RadishBase

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Alignment for radish unigene UN13445

               1      -     51
UN13445        --> GGATCTCATTACAACTAGAAAAATAAAAAAACACAAC-ACAGAGAGAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX753218       <-- ..................................................
FD945242       <-- ..................................................
EY936539       <-- ..................................................
FD547111       <-- ..................................................
EX891825       <-- ..................................................
FD553518       <-- ..................................................
EY918701       <-- ..................................................
EY934517       <-- ..................................................
FD975270       <-- ..................................................
EY896331       <-- ..................................................
FD984696       <-- ..................................................
EY917522       <-- ..................................................
FD531606       <-- ..................................................
EV544263       <-- ..................................................
FD979177       --> GGATCTCATTACAACTAGAAAAATAAAAAAACACAAC-ACAGAGAGAGAG
FD982053       --> GGATCTCATTACAACTAGAAAAATAAAAAAACACAAC-ACAGAGAGAGAG
EX764372       --> .GATCTCATTACAACTAGAAAAATAAAAAAACACAAC-ACAGAGAGAGAG
EY915281       --> aGATCTCATTACAACTAGAAAAATAAAAAAACACAAC-ACAGAGAGAGAG
EY916205       --> .....ggATTACAACTAGAAAAATAAAAAAACACAAC-ACAGAGAGAGAG
FD536071       --> .........gatctcattacaacgAAAAAAACACAACAACACAGAGAGAG
EY922807       --> ...................................gcaACACAGAGAGAG
EX764845       --> ..................................................
EW726259       --> ..................................................
EW726847       --> ..................................................
FD988844       --> ..................................................
EY913643       --> ..................................................

               51     -    101
UN13445        --> ATCTCAAAGTTAGAAGTCTGATCCGAAA--AACAACAATGGCGTCTCTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX753218       <-- ..................................................
FD945242       <-- ..................................................
EY936539       <-- ..................................................
FD547111       <-- ..................................................
EX891825       <-- ..................................................
FD553518       <-- ..................................................
EY918701       <-- ..................................................
EY934517       <-- ..................................................
FD975270       <-- ..................................................
EY896331       <-- ..................................................
FD984696       <-- ..................................................
EY917522       <-- ..................................................
FD531606       <-- ..................................................
EV544263       <-- ..................................................
FD979177       --> ATCTCAAAGTTAGAAGTCTGATCCGAAA--AACAACAATGGCGTCTCTCA
FD982053       --> ATCTCAAAGTTAGAAGTCTGATCCGAAA--AACAACAATGGCGTCTCTCA
EX764372       --> ATCTCAAAGTTAGAAGTCTGATCCGAAA--AACAACAATGGCGTCTCTCA
EY915281       --> ATCTCAAAGTTAGAAGTCTGATCCGAAA--AACAACAATGGCGTCTCTCA
EY916205       --> ATCTCAAAGTTAGAAGTCTGATCCGAAA--AACAACAATGGCGTCTCTCA
FD536071       --> ATCTCAAAGTTAGAAGTCTGATCCCAAAGAAACAACAATGGCGTCTCTCA
EY922807       --> ATCTCAAAGTTAGAAGTCTGATCCCAAAGAAACAACAATGGCGTCTCTCA
EX764845       --> ..................................................
EW726259       --> ..................................................
EW726847       --> ..................................................
FD988844       --> ..................................................
EY913643       --> ..................................................

               101    -    151
UN13445        --> AAGTCCCGAGCAATGTCCCTCTCCCCGAAGATGATGCCGAGCAACTCCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX753218       <-- ..................................................
FD945242       <-- ..................................................
EY936539       <-- ..................................................
FD547111       <-- ..................................................
EX891825       <-- ..................................................
FD553518       <-- ..................................................
EY918701       <-- ..................................................
EY934517       <-- ..................................................
FD975270       <-- ..................................................
EY896331       <-- ..................................................
FD984696       <-- ..................................................
EY917522       <-- ..................................................
FD531606       <-- ..................................................
EV544263       <-- ..................................................
FD979177       --> AAGTCCCGAGCAATGTCCCTCTCCCCGAAGATGATGCCGAGCAACTCCAC
FD982053       --> AAGTCCCGAGCAATGTCCCTCTCCCCGAAGATGATGCCGAGCAACTCCAC
EX764372       --> AAGTCCCGAGCAATGTCCCTCTCCCCGAAGATGATGCCGAGCAACTCCAC
EY915281       --> AAGTCCCGAGCAATGTCCCTCTCCCCGAAGATGATGCCGAGCAACTCCAC
EY916205       --> AAGTCCCGAGCAATGTCCCTCTCCCCGAAGATGATGCCGAGCAACTCCAC
FD536071       --> AAGTCCCGAGCAATGTCCCTCTCCCCGAAGATGATGCCGAGCAACTCCAC
EY922807       --> AAGTCCCGAGCAATGTCCCTCTCCCCGAAGATGATGCCGAGCAACTCCAC
EX764845       --> ..................................................
EW726259       --> ..................................................
EW726847       --> ..................................................
FD988844       --> ..................................................
EY913643       --> ..................................................

               151    -    201
UN13445        --> AAGGCTTTCTCAGGATGGGGTACAAACGAGAAGCTGATCATATCAATTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX753218       <-- ..................................................
FD945242       <-- ..................................................
EY936539       <-- ..................................................
FD547111       <-- ..................................................
EX891825       <-- ..................................................
FD553518       <-- ..................................................
EY918701       <-- ..................................................
EY934517       <-- ..................................................
FD975270       <-- ..................................................
EY896331       <-- ..................................................
FD984696       <-- ..................................................
EY917522       <-- ..................................................
FD531606       <-- ..................................................
EV544263       <-- ..................................................
FD979177       --> AAGGCTTTCTCAGGATGGGGTACAAACGAGAAGCTGATCATATCAATTCT
FD982053       --> AAGGCTTTCTCAGGATGGGGTACAAACGAGAAGCTGATCATATCAATTCT
EX764372       --> AAGGCTTTCTCAGGATGGGGTACAAACGAGAAGCTGATCATATCAATTCT
EY915281       --> AAGGCTTTCTCAGGATGGGGTACAAACGAGAAGCTGATCATATCAATTCT
EY916205       --> AAGGCTTTCTCAGGATGGGGTACAAACGAGAAGCTGATCATATCAATTCT
FD536071       --> AAGGCTTTCTCCGGATGGGGTACAAACGAGAAGCTGATCATATCAATTCT
EY922807       --> AAGGCTTTCTCCGGATGGGGTACAAACGAGAAGCTGATCATATCAATTCT
EX764845       --> ..................................................
EW726259       --> ..................................................
EW726847       --> ..................................................
FD988844       --> ..................................................
EY913643       --> ..................................................

               201    -    251
UN13445        --> AGCACACAGGAACGCAGCACAACGCAGCATGATCCGCAGCGTTTACGCCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX753218       <-- ..............................................GCCG
FD945242       <-- ..................................................
EY936539       <-- ..................................................
FD547111       <-- ..................................................
EX891825       <-- ..................................................
FD553518       <-- ..................................................
EY918701       <-- ..................................................
EY934517       <-- ..................................................
FD975270       <-- ..................................................
EY896331       <-- ..................................................
FD984696       <-- ..................................................
EY917522       <-- ..................................................
FD531606       <-- ..................................................
EV544263       <-- ..................................................
FD979177       --> AGCACACAGGAACGCGGCACAACGCAGCATGATCCGCAGCGTTTACGCCG
FD982053       --> AGCACACAGGAACGCAGCACAACGCAGCATGATCCGCAGTGTTTACGCCG
EX764372       --> AGCACACAGGAACGCAGCACAACGCAGCATGATCCGCAGCGTTTACGCCG
EY915281       --> AGCACACAGGAACGCAGCACAACTCAGCATGATCCGCAGCGTTTACGCCG
EY916205       --> AGCACACAGGAACGCAGCACAACGCAGCATGATCCGCAGCGTTTACGCCG
FD536071       --> AGCACACAGGAACGCAGCACAACGCAGCATGATCCGCAGCGTTTACGCCG
EY922807       --> AGCACACAGGAACGCAGCACAACGCAGCATGATCCGCAGCGTTTACGCCG
EX764845       --> ..................................................
EW726259       --> ..................................................
EW726847       --> ..................................................
FD988844       --> ..................................................
EY913643       --> ..................................................

