1      -     51
UN13401        --> GTGGCAACATCTCTACTGCTTACTAAGCTTCAATATATTTGGAAACACAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY433778       <-- .................................TATATTTGGAAACACAA
FD580343       <-- ..................................................
FY442124       <-- ..................................................
EV537625       <-- ..................................................
FD577347       <-- ..................................................
FD577604       <-- ..................................................
FD972079       <-- ..................................................
FD955095       <-- ..................................................
EY931456       <-- ..................................................
EY908260       <-- ..................................................
FD581665       --> GTGGCAACATCTCTACTGCTTACTAAGCTTCAATATATTTGGAAACACAA
FD951203       --> ...............CTGCTTACTAAGCTTCAATATATTTGGAAACACAA
EY927412       --> .................GCTTACCAAGCTTCAATAT--TTGGAAACACAA
EV541822       --> ..................CTTACCAAGCTTCAATAT--TTGGAAACCCAA
EY895075       --> ..................................................
EY903983       --> ..................................................
FD968050       --> ..................................................
FD581879       --> ..................................................
EV532496       --> ..................................................

               51     -    101
UN13401        --> ACGAAATTGTAAAAGTAAAAATAAAAACTTAAAACACAAATCCATTAAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY433778       <-- ACGAAATTGTAAAAGTAAAAATAAAAACTTAAAACACAAATCCATTAAAC
FD580343       <-- ...............gtAAAATAAAA-CTTAAA-CACAA-TCCATTAAAA
FY442124       <-- ...........................CTTAAAACACAAATCCATTAAAC
EV537625       <-- ..............................................AAAC
FD577347       <-- ..................................................
FD577604       <-- ..................................................
FD972079       <-- ..................................................
FD955095       <-- ..................................................
EY931456       <-- ..................................................
EY908260       <-- ..................................................
FD581665       --> ACGAAATTGTAAAAATAAAAATAAAAACTTAAAACACAAATCCATTAAAA
FD951203       --> ACGAAATTGTAAAAGTAAAAATAAAAACTTAAAACACAAATCCATTAAAA
EY927412       --> ACGAAATTGTAAAAGTAAAAATAAAAACTTAAAACACAAATCCATTAAAC
EV541822       --> ACGAAATTGTAAAAATAATAAAAAGAACTTGAAACACAAATCCATTAAAC
EY895075       --> ......................AAAAACTTAAAACACAAATCCATTAAAA
EY903983       --> .........................AACTTAAAACACAAATCCATTAAAC
FD968050       --> .........................AACTTAAAACACAAATCCATTAAAC
FD581879       --> .........................gACTTAAAACACAAATCCATTAAAC
EV532496       --> ..................................................

               101    -    151
UN13401        --> GGGTAAAAAGAGTAGAGGTGAGTTTTAGAGGCTACACAGATAAAGGTCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY433778       <-- GGGTAAAAAGAGTAGAGGTGAGTTTTAGAGGCTACACAGATAAAGGTCAG
FD580343       <-- GGGTAAAA-GAGTAGAGGTGAGTTT-AGAGGCTACACAGATAAAGGTCAG
FY442124       <-- GGGTAAAAAGAGTAGAGGTGAGTTTTAGAGGCTACACAGATAAAGGTCAG
EV537625       <-- GGGTAAAAAGAGTAGAGGTGAGTTTTAGAGGCTACACAGACAAAGGTCAG
FD577347       <-- ..........AGTAGAGGTGAGTTTTAGAGGCTACACAGATAAAGGTCAG
FD577604       <-- ...........................GAGGCTACACAGA-AAAGGTCAG
FD972079       <-- ..................................................
FD955095       <-- ..................................................
EY931456       <-- ..................................................
EY908260       <-- ..................................................
FD581665       --> GGGTAAAAAGAGTAGAGGTGAGTTTTAGAGGCTACACAGATAAAGGTCAA
FD951203       --> GGGTAAAAAGAGTAGAGGTGAGTTTTAGAGGCTACACAGATAAAGGTCAG
EY927412       --> GGGTAAAAAGAGTAGAGGTGAGTTTTGGAGGCTACACAGGTAAAGGTCAG
EV541822       --> GGGTAAAAAGAGTAGAGGTGAGTTTTAGAGGCTACACAGACAAAGGTCAG
EY895075       --> GGGTAAAAAGAGTAGAGGTGAGTTTTAGAGGCTACACAGATAAAGGTCAG
EY903983       --> GGGTAAAAAGAGTAGAGGTGAGTTTTAGAGGCTACACAGATAAAGGTCAG
FD968050       --> GGGTAAAAAGAGTAGAGGTGAGTTTTAGAGGCTACACAGATAAAGGTCAG
FD581879       --> GGGTAAAAAGAGTAGAGGTGAGTTTTAGAGGCTACACAGATAAAGGTCAG
EV532496       --> ..................................................

