106       <-- ..................................................
EW719137       <-- ..................................................
FD582220       <-- ..................................................
FD978954       --> ATATATCATATTTTACCATATATTATTGTTAGCCTTACGTATGGATTCTC
EW714944       --> ..................................................
EY950244       --> ..................................................
EY933133       --> ..................................................
FD578015       --> ..................................................
EW716880       --> ..................................................
EX754412       --> ..................................................

               101    -    151
UN13391        --> ATCAAACATTAATATCCGCTACGGCGGCAAGCCTGTGTTTTCTATTATGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX758748       <-- ..................................................
FD575171       <-- ..................................................
FD975106       <-- ..................................................
EW719137       <-- ..................................................
FD582220       <-- ..................................................
FD978954       --> ATCAAACATTAATATCCGCTACGGCGGCAAGCCTGTGTTTTCTATTATGT
EW714944       --> ..................................................
EY950244       --> ..................................................
EY933133       --> ..................................................
FD578015       --> ..................................................
EW716880       --> ..................................................
EX754412       --> ..................................................

               151    -    201
UN13391        --> ATCTGCATGACGAACGGTGAGCTTCACAGATTCATTGAGCCGACGAAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX758748       <-- ..................................................
FD575171       <-- ..................................................
FD975106       <-- ..................................................
EW719137       <-- ..................................................
FD582220       <-- ..................................................
FD978954       --> ATCTGCATGACGAACGGTGAGCTTCACAGATTCATTGAGCCGACGAAGAG
EW714944       --> ................................................gG
EY950244       --> ..................................................
EY933133       --> ..................................................
FD578015       --> ..................................................
EW716880       --> ..................................................
EX754412       --> ..................................................

               201    -    251
UN13391        --> CGACGGTTCCGTTAGCTTTATAACCATCGGCGATTGGGGTCGCCGTGGCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX758748       <-- ..................................................
FD575171       <-- ..................................................
FD975106       <-- ..................................................
EW719137       <-- ..................................................
FD582220       <-- ..................................................
FD978954       --> CGACGGTTCCGTTAGCTTTATAACCATCGGTGATTGGGGTCGCCGTGGCG
EW714944       --> CGACGGTTCCGTTAGCTTTATAACCATCGGCGTTTGGGGTCGCCGTGGCG
EY950244       --> ..................gATAACCATCGGCGATTGGGGTCGCCGTGGCG
EY933133       --> ..................................................
FD578015       --> ..................................................
EW716880       --> ..................................................
EX754412       --> ..................................................

               251    -    301
UN13391        --> ACTACAACCAGTCTGTTGTGGCCTACCAGATGGGAAGGGTTGGAGAAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX758748       <-- ..................................................
FD575171       <-- ..................................................
FD975106       <-- ..................................................
EW719137       <-- ..................................................
FD582220       <-- ..................................................
FD978954       --> ACTACAACCAGTCTGTTGTGGCCTACCAGATGGGAAGGGTTGGAGAAAAG
EW714944       --> ACTACAACCAGTCTGTTGTGGCCTACCAGATGGGAAGGGTTGGAGAAAAG
EY950244       --> ACTACAACCAGTCTGTTGTGGCCTACCAGATGGGAAGGGTTGGAGAAAAG
EY933133       --> ..................................................
FD578015       --> ..................................................
EW716880       --> ..................................................
EX754412       --> ..................................................

               301    -    351
UN13391        --> ATAGGGTTAGATTTCGTGGTGTCCACGGGAGATAACTTCTACGACAATGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX758748       <-- ..................................................
FD575171       <-- ..................................................
FD975106       <-- ..................................................
EW719137       <-- ..................................................
FD582220       <-- ..................................................
FD978954       --> ATAGGGTTAGATTTCGTGGTGTCCACGGGAGATAAC-CCTACGACAATGG
EW714944       --> ATAGGGTTAGATTTCGTGGTGTCCACGGGAGATAACTTCTACGACAATGG
EY950244       --> ATAGGATTAGATTTCGTGGTGTCCACGGGAGATAACTTCTACGACAATGG
EY933133       --> ................................gAACTTCTACGACAATGG
FD578015       --> ..................................................
EW716880       --> ..................................................
EX754412       --> ..................................................