               251    -    301
UN13445        --> CTACTTACAATGAGGATCTCCTCAAGGCCTTAGACAAAGAGCTCTCTAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX753218       <-- CTACTTACA-TGAGGATCTCCTCAAGGC-TTAGACAAAGAGCTCTCCAGC
FD945242       <-- .........................aggCTTAGACAAAGAGCTCTCTAGT
EY936539       <-- ................................GACAAAGAGCTCTCTAGT
FD547111       <-- ................................GACAAAGAGCTCTCTAGT
EX891825       <-- ..................................................
FD553518       <-- ..................................................
EY918701       <-- ..................................................
EY934517       <-- ..................................................
FD975270       <-- ..................................................
EY896331       <-- ..................................................
FD984696       <-- ..................................................
EY917522       <-- ..................................................
FD531606       <-- ..................................................
EV544263       <-- ..................................................
FD979177       --> CTACTTACAATGAGGATCTCCTCAAGGCCTTAGACAAAGAGCTCTCTAGT
FD982053       --> CTACTTACAATGAGGATCTCCTCAAGGCCTTAGACGAAGAGCTCTCTAGT
EX764372       --> CTACTTACAATGAGGATCTCCTCAAGGCCTTAGACAAAGAGCTCTCTAGT
EY915281       --> CTACTTACAATGAGGATCTCCTCAAGGCCTTAGACAAAGAGCTCTCTAGT
EY916205       --> CTACTTACAATGAGGATCTCCTCAAGGCCTTAGACAAAGAGCTCTCTAGT
FD536071       --> CTACTTACAATGAGGATCTCCTCAAGGCCTTAGACAAAGAGCTCTCTAGT
EY922807       --> CTACTTACAATGAGGATCTCCTCAAGGCCTTAGACAAAGAGCTCTCTAGT
EX764845       --> ..................................CAAAGAGCTCTCTAGT
EW726259       --> ..................................................
EW726847       --> ..................................................
FD988844       --> ..................................................
EY913643       --> ..................................................

               301    -    351
UN13445        --> GACTTTGAGAGAGCTGTGATGTTGTGGACGCTCGATCCAGCGGAGAGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX753218       <-- GACTT-GAGAGAGCTGTGATGTTGTGGACGCTTGATCCAGCGGAGAGAGA
FD945242       <-- GACTT-GAGAGAGCTGTGATGTTGTGGACGCTCGATCCAGCGGAGAGAGA
EY936539       <-- GACTTTGAGAGAGCTGTGATGTTGTGGACGCTCGATCCAGCGGAGAGAGA
FD547111       <-- GACTT-GAGAGAGCTGTGATGT-GTGGACGCTCGATCCAGCGGAGAGAGA
EX891825       <-- .......AGAGAGCTGTGATGTTGTGGACGCTTGATCCAGCGGAGAGAGA
FD553518       <-- ..................................................
EY918701       <-- ..................................................
EY934517       <-- ..................................................
FD975270       <-- ..................................................
EY896331       <-- ..................................................
FD984696       <-- ..................................................
EY917522       <-- ..................................................
FD531606       <-- ..................................................
EV544263       <-- ..................................................
FD979177       --> GACTTTGAGAGAGCTGTGATGTTGTGGACGCTCGATCCAGCGGAGAGAGA
FD982053       --> GACTTTGAGAGAGCTGTGATGTTGTGGACGCTCGATCCAGCGGAGAGAGA
EX764372       --> GACTTTGAGAGAGCTGTGATGTTGTGGACGCTCGATCCATCGGAGAGAGA
EY915281       --> GACTTTGAGAGAGCTGTGATGTTGTGGACGCTCGATCCAGCGGAGAGAGA
EY916205       --> GACTTTGAGAGAGCTGTGATGTTGTGGACGCTCGATCCAGCGGAGAGAGA
FD536071       --> GACTTTGAGAGAGCTGTGATGTTGTGGACGCTCGATCCAGCGGAGAGAGA
EY922807       --> GACTTTGAGAGAGCTGTGATGTTGTGGACGCTCGATCCAGCGGAGAGAGA
EX764845       --> GACTTTGAGAGAGCTGTGATGTTGTGGACGCTTGATCCAGCGGAGAGAGA
EW726259       --> ..................................................
EW726847       --> ..................................................
FD988844       --> ..................................................
EY913643       --> ..................................................

               351    -    401
UN13445        --> CGCTTACTTGGCCAAAGAATCCACCAAAATGTTCACCAAGAACAACTGGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX753218       <-- CGCTTACTTGGCCAAAGAATCCACCAAAATGTTCACCAAGAACAACTGGG
FD945242       <-- CGCTTACTTGGCCAAAGAATCCACCAAAATGTTCACCAAGGACAACTGGG
EY936539       <-- CGCTTACTTGGCCAAAGAATCCACCAAAATGTTCACCAAGAACAACTGGG
FD547111       <-- CGCTTACTTGGCCAAAGAATCCACCAAAATGTTCACCAAGAACAACTGGG
EX891825       <-- CGCTTACTTGGCCAAAGAATCCACCAAAATGTTCACCAAGAACAACTGGG
FD553518       <-- ..................................................
EY918701       <-- ..................................................
EY934517       <-- ..................................................
FD975270       <-- ..................................................
EY896331       <-- ..................................................
FD984696       <-- ..................................................
EY917522       <-- ..................................................
FD531606       <-- ..................................................
EV544263       <-- ..................................................
FD979177       --> CGCTTACTTGGCCAAAGAATCCACCAAAATGTTCACCAAGAACAACTGGG
FD982053       --> CGCCTACTTGGCCAAAGAATCCACCAAAATGTTCACCAAGA-TAACTGGG
EX764372       --> CGCTTACTTGGCCAAAGAATCCACCAAAATGTTCACCAAGAACAACTGGG
EY915281       --> CGCTTACTTGGCCAAAGAATCCACCAAAATGTCCACCAAGAACAACTGGG
EY916205       --> CGCTTACTTGGCCAAAGAATCCACCAAAATGTTCACCAAGAACAACTGGG
FD536071       --> CGCTTACTTGGCCAAAGAATCCACCAAAATGTTCACCAAGAACAACTGGG
EY922807       --> CGCTTACTTGGCCAAAGAATCCACCAAAATGTTCACCAAGAACAACTGGG
EX764845       --> CGCTTACTTGGCCAAAGAATCCACCAAAATGTTCACCAAGAACAACTGGG
EW726259       --> ..................................................
EW726847       --> ..................................................
FD988844       --> ..................................................
EY913643       --> ..................................................

