RadishBase

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Alignment for radish unigene UN13451

               1      -     51
UN13451        --> GGAATAAAAGTGAACCCTTTAGCTTAGACTGCTTCACTTCCATAGTCTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530511       <-- .................................ggACTTCCATAGTCTCT
EV574345       <-- .......................................ggATAGTCTCT
EY895964       <-- ..................................................
EV547203       <-- ..................................................
EY918586       <-- ..................................................
EW729186       <-- ..................................................
FD976496       <-- ..................................................
EY911982       <-- ..................................................
FD554095       <-- ..................................................
EV544484       <-- ..................................................
EX777346       <-- ..................................................
FD982779       <-- ..................................................
FD545674       <-- ..................................................
EY920115       <-- ..................................................
FD977892       <-- ..................................................
FD983785       <-- ..................................................
FD935690       <-- ..................................................
EY936199       <-- ..................................................
EY924471       --> GGAATAAAAGTGAACCCTTTAGCTTAGACTGCTTCACTTCCATAGTCTCT
EV552256       --> ...............................ggTCACTTCCATAGTCTCT
EV525888       --> .................................ggACTTCCATAGTCTCT
EW724743       --> .................................ggACTTCCATAGTCTCT
EY900417       --> .................................ggACTTCCATAGTCTCT
FD549635       --> .................................ggACTTCCATAGTCTCT
FD980636       --> ................................gggACTTCCATAGTCTCT
FD982304       --> .................................ggACTTCCATAGTCTCT
EV569919       --> .......................................ggATAGTCTCT
EY922659       --> .......................................ggATAGTCTCT
EY940442       --> .......................................ggATAGTCTCT
FD570643       --> .......................................ggATAGTCTCT
EX762102       --> ..................................................
EX773547       --> ..................................................
EY916281       --> ..................................................
FD939611       --> ..................................................
FD939843       --> ..................................................
EV548892       --> ..................................................
FD558140       --> ..................................................
FD986538       --> ..................................................

               51     -    101
UN13451        --> TTTCTAGGGTTTTAAGGTTTCCGCACCGTTTCACGAATCCTCACTACACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530511       <-- TTTCTAGGGTTTTAAGGTTTCCGCACCGTTTCACGAATCCTCACTACACG
EV574345       <-- TTTCTAGGGTTTTAAGGTTTCCGCACCGTTTCACGAATCCTCACTACACG
EY895964       <-- ..............AGGTTTCCGCACCGTTTCACGA-TCCTCACTACACG
EV547203       <-- ..................TTCCGCACCGTTTCACGAATCCTCACTACACG
EY918586       <-- ..............................TCACGAATCCTCACTACACG
EW729186       <-- .....................................TCCTCACTACACG
FD976496       <-- ..................................................
EY911982       <-- ..................................................
FD554095       <-- ..................................................
EV544484       <-- ..................................................
EX777346       <-- ..................................................
FD982779       <-- ..................................................
FD545674       <-- ..................................................
EY920115       <-- ..................................................
FD977892       <-- ..................................................
FD983785       <-- ..................................................
FD935690       <-- ..................................................
EY936199       <-- ..................................................
EY924471       --> TTTCTAGGGTTTTAAGGTTTCCGCACCGTTTCACGAATCCTCACTACACG
EV552256       --> TTTCTAGGGTTTTAAGGTTTCCGCACCGTTTCACGAATCCTCACTACACG
EV525888       --> TTTCTAGGGTTTTAAGGTTTCCGCACCGTTTCACGAATCCTCACTACACG
EW724743       --> TTTCTAGGGTTTTAAGGTTTCCGCACCGTTTCACGAATCCTCACTACACG
EY900417       --> TTTCTAGGGTTTTAAGGTTTCCGCACCGTTTCACGAATCCTCACTACACG
FD549635       --> TTTCTAGGGTTTTAAGGTTTCCGCACCGTTTCACGAATCCTCACTACACG
FD980636       --> TTTCTAGGGTTTTAAGGTTTCCGCACCGTTTCACGAATCCTCACTACACG
FD982304       --> TTTCTAGGGTTT-AAGGTTTCCGCACCGTTTCACGAATCCTCACTACACG
EV569919       --> TTTCTAGGGTTTTAAGGTTTCCGCACCGTTTCACGAATCCTCACTACACG
EY922659       --> TTTCTAGGGTTTTAAGGTTTCCGCACCGTTTCACGAATCCTCACTACACG
EY940442       --> TTTCTAGGGTTTTAAGGTTTCCGCACCGTTTCACGAATCCTCACTACACG
FD570643       --> TTTCTAGGGTTTTAAGGTTTCCGCACCGTTTCACGAATCCTCACTACACG
EX762102       --> .ggCTAGTGTTTTAAGGTTTCCGCACCGTTTCACGAATCCTCACTACACG
EX773547       --> ...............GGTTTCCGCACCGTTTCACGAATCCTCACTACACG
EY916281       --> ..................TTCCGCACCGTTTCACGAATCCTCACTACACG
FD939611       --> ..................TTCCGCACCGTTTCACGAATCCTCACTACACG
FD939843       --> ..................TTCCGCACCGTTTCACGAATCCTCACTACACG
EV548892       --> ........................................ggACTACACG
FD558140       --> ........................................ggACTACACG
FD986538       --> ..................................................

               101    -    151
UN13451        --> TAATCATTCATCATGACTACCGAAGACAAAGAGATCCTCGCCGCCAAATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530511       <-- TAATCATTCATCATGACTACCGAAGACAAAGAGATCCTCGCCGCCAAATT
EV574345       <-- TAATCATTCATCATGACTACCGAAGAGAAAGAGATCCTCGCCGCCAAATT
EY895964       <-- TAATCATTCATCATGACTACCGAAGACAAAGAGATCCTCGCCGCCAAATT
EV547203       <-- TAATCATTCATCATGACTACCGAAGAGAAAGAGATCCTCACCGCCAAACT
EY918586       <-- TAATCATTCATCATGACTACCGAAGACAAAGAGATCCTCGCCGCCAAATT
EW729186       <-- TAATCATTCATCATGACTACCGAAGACAAAGAGATCCTCGCCGCCAAATT
FD976496       <-- ......TTCATCATGACTACCGAAGAGAAAGAGATCCTCGCCGCCAAATT
EY911982       <-- ...........CATGACTACCGAAGAGAAAGAGATCCTCGCCGCCAAATT
FD554095       <-- ......................AAGACAAAGAGATCCTCGCCGCCAAATT
EV544484       <-- .........................ACAAAGAGATCCTCGCCGCCAAATT
EX777346       <-- .................................................T
FD982779       <-- ..................................................
FD545674       <-- ..................................................
EY920115       <-- ..................................................
FD977892       <-- ..................................................
FD983785       <-- ..................................................
FD935690       <-- ..................................................
EY936199       <-- ..................................................