               351    -    401
UN13391        --> ATTGTTTAGCGAACACGATCCTAACTTCAAAGAGTCTTTCTCTAACATCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX758748       <-- ..................................................
FD575171       <-- ..................................................
FD975106       <-- ..................................................
EW719137       <-- ..................................................
FD582220       <-- ..................................................
FD978954       --> ATTGTTTAGTGAACACGATCCTAACTTCAAAGAGTCTTTCTCTAACATCT
EW714944       --> ATTGTTTAGCGAACACGATCCTAACTTCAAAGAGTCTTTCTCTAACATCT
EY950244       --> ATTGTTTAGCGAACACGATCCTAACTTCAAAGAGTCTTTCTCTAACATCT
EY933133       --> ATTGTTTAGCGAACACGATCCTAACTTCAAAGAGTCTTTCTCTAACATCT
FD578015       --> .........................................gTAACATCT
EW716880       --> ..................................................
EX754412       --> ..................................................

               401    -    451
UN13391        --> ACACTGCTCCAAGTCTCCAGAAACAGTGGTACAGTGTCTTAGGGAACCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX758748       <-- ..................................................
FD575171       <-- ..................................................
FD975106       <-- ..................................................
EW719137       <-- ..................................................
FD582220       <-- ..................................................
FD978954       --> ACACTGCTCCAAGTCTCCAGAAACAGTGGTACAGTGTATTAGGGAACCAT
EW714944       --> ACACTGCTCCAAGTCTCCAGAAACAGTGGTACAGTGTCTTAGGGAACCAT
EY950244       --> ACACTGCTCCAAGTCTCCAGAAACAGTGGTACAGTGTCTTAGGGAACCAT
EY933133       --> ACACTGCTCCAAGTCTCCAGAAACAGTGGTACAGTGTCTTAGGGAACCAT
FD578015       --> ACACTGCTCCAAGTCTCCAGAAACAGTGGTACAGTGTCTTAGGGAACCAT
EW716880       --> .................................................g
EX754412       --> ..................................................

               451    -    501
UN13391        --> GACTACAGAGGTGACGCAGAAGCTCAGCTAAGCTCTGTCCTCAGAGAAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX758748       <-- ..................................................
FD575171       <-- ..................................................
FD975106       <-- ..................................................
EW719137       <-- ..................................................
FD582220       <-- ..................................................
FD978954       --> GACTACAGAGGTGACGCAGAAGCTCAGCTAAGCTCTGTCCTCAGAGAAAT
EW714944       --> GACTACAGAGGTGACGCAGAAGCTCAGCTAAGCTCTGTCCTCAGAGAAAT
EY950244       --> GACTACAGAGGTGACGCAGAAGCTCAGCTAAGCTCTGTCCTCAGAGAAAT
EY933133       --> GACTACAGAGGTGACGCAGAAGCTCAGCTAAGCTCTGTCCTCAGAGAAAT
FD578015       --> GACTACAGAGGTGACGCAGAAGCTCAGCTAAGCTCTGTCCTCAGAGAAAT
EW716880       --> GACTACAGAGGTGACGCAGAAGCTCAGCTAGGCTCTGTCCTCAGAGAAAT
EX754412       --> .........................................gAGAGAAAT

               501    -    551
UN13391        --> CGACAGCCGTTGGACCTGTCTCCGCTCTTTTATCGTCGACGCAGAGTTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX758748       <-- ...................CTCCGATCATTCATCGTCGACGCAGAGCTGG
FD575171       <-- ..................................................
FD975106       <-- ..................................................
EW719137       <-- ..................................................
FD582220       <-- ..................................................
FD978954       --> CGACAGTCGTTGGACCTGTCTCCGCTCCTTTATCGTCGACGCAGAGTTGG
EW714944       --> CGACAGCCGTTGGACCTGTCTCCGCTCTTTTATCGTCGACGCAGAGTTGG
EY950244       --> CGACAGCCGTTGGACCTGTCTCCGCTCTTTTATCGTCGACGCAGAGTTGG
EY933133       --> CGACAGCCGTTGGACCTGTCTCCGCTCTTTTATCGTCGACGCAGAGTTGG
FD578015       --> CGACAGCCGTTGGACCTGTCTCCGCTCTTTTATCGTCGACGCAGAGTTGG
EW716880       --> CGACAGCCGTTGGACCTGTCTCCGCTCTTTTATCGTCGACGCAGAGTTGG
EX754412       --> CGACAGCCGTTGGACCTGTCTCCGATCATTCATCGTCGACGCAGAGCTGG