               401    -    451
UN13445        --> TTCTCGTCGAGATCGCTTGCACTAGGTCCGCCGTCGAGCTTTTCAAGATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX753218       <-- TTCTCGTCGAGATCGCTTGCACTAGGTCCGCCGTCGAGCTTTTCAAGATA  Raphanus raphanistrum subsp. maritimus
FD945242       <-- TTCTCGTCGAGATCGCTTGCACGAGGTCTGCCGTCGAGCTTTTCAAGGTA  Raphanus sativus cv Early Scarlet Globe
EY936539       <-- TTCTCGTCGAGATCGCTTGCACGAGGTCTGCCGTCGAGCTTTTCAAGGTA  Raphanus sativus cv Early Scarlet Globe
FD547111       <-- TTCTCGTCGAGATCGCTTGCACTAGGTCCGCCGTCGAGCTTTTCAAGATA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX891825       <-- TTCTCGTCGAGATCGCTTGCACGAGGTCCGCCGTCGAGCTTTTCAAGGTA  Raphanus sativus var. oleiformis
FD553518       <-- ...TCGTCGAGATCGCTTGCACGAGGTCTGCCGTCGAGCTTTTCAAGGTA  Raphanus raphanistrum subsp. landra
EY918701       <-- .......................AGGTCCCCCGTCGAGCTTTTCAAGATA  Raphanus raphanistrum subsp. landra
EY934517       <-- ...................................GAGCTTTTCAAGGTA  Raphanus sativus cv Early Scarlet Globe
FD975270       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY896331       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD984696       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY917522       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD531606       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV544263       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD979177       --> TTCTCGTCGAGATCGCTTGCACTAGGTCCGCCGTCGAGCTTTTCAAGATA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD982053       --> TTCTCGTCGAGATCGCTTGCACTAGGTCCGCCGTCGAGCTTTTCAAGATA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX764372       --> TTCTCGTCGAGATCGCTTGCACTAGGTCCGCCGTCGAGCTTTTCAAGATA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY915281       --> TTCTCGTCGAGATCGCTTGCACTAGGTCCGCCGTCGAGCTTTTCAAGATA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY916205       --> TTCTCGTCGAGATCGCTTGCACTAGGTCCGCCGTCGAGCTTTTCAAGATA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD536071       --> TTCTCGTCGAGATCGCTTGCACTAGGTCCGCCGTCGAGCTTTTCAAGATA  Raphanus raphanistrum subsp. maritimus
EY922807       --> TTCTCGTCGAGATCGCTTGCACTAGGTCCGCCGTCGAGCTTTTCAAGATA  Raphanus raphanistrum subsp. landra
EX764845       --> TCCTCGTCGAGATCGCTTGCACGAGGTCTGCCGTCGAGCTTTTCAAGGTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW726259       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EW726847       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD988844       --> ..................................................  Raphanus raphanistrum subsp. landra
EY913643       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               451    -    501
UN13445        --> AAGCAAGCTTACCAAGCCCGTTACAAGAAATCACTCGAGGAAGACGTTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX753218       <-- AAGCAAGCTTACCAAGCTCGTTACAAGAAATCCCTCGAGGAAGACGTCGC  Raphanus raphanistrum subsp. maritimus
FD945242       <-- AAGCAAGCTTACCAAGCTCGTTACAAGAAATCCCTCGAGGAAGACGTTGC  Raphanus sativus cv Early Scarlet Globe
EY936539       <-- AAGCAAGCTTACCAAGCTCGTTACAAGAAATCCCTCGAGGAAGACGTTGC  Raphanus sativus cv Early Scarlet Globe
FD547111       <-- AAGCAAGCTTACCAAGCCCGTTACAAGAAATCACTCGAGGAAGACGTTGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX891825       <-- AAGCAAGCTTACCAAGCTCGTTACAAAAAATCCCTCGAGGAAGACGTCGC  Raphanus sativus var. oleiformis
FD553518       <-- AAGCAAGCTTACCAAGCCCGTTACAAGAAATCACTCGAGGAAGACGTCGC  Raphanus raphanistrum subsp. landra
EY918701       <-- AAGCAAGCTTACCAAGCCCGTTACAAGAAATCACTCGAGGAAGATGTTGC  Raphanus raphanistrum subsp. landra
EY934517       <-- AAGCAAGCTTACCAAGCTCGTTACAAGAAATCCCTCGAGGAAGACGTTGC  Raphanus sativus cv Early Scarlet Globe
FD975270       <-- ...CAAGCTTACCAAGCCCGTTACAAGAAATCACTCGAGGAAGACGTTGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY896331       <-- ............CAAGCCCGTTACAAGAAATCCCTCGAGGAAGACGTTGC  Raphanus raphanistrum subsp. maritimus
FD984696       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY917522       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD531606       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV544263       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD979177       --> AAGCAAGCTTACCAAGCCCGTTACAAGAAATCACTCGAGGAAGACGTTGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD982053       --> AAGCAAGCTTACCAAGCCCGTTACAAGAAATCACTCGAGGAAGACGTTGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX764372       --> AAGCAAGCTTACCAAGCCCGTTACAAGAAATCACTCGAGGAAGACGTTGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY915281       --> AAGCAAGCTTACCAAGCCCGTTACAAGAAATCACTCGAGGAAGACGTTGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY916205       --> AAGCAAGCTTACCAAGCCCGTTACAAGAAATCACTCGAGGAAGACGTTGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD536071       --> AAGCAAGCTTACCAAGCTCGCTACAAGAAATCCCTCGAGGAAGACGTCGC  Raphanus raphanistrum subsp. maritimus
EY922807       --> AAGCAAGCTTACCAAGCCCGTTACAAGAAATCACTCGAGGAAGATGTTGC  Raphanus raphanistrum subsp. landra
EX764845       --> AAGCAAGCTTACCAAGCTCGTTACAAAAAATCCCTCGAGGAAGACGTTGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW726259       --> ..............................................gTGC  Raphanus sativus cv Early Scarlet Globe
EW726847       --> ..............................................gTGC  Raphanus sativus cv Early Scarlet Globe
FD988844       --> ..................................................  Raphanus raphanistrum subsp. landra
EY913643       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               501    -    551
UN13445        --> TCAGCACACTTCCGGTGACCTCCGCAAGCTCCTGCTTCCTCTGGTCAGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX753218       <-- TCAGCACACTTCCGGTGACCTCCGCAAGCTCCTGCTTCCTCTGGTCAGCA  Raphanus raphanistrum subsp. maritimus
FD945242       <-- TCAGCACACATCCGGTGACCTCCGCAAGCTCCTGCTTCCTCTGGTCAGCA  Raphanus sativus cv Early Scarlet Globe
EY936539       <-- TCAGCACACATCCGGTGACCTCCGCAAGCTCCTGCTTCCTCTGGTCAGCA  Raphanus sativus cv Early Scarlet Globe
FD547111       <-- TCAGCACACTTCCGGTGACCTCCGCAAGCTCCTGCTTCCTCTGGTCAGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX891825       <-- TCAGCACACATCCGGTGACCTCCGCAAGCTCCTGCTTCCTCTGGTCAGCA  Raphanus sativus var. oleiformis
FD553518       <-- TCAGCACACTTCCGGTGACCTCCGCAAGCTCCTGCTTCCTCTGGTCAGCA  Raphanus raphanistrum subsp. landra
EY918701       <-- TCAGCACACTTCCGGTGACCTCCGCAAGCTCCTGCTTCCTCTGGTCAGCA  Raphanus raphanistrum subsp. landra
EY934517       <-- TCAGCACACATCCGGTGACCTCCGCAAGCTCCTGCTTCCTCTGGTCAGCA  Raphanus sativus cv Early Scarlet Globe
FD975270       <-- TCAGCACACTTCCGGTGACCTCCGCAAGCTCCTGCTTCCTCTGGTCAGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY896331       <-- TCAGCACACATCCGGTGACCTCCGCAAGCTCCTGCTTCCTCTGGTCAGCA  Raphanus raphanistrum subsp. maritimus
FD984696       <-- .gAGCACACTTCCGGTGACCTCCGCAAGCTCCTGCTTCCTCTGGCCAGCA  Raphanus raphanistrum subsp. landra
EY917522       <-- ....................TCCGCAAGCTCCTGCTTCCTCTGGTCAGCA  Raphanus raphanistrum subsp. landra
FD531606       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV544263       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD979177       --> TCAGCACACTTCCGGTGACCTCCGCAAGCTCCTGCTTCCTCTGGTCAGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD982053       --> TCAGCACACTTCCGGTGACCTCCGCAAGCTCCTGCTTCCTCTGGTCAGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX764372       --> TCAGCACACTTCCTGTGACCTCCGCAAGCTCCTGCTTCCTCTGGTCAGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY915281       --> TCAGCACACTTCCGGTGACCTCCGCAAGCTCCTGCTTCCTCTGGTCAGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY916205       --> TCAGCACACTTCCCGTGACCTCCGCAAGCTCCTGCTTCCTCTGGTCAGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD536071       --> TCAGCACACTTCCGGTGACCTCCGCAAGCTCCTGCTTCCTCTGGTCAGCA  Raphanus raphanistrum subsp. maritimus
EY922807       --> TCAGCACACTTCCGGTGACCTCCGCAAGCTCCTGCTTCCTCTGGTCAGCA  Raphanus raphanistrum subsp. landra
EX764845       --> TCAGCACACATCCGGTGACCTCCGCAAGCTCCTGCTTCCTCTGGTCAGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW726259       --> TCAGCACACATCCGGTGACCTCCGCAAGCTCCTGCTTCCTCTGGTCAGCA  Raphanus sativus cv Early Scarlet Globe
EW726847       --> TCAGCACACATCCGGTGACCTCCGCAAGCTCCTGCTTCCTCTGGTCAGCA  Raphanus sativus cv Early Scarlet Globe
FD988844       --> ....................TCCGCAAGCTCCTGCTTCCTCTGGCCAGCA  Raphanus raphanistrum subsp. landra
EY913643       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               551    -    601
UN13445        --> CTTTCAGGTACGAAGGAGACGACGTCAACATGATGCTCGCGAGATCCGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX753218       <-- CTTTCCGGTACGAAGGAGACGACGTCAACATGATGCTCGCGAGATCTGAA  Raphanus raphanistrum subsp. maritimus
FD945242       <-- CCTTCAGGTACGAAGGAGACGACGTGAACATGATGCTCGCGAGATCCGAA  Raphanus sativus cv Early Scarlet Globe
EY936539       <-- CCTTCAGGTACGAAGGAGACGACGTGAACATGATGCTCGCGAGATCCGAA  Raphanus sativus cv Early Scarlet Globe
FD547111       <-- CTTTCAGGTACGAAGGAGACGACGTCAACATGATGCTCGCGAGATCCGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX891825       <-- CCTTCAGGTACGAAGGAGACGACGTCAACATGATGCTCGCGAGATCCGAA  Raphanus sativus var. oleiformis
FD553518       <-- CTTTCCGGTACGAAGGAGACGACGTCAACATGATGCTCGCGAGATCCGAA  Raphanus raphanistrum subsp. landra
EY918701       <-- CTTTCAGGTACGAAGGAGACGACGTCAACATGATGCTCGCGAGATCCGAA  Raphanus raphanistrum subsp. landra
EY934517       <-- CCTTCAGGTACGAAGGAGACGACGTGAACATGATGCTCGCGAGATCCGAA  Raphanus sativus cv Early Scarlet Globe
FD975270       <-- CTTTCAGGTACGAAGGAGACGACGTCAACATGATGCTCGCGAGATCCGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY896331       <-- CTTTCAGGTACGAAGGAGACGACGTGAACATGATGCTCGCGAGATCCGAA  Raphanus raphanistrum subsp. maritimus
FD984696       <-- CTTTCCGGTACGAAGGAGACGACGTCAACATGATGCTCGCGAGATCCGAA  Raphanus raphanistrum subsp. landra
EY917522       <-- CTTTCCGGTACGAAGGAGACGACGTCAACATGATGCTCGCGAGATCCGAA  Raphanus raphanistrum subsp. landra
FD531606       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV544263       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD979177       --> CTTTCAGGTACGAAGGAGACGACGTCAACATGATGCTCGCGAGATCCGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD982053       --> CTTTCAGGTACGAAGGAGACGACGTCGACATGATGCTCGCGAGATCCGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX764372       --> CTTTCAGGTACGAAGGAGACGACGTCAACATGATGCTCGCGAGATCCGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY915281       --> CTTTCAGGTACGAAGGAGACGACTTCAACATGATGCTCGCGAGATCCGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY916205       --> CTTTCAG-TACGAAG-AGACGACGTCAACATGATGCTCGCGAGATCCGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD536071       --> CTTTCCGGTACGAAGGAGACGACGTCAACATGATGCTCGCGAGATCCGAA  Raphanus raphanistrum subsp. maritimus
EY922807       --> CTTTCAGGTACGAAGGAGACGACGTCAACATGATGCTCGCGAGATCCGAA  Raphanus raphanistrum subsp. landra
EX764845       --> CTTTCAGGTACGAAGGAGACGACGTGAACATGATGCTCGCGAGATCCGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW726259       --> CCTTCAGGTACGAAGGAGACGACGTGAACATGATGCTCGCGAGATCCGAA  Raphanus sativus cv Early Scarlet Globe
EW726847       --> CCTTCAGGTACGAAGGAGACGACGTGAACATGATGCTCGCGAGATCCGAA  Raphanus sativus cv Early Scarlet Globe
FD988844       --> CTTTCCGGTACGAAGGAGACGACGTCAACATGATGCTCGCGAGATCCGAA  Raphanus raphanistrum subsp. landra
EY913643       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               601    -    651
UN13445        --> GCCAAGCTGCTTCACGAGAAGGTCTCCGAGAAAGCTTTCAACGACGATGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX753218       <-- GCCAATCTGCTTCACGAGAAGGTCTCCGAGAAAGCTTTCAACGACGATGA  Raphanus raphanistrum subsp. maritimus
FD945242       <-- GCCAAGCTGCTTCACGAGAAGGTCTCCGAGAAAGCTTTCAACGACGATGA  Raphanus sativus cv Early Scarlet Globe
EY936539       <-- GCCAAGCTGCTTCACGAGAAGGTCTCCGAAAAAGCTTTCAACGACGATGA  Raphanus sativus cv Early Scarlet Globe
FD547111       <-- GCCAAGCTGCTTCACGAGAAAGTCTCCGAGAAAGCTTTCAACGACGATGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX891825       <-- GCCAAGCTGCTTCACGAGAAAGTCTCCGAGAAAGCTTTCAACGACGATGA  Raphanus sativus var. oleiformis
FD553518       <-- GCCAAGCTGCTTCACGAGAAGGTCTCCGAGAAAGCTTTCAACGACGATGA  Raphanus raphanistrum subsp. landra
EY918701       <-- GCCAAGCTGCTTCACGAGAAAGTCTCCGAGAAAGCTTTCAACGACGATGA  Raphanus raphanistrum subsp. landra
EY934517       <-- GCCAAGCTGCTTCACGAGAAGGTCTCCGAGAAAGCTTTCAACGACGATGA  Raphanus sativus cv Early Scarlet Globe
FD975270       <-- GCCAAGCTGCTTCACGAGAAAGTCTCCGAGAAAGCTTTCAACGACGATGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY896331       <-- GCCAAGCTGCTTCACGAGAAGGTCTCCGAGAAAGCTTTCAACGACGATGA  Raphanus raphanistrum subsp. maritimus
FD984696       <-- GCCAAGCTGCTTCACGAGAAGGTCTCCGAGAAAGCTTTCAACGACGATGA  Raphanus raphanistrum subsp. landra
EY917522       <-- GCCAAGCTGCTTCACGAGAAGGTCTCCGAGAAAGCTTTCAACGACGATGA  Raphanus raphanistrum subsp. landra
FD531606       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV544263       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD979177       --> GCCAAGCTGCTTCACGAGAAAGTCTCCGAGAAAGCTTTCAACGACGATGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD982053       --> GCCAAGCTGCTTCACGAGAAAGTCTCCGAGAAAGCTTTCAACGACAATGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX764372       --> GCCAAGCTGCTTCACGAGAAAGTCTCCGAGAAAGCTTTCAACGACGATGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY915281       --> GCCAAGCTGCTTCACGAGAAAGTCTCCGAGAAAGCTTTCAACGACGATGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY916205       --> GCCAAGCTGCTTCACGAGAAAGTCTC-GAGAAAGCTTTCA-CGACGATGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD536071       --> GCCAAGCTGCTTCACGAGAAGGTCTCCGAGAAAGCTTTCAACGACGATGA  Raphanus raphanistrum subsp. maritimus
EY922807       --> GCCAAGCTGCTTCACGAGAAAGTCTCCGAGAAAGCTTTCAACGACGATGA  Raphanus raphanistrum subsp. landra
EX764845       --> GCCAAGCTGCTTCACGAGAAAGTCTCCGAGAAAGCCTTCAACGACGATGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW726259       --> GCCAAGCTGCTTCACGAGAAGGTCTCCGAGAAAGCTTTCAACGACGATGA  Raphanus sativus cv Early Scarlet Globe
EW726847       --> GCCAAGCTGCTTCACGAGAAGGTCTCCGAGAAAGCTTTCAACGACGATGA  Raphanus sativus cv Early Scarlet Globe
FD988844       --> GCCAAGCTGCTTCACGAGAAGGTCTCCGAGAAAGCTTTCAACGACGATGA  Raphanus raphanistrum subsp. landra
EY913643       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               651    -    701
UN13445        --> CTTCATCAGAATCTTGACCACGAGAAGCAAAGCTCAGCTCGGTGCTACTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX753218       <-- CTTCATCAGAATCTTGACTACGAGAAGCAAAGCTCAGCTCGGTGCTACTC  Raphanus raphanistrum subsp. maritimus
FD945242       <-- CTTCATCAGAATCTTGACCACGAGAAGCAAAGCTCAGCTCGGTGCTACTC  Raphanus sativus cv Early Scarlet Globe
EY936539       <-- CTTCATCAGAATCTTGACCACGAGAAGCAAAGCTCAGCTCGGTGCTACTC  Raphanus sativus cv Early Scarlet Globe
FD547111       <-- CTTCATCAGAATCTTGACCACGAGAAGCAAAGCTCAGCTCGGTGCTACTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX891825       <-- CTTCATCAGAATCTTGACTACTAGAAGCAAAGCTCAGCTCGGTGCTACTC  Raphanus sativus var. oleiformis
FD553518       <-- CTTCATCAGAATCTTGACTACGAGAAGCAAAGCTCAGCTCGGTGCTACTC  Raphanus raphanistrum subsp. landra
EY918701       <-- CTTCATCAGAATCTTGACTACGAGAAGCAAAGCTCAGCTCGGTGCTACTC  Raphanus raphanistrum subsp. landra
EY934517       <-- CTTCATCAGAATCTTGACCACGAGAAGCAAAGCTCAGCTCGGTGCTACTC  Raphanus sativus cv Early Scarlet Globe
FD975270       <-- CTTCATCAGAATCTTGACCACGAGAAGCAAAGCTCAGCTCGGTGCTACTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY896331       <-- CTTCATCAGAATCTTGACTACTAGAAGCAAAGCTCAGCTCGGTGCTACTC  Raphanus raphanistrum subsp. maritimus
FD984696       <-- CTTCATCAGAATCTTGACTACGAGAAGCAAAGCTCAGCTCGGTGCTACTC  Raphanus raphanistrum subsp. landra
EY917522       <-- CTTCATCAGAATCTTGACTACGAGAAGCAAAGCTCAGCTCGGTGCTACTC  Raphanus raphanistrum subsp. landra
FD531606       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV544263       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD979177       --> CTTCATCAGAATCTTGACCACGAGAAGCAAAGCTCAGCTCGGTGCTACTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD982053       --> CTTCATC-GAATCTTGACCACGAGAAGCAAAGCTCAGCTCGGTGCTACTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX764372       --> CTTCATCAGAATCTTGACCACGAGAAGCAAAGCTCAGCTCGGTGCTACTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY915281       --> CTTCATCAGAATCTTGACCACGAGAAGCAAAGCTCAGCTCGGTGCTACTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY916205       --> CTTCATC...........................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD536071       --> CTTCATCAGAATCTTGACTACGAGAAGCAAAGCTCAGCTCGGTGCTACTC  Raphanus raphanistrum subsp. maritimus
EY922807       --> CTTCATCAGAATCTTGACTACGAGAAGCAAAGCTCAGCTCGGTGCTACTC  Raphanus raphanistrum subsp. landra
EX764845       --> CTTCATCAGAATCTTGACCACGAGAAGCAAAGCTCAGCTCGGTGCTACTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW726259       --> CTTCATCAGAATCTTGACCACGAGAAGCAAAGCTCAGCTCGGTGCTACTC  Raphanus sativus cv Early Scarlet Globe
EW726847       --> CTTCATCAGAATCTTGACCACGAGAAGCAAAGCTCAGCTCGGTGCTACTC  Raphanus sativus cv Early Scarlet Globe
FD988844       --> CTTCATCAGAATCTTGACTACGAGAAGCAAAGCTCAGCTCGGTGCTACTC  Raphanus raphanistrum subsp. landra
EY913643       --> ..gCATCAGAATCTTGACCACGAGAAGCAAAGCTCAGCTCGGTGCTACTC  Raphanus raphanistrum subsp. raphanistrum (NY)