EY924471       --> TAATCATTCATCATGACTACCGAAGACAAAGAGATCCTCGCCGCCAAATT
EV552256       --> TAATCATTCATCATGACTACCGAAGAGAAAGAGATCCTCACCGCCAAACT
EV525888       --> TAATCATTCATCATGACTACCGAAGACAAAGAGATCCTCGCCGCCAAATT
EW724743       --> TAATCATTCATCATGACTACCGAAGACAAAGAGATCCTCGCCGCCAAATT
EY900417       --> TAATCATTCATCATGACTACCGAAGACAAAGAGATCCTCGCCGCCAAATT
FD549635       --> TAATCATTCATCATGACTACCGAAGACAAAGAGATCCTCGCCGCCAAATT
FD980636       --> TAATCATTCATCATGACTACCGAAGAGAAAGAGATCCTCGCCGCCAAATT
FD982304       --> TAATCATTCATCATGACTACCGAAGACAAAGAGATCCTCGCCGCCAAATT
EV569919       --> TAATCATTCATCATGACTACCGAAGAGAAAGAGATCCTCGCCGCCAAATT
EY922659       --> TAATCATTCATCATGACTACCGAAGACAAAGAGATCCTCGCCGCCAAATT
EY940442       --> TAATCATTCATCATGACTACCGAAGACAAAGAGATCCTCGCCGCCAAATT
FD570643       --> TAATCATTCATCATGACTACCGAAGACAAAGAGATCCTCGCCGCCAAATT
EX762102       --> TAATCATTCATCATGACTACCGAAGACAAAGAGATCCTCGCCGCCAAATT
EX773547       --> TAATCATTCATCATGACTACCGAAGACAAAGAGATCCTCGCCGCCAAATT
EY916281       --> TAATCATTCATCATGACTACCGAAGAGAAAGAGATCCTCGCCGCCAAATT
FD939611       --> TAATCATTCATCATGACTACCGAAGACAAAGAGATCCTCGCCGCCAAATT
FD939843       --> TAATCATTCATCATGACTACCGAAGACAAAGAGATCCTCGCCGCCAAATT
EV548892       --> TAAT-ATTCATCATGACTACCGAAGACAAAGAGATCCTCGCCGCCAAATT
FD558140       --> TAATCATTCATCATGACTACCGAAGACAAAGAGATCCTCGCCGCCAAATT
FD986538       --> .............gGACTACCGAAGACAAAGAGATCCTCGCCGCCAAATT

               151    -    201
UN13451        --> GGAAGAGCAGAAGATCGATCTTGATAAGCCTGAAGTTGAGGACGTTGATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530511       <-- GGAAGAGCAGAAGATCGATCTTGATAAGCCTGAAGTTGAGGACGTTGATG
EV574345       <-- GGAAGAGCAGAAGATCGATCTTGATAAGCCTGAAGTTGAGGACGTTGATG
EY895964       <-- GGAAGAGCAGAAGATCGATCTTGATAAGCCTGAAGTTGAGGACGTTGATG
EV547203       <-- GGAAGAGCAGAAGATCGATCTTGATAAGCCTGAAGTTGAGGACGTTGATG
EY918586       <-- GGAAGAGCAGAAGATCGATCTTGATAAGCCTGAAGTTGAGGACGTTGATG
EW729186       <-- GGAAGAGCAGAAGATCGATCTTGATAAGCCTGAAGTTGAGGACGTTGATG
FD976496       <-- GGAAGAGCAGAAGATCGATCTTGATAAGCCTGAAGTTGAGGACGTTGATG
EY911982       <-- GGAAGAGCAGAAGATCGATCTTGATAAGCCTGAAGTTGAGGACGTTGATG
FD554095       <-- GGAAGAGCAGAAGATCGATCTTGATAAGCCTGAAGTTGAGGACGTTGATG
EV544484       <-- GGAAGAGCAGAAGATCGATCTTGATAAGCCTGAAGTTGAGGACGTTGATG
EX777346       <-- GGAAGAGCAGAAGATCGATCTTGATAAGCC-GAAGTTGAGGACGTTGATG
FD982779       <-- ..........AAGATCGATCTTGATAAGCC-GAAGTTGAGGACGTTGATG
FD545674       <-- .................................AGTTGAGGACGTTGATG
EY920115       <-- ..................................GTTGAGGACGTTGATG
FD977892       <-- .....................................GAGGACGTTGATG
FD983785       <-- ..................................................
FD935690       <-- ..................................................
EY936199       <-- ..................................................
EY924471       --> GGAAGAGCAGAAGATCGATCTTGATAAGCCTGAAGTTGAGGACGTTGATG
EV552256       --> GGAAGAGCAGAAGATCGATCTTGATAAGCCTGAAGTTGAGGACGTTGATG
EV525888       --> GGAAGAGCAGAAGATCGATCTTGATAAGCCTGAAGTTGAGGACGTTGATG
EW724743       --> GGAAGAGCAGAAGATCGATCTTGATAAGCCTGAAGTTGAGGACGTTGATG
EY900417       --> GGAAGAGCAGAAGATCGATCTTGATAAGCCTGAAGTTGAGGACGTTGATG
FD549635       --> GGAAGAGCAGAAGGTCGATCTTGATAAGCCTGAAGTTGAGGACGTTGATG
FD980636       --> GGAAGAGCAGAAGATCGATCTTGATAAGCCTGAAGTTGAGGACGTTGATG
FD982304       --> GGAAGAGCAGAAGATCGATCTTGATAAGCCTGAAGTTGAGGACGTTGATG
EV569919       --> GGAAGAGCAGAAGATCGATCTTGATAAGCCTGAAGTTGAGGACGTTGATG
EY922659       --> GGAAGAGCAGAAGATCGATCTTGATAAGCCTGAAGTTGAGGACGTTGATG
EY940442       --> GGAAGAGCAGAAGATCGATCTTGATAAGCCTGAAGTTGAGGACGTTGATG
FD570643       --> GGAAGAGCAGAAGATCGATCTTGATAAGCCTGAAGTTGAGGACGTTGATG
EX762102       --> GGAAGAGCAGAAGATCGATCTTGATAAGCCTGAAGTTGAGGACGTTGATG
EX773547       --> GGAAGAGCAGAAGATCGATCTTGATAAGCCTGAAGTTGAGGACGTTGATG
EY916281       --> GGAAGAGCAGAAGATCGATCTTGATAAGCCTGAAGTTGAGGACGTTGATG
FD939611       --> GGAAGAGCAGAAGATCGATCTTGATAAGCCTGAAGTTGAGGACGTTGATG
FD939843       --> GGAAGAGCAGAAGATCGATCTTGATAAGCCTGAAGTTGAGGACGTTGATG
EV548892       --> GGAAGAGCAGAAGATCGATCTTGATAAGCCTGAAGTTGAGGACGTTGATG
FD558140       --> GGAAGAGCAGAAGATCGATCTTGATAAGCCTGAAGTTGAGGACGTTGATG
FD986538       --> GGAAGAGCAGAAGATCGATCTTGATAAGCCTGAAGTTGAGGACGTTGATG

               201    -    251
UN13451        --> ACAACGATGATGATGACTCCGAAGACGATGATAATGATGATGATGCAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530511       <-- ACAACGATGATGATGACTCCGAAGACGATGATAATGATGATGATGCAGAG
EV574345       <-- ACAACGATGATGATGACTCCGAAGACGATGATAATGATGATGATGCAGAG
EY895964       <-- ACAACGATGATGATGACTCCGAAGACGATGATAATGATGATGATGCAGAG
EV547203       <-- ACAACGATGATGATGACTCCGAAGACGATGATAATGATGATGATGCAGAG
EY918586       <-- ACAACGATGATGATGACTCCGAAGACGATGATAATGATGATGATGCAGAG
EW729186       <-- ACAACGATGATGATGACTCCGAAGACGATGATAATGATGATGATGCAGAG
FD976496       <-- ACAACGATGATGATGACTCCGAAGACGATGATAATGATGATGATGCAGAG
EY911982       <-- ACAACGATGATGATGACTCCGAAGACGATGATAATGATGATGATGCAGAG
FD554095       <-- ACAACGATGATGATGACTCCGAAGACGATGATAATGATGATGATGCAGAG
EV544484       <-- ACAACGATGATGATGACTCCGAAGACGATGATAATGATGATGATGCAGAG
EX777346       <-- ACAACGATGATGATGACTCCGAAGACGATGATAATGATGATGATGCAGAG
FD982779       <-- ACAACGATGATGATGACTCCGAAGACGATGATAATGATGATGATGCAGAG
FD545674       <-- ACAACGATGATGACGACTCCGAAGACGATGATAATGATGATGATGCAGAG
EY920115       <-- ACAACGATGATGATGACTCCGAAGACGATGATAATGATGATGATGCAGAG
FD977892       <-- ACAACGATGATGATGACTCCGAAGACGATGATAATGATGATGATGCAGAG
FD983785       <-- ..............GACTCCGAAGACGATGATAATGATGATGATGCAGAG
FD935690       <-- ..................................................