               551    -    601
UN13391        --> TCGAGCTCTTCTTCGTTGACACGACTCCTTTCGTGAAAGAATACTACACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX758748       <-- TCGAGCTCTTCTTCGTTGACACGACTCCTTTCGTTAAAGAATACTACACG
FD575171       <-- ............................................TACACA
FD975106       <-- ..................................................
EW719137       <-- ..................................................
FD582220       <-- ..................................................
FD978954       --> TCGAGCTCTTCTTCGTTGACACCACTCCTTTTGTGAAAGAATACTACACA
EW714944       --> TCGAGCTCTTCTTCGTTGACACGACTCCTTTCGTGAAAGAATACTACACA
EY950244       --> TCGAGCTCTTCTTCGTTGACACGACTCCTTTCGTGAAAGAATACTACACA
EY933133       --> TCGAGCTCTTCTTCGTTGACACGACTCCTTTCGTGAAAGAATACTACACA
FD578015       --> TCGAGCTCTTCTTCGTTGACACGACTCCTTTCGTGAAAGAATACTACACA
EW716880       --> TCGAGCTCTTCTTCGTTGACACGACTCCTTTCGTGAAAGAATACTACACA
EX754412       --> TCGAGCTCTTCTTCGTTGACACGACTCCTTTCGTTAAAGAATACTACACG

               601    -    651
UN13391        --> GAAGAAGATGGTCACACGTACGACTGGCGTGCGGTCCCCTCTCGCAACTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX758748       <-- GAAGAAGATGGTCACACGTACGACTGGCGTGCGGTCCCTTCTCGCAACTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD575171       <-- GAAGAAGATGGTCACACGTACGATTGGCGTGCGGTCCCCTCTCGCAACTC  Raphanus sativus cv Early Scarlet Globe
FD975106       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW719137       <-- ..................................................  Raphanus sativus var. oleiformis
FD582220       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD978954       --> GAAGAAGATGGTCACACGTACGACTGGCGTGCGGTCCCTTCTCGCAACTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW714944       --> GAAGAAGATGGTCACACGTACGATTGGCGTGCGGTCCCCTCTCGCAACTC  Raphanus sativus var. oleiformis
EY950244       --> GAAGAAGATGGTCACACGTACGACTGGCGTGCGGTCCCCTCTCGCAACTC  Raphanus sativus cv Rat-Tail Radish #3870
EY933133       --> GAAGAAGATGGTCACACGTACGATTGGCGTGCGGTCCCCTCTCGCAACTC  Raphanus sativus var. oleiformis
FD578015       --> GAAGAAGATGGTCACACGTACGACTGGCGTGCGGTCCCCTCTCGCAACTC  Raphanus sativus cv Rat-Tail Radish #3870
EW716880       --> GAAGAAGATGGTCACACGTACGATTGGCGTGCGGTCCCCTCTCGCAACTC  Raphanus sativus var. oleiformis
EX754412       --> GAAGAAGATGGTCACACGTACGACTGGCGTGCGGTCCCTTCTCGCAACTC  Raphanus raphanistrum subsp. raphanistrum (MS)

               651    -    701
UN13391        --> TTATGTTAAGCATCTCCTCCGTGATGTCGAAGCTTCTTTGAAGAGATCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX758748       <-- TTACGTTAAGCATCTACTCCGTGATGTCGAAGCTTCTTTGAAGAGATCCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD575171       <-- TTATGTTAAGCATCTCCTCCGTGATGTCGAAGCTTCTTTGAAGAGATCCA  Raphanus sativus cv Early Scarlet Globe
FD975106       <-- .................................TTCTTTGAAGAGATCCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW719137       <-- ..................................................  Raphanus sativus var. oleiformis
FD582220       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD978954       --> TTATGTTAAGCATCTCCTACGTGATGTCGAAGCTTCTTTGAAGAGATCCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW714944       --> TTATGTTAAGCATCTCCTCCGTGATGTCGAAGCTTCTTTGAAGAGATCCA  Raphanus sativus var. oleiformis
EY950244       --> TTACGTTAAGCATCTCCTACGTGATGTCGAAGCTTCTTTGAAGAGATCCA  Raphanus sativus cv Rat-Tail Radish #3870
EY933133       --> TTATGTTAAGCACCTCCTCCGTGATGTCGAAGCTTCTTTGAAGAGATCCA  Raphanus sativus var. oleiformis
FD578015       --> TTACGTTAAGCATCTCCTACGTGATGTCGAAGCTTCTTTGAAGAGATCCA  Raphanus sativus cv Rat-Tail Radish #3870
EW716880       --> TTATGTTAAGCATCTCCTCCGTGATGTCGAAGCTTCTTTGAAGAGATCCA  Raphanus sativus var. oleiformis
EX754412       --> TTACGTTAAGCATCTACTCCGTGATGTCGAAGCTTCTTTGAAGAGATCCA  Raphanus raphanistrum subsp. raphanistrum (MS)