               701    -    751
UN13445        --> TCAACCACTACAACAATGAACATGGTAACTCCATCAACAAGAACTTGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX753218       <-- TCAACCACTACAACAATGAACATGGTAACTCCATCAACAAGAACTTGAAG
FD945242       <-- TCAACCACTACAACAATGAACATGGTAACTCCATCAACAAGAACTTGAAG
EY936539       <-- TCAACCACTACAACAATGAACATGGTAACTCCATCAACAAGAACTTGAAG
FD547111       <-- TCAACCACTACAACAATGAACATGGTAACTCCATCAACAAGAACTTGAAG
EX891825       <-- TCAACCACTACAACAATGAACATGGTAACTCCATCAACAAGAACTTGAAG
FD553518       <-- TCAACCACTACAACAATGAACATGGTAACTCCATCAACAAGAACTTGAAG
EY918701       <-- TCAACCACTACAACAATGAACATGGTAACTCCATCAACAAGAACTTGAAG
EY934517       <-- TCAACCACTACAACAATGAACATGGTAACTCCATCAACAAGAACTTGAAG
FD975270       <-- TCAACCACTACAACAATGAACATGGTAACTCCATCAACAAGAACTTGAAG
EY896331       <-- TCAACCACTACAACAATGAACATGGTAACTCCATCAACAAGAACTTGAAG
FD984696       <-- TCAACCACTACAACAATGAACATGGTAACTCCATCAACAAGAACTTGAAG
EY917522       <-- TCAACCACTACAACAATGAACATGGTAACTCCATCAACAAGGACTTGAAG
FD531606       <-- ..................................................
EV544263       <-- ..................................................
FD979177       --> TCAACCACTACAACAATGAACATGGTAACTCCATCAACAAGA-CTTGAAG
FD982053       --> TCAACCACTACAACAATGAACATGGTAACTCCATCAACAAGAACTTGAAG
EX764372       --> TCA-CCACTACA-CA-TGAACATGGTAACTCCATCA-CA-GA-CTTGAAG
EY915281       --> TCAACCACTACAACAATGAACATG..........................
EY916205       --> ..................................................
FD536071       --> TCAACCACTACAACAATGAACA............................
EY922807       --> TCAACCACTACAACAATGAACATGGTAACTCCATCAACAgacttga....
EX764845       --> TCAACCACTACAACAATGAACATGGTAACTCCATCAACAAGAACTTGAAG
EW726259       --> TCAACCACTACAACAATGAACATGGTAACTCCATCAACAAGAACTTGAAG
EW726847       --> TCAACCACTACAACAATGAACATGGTAACTCCATCAACAAGAACTTGAAG
FD988844       --> TCAACCACTACAACAATGAACATGGTAACTCCATCAACAAGAACTTGAAG
EY913643       --> TCAACCACTACAACAATGAACATGGTAACTCCATCAACAAGAACTTGAAG