               151    -    201
UN13401        --> AGAAATCAACAGACAGTTGAAACAACATCAGACACAATACTCGTTTCTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY433778       <-- AGAAATCAACAGACAGTTGAAACAACATCAGACACAATACTCGTTTCTTA
FD580343       <-- AGAA-TCAACAGACAGTTGAAACAACATCAGACACAATACTCGTTTCTTA
FY442124       <-- AGAAATCAACAGACAGTTGAAACAACATCAGACACAATACTCGTTTCTTA
EV537625       <-- AGAAATCAACAGACAGTTGAAACAACATCAGACACAATACTCGTTTCTTA
FD577347       <-- AGAAATCAACAGACAGTTGAAACAACATCAGACACAATACTCGTTTCTTA
FD577604       <-- AGAA-TCA-CAGACAGT-GAA-CA-CATCAGACACA-TACTCGTTTCTT-
FD972079       <-- ..................................................
FD955095       <-- ..................................................
EY931456       <-- ..................................................
EY908260       <-- ..................................................
FD581665       --> AAAAATCAACAGACAGTTGAAACAACATCAGACACAATACTCGTTTCTTA
FD951203       --> AGAAATCAACAGACAGTTGAAACAACATCAGACACAATACTCGTTTCTTA
EY927412       --> AAAAATCAACAGACAGTTGAAACAACATCAGACACAATACTCGTTTCTTA
EV541822       --> AGAAATCAACAGACAGTTGAAACAACATCAGACACAATACTCGTTTCTTA
EY895075       --> AGAAATCAACAGACAGTTGAAACAACATCAGACACAATACTCGTTTCTTA
EY903983       --> AGAAATCAACAGACAGTTGAAACAACATCAGACACAATACTCGTTTCTTA
FD968050       --> AGAAATCAACAGACAGTTGAAACAACATCAGACACAATACTCGTTTCTTA
FD581879       --> AAAAATCAACAGACAGTTGAAACAACATCAGACACAATACTCGTTTCTTA
EV532496       --> ..................................................