               701    -    751
UN13391        --> AAGCGACGTGGAAGATTGTGGTTGGTCATCACGCGATGAGAAGCATTGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX758748       <-- AAGCGACGTGGAAGATTGTGGTTGGTCATCACGCGATGAGAAGCATTGGT
FD575171       <-- AAGCGACGTGGAAGATTGTGGTTGGTCATCACGCGATGAGAAGCATTGGT
FD975106       <-- AAGCGACGTGGAAGATTGTGGTTGGTCATCACGCGATGAGAAGCATTGGT
EW719137       <-- ..................................................
FD582220       <-- ..................................................
FD978954       --> AAGCGACGTGGAAGATTGTGGTTGGTCATCACGCGATGAGAAGCATTGGT
EW714944       --> AAGCGACGTGGAAGATTGTGGTTGGTCATCACGCGATGAGAAGCATTGGT
EY950244       --> AAGCGACGTGGAAGATTGTGGTTGGTCATCACGCGATGAGAAGCATTGGC
EY933133       --> AAGCGACGTGGAAGATTGTGGTTGGTCATCACGCGATGAGAAGCATTGGT
FD578015       --> AAGCGACGTGGAAGATTGTGGTTGGTCATCACGCGATGAGAAGCATTGGC
EW716880       --> AAGCGACGTGGAAGATTGTGGTTGGTCATCACGCGATGAGAAGCATTGGT
EX754412       --> AAGCGACGTGGAAGATTGTGGTTGGTCATCACGCGATGAGAAGCATTGGT

               751    -    801
UN13391        --> CATCATGGAAACACTGTGGAGCTCGTTGAAGAGCTTTTGCCGATTATGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX758748       <-- CATCATGGAAACACTGTAGAGCTCGTTGAAGAGCTTTTGCCGATTATGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD575171       <-- CATCATGGAAACACTGTGGAGCTCGTTGAAGAGCTTTTGCCGATTATGAA  Raphanus sativus cv Early Scarlet Globe
FD975106       <-- CATCATGGAAACACTGTAGAGCTAGTTGAAGAGCTTTTGCCGATTATGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW719137       <-- ..................................................  Raphanus sativus var. oleiformis
FD582220       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD978954       --> CATCATGGAAACACTGTAGAGCTAGTTG......................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW714944       --> CATCATGGAAACACTGTGGAGCTCGTTGAAGAGCTTTTGCCGATTATGAA  Raphanus sativus var. oleiformis
EY950244       --> CATCATGGAAACACTGTTGAGCTAGTTGAAGAGCTTTT............  Raphanus sativus cv Rat-Tail Radish #3870
EY933133       --> CATCATGGAAACACTGTGGAGCTCGTTGAAGAGCTTTTGCCGATTATGAA  Raphanus sativus var. oleiformis
FD578015       --> CATCATGGAAACACTGTTGAGCTAGTTGAAGAGCTTTTGCCGATTATGAA  Raphanus sativus cv Rat-Tail Radish #3870
EW716880       --> CATCATGGAAACACTGTGGAGCTCGTTGAAGAGCTTTTGCCGATTATGAA  Raphanus sativus var. oleiformis
EX754412       --> CATCATGGAAACACTGTAGAGCTCGTTGAAGAGCTTTTGCCGATTATGAA  Raphanus raphanistrum subsp. raphanistrum (MS)