               751    -    801
UN13445        --> GAAGGTTCGGATGATGATTACCTGAAACTACTGAGAGCTGCGATCACGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX753218       <-- GAAGGTTCGGATGATGATTACATGAAACTACTGAGAGCTGCGATCACGTG  Raphanus raphanistrum subsp. maritimus
FD945242       <-- GAAGGTTCGGATGATGATTACCTGAAACTACTGAGAGCTGCAATCACGTG  Raphanus sativus cv Early Scarlet Globe
EY936539       <-- GAAGGTTCGGATGATGATTACCTGAAACTACTGAGAGCTACAATCACGTG  Raphanus sativus cv Early Scarlet Globe
FD547111       <-- GAAGGTTCGGATGATGATTACATGAAACTACTGAGAGCTGCGATCACGTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX891825       <-- GAAGGTTCGGATGATGATTACCTGAAACTACTGAGAGCTGCAATCACTTG  Raphanus sativus var. oleiformis
FD553518       <-- GAAGGTTCGGATGATGATTACCTGAAACTACTGAGAGCTGCGATCACGTG  Raphanus raphanistrum subsp. landra
EY918701       <-- GAAGGTTCGGATGATGATTACATGAAACTACTGAGAGCTGCGATCACGTG  Raphanus raphanistrum subsp. landra
EY934517       <-- GAAGGTTCGGATGATGATTACCTGAAACTACTGAGGGCTGCAATCACGTG  Raphanus sativus cv Early Scarlet Globe
FD975270       <-- GAAGGTTCGGATGATGATTACATGAAACTACTGAGAGCTGCGATCACGTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY896331       <-- GAAGGTTCGGATGATGATTACCTGAAACTACTGAGAGCTGCGATCACGTG  Raphanus raphanistrum subsp. maritimus
FD984696       <-- GAAGGTTCGGATGATGATTACCTGAAACTACTGAGAGCTGCGATCACGTG  Raphanus raphanistrum subsp. landra
EY917522       <-- GAAGGTTCGGATGATGATTACCTGAAACTACTGAGAGCTGCGATCACGTG  Raphanus raphanistrum subsp. landra
FD531606       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV544263       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD979177       --> -AA-GTTCGGATGATGATTACATGAAACTACTGAGAGCTGCGATCACGTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD982053       --> GA................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX764372       --> GA-GGT-CGGATGATGAT-ACATGAA-CTACTG.................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY915281       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY916205       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD536071       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY922807       --> ..................................................  Raphanus raphanistrum subsp. landra
EX764845       --> GAAGGTTCGGATGATGATTACCTGAAACTACTGAGAGCTGCGATCACTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW726259       --> GAAGGTTCGGATGATGATTACCTGAAACTACTGAGAGCTGCAATCACGTG  Raphanus sativus cv Early Scarlet Globe
EW726847       --> GAAGGTTCGGATGATGATTACCTGAAACTACTGAGAGCTGCAATCACGTG  Raphanus sativus cv Early Scarlet Globe
FD988844       --> GAAGGTTCGGATGATGATTACCTGAAACTACTGAGAGCTGCGATCACGTG  Raphanus raphanistrum subsp. landra
EY913643       --> GAAGGTTCGGATGATGATTACCTGAAACTACTGAGAGCTGCGATCACTTG  Raphanus raphanistrum subsp. raphanistrum (NY)