               201    -    251
UN13401        --> TTTCTCTTCTCCGCAATCACTAATG-ATCTCTTTCAAGTTGCAAAGAACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY433778       <-- TTTCTCTTCTCCGCAATCACTAATG-ATCTCTTTCAAGTTGCAA-GAACG  Raphanus sativus cv GSK3-1
FD580343       <-- TTTCTCTTCTCCGCAATCACTAATG-ATCTCTTTCAAGTTGCAAAAAACG  Raphanus sativus cv Rat-Tail Radish #3870
FY442124       <-- TTTCTCTTCTCCGCAATCACTAATG-ATCTCTTTCAAGTTGCAA-GAACG  Raphanus sativus cv GSK3-1
EV537625       <-- TTTCTCTTCTCCGCAATCACTAATGTATCTCTTTCAAGTTGCAAA-AACG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD577347       <-- TTTCTCTTCTCCGCAATCACTAATG-ATCTCTTTCAAGTTGCAAAAAACG  Raphanus sativus cv Rat-Tail Radish #3870
FD577604       <-- TTTCTCT-CTC-GCAATCACTAATG-ATCTCTTTCAAGT-GCAA-GAACG  Raphanus sativus cv Rat-Tail Radish #3870
FD972079       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD955095       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY931456       <-- ..................................................  Raphanus sativus var. oleiformis
EY908260       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD581665       --> TTTCTCTTCTCCGCAATCACTAATG-ATCTCTTTCAAGTTGCAAAAAACG  Raphanus sativus cv Rat-Tail Radish #3870
FD951203       --> TTTCTCTTCTCCGCAATCACTAATG-ATCTCTTTCAAGTTGCAAAAAACG  Raphanus sativus cv Rat-Tail Radish #3870
EY927412       --> TTTCTCTTCTCCGCAATCACTAATG-ATCTCTTTCAAGTTGCAA-GAACG  Raphanus sativus var. oleiformis
EV541822       --> TTTCTCTTCTCCGCAATCACTAATGTATCTCTTTCAAGTTGCAAA-AACG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY895075       --> TTTCTCTTCTCCGCAATCACTAATG-ATCTCTTTCAAGTTGCAAAAAACG  Raphanus raphanistrum subsp. maritimus
EY903983       --> TTTCTCTTCTCCGCAATCACTAATG-ATCTCTTTCAAGTTGCAAA-AACG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD968050       --> TTTCTCTTCTCCGCAATCACTAATG-ATCTCTTTCAAGTTGCAAA-AACG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD581879       --> TTTCTCTTCTCCGCAATCACTAATG-ATCTCTTTCAAGTTGCAA-GAACG  Raphanus sativus cv Rat-Tail Radish #3870
EV532496       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               251    -    301
UN13401        --> TGTTCCAGCAG--CTTCATCATGCCTTGTTAGCGATGTTGTTGGAGAGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY433778       <-- TGTTCCAGCAG--CTCCATCATGCCTTGTTAGCGATGTTGTTGGAGAGCC  Raphanus sativus cv GSK3-1
FD580343       <-- TGTTCCAGCAG--CTTCATCATGCCTTGTTAGCGATATTGTTGGAGAGCC  Raphanus sativus cv Rat-Tail Radish #3870
FY442124       <-- TGTTCCAGCAG--CTCCATCATGCCTTGTTAGCGATGTTGTTGGAGAGCC  Raphanus sativus cv GSK3-1
EV537625       <-- TGTTCCAGCAGAGCTCGATCATGCCTTGTTAGCGATGTTGTTGGAGAGCC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD577347       <-- TGTTCCAGCAG--CTTCATCATGCCTTGTTAGCGATATTGTTGGAGAGCC  Raphanus sativus cv Rat-Tail Radish #3870
FD577604       <-- TGTTCCAGCAA--CTCCATCATGC-TTGTTAGCGATGTTGTTGGAGAGCC  Raphanus sativus cv Rat-Tail Radish #3870
FD972079       <-- ....................................GTTGTTGGAGAGCC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD955095       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY931456       <-- ..................................................  Raphanus sativus var. oleiformis
EY908260       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD581665       --> TGTTCCAGCAG--CTTCATCATGCCTTGTTAGCGATATTGTTGGAGAGCC  Raphanus sativus cv Rat-Tail Radish #3870
FD951203       --> TGTTCCAGCAG--CTTCATCATGCCTTGTTAGCGATATTGTTGGAGAGCC  Raphanus sativus cv Rat-Tail Radish #3870
EY927412       --> TGTTCCAGCAG--CTCCATCATGCCTTGTTAGCGATGTTGTTGGAGAGCC  Raphanus sativus var. oleiformis
EV541822       --> TGTTCCAGCAGAGCTCGATCATGCCTTGTTAGCGATGTTGTTGGAGAGCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY895075       --> TGTTCCAGCAG--CTTCATCATGCCTTGTTAGCGATATTGTTGGAGAGCC  Raphanus raphanistrum subsp. maritimus
EY903983       --> TGTTCCAGCAGAGCTCGATCATGCCTTGTTAGCGATGTTGTTGGAGAGCC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD968050       --> TGTTCCAGCAGAGCTCGATCATGCCTTGTTAGCGATGTTGTTGGAGAGCC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD581879       --> TGTTCCAGCAA--CTCCATCATGCCTTGTTAGCGATGTTGTTGGAGAGCC  Raphanus sativus cv Rat-Tail Radish #3870
EV532496       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               301    -    351
UN13401        --> AATCAAGGCCTTCATAAAGACCTTCCCCAGATGTGGCACATGTGCTTTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY433778       <-- AATCAAGGCCTTCATAAAGACCTTCCCCAGATGTGGCACATGTGCTTTGA
FD580343       <-- AATCAAGGCCTTCATAAAGACCTTCCCCAGATGTGGCACATGTGCTTTGA
FY442124       <-- AATCAAGGCCTTCATAAAGACCTTCCCCAGATGTGGCACATGTGCTTTGA
EV537625       <-- AATCAAGGCCTTCATAAAGACCTTCCCCACATGTGGCACATGTGCTTTGA
FD577347       <-- AATCAAGGCCTTCATAAAGACCTTCCCCAGATGTGGCACATGTGCTTTGA
FD577604       <-- AATCAAGGCCTTCATAAAGACTTTCCCCAGATGTGGCACATGTGCTTTGA
FD972079       <-- AATCAAGGCCTTCATAAAGACCTTCCCCAGATGTGGCACATGTGCTTTGA
FD955095       <-- ..................GACCTTCCCCAGATGTGGCACATGTGCTTTGA
EY931456       <-- .......................TCCCCAGATGTGGCACATGTGCTTTGA
EY908260       <-- ........................CCCCAGATGTGGCACATGTGCTTTGA
FD581665       --> AATCAAGGCCTTCATAAAGACCTTCCCCAGATGTGGCACATGTGCTTTGA
FD951203       --> AATCAAGGCCTTCATAAAGACCTTCCCCAGATGTGGCACATGTGCTTTGA
EY927412       --> AATCAAGGCCTTCATAAAGACCTTCCCCAGATGTGGCACATGTGCTTTGA
EV541822       --> AATCAAGGCCTTCATAAAGACCTTCCCCAGATGTGGCACATGTGCTTTGA
EY895075       --> AATCAAGGCCTTCATAAAGACCTTCCCCAGATGTGGCACATGTGCTTTGA
EY903983       --> AATCAAGGCCTTCATAAAGACCTTCCCCAGATGTGGCACATGTGCTTTGA
FD968050       --> AATCAAGGCCTTCATAAAGACCTTCCCCAGATGTGGCACATGTGCTTTGA
FD581879       --> AATCAAGGCCTTCATAAAGACCTTCCCCAGATGTGGCACATGTGCTTTGA
EV532496       --> ..................................................