               801    -    851
UN13391        --> AGAGAACGGTGTTGATCTTTATATGAATGGACACGACCATTGTCTCGAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX758748       <-- AGAGAACGGTGTTGATCTTTATATGAATGGACATGACCATTGTCTCGAAC
FD575171       <-- AGAGAACGGTGTTGATCTTTATATGAATGGACACGACCATTGTCTCGAAC
FD975106       <-- AGAGAACGGTGTTGATCTTTACATGAATGGACACGACCATTGTCTCGAAC
EW719137       <-- ...............................CACGACCATTGTCTCGAAC
FD582220       <-- ...............................................AAC
FD978954       --> ..................................................
EW714944       --> GGAGAACGGTGTTGATCTTTATATGAATGGACACGACCATTGTCTCGAAC
EY950244       --> ..................................................
EY933133       --> AGAGAACGGTGTTG-TCTTTATATGA-TGGACACGACCA...........
FD578015       --> AGAGAACGGTGTTGATCTTTACATGAATGGACACGACCATTGTCTCGAAC
EW716880       --> AGAGAACGGTGTTGATCTTTATATGAATGGACACGACCATTGTCTCGAAC
EX754412       --> AGAGAACGGTGTTGATCTTTATATGAATGGACATGACCATTGTCTCGAAC

               851    -    901
UN13391        --> ATATTAGCGATGAAGATAGTCCTATT-CAGTTTTTGACGAGCGG-TGCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX758748       <-- ATATTAGCGATGAAGATAGTCCTATTTCAGTTTTTGACGAGCGG-TGCTG
FD575171       <-- ATATTAGCGATGAAGATAGTCCTATT-CAGTTTTTGACGAGCGG-TGCTG
FD975106       <-- ATATTAGCGATGAAGATAGTCCTATT-CAGTTTTTGACGAGCGG-TGCTG
EW719137       <-- ATATTAGCGATGAAGATAGTCCTATT-CAGTTTTTGACGAGCGG-TGCTG
FD582220       <-- ATATTAGCGATGAAGATAGTCCTATT-CAGTTTTTGACGAGCGG-TGCTG
FD978954       --> ..................................................
EW714944       --> ATATTAGCGATGAAGATAGTCCTATT-CAGTTTTTGACGAGCGGGTGCTG
EY950244       --> ..................................................
EY933133       --> ..................................................
FD578015       --> ATATTAGCGATGAAGATAGTCCTATT-CAGTTTTTGACGAGCGG-TGCTG
EW716880       --> ATATTAGCGATGAAGATAGTCCTATT-CAGTTTTTGACGAGCGG-TGCTG
EX754412       --> ATATTAGCGATGAAGATAGTCCTATTTCAGTTTTTGACGAGCGG-TGCTG

               901    -    951
UN13391        --> GTTCCAAGGCTTGGAGAGGTGATGTTGACCCGACCACTAACAATCCTAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX758748       <-- GTTCCAAGGCTTGGAGAGGTGATGTTGACCCGACCACCAACAATCCTAAG
FD575171       <-- GTTCCAAGGCTTGGAGAGGTGATGTTGACCCGACCACTAACAATCCTAAG
FD975106       <-- GCTCCAAGGCTTGGAGAGGTGATGTTGACCCGACCACTAACAATCCTAAG
EW719137       <-- GTTCCAAGGCTTGGAGAGGTGATGTTTACCCGACCACTAACAATCCTAAG
FD582220       <-- GTTCCAAGGCTTGGAGAGGTGATGTTGACCCGACCACTAACAATCCTAAG
FD978954       --> ..................................................
EW714944       --> GTTCCAAG-CTTGGAGAGGTGATGTTTACCCGACCACTAACAATCCTAAG
EY950244       --> ..................................................
EY933133       --> ..................................................
FD578015       --> GTTCCAAGGCTTGGAGAGGTGATGTTGACCCGACCACTAACAATCCTAAG
EW716880       --> GTTCCAAGGCTTGGAGAGGTGATGTTGACCCGACCACTAACAATCCTAAG
EX754412       --> GTTCCAAGGCTTGGAGAGGTGATGTTGACCCGACCACCAACAATCCTAAG