               801    -    851
UN13445        --> TTTGACATACCCTGAGAAGCATTTTGAGAAGGTTCTGCGTCTAGCCATCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX753218       <-- TTTGACATACCCTGAGAAGCATTTTGAGAAGGTTCTGCGTCTAGCCATCA  Raphanus raphanistrum subsp. maritimus
FD945242       <-- TTTGACGTACCCTGAGAAGCATTTTGAGAAGGTTCTGCGTCTAGCCATCA  Raphanus sativus cv Early Scarlet Globe
EY936539       <-- TTTGACGTACCCTGAGAAGCATTTTGAGAAGGTTCTGCGTCTAGCCATCA  Raphanus sativus cv Early Scarlet Globe
FD547111       <-- TTTGACATACCCTGAGAAGCATTTTGAGAAGGTTTTGCGTCTAGCCATCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX891825       <-- TTTGACGTACCCTGAGAAGCATTTTGAGAAGGTTCTGCGTCTAGCCATCA  Raphanus sativus var. oleiformis
FD553518       <-- TTTGACATACCCTGAGAAGCATTTTGAGAAGGTTCTGCGTCTAGCCATCA  Raphanus raphanistrum subsp. landra
EY918701       <-- TTTGACATACCCTGAGAAGCATTTTGAGAAGGTTCTGCGTCTAGCCATCA  Raphanus raphanistrum subsp. landra
EY934517       <-- TTTGACGTACCCTGAGAAGCATTTTGAGAAGGTTCTGCGTCTAGCCATCA  Raphanus sativus cv Early Scarlet Globe
FD975270       <-- TTTGACATACCCTGAGAAGCATTTTGAGAAGGTTTTGCGTCTAGCCATCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY896331       <-- TTTGACATACCCTGAGAAGCATTTTGAGAAGGTTCTGCGTCTAGCCATCA  Raphanus raphanistrum subsp. maritimus
FD984696       <-- TTTGACATACCCTGAGAAGCATTTTGAGAAGGTTCTGCGTCTAGCCATCA  Raphanus raphanistrum subsp. landra
EY917522       <-- TTTGACATACCCTGAGAAGCATTTTGAGAAGGTTCTGCGTCTAGCCATCA  Raphanus raphanistrum subsp. landra
FD531606       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV544263       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD979177       --> TTTGACA...........................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD982053       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX764372       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY915281       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY916205       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD536071       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY922807       --> ..................................................  Raphanus raphanistrum subsp. landra
EX764845       --> TTTGACGTACCCTGAGAAGCATTTTGAGAAGGTGTTGCGTCTAGCCATCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW726259       --> TTTGACGTACCCTGAGAAGCATTTTGAGAAGGTTCTGCGTCTAGCCATCA  Raphanus sativus cv Early Scarlet Globe
EW726847       --> TTTGACGTACCCTGAGAAGCATTTTGAGAAGGTTCTGCGTCTAGCCATCA  Raphanus sativus cv Early Scarlet Globe
FD988844       --> TTTGACATACCCTGAGAAGCATTTTGAGAAGGTTCTGCGTCTAGCCATCA  Raphanus raphanistrum subsp. landra
EY913643       --> TTTGACGTACCCTGAGAAGCATTTTGAGAAGGTGTTGCGTCTAGCCATCA  Raphanus raphanistrum subsp. raphanistrum (NY)

               851    -    901
UN13445        --> ACAAAATGGGAACCGACGAGTGGGGACTAACCAGAGTTGTGACAACGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX753218       <-- ACAAAATGGGAACCGACGAGTGGGGACTAACCAGAGTTGTGACAACGAGA
FD945242       <-- ACAAAATGGGAACCGACGAGTGGGGACTAACCAGAGTTGTGACAACGAGA
EY936539       <-- ACAAAATGGGAACCGACGAGTGGGGACTAACCAGAGTTGTGACAACGAGA
FD547111       <-- ACAAAATGGGAACCGACGAGTGGGGACTAACCAGAGTTGTGACAACGAGA
EX891825       <-- ACAAAATGGGAACTGACGAGTGGGGACTGACCAGAGTCGTGACAACGAGA
FD553518       <-- ACAAAATGGGAACTGACGAGTGGGGACTAACCAGAGTCGTGACTACGAGA
EY918701       <-- ACAAAATGGGAACCGACGAGTGGGGACTAACCAGAGTTGTGACAACGAGA
EY934517       <-- ACAAAATGGGAACCGACGAGTGGGGACTAACCAGAGTTGTGACAACGAGA
FD975270       <-- ACAAAATGGGAACCGACGAGTGGGGACTAACCAGAGTTGTGACAACGAGA
EY896331       <-- ACAAAATGGGAACTGACGAGTGGGGACTGACCAGAGTCGTGACAACGAGA
FD984696       <-- ACAAAATGGGAACTGACGAGTGGGGACTAACCAGAGTCGTGACTACGAGA
EY917522       <-- ACAAAATGGGAACTGACGAGTGGGGACTAACCAGAGTCGTGACTACGAGA
FD531606       <-- ..................................................
EV544263       <-- ..................................................
FD979177       --> ..................................................
FD982053       --> ..................................................
EX764372       --> ..................................................
EY915281       --> ..................................................
EY916205       --> ..................................................
FD536071       --> ..................................................
EY922807       --> ..................................................
EX764845       --> ACAAAATGGGAACCGACGAGTGGGGACTGACCAGAGTTGTGACTACGAGA
EW726259       --> ACAAAATGGGAACCGACGAGTGGGGACTAACCAGAGTTGTGACAACGAGA
EW726847       --> ACAAAATGGGAACCGACGAGTGGGGACTAACCAGAGTTGTGACAACGAGA
FD988844       --> ACAAAATGGGAACTGACGAGTGGGGACTAACCAGAGTCGTGACTACGAGA
EY913643       --> ACAAAATGGGAACCGACGAGTGGGGACTGACCAGAGTTGTGACTACGAGA