EY936199       <-- ..................................................
EY924471       --> ACAACGATGATGATGACTCCGAAGACGATGATAATGATGATGATGCAGAG
EV552256       --> ACAACGATGATGATGACTCCGAAGACGATGATAATGATGATGATGCAGAG
EV525888       --> ACAACGATGATGATGACTCCGAAGACGATGATAATGATGATGATGCAGAG
EW724743       --> ACAACGATGATGATGACTCCGAAGACGATGATAATGATGATGATGCAGAG
EY900417       --> ACAACGATGATGATGACTCCGAAGACGATGATAATGATGATGATGCAGAG
FD549635       --> ACAACGATGATGACGACTCCGAAGACGATGATAATGATGATGATGCAGAG
FD980636       --> ACAACGATGATGATGACTCCGAAGACGATGATAATGATGATGATGCAGAG
FD982304       --> ACAACGATGATGATGACTCCGAAGACGATGATAATGATGATGATGCAGAG
EV569919       --> ACAACGATGATGATGACTCCGAAGACGATGATAATGATGATGATGCAGAG
EY922659       --> ACAACGATGATGATGACTCCGAAGACGATGATAATGATGATGATGCAGAG
EY940442       --> ACAACGATGATGATGACTCCGAAGACGATGATAATGATGATGATGCAGAG
FD570643       --> ACAACGATGATGATGACTCCGAAGACGATGATAATGATGATGATGCAGAG
EX762102       --> ACAACGATGATGATGACTCCGAAGACGATGATAATGATGATGATGCAGAG
EX773547       --> ACAACGATGATGATGACTCCGAAGACGATGATAATGATGATGATGCAGAG
EY916281       --> ACAACGATGATGATGACTCCGAAGACGATGATAATGATGATGATGCAGAG
FD939611       --> ACAACGATGATGATGACTCCGAAGACGATGATAATGATGATGATGCAGAG
FD939843       --> ACAACGATGATGATGACTCCGAAGACGATGATAATGATGATGATGCAGAG
EV548892       --> ACAACGATGATGATGACTCCGAAGACGATGATAATGATGATGATGCAGAG
FD558140       --> ACAACGATGATGATGACTCCGAAGACGATGATAATGATGATGATGCAGAG
FD986538       --> ACAACGATGATGATGACTCCGAAGACGATGATAATGATGATGATGCAGAG

               251    -    301
UN13451        --> GGACAAGAGGGAGGCAAGTCAAAACAAAGCAGAAGTGAGAAGAAGAGTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530511       <-- GGACAAGAGGGAGGCAAGTCAAAACAAAGCAGAAGTGAGAAGAAGAGTCG
EV574345       <-- GGACAAGAGGGAGGCAAGTCAAAACAAAGCAGAAGTGAGAAGAAGAGTCG
EY895964       <-- GGACAAGAGGGAGGCAAGTCAAAACAAAGCAGAAGTGAGAAGAAGAGTCG
EV547203       <-- GGACAAGAGGGAGGCAAGTCAAAACAAAGCAGAAGTGAGAAGAAGAGTCG
EY918586       <-- GGGCAAGAGGGAGGCAAGTCAAAACAAAGCAGAAGTGAGAAGAAGAGTCG
EW729186       <-- GGACAAGAGGGAGGCAAGTCAAAACAAAGCAGAAGTGAGAAGAAGAGTCG
FD976496       <-- GGACAAGAGGGAGGCAAGTCAAAACAAAGCAGAAGTGAGAAGAAGAGTCG
EY911982       <-- GGACAAGAGGGAGGCAAGTCAAAACAAAGCAGAAGTGAGAAGAAGAGTCG
FD554095       <-- GGGCAAGAGGGAGGCAAGTCAAAACAAAGCAGAAGTGAGAAGAAGAGTCG
EV544484       <-- GGACAAGAGGGAGGCAAGTCAAAACAAAGCAGAAGTGAGAAGAAGAGTCG
EX777346       <-- GGGCAAGAGGGAGGCAAGTCAAAACAAAGCAGAAGTGAGAAGAAGAGTCG
FD982779       <-- GGGCAAGAGGGAGGCAAGTCAAAACAAAGCAGAAGTGAGAAGAAGAGTCG
FD545674       <-- GGACAAGAGGGAGGCAAGTCAAAACAAAGCAGAAGTGAGAAGAAGAGTCG
EY920115       <-- GGGCAAGAGGGAGGCAAGTCAAAACAAAGCAGAAGTGAGAAGAAGAGTCG
FD977892       <-- GGACAAGAGGGAGGCAAGTCAAAACAAAGCAGAAGTGAGAAGAAGAGTCG
FD983785       <-- GGACAAGAGGGAGGCAAGTCAAAACAAAGCAGAAGTGAGAAGAAGAGTCG
FD935690       <-- ..............CAAGTCAAAACAAAGCAGAAGTGAGAAGAAGAGTCG
EY936199       <-- .......................ACAAAGCAGAAGTGAGAAGAAGAGTCG
EY924471       --> GGGCAAGAGGGAGGCAAGTCAAAACAAAGCAGAAGTGAGAAGAAGAGTCG
EV552256       --> GGACAAGAGGGAGGCAAGTCAAAACAAAGCAGAAGTGAGAAGAAGAGTCG
EV525888       --> GGACAAGAGGGAGGCAAGTCAAAACAAAGCAGAAGTGAGAAGAAGAGTCG
EW724743       --> GGACAAGAGGGAGGCAAGTCAAAACAAAGCAGAAGTGAGAAGAAGAGTCG
EY900417       --> GGACAAGAGGGAGGCAAGTCAAAACAAAGCAGAAGTGAGAAGAAGAGTCG
FD549635       --> GGACAAGAGGGAGGCAAGTCAAAACAAAGCAGAAGTGAGAAGAAGAGTCG
FD980636       --> GGACAAGAGGGAGGCAAGTCAAAACAAAGCAGAAGTGAGAAGAAGAGTCG
FD982304       --> GGACAAGAGGGAGGCAAGTCAAAACAAAGCAGAAGTGAGAAGAAGAGTCG
EV569919       --> GGACAAGAGGGAGGCAAGTCAAAACAAAGCAGAAGTGAGAAGAAGAGTCG
EY922659       --> GGGCAAGAGGGAGGCAAGTCAAAACAAAGCAGAAGTGAGAAGAAGAGTCG
EY940442       --> GGACAAGAGGGAGGCAAGTCAAAACAAAGCAGAAGTGAGAAGAAGAGTCG
FD570643       --> GGACAAGAGGGAGGCAAGTCAAAACAAAGCAGAAGTGAGAAGAAGAGTCG
EX762102       --> GGACAAGAGGGAGGCAAGTCAAAACAAAGCAGAAGTGAGAAGAAGAGTCG
EX773547       --> GGGCAAGAGGGAGGCAAGTCAAAACAAA......................