               951    -   1001
UN13391        --> TCTGTGAGATTTTATTATGATGGTCAAGGGTTCATGTCTGCTAGATTCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX758748       <-- TCTGTGAGGTTTTATTATTATGGTCAAGGGTTCATGTCTGCTAGATTCAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD575171       <-- TCTGTGAGATTTTATTATGACGGTCAAGGGTTCATGTCTGCTAGATTCAC  Raphanus sativus cv Early Scarlet Globe
FD975106       <-- TCTGTGAGGTTTTATTATGATGGTCAAGGGTTCATGTCTGCTAGATTCAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW719137       <-- TCTGTGAGATTTTATTATGACGGTCAAGGGTTCATGTCTGCTAGATTCAC  Raphanus sativus var. oleiformis
FD582220       <-- TCTGTGAGATTTTATTATGATGGTCAAGGGTTCATGTTTGCTAGATTCAC  Raphanus sativus cv Rat-Tail Radish #3870
FD978954       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW714944       --> TCTGTGAGATTTTATTATGACGGTCAAGGGTTCATGTCTGCTAGATTCAC  Raphanus sativus var. oleiformis
EY950244       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY933133       --> ..................................................  Raphanus sativus var. oleiformis
FD578015       --> TCTGTGAGATTTTATTATGATGGTCAAGGGTTCATGTCTGCTAGATTCAC  Raphanus sativus cv Rat-Tail Radish #3870
EW716880       --> TCTGTGAGATTTTATTATGACGGTCAAGGGTTCATGTCTGCTAGATTCAC  Raphanus sativus var. oleiformis
EX754412       --> TCTGTGAGGTTTTATTATTATGGTCAAGGGTTCATGTCTGCTAGATTCAC  Raphanus raphanistrum subsp. raphanistrum (MS)

               1001   -   1051
UN13391        --> TCACTCAGATGCAGAGATAGTCTTCTACAATGTGTTTGGTGAGGTTTTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX758748       <-- TCACTCAGATGCAGAGATAGTCTTCTACAATGTGTTTGGTGAGGTTTTGC
FD575171       <-- TCACTCAGATGCAGAGATAGTCTTCTACAATGTGTTTGGTGAGGTTTTGC
FD975106       <-- TCACTCGGATGCAGAGATAGTCTTCTACAATGTGTTTGGTGAGGTTTTGC
EW719137       <-- TCACTCAGATGCAGAGATAGTCTTCTACAATGTGTTTGGTGAGGTTTTGC
FD582220       <-- TCACTCGGATGCAGAGATAGTCTTCTACAATGTGTTTGGTGAGGTTTTGC
FD978954       --> ..................................................
EW714944       --> TCACTCAGATGCAGAGATAGTCTTCTACA-TGTGTTTG............
EY950244       --> ..................................................
EY933133       --> ..................................................
FD578015       --> TCACTCGGATGCAGAGATAGTCTTCTACAATGTGTTTGGTGAGGTTTTGC
EW716880       --> TCACTCAGATGCAGAGATAGTCTTCTACAATGTGTTTGGTGAGGTTTTGC
EX754412       --> TCACTCAGATGCAGAGATAGTCTTCTACAATGTGTTTGGTGAGGTTTTGC

               1051   -   1101
UN13391        --> ACAAGTGGGTTACTTCTAAGGAGCTTCTTCATTCCTCTGTTTGATCAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX758748       <-- ACAAGTGGGTTACTTCTAAGGAGCTTCTTCATTCCTCTGTTTGATCAGAA
FD575171       <-- ACAAGTGGGTTACTTCTAAGGAGCTTCTTCATTCCTCTGTTTGATCAGAA
FD975106       <-- ACAAGTGGGTTACTTCTAAGGAGCTTCTTCATTCCTCTGTTTGATCAGAA
EW719137       <-- ACAAGTGGGTTACTTTTAAGGAGCTTCTTCATTCCTCTGTTTGATCAGAA
FD582220       <-- ACAAGTGGGTTACTTTTAAGGAGCTTCTTCATTCCTCTGTTTGATCAGAA
FD978954       --> ..................................................
EW714944       --> ..................................................
EY950244       --> ..................................................
EY933133       --> ..................................................
FD578015       --> ACAAGTGGGTTACTT...................................
EW716880       --> ACAAGTGGGTTACTTCTAAGGAGCTTCTTCATTCCTCTGTTTGATCAGAA
EX754412       --> ACAAGTGGGTTACTTCTAAGGAGCTTCTTCATTCCTCTGTTTGATCAGAA