               901    -    951
UN13445        --> ACCGAAGTTGACATGGAACGCATCAAAGAGGAGTATCAGCGTAGGAACAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX753218       <-- ACCGAAGTTGACATGGAACGCATCAAAGAGGAGTATCAGCGTAGGAACAG
FD945242       <-- ACCGAAGTTGACATGGAACGCATCAAAGAGGAGTATCAGCGTAGGAACAG
EY936539       <-- ACCGAAGTTGACATGGAACGCATCAAAGAGGAGTATCAGCGTAGGAACAG
FD547111       <-- ACCGAAGTTGACATGGAACGCATCAAAGAGGAGTATCAGCGTAGGAACAG
EX891825       <-- ACTGAGGTTGACATGGAACGCATCAAAGAGGAGTATCAGCGTAGGAACAG
FD553518       <-- ACTGAAGTTGACATGGAACGCATCAAAGAGGAGTATCAGCGTAGGAACAG
EY918701       <-- ACCGAAGTTGACATGGAACGCATCAAAGAGGAGTATCAGCGTAGGAACAG
EY934517       <-- ACCGAAGTTGACATGGAACGCATCAAAGAGGAGTATCAGCGTAGGAACAG
FD975270       <-- ACCGAAGTTGACATGGAACGCATCAAAGGGGAGTATCAGCGTAGGAACAG
EY896331       <-- ACTGAAGTTGACATGGAACGCATCAAAGAGGAGTATCAGCGTAGGAACAG
FD984696       <-- ACTGAAGTTGACATGGAACGCATCAAAGAGGAGTATCAGCGTAGGAACAG
EY917522       <-- ACTGAAGTTGACATGGAACGCATCAAAGAGGAGTATCAGCGTAGGAACAG
FD531606       <-- ..................................................
EV544263       <-- ..................................................
FD979177       --> ..................................................
FD982053       --> ..................................................
EX764372       --> ..................................................
EY915281       --> ..................................................
EY916205       --> ..................................................
FD536071       --> ..................................................
EY922807       --> ..................................................
EX764845       --> ACCGAAGTTGACATGGAACGCATCAAAGAGGAGTATCAGC..........
EW726259       --> ACCGAAGTTGACATGGAACGCATCAAAGAGGAGTATCAGCGTAGGAACAG
EW726847       --> ACCGAAGTTGACATGGAACGCATCAAAGAGGAGTATCAGCGTAGGAACAG
FD988844       --> ACTGAAGTTGACATGGAACGCATCAAAGAGGAGTATCAGCGTAGGAACAG
EY913643       --> ACCGAAGTTGACATGGAACGCATCAAAGAGGAGTATCAGCGTAGGAACAG

               951    -   1001
UN13445        --> CGTTCCTTTGGACCGTGCCGTCGCCAAAGACACTTCTGGTGATTATGAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX753218       <-- CGTTCCTTTGGACCGTGCCGTCGCCAAAGACACTTCTGGTGATTATGAGG
FD945242       <-- CGTTCCTTTGGACCGTGCCGTCGCCAAAGACACTTCTGGTGATTATGAGG
EY936539       <-- CGTTCCTTTGGACCGTGCCGTCGCCAAAGACACTTCTGGTGATTATGAGG
FD547111       <-- CGTTCCTTTGGACCGTGCCGTCGCCAAAGACACTTCTGGTGATTATGAGG
EX891825       <-- CGTTCCTTTGGACCGTGCCGTCGCCAAAGACACTTCTGGTGATTATGAGG
FD553518       <-- CGTTCCTTTGGACCGTGCCGTCGCCAAAGACACTTCTGGTGATTATGAGG
EY918701       <-- CGTTCCTTTGGACCGTGCCGTCGCCAAAGACACTTCTGGTGATTATGAGG
EY934517       <-- CGTTCCTTTGGACCGTGCCGTCGCCAAAGACACTTCTGGTGATTATGAGG
FD975270       <-- CGTTCCTTTGGACCGTGCCGTCG-AAAAGACACTTCTGGTGATTATGAGG
EY896331       <-- CGTTCCTTTGGACCGTGCCGTCGCCAAAGACACTTCTGGTGATTATGAGG
FD984696       <-- CGTTCCTTTGGACCGTGCCGTCGCCAAAGACACTTCTGGTGATTATGAGG
EY917522       <-- CGTTCCTTTGGACCGTGCCGTCGCCAAAGACACTTCTGGTGATTATGAGG
FD531606       <-- ..................................................
EV544263       <-- ..................................................
FD979177       --> ..................................................
FD982053       --> ..................................................
EX764372       --> ..................................................
EY915281       --> ..................................................
EY916205       --> ..................................................
FD536071       --> ..................................................
EY922807       --> ..................................................
EX764845       --> ..................................................
EW726259       --> CGTTCCTTTGGACCGTGCCGTCGCCAAAGACACTTCTGGTGATTATGAGG
EW726847       --> CGTTCCTTTGGACCGTGCCGTCGCCAAAGACACTTCTGGTGATTATGAGG
FD988844       --> CGTTCCTTTGGACCGTGCCGTCGCCAAAGACACTTCTGGTGATTATGAGG
EY913643       --> CGTTCCTTTGGACCGTGCCGTCGCCAAAGACACTTCTGGTGATTATGAGG

               1001   -   1051
UN13445        --> ACATGCTTGTTGCTCTTCTCGGACATGGAGATGTCTGAATACTACTGATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX753218       <-- ACATGCTTGTTGCTCTTTTCGGACATGGAGATGTCTGAATAATACTGATT  Raphanus raphanistrum subsp. maritimus
FD945242       <-- ACATGCTTGTTGCTCTTCTCGGACATGGAGATGTCTGAATACT-CTGATT  Raphanus sativus cv Early Scarlet Globe
EY936539       <-- ACATGCTTGTTGCTCTTCTCGGACATGGAGATGTCTGAATACT-CTGATT  Raphanus sativus cv Early Scarlet Globe
FD547111       <-- ACATGCTTGTTGCTCTTCTCGGACATGGAGATGTCTGAATAGTACTGATT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX891825       <-- ACATGCTTGTTGCTCTTCTCGGACATGGAGATGTCTGAATAGTACTGATT  Raphanus sativus var. oleiformis
FD553518       <-- ACATGCTTGTTGCTCTTCTCGGACATGGAGATGTCTGAATAATACCGATT  Raphanus raphanistrum subsp. landra
EY918701       <-- ACATGCTTGTTGCTCTTCTCGGACATGGAGATGTCTGAATAATACTGATT  Raphanus raphanistrum subsp. landra
EY934517       <-- ACATGCTTGTTGCTCTTCTCGGACATGGAGATGTCTGAATACT-CTGATT  Raphanus sativus cv Early Scarlet Globe
FD975270       <-- ACATGCTTGTTGCTCTTTTCGGACATGGAGATGTCTGAATAGTACTGATT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY896331       <-- ACATGCTTGTTGCTCTTCTCGGACATGGAGATGTCTGAATAC--TT-ATT  Raphanus raphanistrum subsp. maritimus
FD984696       <-- ACATGCTTGTTGCTCTTCTCGGACATGGAGATGTCTGAATAATACTGATT  Raphanus raphanistrum subsp. landra
EY917522       <-- ACATGCTTGTTGCTCTTTTCGGACATGTAGATGTCTGAATAATACTGATT  Raphanus raphanistrum subsp. landra
FD531606       <-- ...................................TGAATAATACTGATT  Raphanus raphanistrum subsp. maritimus
EV544263       <-- ........................................aaTACTTATT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD979177       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD982053       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX764372       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY915281       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY916205       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD536071       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY922807       --> ..................................................  Raphanus raphanistrum subsp. landra
EX764845       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW726259       --> ACATGCTTGTTGCTCTTCTCGGACATGGAGATGTCTGAATACT-CTGATT  Raphanus sativus cv Early Scarlet Globe
EW726847       --> ACATGCTTGTTGCTCTTCTCGGACATGGAGATGTCTGAATACT-CTGATT  Raphanus sativus cv Early Scarlet Globe
FD988844       --> ACATGCTTGTTGCTCTTCTCGGACATGGAGATGTCTGAATAATACTGATT  Raphanus raphanistrum subsp. landra
EY913643       --> ACATGCTCGTTGCTCTTCTCGGACATGGAGATGTCTGAATACT--T-ATT  Raphanus raphanistrum subsp. raphanistrum (NY)