EY916281       --> GGACAAGAGGGAGGCAAGTCAAAACAAAGCAGAAGTGAGAAGAAGAGTCG
FD939611       --> GGACAAGAGGGAGGCAAGTCAAAACAAAGCAGAAGTGAGAAGAAGAGTCG
FD939843       --> GGACAAGAGGGAGGCAAGTCAAAACAAAGCAGAAGTGAGAAGAAGAGTCG
EV548892       --> GGACAAGAGGGAGGCAAGTCAAAACAAAGCAGAAGTGAGAAGAAGAGTCG
FD558140       --> GGGCAAGAGGGAGGCAAGTCAAAACAAAGCAGAAGTGAGAAGAAGAGTCG
FD986538       --> GGGCAAGAGGGAGGCAAGTCAAAACAAAGCAGAAGTGAGAAGAAGAGTCG

               301    -    351
UN13451        --> CAAAGCCATGCTCAAGCTTGGGATGAAACCTATCACTGGTGTCAGCCGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530511       <-- CAAAGCCATGCTCAAGCTTGGGATGAAACCTATCACTGGTGTCAGCCGTG  Raphanus raphanistrum subsp. maritimus
EV574345       <-- CAAAGCCATGCTCAAGCTTGGGATGAAACCTATCACTGGTGTCAGCCGTG  Raphanus raphanistrum subsp. landra
EY895964       <-- CAAAGCCATGCTCAAGCTTGGGATGAAACCTATCACTGGTGTCAGCCGTG  Raphanus raphanistrum subsp. maritimus
EV547203       <-- CAAAGCCATGCTCAAGCTTGGGATGAAACCTATCACTGGTGTCAGCCGTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY918586       <-- CAAAGCCATGCTCAAGCTTGGGATGAAACCTATCACTGGTGTCAGCCGTG  Raphanus raphanistrum subsp. landra
EW729186       <-- CAAAGCCATGCTGAAGCTTGGGATGAAACCTATCACTGGTGTCAGCCGTG  Raphanus sativus cv Early Scarlet Globe
FD976496       <-- CAAAGCCATGCTCAAGCTTGGGATGAAACCTATCACTGGTGTCAGCCGTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY911982       <-- CAAAGCCATGCTCAAGCTTGGGATGAAACCTATCACTGGTGTCAGCCGTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD554095       <-- CAAAGCCATGCTCAAGCTTGGGATGAAACCTATCACTGGTGTCAGCCGTG  Raphanus raphanistrum subsp. landra
EV544484       <-- CAAAGCCATGCTCAAGCTTGGGATGAAACCTATCACTGGTGTCAGCCGTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX777346       <-- CAAAGCCATGCTCAAGCTTGGGATGAAACCTATCACTGGTGTCAGCCGTG  Raphanus raphanistrum subsp. landra
FD982779       <-- CAAAGCCATGCTCAAGCTTGGGATGAAACCTATCACTGGTGTCAGCCGTG  Raphanus raphanistrum subsp. landra
FD545674       <-- CAAAGCCATGCTCAAGCTTGGGATGAAACCTATCACTGGTGTCAGCCGTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY920115       <-- CAAAGCCATGCTCAAGCTTGGGATGAAACCTATCACTGGTGTCAGCCGTG  Raphanus raphanistrum subsp. landra
FD977892       <-- CAAAGCCATGCTCAAGCTTGGGATGAAACCTATCACTGGTGTCAGCCGTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD983785       <-- CAAAGCCATGCTCAAGCTTGGGATGAAACCTATCACTGGTGTCAGCCGTG  Raphanus raphanistrum subsp. landra
FD935690       <-- CAAAGCCATGCTGAAGCTTGGGATGAAACCTATCACTGGTGTCAGCCGTG  Raphanus sativus var. oleiformis
EY936199       <-- CAAAGCCATGCTGAAGCTTGGGATGAAACCTATCACTGGTGTCAGCCGTG  Raphanus sativus cv Early Scarlet Globe
EY924471       --> CAAAGCCATGCTCAAGCTTGGGATGAAACCTATCACTGGTGTCAGCCGTG  Raphanus raphanistrum subsp. landra
EV552256       --> CAAAGCCATGCTCAAGCTTGGGATGAAACCTATCACTGGTGTCAGCCGTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV525888       --> CAAAGCCATGCTCAAGCTTGGGATGAAACCTATCACTGGTGTCAGCCGTG  Raphanus raphanistrum subsp. maritimus
EW724743       --> CAAAGCCATGCTGAAGCTTGGGATGAAACCTATCACTGGTGTCAGCCGTG  Raphanus sativus cv Early Scarlet Globe
EY900417       --> CAAAGCCATGCTCAAGCTTGGGATGAAACCTATCACTGGTGTCAGCCGTG  Raphanus raphanistrum subsp. maritimus
FD549635       --> CAAAGCCATGCTCAAGCTTGGGATGAAACCTATCACTGGTGTCAGCCGTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD980636       --> CAAAGCCATGCTCAAGCTTGGGATGAAACCTATCACTGGTGTCAGCCGTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD982304       --> CAAAGCCATGCTCAAGCTTGGGATGAAACCTATCACTGGTGTCAGCCGTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV569919       --> CAAAGCCATGCTCAAGCTTGGGATGAAACCTATCACTGGTGTCAGCCGTG  Raphanus raphanistrum subsp. landra
EY922659       --> CAAAGCCATGCTCAAGCTTGGGATGAAACCTATCACTGGTGTCAGCCGTG  Raphanus raphanistrum subsp. landra
EY940442       --> CAAAGCCATGCTGAAGCTTGGGATGAAACCTATCACTGGTGTCAGCCGTG  Raphanus sativus cv Early Scarlet Globe
FD570643       --> CAAAGCCATGCTGAAGCTTGGGATGAGACCTATCACTGGTGTCAGCCGTG  Raphanus sativus cv Early Scarlet Globe
EX762102       --> CAAAGCCATGCTCAAGCTTGGGATGAAACCTATCACTGGTGTCAGCCGTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX773547       --> ..................................................  Raphanus raphanistrum subsp. landra
EY916281       --> CAAAGCCATGCTCAAGCTTGGGATGAAACCTATCACTGGTGTCAGCCGTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD939611       --> CAAAGCCATGCTGAAGCTTGGGATGAAACCTATCACTGGTGTCAGCCGTG  Raphanus sativus var. oleiformis
FD939843       --> CAAAGCCATGCTGAAGCTTGGGATGAAACCTATCACTGGTGTCAGCCGTG  Raphanus sativus var. oleiformis
EV548892       --> CAAAGCCATGCTCAAGCTTGGGATGAAACCTATCACTGGTGTCAGCCGTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD558140       --> CAAAGCCATGCTCAAGCTTGGGATGAAACCTATCACTGGTGTCAGCCGTG  Raphanus raphanistrum subsp. landra
FD986538       --> CAAAGCCATGCTCAAGCTTGGGATGAAACCTATCACTGGTGTCAGCCGTG  Raphanus raphanistrum subsp. landra

               351    -    401
UN13451        --> TCACTGTCAAAAAGAGCAAGAACATCATGTTCGTCATATCAAAACCTGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530511       <-- TCACTGTCAAAAAGAGCAATAACATCATGTTCGTCATATCAAAACCTGAT  Raphanus raphanistrum subsp. maritimus
EV574345       <-- TCACCGTCAAAAAGAGCAAGAACATCATGTTCGTCATATCAAAACCTGAT  Raphanus raphanistrum subsp. landra
EY895964       <-- TCACTGTCAAAAAGAGCAAGAACATCATGTTCGTCATATCAAAACCTGAT  Raphanus raphanistrum subsp. maritimus