               351    -    401
UN13401        --> ATGTACCAGTGGCGCTGGCGAAGAGAGTGAAGGCCAAGCTTGTCGGTTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY433778       <-- ATGTACCAGTGGCGCTGGCGAAGAGAGTGAAGGCCAAGCTTGTCGGTTAT
FD580343       <-- ATGTACCAGTGGCGCTGGCGAAGAGAGTGAAGGCCAAGCTTGTCAGTTAT
FY442124       <-- ATGTACCAGTGGCGCTGGCGAAGAGAGTGAAGGCCAAGCTTGTCGGTTAT
EV537625       <-- ATGTACCAGTGGCGCTGGCGAAGAGAGTGAAGGCCAAGCTTGTCGGTTAT
FD577347       <-- ATGTACCAGTGGCGCTGGCGAAGAGAGTGAAGGCCAAGCTTGTCAGTTAT
FD577604       <-- ATGTACCAGTGGCGCTGGCGAAGAGAGTGAAGGCCAAGCTTGTCGGTTAT
FD972079       <-- ATGTACCAGTGGCGCTGGCGAAGAGAGTGAAGGCCAAGCTTGTCGGTTAT
FD955095       <-- ATGTACCAGTGGCGCTGGCGAAGAGAGTGAAGGCCAAGCTTGTCAGTTAT
EY931456       <-- ATGTACCAGTGGCGCTGGCGAAGAGAGTGAAGGCCAAGCTTGTCGGTTAT
EY908260       <-- ATGTACCAGTGGCGCTGGCGAAGAGAGTGAAGGCCAAGCTTGTCGGTTAT
FD581665       --> ATGTACCAGTGGCGCTGGCGAAAAAAGTGAAGGCCAAGCTTGTCAGTTAT
FD951203       --> ATGTACCAGTGGCGCTGGCGAAAAGAGTGAAGGCCAAGCTTGTCAGTTAT
EY927412       --> ATGTACCAGTGGCGCTGGCGAAAAGAGTGAAGGCCAAGCTTGTCGGTTAT
EV541822       --> ATGTACCAGTGGCGCTGGCGAAGAGAGTGAAGGCCAAGCTTGTCGGTTAT
EY895075       --> ATGTACCAGTGGCGCTGGCGAAGAGAGTGAAGGCCAAGCTTGTCAGTTAT
EY903983       --> ATGTACCAGTGGCGCTGGCGAAAAGAGTGAAGGCCAAGCTTGTCGGTTAT
FD968050       --> ATGTACCAGTGGCGCTGGCGAAGAGAGTGAAGGCCAAGCTTGTCGGTTAT
FD581879       --> ATGTACCAGTGGCGCTGGCGAAAAAAGTGAAGGCCAAGCTTGTCGGTTAT
EV532496       --> ..................................................

               401    -    451
UN13401        --> TTCTGCAGCATTCATTGCGTTGGGAAGATCTTGTTTGTTAGCAAACACTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY433778       <-- TTCTGCAGCATTCATTGCGTTGGGAAGATCTTGTTTGTTAGCAAACACTA  Raphanus sativus cv GSK3-1
FD580343       <-- TTCTGCAGCATTCATTGCGTTGGGAAGATCTTGTTTGTTAGCAAACACTA  Raphanus sativus cv Rat-Tail Radish #3870
FY442124       <-- TTCTGCAGCATTCATTGCGTTGGGAAGATCTTGTTTGTTAGCAAACACTA  Raphanus sativus cv GSK3-1
EV537625       <-- TTCTGCAGCATTCATTGCGTTGGGAAGATCTTGTTTGTTAGCAAACACAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD577347       <-- TTCTGCAGCATTCATTGCGTTGGGAAGATCTTGTTTGTTAGCAAACACTA  Raphanus sativus cv Rat-Tail Radish #3870
FD577604       <-- TTCTGCAGCATTCATTGCGTTGGGAAGATCTTGTTTGTTAGCAAACACTA  Raphanus sativus cv Rat-Tail Radish #3870
FD972079       <-- TTCTGCAGCATTCATTGCGTTGGGAAGATCTTGTTTGTTAGCAAACACAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD955095       <-- TTCTG---CATTCATTGCGTTGGGAAGATCTTGTTTGTTAGCAAACACTA  Raphanus sativus cv Rat-Tail Radish #3870
EY931456       <-- TTCTGCAGCATTCATTGCGTTGGGAAGATCTTGTTTGTTAGCAAACACTA  Raphanus sativus var. oleiformis
EY908260       <-- TTCTGCAGCATTCATTGCGTTGGGAAGATCTTGTTTGTTAGCAAACACAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD581665       --> TTCTGCAGCATTCATTGCGTTGGGAAGATCTTGTTTGTTAGCAAACACTA  Raphanus sativus cv Rat-Tail Radish #3870
FD951203       --> TTCTGCA---TTCATTGCGTTGGGAAGATCTTGTTTGTTAGCAAACACTA  Raphanus sativus cv Rat-Tail Radish #3870
EY927412       --> TTCTGCAGCATTCATTGCGTTGGGAAGATCTTGTTTGTTAGCAAACACTA  Raphanus sativus var. oleiformis
EV541822       --> TTCTGCAGCATTCATTGCGTTGGGAAGATCTTGTTTGTTAGCAAACACAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY895075       --> TTCTGCAGCATTCATTGCGTTGGGAAGATCTTGTTTGTTAGCAAACACTA  Raphanus raphanistrum subsp. maritimus
EY903983       --> TTCTGCAGCATTCATTGCGTTGGGAAGATCTTGTTTGTTAGCAAACACAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD968050       --> TTCTGCAGCATTCATTGCGTTGGGAAGATCTTGTTTGTTAGCAAACACAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD581879       --> TTCTGCAGCATTCATTGCGTTGGGAAGATCTTGTTTGTTAGCAAACACTA  Raphanus sativus cv Rat-Tail Radish #3870
EV532496       --> ..............................................ACTA  Raphanus raphanistrum subsp. maritimus