               1051   -   1101
UN13445        --> ATG-TTT-CCCTTTTGGTTTGTTTTGAATAATAA--AGAGTTGTGTGAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX753218       <-- ATG-TTT-CCCCTTTGGTTTGTTTTGAATAATAA--AGAGTTGTGc....  Raphanus raphanistrum subsp. maritimus
FD945242       <-- CTG-TTT-CCCTTTTGGTTTGTTTTGAATAATAATAAGAGTTGTGT....  Raphanus sativus cv Early Scarlet Globe
EY936539       <-- CTG-TTT-CCCTTTTGGTTTGTTTTGAATAATAATAAGAGTTGCGTGAAA  Raphanus sativus cv Early Scarlet Globe
FD547111       <-- ATG-TTT-CCCTTTTGGTTTGTTTTGAATAATAA--AGAGTTGTGTGAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX891825       <-- CTG-TTT-CCCTTTTGGTTTGTTTTGAATAATAA--AGAGTTGTGTGAAA  Raphanus sativus var. oleiformis
FD553518       <-- ATG-TTT-CCCTTTTGGTTTGTTTTGAATAATAA--AGAGTTGCGTGAAA  Raphanus raphanistrum subsp. landra
EY918701       <-- ATG-TTT-CCCTTTTGGTTTGTTTTGAATAATAA--AGAGTTGTGTGAAA  Raphanus raphanistrum subsp. landra
EY934517       <-- CTG-TTT-CCCTTTTGGTTTGTTTTGAATAATAATAAGAGTTGTGTGAAA  Raphanus sativus cv Early Scarlet Globe
FD975270       <-- ATG-TTT-CCCTTTTGGTTTGTTTTGAATAATAA--AGAGTTGTGTGAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY896331       <-- CTGTTTT-CCCTTTTGGTTTGTTTTGAATAATAA--AGAGTTGTGTGAAA  Raphanus raphanistrum subsp. maritimus
FD984696       <-- ATG-TTT-CCCTTTTGGTTTGTTTTGAATAATAA--AGAGTTGTGTGAAA  Raphanus raphanistrum subsp. landra
EY917522       <-- ATG-TTT-CCCTTTTGGTTTGTTTTGAATAATAA--GGAGTTGTGTGAAA  Raphanus raphanistrum subsp. landra
FD531606       <-- ATG-TTT-CCCTTTTGGTTTGTTTTGAATAATAA--AGAGTTGTGTGAAA  Raphanus raphanistrum subsp. maritimus
EV544263       <-- CTG-TTTTCCCTTTTGGTTTGTTTTGAATAATAA--AGAGTTGTGTGAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD979177       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD982053       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX764372       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY915281       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY916205       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD536071       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY922807       --> ..................................................  Raphanus raphanistrum subsp. landra
EX764845       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW726259       --> CTG-TTT-CCCTTTTGGTTTGTTTTGAATAATAATAAGAGTTGTGTGAAA  Raphanus sativus cv Early Scarlet Globe
EW726847       --> CTG-TTT-CCCTTTTGGTTTGTTTTGAATAATAATAAGAGTTGTGTGAAA  Raphanus sativus cv Early Scarlet Globe
FD988844       --> ATG-TTT-CCCTTTTGGTTTGTTTTGAATAATAA--AGAGTTGTGTGAAA  Raphanus raphanistrum subsp. landra
EY913643       --> CTGTTTT-CCCTTTTGGTTTGTTTTGAATAATAA--AGAGTTGTGTGAAA  Raphanus raphanistrum subsp. raphanistrum (NY)

               1101   -   1151
UN13445        --> CTTGTTCCCGCAAACTATGTTTACTTGAG-TGTGTGTTGAATTGAATCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX753218       <-- ..................................................
FD945242       <-- ..................................................
EY936539       <-- CTTGTTCCgc........................................
FD547111       <-- CTTGTTCCCGCAAACTATGTTTACTTGAG-TGTGTGTTGAATTGAATCAA
EX891825       <-- CTTGTTCCCGCAAACTATGTTTACTTGAG-TGTGTGTTGAATTGAATCAA
FD553518       <-- CTTGTTCCCGCAAACTATGTTTACTTGAG-TGTGTGTTGAATTGAATCAA
EY918701       <-- CTTGTTCCCcc.......................................
EY934517       <-- CTTGTTCC-GCAAACTATGTTTACTTGAGATGTGTGTTGAATTGAATCAA
FD975270       <-- CTTGTTCCCGCAAACTATGTTTACTTGAG-TGTGTGTTGAATTGAATCAA
EY896331       <-- CTTGTTCCCGCAAACTATGTTTACTTGAG-TGTGTGTTGAATTGAATCAA
FD984696       <-- CTTGTTCCCGCAAACTATGTTTACTTGAG-TGTGTGTTGAATTGAATCAA
EY917522       <-- CTTGTTCCCGCAAACTATGTTTACTTGAG-TGTGTGTTGAATTGAATCAA
FD531606       <-- CTTGTTCCCCCAAACTATGTTTACTTGAG-TGTGTGTTGAATTGAATCAA
EV544263       <-- CTTGTTCCCCCAAACTATGTTTACTTGAG-TGTGTGTTGAATTGAATTAA
FD979177       --> ..................................................
FD982053       --> ..................................................
EX764372       --> ..................................................
EY915281       --> ..................................................
EY916205       --> ..................................................
FD536071       --> ..................................................
EY922807       --> ..................................................
EX764845       --> ..................................................
EW726259       --> CTTGTTCC-GCAAACTATGTTTACTTGAGatgtg................
EW726847       --> CTTGTTCC-GC-AACTATGTTTACTTGAGATGTGTGTTGAATT.......
FD988844       --> CTTGTTCCCGCAAACTATGTTTACTTGAG-TGTGTGTTGAATTGAATCAA
EY913643       --> CTTGTTCCCGCAAACTATGTTTACTTGAG-TGTGTGTTGAATTGAATTAA

               1151   -   1201
UN13445        --> AAAAACTGTTTTTCCT....
                   ~~~~~~~~~~~~~~~~~~~~
EX753218       <-- ....................
FD945242       <-- ....................
EY936539       <-- ....................
FD547111       <-- AAAAACTGTTTTTCt.....
EX891825       <-- AAAA-CTGTTTTTCCT....
FD553518       <-- AAAAACTGTTTTTCtt....
EY918701       <-- ....................
EY934517       <-- AAAAACTGTTTTTCtt....
FD975270       <-- AAAAACTGTTTTTCCT....
EY896331       <-- AAAA-CTGTTTTTCttacgg
FD984696       <-- AAAAACTGTTTTTCtt....
EY917522       <-- AAAAACTGTTTTTCtc....
FD531606       <-- AAAAACTGTTTTTttt....
EV544263       <-- AAAAACTGTTTTTttt....
FD979177       --> ....................
FD982053       --> ....................
EX764372       --> ....................
EY915281       --> ....................
EY916205       --> ....................
FD536071       --> ....................
EY922807       --> ....................
EX764845       --> ....................
EW726259       --> ....................
EW726847       --> ....................
FD988844       --> AAAA-CTGTTTTTCtt....
EY913643       --> AAAAACTGTTTTTCtt....