EV547203       <-- TCACCGTCAAAAAGAGCAAGAACATCATGTTCGTCATATCAAAACCTGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY918586       <-- TCACTGTCAAAAAGAGCAAGAACATCATGTTCGTCATATCAAAACCTGAT  Raphanus raphanistrum subsp. landra
EW729186       <-- TCACTGTCAAAAAGAGCAAGAACATCATGTTTGTCATATCAAAACCTGAC  Raphanus sativus cv Early Scarlet Globe
FD976496       <-- TCACCGTCAAAAAGAGCAAGAACATCATGTTCGTCATATCAAAACCTGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY911982       <-- TCACCGTCAAAAAGAGCAAGAACATCATGTTCGTCATATCAAAACCTGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD554095       <-- TCACTGTCAAAAAGAGCAAGAACATCATGTTCGTCATATCAAAACCTGAT  Raphanus raphanistrum subsp. landra
EV544484       <-- TCACTGTCAAAAAGAGCAAGAACATCATGTTCGTCATATCAAAACCTGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX777346       <-- TCACTGTCAAAAAGAGCAAGAACATCATGTTCGTCATATCAAAACCTGAT  Raphanus raphanistrum subsp. landra
FD982779       <-- TCACTGTCAAAAAGAGCAAGAACATCATGTTCGTCATATCAAAACCTGAT  Raphanus raphanistrum subsp. landra
FD545674       <-- TCACTGTCAAAAAGAGCAAGAACATCATGTTCGTCATATCAAAACCTGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY920115       <-- TCACTGTCAAAAAGAGCAAGAACATCGTGTTCGTCATATCAAAACCTGAT  Raphanus raphanistrum subsp. landra
FD977892       <-- TCACTGTCAAAAAGAGCAAGAACATCATGTTCGTCATATCAAAACCTGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD983785       <-- TCACCGTCAAAAAGAGCAAGAACATCATGTTCGTCATATCAAAACCTGAT  Raphanus raphanistrum subsp. landra
FD935690       <-- TCACTGTCAAAAAGAGCAAGAACATCATGTTTGTCATATCAAAACCTGAC  Raphanus sativus var. oleiformis
EY936199       <-- TCACTGTCAAAAAGAGCAAGAACATCATGTTTGTCATATCAAAACCTGAC  Raphanus sativus cv Early Scarlet Globe
EY924471       --> TCACTGTCAAAAAGAGCAAGAACATCGTGTTCGTCATATCAAAACCTGAT  Raphanus raphanistrum subsp. landra
EV552256       --> TCACCGTCAAAAAGAGCAAGAACATCATGTTCGTCATATCAAAACCTGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV525888       --> TCACTGTCAAAAAGAGCAATAACATCATGTTCGTCATATCAAAACCTGAT  Raphanus raphanistrum subsp. maritimus
EW724743       --> TCACTGTCAAAAAGAGCAAGAACATCATGTTTGTCATATCAAAACCTGAC  Raphanus sativus cv Early Scarlet Globe
EY900417       --> TCACTGTCAAAAAGAGCAAGAACATCATGTTCGTCATATCAAAACCTGAT  Raphanus raphanistrum subsp. maritimus
FD549635       --> TCACTGTCAAAAAGAGCAAGAACATCATGTTCGTCATATCAAAACCTGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD980636       --> TCACCGTCAAAAAGAGCAAGAACATCATGTTCGTCATATCAAAACCTGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD982304       --> TCACTGTCAAAAAGAGCAAGAACATCATGTTCGTCATATCAAAACCTGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV569919       --> TCACCGTCAAAAAGAGCAAGAACATCATGTTCGTCATATCAAAACCTGAT  Raphanus raphanistrum subsp. landra
EY922659       --> TCACTGTCAAAAAGAGCAAGAACATCATGTTCGTCATATCAAAACCTGAT  Raphanus raphanistrum subsp. landra
EY940442       --> TCACTGTCAAAAAGAGCAAGAACATCATGTTTGTCATATCAAAACCTGAC  Raphanus sativus cv Early Scarlet Globe
FD570643       --> TCACTGTCAAAAAGAGCAAGAACATCATGTTTGTCATATCAAAACCTGAC  Raphanus sativus cv Early Scarlet Globe
EX762102       --> TCACTGTCAAAAAGAGCAAGAACATCATGTTCGTCATATCAAAACCTGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX773547       --> ..................................................  Raphanus raphanistrum subsp. landra
EY916281       --> TCACCGTCAAAAAGAGCAAGAACATCATGTTCGTCATATCAAAACCTGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD939611       --> TCACTGTCAAAAAGAGCAAGAACATCATGTTTGTCATATCAAAACCTGAC  Raphanus sativus var. oleiformis
FD939843       --> TCACTGTCAAAAAGAGCAAGAACATCATGTTTGTCATATCAAAACCTGAC  Raphanus sativus var. oleiformis
EV548892       --> TCACTGTCAAAAAGAGCAAGAACATCATGTTCGTCATATCAAAACCTGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD558140       --> TCACTGTCAAAAAGAGCAAGAACATCATGTTCGTCATATCAAAACCTGAT  Raphanus raphanistrum subsp. landra
FD986538       --> TCACTGTCAAAAAGAGCAAGAACATCATGTTCGTCATATCAAAACCTGAT  Raphanus raphanistrum subsp. landra

               401    -    451
UN13451        --> GTGTTCAAGAGCCCTGCATCGGACACGTACGTGATCTTTGGAGAGGCAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530511       <-- GTGTTCAAGAGCCCTGCATCGGACACGTACGTGATCTTTGGAGAGGCAAA  Raphanus raphanistrum subsp. maritimus
EV574345       <-- GTGTTCAAGAGCCCTGCATCGGACACGTACGTGATCTTTGGAGAGGCAAA  Raphanus raphanistrum subsp. landra
EY895964       <-- GTGTTCAAGAGCCCTGCATCGGACACGTACGTGATCTTTGGAGAGGCAAA  Raphanus raphanistrum subsp. maritimus
EV547203       <-- GTGTTCAAGAGCCCGGCGTCAGACACGTATGTGATCTTTGGAGAGGCAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY918586       <-- GTGTTCAAGAGCCCTGCATCGGACACGTACGTGATCTTTGGAGAGGCAAA  Raphanus raphanistrum subsp. landra
EW729186       <-- GTGTTCAAGAGCCCGGCGTCGGACAC---GTTGATCTTTGGAGAGGCAAA  Raphanus sativus cv Early Scarlet Globe
FD976496       <-- GTGTTCAAGAGCCCGGCGTCAGACACGTATGTGATCTTTGGAGAGGCAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY911982       <-- GTGTTCAAGAGCCCGGCGTCAGACACGTATGTGATCTTTGGAGAGGCAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD554095       <-- GTGTTCAAGAGCCCTGCATCGGACACGTACGTGATCTTTGGAGAGGCAAA  Raphanus raphanistrum subsp. landra
EV544484       <-- GTGTTCAAGAGCCCTGCATTGGACACGTACGTGATCTTTGGAGAGGCAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX777346       <-- GTGTTCAAGAGCCCTGCATCGGACACGTACGTGATCTTTGGAGAGGCAAA  Raphanus raphanistrum subsp. landra
FD982779       <-- GTGTTCAAGAGCCCTGCATCGGACACGTACGTGATCTTTGGAGAGGCAAA  Raphanus raphanistrum subsp. landra