               451    -    501
UN13401        --> GAAGGACAGCATCCCTCAGTTCATCCTCGTTCAACATGCGATGTAACTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY433778       <-- GAAGGACAGCATCCCTCAGTTCATCCTCGTTCAACATGCGATGTAACTCA
FD580343       <-- GAAGGACAGCATCCCTCAGTTCATCCTCGTTCAACATGCGATGTAACTCA
FY442124       <-- GAAGGACAGCATCCCTCAGTTCATCCTCGTTCAACATGCGATGTAACTCA
EV537625       <-- GAAGGACAGCATCCCTCAGTTCATCCTCGTTCAACATGCGATGTAACTCA
FD577347       <-- GAAGGACAGCATCCCTCAGTTCA---TCGTTCAACATGCGATGTAACTCA
FD577604       <-- GAAGGACAGCATCCCTCAGTTCATCCTCGTTCAACATGCGATGTAACTCA
FD972079       <-- GAAGGACAGCATCCCTCAGTTCATCCTCGTTCAACATGCGATGTAACTCA
FD955095       <-- GAAGGACAGCATCCCTCAGTTCATCCTCGTTCAACATGCGATGTAACTCA
EY931456       <-- GAAGGACAGCATCCCTCAGTTCATCCTCGTTCAACATGCGATGTAACTCA
EY908260       <-- GAAGGACAGCATCCCTCAGTTCATCCTCGTTCAACATGCGATGTAACTCA
FD581665       --> AAAGGACAGCATCCCTCAGTTCATC---GTTCAACATGCGATGTAACTCA
FD951203       --> GAAGGACAGCATCCCTCAGTTCATCCTCGTTCAACATGCGATGTAACTCA
EY927412       --> GAAGGACAGCATCCCTCAGTTCATCCTCGTTCAACATGCGATGTAACTCA
EV541822       --> GAAGGACAGCATCCCTCAGTTCATCCTCGTTCAACATGCGATGTAACTCA
EY895075       --> GAAGGACAGCATCCCTCAGTTCATCCTCGTTCAACATGCGATGTAACTCA
EY903983       --> GAAGGACAGCATCCCTCAGTTCATCCTCGTTCAACATGCGATGTAACTCA
FD968050       --> GAAGGACAGCATCCCTCAGTTCATCCTCGTTCAACATGCGATGTAACTCA
FD581879       --> AAAGGACAGCATCCCTCAGTTCATCCTCGTTCAACATGCGATGTAACTCA
EV532496       --> GAAGGACAGCATCCCTCAGTTCATCCTCGTTCAACATGCGATGTAACTCA

               501    -    551
UN13401        --> TCCCTAGCCTCCACAACTCGGTCCCTGTCGTTGCTATCAACCACGAATAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY433778       <-- TCCCTAGCCTCCACAACTCGGTCCCTGTCGTTGCTATCAACCACGAATAT
FD580343       <-- TCCCTAGCCTCCACAACTCGGTCCCTGTCGTTGCTATCAACCACGAATAT
FY442124       <-- TCCCTAGCCTCCACAACTCGGTCCCTGTCGTTGCTATCAACCACGAATAT
EV537625       <-- TCCCTAGCCTCCACAACTCGGTCCCTGTCGTTGCTATCAACCACGAATAT
FD577347       <-- TCCCTAGCCTCCACAACTCGGTCCCTGTCGTTGCTATCAACCACGAATAT
FD577604       <-- TCCCTAGCCTCCACAACTCGGTCCCTGTCGTTGCTATCAACCACGAATAT
FD972079       <-- TCCCTGGCCTCCACAACTCGGTCCCTGTCGTTGCTATCAACCACGAATAT
FD955095       <-- TCCCTAGCCTCCACAACTCGGTCCCTGTCGTTGCTATCAACCACGAATAT
EY931456       <-- TCCCTAGCCTCCACAACTCGGTCCCTGTCGTTGCTATCAACCACGAATAT
EY908260       <-- TCCCTGGCCTCCACAACTCGGTCCCTGTCGTTGCTATCAACCACGAATAT
FD581665       --> TCCCTAGCCTCCACAACTCGGTCCCTGTCGTTGCTATCAACCACGAATAT
FD951203       --> TCCCTAGCCTCCACAACTCGGTCCCTGTCGTTGCTATCAACCACGAATAT
EY927412       --> TCCCTAGCCTCCACAACTCGGTCCCTGTCGTTGCTATCAACCACGAATAT
EV541822       --> TCCCTAGCCTCCACAACTCGGTCCCTGTCGTTGCTATCAACCACGAATAT
EY895075       --> TCCCTAGCCTCCACAACTCGGTCCCTGTCGTTGCTATCAACCACGAATAT
EY903983       --> TCCCTGGCCTCCACAACTCGGTCCCTGTCGTTGCTATCAACCACGAATAT
FD968050       --> TCCCTGGCCTCCACAACTCGGTCCCTGTCGTTGCTATCAACCACGAATAT
FD581879       --> TCCCTAGCCTCCACAACTCGGTCCCTGTCGTTGCTATCAACCACGAATAT
EV532496       --> TCCCTAGCCTCCACAACTCGGTCCCTGTCGTTGCTATCAACCACGAATAT