               1101   -   1151
UN13391        --> GTATAAATAATTTTTTGTTTCCTT-GTAATTTTTGTAACATATCTTTCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX758748       <-- GTATAAATAAATTTTTGTTTCCTTTGTAATCTTTGTAACATATCTTTCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD575171       <-- GTATAAATAATTTTTTGTTTCCTT-GTAATTTTTGTAACATATCTTTCAA  Raphanus sativus cv Early Scarlet Globe
FD975106       <-- GTATAAATAAATTTTTGTTTCCTTTGTAATTTTTGTAACATATCTTTCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW719137       <-- GTATAAATAATTTTTTGTTTCCTT-GTAATTTTTGTAACATATCTTTCAA  Raphanus sativus var. oleiformis
FD582220       <-- GTATAAATAATTTTTTGTTTCCTT-GTAATTTTTGTAACATATCTTTCAA  Raphanus sativus cv Rat-Tail Radish #3870
FD978954       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW714944       --> ..................................................  Raphanus sativus var. oleiformis
EY950244       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY933133       --> ..................................................  Raphanus sativus var. oleiformis
FD578015       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EW716880       --> GTATAAATAATTTTTTGTTTCCTT-GTAATTTTTGTAACATATCTTTCAA  Raphanus sativus var. oleiformis
EX754412       --> GTATAAATAAATTTTTGTTTCCTTTGTAATCTTTGTAACATATCTTTCAA  Raphanus raphanistrum subsp. raphanistrum (MS)

               1151   -   1201
UN13391        --> GTCCTATTGCAGGCTAGGTAGGCTTCCTGCTTAGTTTAGCATCA-TTTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX758748       <-- GTCCTATTGCAGGCTAGGTAGGCTTCCTGCTTAGTTTAGCATCA-TTTAG
FD575171       <-- GTCCTATTGCAGGCTAGGTAGGCTTCCTGCTTAGTTTAGCATCA-TTTAG
FD975106       <-- GTCCTATTGCAGGCTAGGTAGGCTTCCTGCTTAGTTTAGCATCAACTTAG
EW719137       <-- GTCCTATTGCAGGCTAGGTAGGCTTCCTGCTTAGTTTAGCATCA-TTTAG
FD582220       <-- TTCCTATTGCAGGCTAGGTAGGCTTCCTGCTTAGTTTAGCATCA-TTTAG
FD978954       --> ..................................................
EW714944       --> ..................................................
EY950244       --> ..................................................
EY933133       --> ..................................................
FD578015       --> ..................................................
EW716880       --> GTCCTATTGCAG......................................
EX754412       --> GTCCTATTGCAGGCTAG-TAGGCTTCCTGCTTAGTTTAGCATCA-TTTAG

               1201   -   1251
UN13391        --> CTATAGCTTATCCC-AATAAAA-CATTATTTAAATGTAATGTAATGATTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX758748       <-- CTATAGCTTATCCC-AATAAAA-CATTATTTAAATGTAATGTAATGATTG
FD575171       <-- CTATAGCTTATCCC-AATAAAA-CATTATTTAAATGTAATGTAATGATTG
FD975106       <-- CTATAGCTTATCCC-AATAAAAATATTATTTGAATGTAATGTAATGATTA
EW719137       <-- CTATAGCTTATCCCTAATAA..............................
FD582220       <-- CTATAGCTTATCCC-AATAAAA-CATTATTTAAATGTAATGTAATGATTG
FD978954       --> ..................................................
EW714944       --> ..................................................
EY950244       --> ..................................................
EY933133       --> ..................................................
FD578015       --> ..................................................
EW716880       --> ..................................................
EX754412       --> CTATAGCTTATCCC-Ataaaca............................

               1251   -   1301
UN13391        --> TCTTAATGATTTTCTTCTTAATGTTATTGTCTTGACTCATTTGCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX758748       <-- TCTTAATGATTATCTTCTTAATGT......................
FD575171       <-- TCTTAATGATTTTCTTCTTAATGTTATTGTCTTGACTCATTTGCAT
FD975106       <-- TCTTcttaatgttatagtcaatttgtatt.................
EW719137       <-- ..............................................
FD582220       <-- TCTTAATGATTTTCTTCTTAATGTTATTGTC...............
FD978954       --> ..............................................
EW714944       --> ..............................................
EY950244       --> ..............................................
EY933133       --> ..............................................
FD578015       --> ..............................................
EW716880       --> ..............................................
EX754412       --> ..............................................