FD545674       <-- GTGTTCAAGAGCCCTGCATCGGACACGTACGTGATCTTTGTAGAGGCAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY920115       <-- GTGTTCAAGAGCCCTGCATCGGACACGTACGTGATCTTTGGAGAGGCAAA  Raphanus raphanistrum subsp. landra
FD977892       <-- GTGTTCAAGAGCCCTGCATCGGACACGTACGTGATCTTTGGAGAGGCAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD983785       <-- GTGTTCAAGAGCCCTGCATCGGACACGTACGTGATCTTTGGAGAGGCAAA  Raphanus raphanistrum subsp. landra
FD935690       <-- GTGTTCAAGAGCCCGGCGTCGGACACGTATGTGATCTTTGGAGAGGCAAA  Raphanus sativus var. oleiformis
EY936199       <-- GTGTTCAAGAGCCCGGCGTCGGACACGTATGTGATCTTTGGAGAGGCAAA  Raphanus sativus cv Early Scarlet Globe
EY924471       --> GTGTTCAAGAGCCCTGCATCGGACACGTACGTGATCTTTGGAGAGGCAAA  Raphanus raphanistrum subsp. landra
EV552256       --> GTGTTCAAGAGCCCGGCGTCAGACACGTATGTGATCTTTGGAGAGGCAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV525888       --> GTGTTCAAGAGCCCTGCATCGGACACGTACGTGATCTTTGGAGAGGCAAA  Raphanus raphanistrum subsp. maritimus
EW724743       --> GTGTTCAAGAGCCCGGCGTCGGACACGT---TGATCTTTGGAGAGGCAAA  Raphanus sativus cv Early Scarlet Globe
EY900417       --> GTGTTCAAGAGCCCTGCATCGGACACGTACGTGATCTTTGGAGAGGCAAA  Raphanus raphanistrum subsp. maritimus
FD549635       --> GTGTTCAAGAGCCCTGCATCGGACACGTACGTGATCTTTGTAGAGGCAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD980636       --> GTGTTCAAGAGCCCGGCGTCAGACACGTATGTGATCTTTGGAGAGGCAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD982304       --> GTGTTCAAGAGCCCTGCATCGGACACGTACGTGATCTTTGGAGAGGCAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV569919       --> GTGTTCAAGAGCCCTGCATCGGACACGTACGTGATCTTTGGAGAGGCAAA  Raphanus raphanistrum subsp. landra
EY922659       --> GTGTTCAAGAGCCCTGCATCGGACACGTACGTGATCTTTGGAGAGGCAAA  Raphanus raphanistrum subsp. landra
EY940442       --> GTGTTCAAGAGCCCGGCGTCGGACACGTATGTGATCTTTGGAGAGGCAAA  Raphanus sativus cv Early Scarlet Globe
FD570643       --> GTGTTCAAGAGCCCGGCGTCGGACACGTATGTGATCTTTGGAGAGGCAAA  Raphanus sativus cv Early Scarlet Globe
EX762102       --> GTGTTCAAGAGCCCTGCATCGGACACGTACGTGATCTTTGGAGAGGCAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX773547       --> ..................................................  Raphanus raphanistrum subsp. landra
EY916281       --> GTGTTCAAGAGCCCGGCGTCAGACACGTATGTGATCTTTGGAGAGGCAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD939611       --> GTGTTCAAGAGCCCGGCGTCGGACACGTATGTGATCTTTGGAGAGGCAAA  Raphanus sativus var. oleiformis
FD939843       --> GTGTTCAAGAGCCCGGCGTCGGACACGTATGTGATCTTTGGAGAGGCAAA  Raphanus sativus var. oleiformis
EV548892       --> GTGTTCAAGAGCCCTGCATCGGACACGTACGTGATCTTTGGAGAGGCAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD558140       --> GTGTTCAAGAGCCCTGCATCGGACACGTACGTGATCTTTGGAGAGGCAAA  Raphanus raphanistrum subsp. landra
FD986538       --> GTGTTCAAGAGCCCTGCATCGGACACGTACGTGATCTTTGGAGAGGCAAA  Raphanus raphanistrum subsp. landra

               451    -    501
UN13451        --> GATCGAGGACTT-GAGCTCTCAGCTCCAGTCCCAGGCTGCAGAGCAGTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530511       <-- GATCGAGGACTT-GAGCTCTCAGCTCCAGTCCCAGGCTGCAGAGCAGTTC
EV574345       <-- GATCGAGGACTT-GAGCTTTCAGCTCCAGTCCCAGGCTGCAGAGCAGTTC
EY895964       <-- GATCGAGGACTT-GAGCTTTCAGCTCCAGTCCCAGGCTGCAGAGCAGTTC
EV547203       <-- GATCGAGGACTT-GAGCTCTCAGCTCCAGTCCCAGGCTGCAGAGCAGTTC
EY918586       <-- GATCGAGGACTT-AAGCTCTCAGCTCCAGTCCCAGGCTGCAGAGCAGTTC
EW729186       <-- GATCGAGGACTT-GAGCTCTCAGCTCCAGTCCCAGGCTGCAGAGCAGTTC
FD976496       <-- GATCGAGGACTT-GAGCTCTCAGCTCCAGTCCCAGGCTGCAGAGCAGTTC
EY911982       <-- GATCGAGGACTT-GAGCTCTCAGCTCCAGTCCCAGGCTGCAGAGCAGTTC
FD554095       <-- GATCGAGGACTT-GAGCTCTCAGCTCCATTTCCAGGCTGCAGAGCAGTTC
EV544484       <-- GATCGAGGACTT-GAGCTTTCAGCTCCAGTCCCAGGCTGCAGAGCAGTTC
EX777346       <-- GATCGAGGACTC-GAGCTTTCAGCTCCAGTCCCAGGCTGCAGAGCAGTTC
FD982779       <-- GATCGAGGACTT-GAGCTCTCAGCTCCAGTACCAGGCTGCAGAGCAGTTC
FD545674       <-- GATCGAGGACTT-GAGCTTTCAGCTCCAGTCCCAGGCTGCAGAGCAGTTC
EY920115       <-- GATCGAGGACTT-GAGCTTTCAGCTC-AGTCCCAGGCTGCAGAGCAGTTC
FD977892       <-- GATCGAGGACTT-GAGCTTTCAGCTCCAGTCCCAGGCTGCAGAGCAGTTC
FD983785       <-- GATCGAGGACTT-GAGCTCTCAGCTCCAGTCCCAGGCTGCAGAGCAGTTC
FD935690       <-- GATCGAGGACTT-GAGCTTTCAGCTCCAGTCCCAGGCTGCAGAGCAGTTC
EY936199       <-- GATCGAGGACTT-GAGCTCTCAGCTCCAGTCCCAGGCTGCAGAGCAGTTC
EY924471       --> GATCGAGGACTT-GAGCTCTCAGCTC-AGTCCCAGGCTGCAGAGCAGTTC
EV552256       --> GATCGAGGACTT-GAGCTCTCAGCTCCAGTCCCAGGCTGCAGAGCAGTTC
EV525888       --> GATCGAGGACTT-GAGCTCTCAGCTCCAGTCCCAGGCTGCAGAGCAGTTC
EW724743       --> GATCGAGGACTT-GAGCTCTCAGCTCCAGTCCCAGGCTGCAGAGCAGTTC
EY900417       --> GATCGAGGACTT-GAGCTCTCAGCTCCAGTCCCAGGCTGCAGAGCAGTTC
FD549635       --> GATCGAGGACTT-GAGCTCTCAGCTCCAGTCCCAGGCTGCAGAGCAGTTC
FD980636       --> GATCGAGGACTT-GAGCTCTCAGCTCCAGTCCCAGGCTGCAGAGCAGTTC
FD982304       --> GATCGAGGACTT-GAGCTCTCAGCTCCAGTCCCAGGCTGCAGAGCAGTTC
EV569919       --> GATCGAGGACTTTGAGCTCTCAGCTCCAGTCCCAGGCTGCAGAGCAGTTC
EY922659       --> GATCGAGGACTT-AAGCTCTCAGCTCCAGTCCCAGGCTGCAGAGCAGTTC
EY940442       --> GATCGAGGACTT-GAGCTCTCAGCTCCAGTCCCAGGCTGCAGAGCAGTTC
FD570643       --> GATCGAGGACTT-GAGCTCTCAGCTCCAGTCCCAGGCTTCAGAGCAGTTC
EX762102       --> GATCGAGGACTT-GAGCTCTCAGCTCCAGTCCCAGGCTGCAGAGCAGTTC
EX773547       --> ..................................................