               551    -    601
UN13401        --> AAGACCTTGAGTGTTCTGGAAGTAGTGCCTCCACAGGGGGCGAATCTTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY433778       <-- AAGACCTTGAGTGTTCTGGAAGTAGTGCCTCCACAGGGGGCGAATCTTGT  Raphanus sativus cv GSK3-1
FD580343       <-- AAGACCTTGAGTGTTCTGGAAGTAGTGCCTCCACAGGGGGCGAATCTTGT  Raphanus sativus cv Rat-Tail Radish #3870
FY442124       <-- AAGACCTTGAGTGTTCTGGAAGTAGTGCCTCCACAGGGGGCGAATCTTGT  Raphanus sativus cv GSK3-1
EV537625       <-- AAGACCTTGAGTGTTCTGGAAGTAGTGCCTCCACAGGGGACGAATCTTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD577347       <-- AAGACCTTGAGTGTTCTGGAAGTAGTGCCTCCACAGGGGGCGAATCTTGT  Raphanus sativus cv Rat-Tail Radish #3870
FD577604       <-- AAGACCTTGAGTGTTCTGGAAGTAGTGCCTCCACAGGGGGCGAATCTTGT  Raphanus sativus cv Rat-Tail Radish #3870
FD972079       <-- AAGACCTTGAGTGTTCTGGAAGTAGTGCCTCCACAGGGGACGAATCTTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD955095       <-- AAGACCTTGAGTGTTCTGGAAGTAGTGCCTCCACAGGGGGCGAATCTTGT  Raphanus sativus cv Rat-Tail Radish #3870
EY931456       <-- AAGACCTTGAGTGTTCTGGAAGTAGTGCCTCCACAGGGGGCGAATCTTGT  Raphanus sativus var. oleiformis
EY908260       <-- AAGACCTTGAGTGTTCTGGAAGTAGTGCCTCCACAGGGGACGAATCTTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD581665       --> AAGACCTTGAGTGTTCTGGAAGTAGTGCCTCCACAGGGGGCGAATCTTGT  Raphanus sativus cv Rat-Tail Radish #3870
FD951203       --> AAGACCTTGAGTGTTCTGGAAGTAGTGCCTCCACAGGGGGCGAATCTTGT  Raphanus sativus cv Rat-Tail Radish #3870
EY927412       --> AAGACCTTGAGTGTTCTGGAAGTAGTGCCTCCACAGGGGGCGAATCTTGT  Raphanus sativus var. oleiformis
EV541822       --> AAGACCTTGAGTGTTCTGGAAGTAGTGCCTCCACAGGGGACGAATCTTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY895075       --> AAGACCTTGAGTGTTCTGGAAGTAGTGCCTCCACAGGGGGCGAATCTTGT  Raphanus raphanistrum subsp. maritimus
EY903983       --> AAGACCTTGAGTGTTCTGGAAGTAGTGCCTCCACAGGGGACGAATCTTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD968050       --> AAGACCTTGAGTGTTCTGGAAGTAGTGCCTCCACAGGGGACGAATCTTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD581879       --> AAAACCTTGAGTGTTCTGGAAGTAGTGCCTCCACAGGGGGCGAATCTTGT  Raphanus sativus cv Rat-Tail Radish #3870
EV532496       --> AAGACCTTGAGTGTTCTGGAAGTAGTGCCTCCACAGGGGGCGAATCTTGT  Raphanus raphanistrum subsp. maritimus

               601    -    651
UN13401        --> CCTGACCTCCCACATCCCAAACAGTGAAACTGATGTTCTTGTACTCAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY433778       <-- CCTGACCTCCCACATCCCAAACAGTGAAACTGATGTTCTTGTACTCAACA
FD580343       <-- CCTGACCTCCCACATCCCAAACAGTGAAACTGATGTTCTTGTACTCAACA
FY442124       <-- CCTGACCTCCCACATCCCAAACAGTGAAACTGATGTTCTTGTACTCAACA
EV537625       <-- CCTGACC...........................................
FD577347       <-- CCTGACCTCCCACATCCCAAACAGTGAAACTGATGTTCTTGTACTCAACA
FD577604       <-- CCTGACCTCCCACATCCCAAACAGTGAAACTGATGTTCTTGTACTCAACA
FD972079       <-- CCTGACCTCCCACATCCCAAACAGTGAAACTGATGTTCTTGTACTCAACA
FD955095       <-- CCTGACCTCCCACATCCCAAACAGTGAAACTGATGTTCTTGTACTCAACA
EY931456       <-- CCTGACCTCCCACATCCCAAACAGTGAAACTGATGTTCTTGTACTCAACA
EY908260       <-- CCTGACCTCCCACATCCCAAACAGTGAAACTGATGTTCTTGTACTCAACA
FD581665       --> CCTGACCTCCCACATCCCAAACAGTGAAACTGATGTTCTTGTACTCAACA
FD951203       --> CCTGACCTCCCACATCCCAAACAGTGAAACTGATGTTCTTGTACTCAACA
EY927412       --> CCTGACCTCCCACATCCCAAACAGTGAAACTGATGTTCTTGTACTCAACA
EV541822       --> CCTGACCTCCTACATCCCAAACAGTGAAACTGATGTTCTTGTACTCAACA
EY895075       --> CCTGACCTCCCACATCCCAAACAGTGAAACTGATGTTCTTGTACTCAACA
EY903983       --> CCTGACCTCCCACATCCCAAACAGTGAAACTGATGTTCTTGTACTCAACA
FD968050       --> CCTGACCTCCCACATCCCAAACAGTGAAACTGATGTTCT...........
FD581879       --> CCTGACCTCCCACATCCCAAACAGTGAAACTGATGTTCTTGTACTCAACA
EV532496       --> CCTGACCTCCCACATCCCAAACAGTGAAACTGATGTTCTTGTACTCAACA