EY916281       --> GATCGAGGACTT-GAGCTCTCAGCTCCAGTCCCAGGCTGCAGAGCA-TTC
FD939611       --> GATCGAGGACTT-GAGCTCTCAGCTCCAGTCCCAGGCTGCAGAGCAGTTC
FD939843       --> GATCGAGGACTT-GAGCTCTCAGCTCCAGTCCCAGGCTGCAGAGCAGTTC
EV548892       --> GATCGAGGACTT-GAGCTCTCAGCTCCAGTCCCAGGCTGCAGAGCAGTTC
FD558140       --> GATCGAGGACTT-GAGCTCTCAGCTCCATTTCCAGGCTGCAGAGCAGTTC
FD986538       --> GATCGAGGACTT-GAGCTCTCAGCTCCAGTACCAGGCTGCAGAGCAGTTC

               501    -    551
UN13451        --> AAGGCTCC-TGATATCAGCAACGTGGTCTCGCAGGGTGAATCTTCCTCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530511       <-- AAGGCTCC-TGATATCAGCAACGTGGTCTCACAGGGTGAATCTTCCTCGA  Raphanus raphanistrum subsp. maritimus
EV574345       <-- AAGGCTCC-TGATATCAGCAGCGTGGTCTCGCAGGGTGAATCTTCCTCGA  Raphanus raphanistrum subsp. landra
EY895964       <-- AAGGCTCC-TGATATCAGCAACGTGGTCTCACAGGGTGAATTTTCCTCGA  Raphanus raphanistrum subsp. maritimus
EV547203       <-- AAGGCTCC-TGATGTCAGCAGCGTGGTCTCGCAGGGTGAATCTTCCTCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY918586       <-- AAGGCTCC-TGATATCAGCAACGTGGTCTCTCAGGGTGAATCTTCCTCGA  Raphanus raphanistrum subsp. landra
EW729186       <-- AAGGCTCC-TGATATCAGCAACGTGGTCTCGCAGGGTGAATCTTCCTCAA  Raphanus sativus cv Early Scarlet Globe
FD976496       <-- AAGGCTCC-TGATATCAGCAGCGTGGTCTCGCAGGGTGAATCTTCCTCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY911982       <-- AAGGCTCC-TGATATCAGCAGCGTGGTCTCGCAGGGTGAATCTTCCTCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD554095       <-- AAGGCTCC-TGATATCAGCAACGTGGTCTCTCAGGGTGAATCTTCCTCGA  Raphanus raphanistrum subsp. landra
EV544484       <-- AAGGCTCC-TGATATCAGCAACGTGGTCTCACAGGGTGAATTTTCCTCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX777346       <-- AAGGCTCC-TGATATCAGCAACGTGGTCTCTCAGGGTGAATCTTCCTCGA  Raphanus raphanistrum subsp. landra
FD982779       <-- AAGGCTCC-TGATATCAGCAACGTGGTCTCTCAGGGTGAATCTTCCTCGA  Raphanus raphanistrum subsp. landra
FD545674       <-- AAGGCTCC-TGATATCAGCAACGTGGTCTCACAGGGTGGATCTTCCTCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY920115       <-- AAGGCTCC-TGACATCAGCAACGTGGTCTCTCAGGGTGAATCTTCCTCGA  Raphanus raphanistrum subsp. landra
FD977892       <-- AAGGCTCC-TGATATCAGCAACGTGGTCTCACAGGGTGAATCTTCCTCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD983785       <-- AAGGCTCC-TGATATCAGCAGCGTGGTCTCGCAGGGTGAATCTTCCTCGA  Raphanus raphanistrum subsp. landra
FD935690       <-- AAGGCTCC-TGATATCAGCAACGTGGTCTCGCAGGGTGAATCTTCCTCAA  Raphanus sativus var. oleiformis
EY936199       <-- AAGGCTCC-TGATATCAGCAACGTGGTCTCGCAGGGTGAATCTTCCTCAA  Raphanus sativus cv Early Scarlet Globe
EY924471       --> AAGGCTCC-TGACATCAGCAACGTGGTCTCTCAGGGTGAATCTTCCTCGA  Raphanus raphanistrum subsp. landra
EV552256       --> AAGGCTCC-TGATGTCAGCAGCGTGGTCTCGCAGGGTGAATCTTCCTCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV525888       --> AAGGCTCC-TGATATCAGCAACGTGGTCTCACAGGGTGAATCTTCCTCGA  Raphanus raphanistrum subsp. maritimus
EW724743       --> AAGGCTCC-TGATATCAGCAACGTGGTCTCGCAGGGTGAATCTTCCTCAA  Raphanus sativus cv Early Scarlet Globe
EY900417       --> AAGGCTCC-TGATATCAGCAACGTGGTCTCACAGGGTGAATCTTCCTCGA  Raphanus raphanistrum subsp. maritimus
FD549635       --> AAGGCTCC-TGATATCAGCAACGTGGTCTCACAGGGTGGATCTTCCTCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD980636       --> AAGGCTCC-TGATATCAGCAGCGTGGTCTCGCAGGGTGAATCTTCCTCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD982304       --> AAGGCTCC-TGATATCAGCAACGTGGTCTCACAGGGTGAATCTTCCTCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV569919       --> AAGGCTCCCTGATATCAGCAGCGTGGTCTCGCAGGGTGAATCTTCCTCGA  Raphanus raphanistrum subsp. landra
EY922659       --> AAGGCTCC-TGATATCAGCAACGTGGTCTCTCAGGGTGAATCTTCCTCGA  Raphanus raphanistrum subsp. landra
EY940442       --> AAGGCTCC-TGATATCAGCAACGTGGTCTCGCAGGGTGAATCTTCCTCAA  Raphanus sativus cv Early Scarlet Globe
FD570643       --> AAGGCTCC-TGATATCAGCAACGTGGTCTCGCAGGGTGAATCTTCCTCAA  Raphanus sativus cv Early Scarlet Globe
EX762102       --> AAGGCTCC-TGATATCAGCAACGTGGTCTCACAGGGTGAATCTTCCGCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX773547       --> ..................................................  Raphanus raphanistrum subsp. landra
EY916281       --> AAGGCTCC-TGATATCAGCAgc............................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD939611       --> AAGGCTCC-TGATATCAGCAACGTGGTCTCGCAGGGTGAATCTTCCTCAA  Raphanus sativus var. oleiformis
FD939843       --> AAGGCTCC-TGATATCAGCAACGTGGTCTCGCAGGGTGAATCTTCCTCAA  Raphanus sativus var. oleiformis
EV548892       --> AAGGCTCC-TGATATCAGCAACGTGGTCTCACAGGGTGAATCTTCCTCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD558140       --> AAGGCTCC-TGATATCAGCAACGTGGTCTCTCAGGGTGAATCTTCCTCGA  Raphanus raphanistrum subsp. landra
FD986538       --> AAGGCTCC-TGATATCAGCAACGTGGTCTCTCAGGGTGAATCTTCCTCGA  Raphanus raphanistrum subsp. landra

               551    -    601