               651    -    701
UN13401        --> GTCTCCACATTGAATCCGATGGTGGGGATGG-TGGTGACAATTTCGCCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY433778       <-- GTCTCCACATTGAATCCGATGGTGGGGATGG-TGGTGACAATTTCGCCAA
FD580343       <-- GTCTCCACATTGAATCCGATGGTGGGGATGG-TGGTGACAATTTCGCCAA
FY442124       <-- GTCTCCACATTGAATCCGATGGTGGGGATGG-TGGTGACAATTTCGCCAA
EV537625       <-- ..................................................
FD577347       <-- GTCTCCACATTGAATCCGATGGTGGGGATGG-TGGTGACAATTTCGCCAA
FD577604       <-- GTCTCCACATTGAATCCGATGGTGGGGATGG-TGGTGACAATTTCGCCAA
FD972079       <-- GTCTCCACATTGAATCCGATGGTGGGGATGG-TGGTGACAATTTCGCCAA
FD955095       <-- GTCTCCACATTGAATCCGATGGTGGGGATGG-TGGTGACAATTTCGCCAA
EY931456       <-- GTCTCCACATTGAATCCGATGGTGGGGATGG-TGGTGACAATTTCGCCAA
EY908260       <-- GTCTCCACATTGAATCCGATGGTGGGGATGG-TGGTGACAATTTCGCCAA
FD581665       --> GTCTCCACATTGAATCCGATGGTGGGGATGG-TGGTGACAA.........
FD951203       --> GTCTCCACATTGAATCCGATGGTGGGGATGG-TGGTGACAATTTCGCCAA
EY927412       --> GTCTCCACATTGAATCCGATGGTGGGGATGG-TGGTGACAATTT......
EV541822       --> GTCTCCACATTGAATCCAATGGTGGGGATGG-TGGTGACAATTTCGCCAA
EY895075       --> GTCTCCACATTGAATCCGATGGTGGGGATGG-TGGTGACAATTTCGCCAA
EY903983       --> GTCTCCACATTGAA....................................
FD968050       --> ..................................................
FD581879       --> GTCTCCACATTGAATCCGATGGTGGGGATGG-TGGTGACAATTTCGCCAA
EV532496       --> GTCTCCACATTGAATCCGATGGTGGGGATGGGTGGTGACAATTT......

               701    -    751
UN13401        --> GCTTGAGCTTGTACAAGATAGTGGTCTTACCAGCAGCATCAAGACCTACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY433778       <-- GCTTGAGCTTGTACAAGATAGTGGTCTTACCAGCAGCATCAAGACCTACC
FD580343       <-- GCTTGAGCTTGTACAAGATGGTGGTCTTACCAGCAGCATCAAGACCTACC
FY442124       <-- GCTTGAGCTTGTACAAGATAGTGGTCTTACCAGCAGCATCAAGACCTACC
EV537625       <-- ..................................................
FD577347       <-- GCTTGAGCTTGTACAAGATGGTGGTCTTACCAGCAGCATCAAGACCTACC
FD577604       <-- GCTTGAGCTTGTACAAGATAGTGGTCTTACCAGCAGCATCAAGACCTACC
FD972079       <-- GCTTGAGCTTGTACAAGATAGTGGTCTTACCAGCAGCATCAAGACCTACC
FD955095       <-- GCTTGAGCTTGTACAAGATGGTGGTCTTACCAGCAGCATCAAGACCTACC
EY931456       <-- GCTTGAGCTTGTACAAGATAGTGGTCTTACCAGCAGCATCAAGACCTACC
EY908260       <-- GCTTGAGCTTGTACAAGATAGTGGTCTTACCAGCAGCATCAAGACCTACC
FD581665       --> ..................................................
FD951203       --> GCTTGAGCTTGTACAAGATGGTGGTCTTACCAGCAGCATCAAGACCTACC
EY927412       --> ..................................................
EV541822       --> GCTTGAGCTTGTACAAGATAGTGGTCTTACCAGCAGCATCAAGACCTACC
EY895075       --> GCTTGAGCTTGTACAAGATGGTGGTCTT......................
EY903983       --> ..................................................
FD968050       --> ..................................................
FD581879       --> GCTTGAGCTTGTACAAGATAGTGGTCTTACCAGCAGCATCAAGACCTACC
EV532496       --> ..................................................

               751    -    801
UN13401        --> ATCAGAATCCTCATTTCTTTCTTGGCGAAAAGCCTGCTGAACAGCTTCGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY433778       <-- ATCAGAATCCTCATTTCTTTCTTGGCGAAAAGCCTGCTGAACAGCTTCGT
FD580343       <-- ATCAGAATCCTCATTTCTTTCTTGGCGAAAAGCCTGCTGAACAGCTTCGT
FY442124       <-- ATCAGAATCCTCATTTCTTTCTTGGCGAAAAGCCTGCTGAACAGCTTCGT
EV537625       <-- ..................................................
FD577347       <-- ATCAGAATCCTCATTTCTTTCTTGGCGAAAAGCCTGCTGAACAGCTTCGT
FD577604       <-- ATCAGAATCCTCATTTCTTTCTTGGCGAAAAGCCTGCTGAACAGCTTCGT
FD972079       <-- ATCAGAATCCTCATTTCTTTCTTGGCGAAAAGCCTGCTGAACAGCTTCGT
FD955095       <-- ATCAGAATCCTCATTTCTTTCTTGGCGAAAAGCCTGCTGAACAGCTTCGT
EY931456       <-- ATCAGAATCCTCATTTCTTTCTTGGCGAAAAGCCTGCTGAACAGCTTCGT
EY908260       <-- ATCAGAATCCTCATTTCTTTCTTGGCGAAAAGCCTGCTGAACAGCTTCGT
FD581665       --> ..................................................
FD951203       --> ATC...............................................
EY927412       --> ..................................................
EV541822       --> ATCAGAATCCTAATTT..................................
EY895075       --> ..................................................
EY903983       --> ..................................................
FD968050       --> ..................................................
FD581879       --> ATCAGAATCCTCATTTCTTTCTTGGCGAAAAGCCTGCTGAACAGCTTCGT
EV532496       --> ..................................................

               801    -    851
UN13401        --> GAAGTTAAGCCCCATCTTCCTTTAGCCTATCTATCCCTTTCGAAGAAGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY433778       <-- GAAGTTAAGCCCCATCTTCCTTTAGCCTATCTATCCCTT-CGAAGAAGGA  Raphanus sativus cv GSK3-1
FD580343       <-- GAAGTTAAGCCCCATATTCCTTTA-CCTATCTATCCCTTTCGAAGAAGGA  Raphanus sativus cv Rat-Tail Radish #3870
FY442124       <-- GAAGTTAAGCCCCATCTTCCTTTAGCCTATCTATCCCTTTCGAAGAAGGA  Raphanus sativus cv GSK3-1
EV537625       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD577347       <-- GAAGTTAAGCCCCATATTCCTTTA-CCTATCTATCCCTTTCGAAGAAGGA  Raphanus sativus cv Rat-Tail Radish #3870
FD577604       <-- GAAGTTAAGCCCCATCTTCCTTTAGCCTATCTATCCCTTTCGAAGAAGGA  Raphanus sativus cv Rat-Tail Radish #3870
FD972079       <-- GAAGTTAAGCCCCATCTTCCTTTA-CCT----ATCCCTTTCGAAGAAGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD955095       <-- GAAGTTAAGCCCCATATTCCTTTA-CCTATCTATCCCTTTCGAAGAAGGA  Raphanus sativus cv Rat-Tail Radish #3870
EY931456       <-- GAAGTTAAGCCCCATCTTCCTTTAGCCTATCTATCCCTTTCGAAGAAGGA  Raphanus sativus var. oleiformis
EY908260       <-- GAAGTTAAGCCCCATCTTCCTTTA-CCT----ATCCCTTTCGAAGAAGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD581665       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD951203       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY927412       --> ..................................................  Raphanus sativus var. oleiformis
EV541822       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY895075       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY903983       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD968050       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD581879       --> GAAGTTAAGCCCCATCTTCCTTTAGCCTATCTATCCCTTTCGAAG.....  Raphanus sativus cv Rat-Tail Radish #3870
EV532496       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               851    -    901
UN13401        --> TCTACTGTAGAGCAAGCCGCGAGTTTCGCAGAGAAAATGACTCTCCAGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY433778       <-- T.................................................
FD580343       <-- TCTACTGTAGAGCAAGCC................................
FY442124       <-- TCTACTGTAGAGCAAGCCGCGAGTT-CGCAGAG.................
EV537625       <-- ..................................................
FD577347       <-- TCTACTGTAGAGCAAGCC................................
FD577604       <-- TCTACTGTAGAGCAAGCCGCGAGTTTCGCAGAGAAAATGACTCTCCAGCT
FD972079       <-- TCTACTGTAGAGCAAGCCGCGAGTTTCGtc....................
FD955095       <-- TCTACTGTAGAGCAAGCCGCGAGTTTCcc.....................
EY931456       <-- TCTACTGTAGAGCAAGCCGCGAGTTTCGCAGAGAAAATGACTCTCCAGCT
EY908260       <-- TCTACTGTAGAGCAAGCCGCGAGTTTCGTAGAGAAAATGACTCTCCAGCT
FD581665       --> ..................................................
FD951203       --> ..................................................
EY927412       --> ..................................................
EV541822       --> ..................................................
EY895075       --> ..................................................
EY903983       --> ..................................................
FD968050       --> ..................................................
FD581879       --> ..................................................
EV532496       --> ..................................................

               901    -    951
UN13401        --> CCAATCTAATTTTAGAAATTTGTATTTTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY433778       <-- ..............................
FD580343       <-- ..............................
FY442124       <-- ..............................
EV537625       <-- ..............................
FD577347       <-- ..............................
FD577604       <-- CCAATCTAATTTTAGAAATTTGTcc.....
FD972079       <-- ..............................
FD955095       <-- ..............................
EY931456       <-- CCAATCTAATTTTAGAAATTTGTATTTTCC
EY908260       <-- CCAATCTAATccc.................
FD581665       --> ..............................
FD951203       --> ..............................
EY927412       --> ..............................
EV541822       --> ..............................
EY895075       --> ..............................
EY903983       --> ..............................
FD968050       --> ..............................
FD581879       --> ..............................
EV532496       --> ..............................