UN13451        --> GTGCTGCTGCGGTGGTGCAAGATGATGATGAGGAGATTGACGAGGAGGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530511       <-- GTGCTGCTGCGGTGGTGCAAGATGATGATGAGGAGATTGACGAGGAGGGT
EV574345       <-- GTGCTGCTGCAGTGGTGCAAGATGATGATGAGGAGATTGACGAGGAGGGT
EY895964       <-- GTGCTGCTGCGGTGGTGCAAGATGATGATGAGGAGATTGACGAGGAGGGT
EV547203       <-- GTGCTGCTGCGGTGGTGCAAGATGATGATGAGGAGATTGACGAGGAGGGT
EY918586       <-- GTGCTGCTGCGGTGGTGCAAGATGATGATGAGGAGATTGACGAGGAGGGT
EW729186       <-- GTGCTGCTGCGGTGGTGCAAGATGATGATGAGGAGATTGACGAGGAGAGT
FD976496       <-- GTGCTGCTGCGGTGGTGCAAGATGATGATGAGGAGATTGACGAGGAGGGT
EY911982       <-- GTGCTGCTGCGGTGGTGCAAGATGATGATGAGGAGATTGACGAGGAGGGT
FD554095       <-- GTGCTGCTGCGGTGGTTCAAGATGATGATGAGGAGATTGACGAGGAGGGT
EV544484       <-- GTGCTGCTGCGGTGGTGCAAGATGATGATGAGGAGATTGACGAGGAGGGT
EX777346       <-- GTGCTGCTGCGGTGGTGCAAGATGATGATGAGGAGATTGACGAGGAGGGT
FD982779       <-- GTGCTGCTGCGGTGGTGCAAGATGATGATGAGGAGATTGACGAGGAGGGT
FD545674       <-- GTGCTGCTGCGGTGGTGCAAGATGATGATGAGGAGATTGACGAGGAGGGT
EY920115       <-- GTGCTGCTGCGGTGGTGCAAGATGATGATGAGGAGATTGACGAGGAGGGT
FD977892       <-- GTGCTGCTGCGGTGGTGCAAGATGATGATGAGGAGATTGACGAGGAGGGT
FD983785       <-- GTGCTGCTGCAGTGGTGCAAGATGATGATGAGGAGATTGACGAGGAGGGT
FD935690       <-- GTGCTGCTGCGGTGGTGCAAGATGATGATGAGGAGATTGACGAGGAGGGT
EY936199       <-- GTGCTGCTGCGGTGGTGCAAGATGATGATGAGGAGATTGACGAGGAGGGT
EY924471       --> GTGCTGCTGCGGTGGTGCAAGATGATGATGAGGAGATTGACGAGGAGGGT
EV552256       --> GTGCTGCTGCGGTGGTGCAAGATGATGATGAGGAGATTGACGAGGAGGGT
EV525888       --> GTGCTGCTGCGGTGGTGCAAGATGATGATGAGGAGATTGACGAGGAGGGT
EW724743       --> GTGCTGCTGCGGTGGTGCAAGATGATGATGAGGAGATTGACGAGGAGAGT
EY900417       --> GTGCTGCTGCGGTGGTGCAAGATGATGATGAGGAGATTGACGAGGAGGGT
FD549635       --> GTGCTGCTGCGGTGGTGCAAGATGATGATGAGGAGATTGACGAGGAGGGT
FD980636       --> GTGCTGCTGCGGTGGTGCAAGATGATGATGAGGAGATTGACGAGGAGGGT
FD982304       --> GTGCTGCTGCGGTGGTGCAAGATGATGATGAGGAGATTGACGAGGAGGGT
EV569919       --> GTGCTGCTGCAGTGGTGCAAGATGATGATGAGGAGATTGACGAGGAGGGT
EY922659       --> GTGCTGCTGCGGTGGTGCAAGATGATGATGAGGAGATTGACGAGGAGGGT
EY940442       --> GTGCTGCTGCGGTGGTGCAAGATGATGATGAGGAGATTGACGAGGAGGGT
FD570643       --> GTGCTGCTGCGGTGGTGCAAGATGATGATGAGGAGATTGACGAGGAGGGT
EX762102       --> GTGCTGCTGCGGTGGTGCAAGATGATGATGAGGAGATTGACGAGGAGGGT
EX773547       --> ..................................................
EY916281       --> ..................................................
FD939611       --> GTGCTGCTGCGGTGGTGCAAGATGATGATGAGGAGATTGACGAGGAGGGT
FD939843       --> GTGCTGCTGCGGTGGTGCAAGATGATGATGAGGAGATTGACGAGGAGGGT
EV548892       --> GTGCTGCTGCGGTGGTGCAAGATGATGATGAGGAGATTGACGAGGAGGGT
FD558140       --> GTGCTGCTGCGGTGGTTCAAGATGATGATGAGGAGATTGACGAGGAGGGT
FD986538       --> GTGCTGCTGCGGTGGTGCAAGATGATGATGAGGAGATTGACGAGGAGGGT

               601    -    651
UN13451        --> GTTGACTCAAAGGACATTGAGTTGGTGATGACCCAAGCAGGAGTTCCTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530511       <-- GTTGACTCAAAGGACATTGAGTTGGTGATGACCCAAGCAGGAGTTCCTAG
EV574345       <-- GTTGACTCAAAGGACATCGAGTTGGTGATGACCCAAGCAGGAGTTCCTAG
EY895964       <-- GTTGACTCAAAGGACATTGAGTTGGTGATGACCCAAGCAGGAGTTCCTAG
EV547203       <-- GTTGACTCAAAGGACATTGAGTTGGTGATGACCCAAGCAGGAGTTCCTAG
EY918586       <-- GTTGACTCAAAG-ACATTGAGTTGGTGATGACCCAAGCAGGAGTTCCTAG
EW729186       <-- GTTGACTCAAAGGACGTTGAGTTGGTGATGACCCAAGCAGGAGTTCCTAG
FD976496       <-- GTTG--AAAAAGGACATTGAGTTGGTGATGACCCAAGCAGGAGTTCCTAG
EY911982       <-- GTTGACTCAAAGGACATTGAGTTGGTGATGACCCAAGCAGGAGTTCCTAG
FD554095       <-- GTTGACTCAAAGGACATTGAGTTGGTGATGACCCAAGCAGGAGTTCCTAG
EV544484       <-- GTTGACTCAAAGGACATTGAGTTGGTGATGACCCAAGCAGGAGTTCCTAG
EX777346       <-- GTTGACTCAAAGGACATTGAGTTGGTGATGACCCAAGCAGGAGTTCCTAG
FD982779       <-- GTTGACTCAAAGGACATTGAGTTGGTGATGACCCAAGCAGGAGTTCCTAG
FD545674       <-- GTTGACTCAAAGGACATTGAGTTGGTGATGACCCAAGCAGGAGTTCCTAG
EY920115       <-- GTTGACTCAAAGGACATTGAGTTGGTGATGACCCAAGCAGGAGTTCCTAG
FD977892       <-- GTTGACTCAAAGGACATTGAGTTGGTGATGACCCAAGCAGGAGTTCCTAG
FD983785       <-- GTTGACTCAAAGGACATCGAGTTGGTGATGACCCAAGCAGGAGTTCCTAG
FD935690       <-- GTTGACTCAAAGGACATTGAGTTGGTGATGACCCAAGCAGGAGTTCCTAG
EY936199       <-- GTTGACTCAAAGGACATTGAGTTGGTGATGACCCAAGCAGGAGTTCCTAG
EY924471       --> GTTGACTCAAAGGACATTGAGTTGGTGATGACCCAAGCAGGAGTTCCTAG
EV552256       --> GTTGACTCAAAGGACATTGAGTTGGTGATGACCCAAGCAGGAGTTCCTAG
EV525888       --> GTTGACTCAAAGGACATTGAGTTGGTGATGACCCAAGCAGGAGTTCCTAG
EW724743       --> GTTGACTCAAAGGACGTTGAGTTGGTGATGACCCAAGCAG-AGTTC....
EY900417       --> GTTGACTCAAAGGACATTGAGTTGGTGATGACCCAAGCAG-AGTTCCTAG
FD549635       --> GTTGACTCAAAGGACATTGAGTTGGTGATGACCCAAGCAG-AGTTCCTAG
FD980636       --> GTTGA--AAAAGGACATTGAGTTGGTGATGACCCAAGCAGGAGTTCCTAG
FD982304       --> GTTGACTCAAAGGACATTGAGTTGGTGATGACCCAAGCAGGAGTTCCTAG
EV569919       --> GTTGACTCAAAGGACATCGAGTTGGTGATGACCCAAGCAGGAGTTCCTAG
EY922659       --> GTTGACTCAAAG-ACATTGAGTTGGTGATGACCCAAGCAGGAGTTCCTAG
EY940442       --> GTTGACTCAAAGGACATTGAGTTGGTGATGACCCAAGCAG-AGTTCCTAG
FD570643       --> GTTGACTCAAAGGACATTGAGTTGGTGATGACCCAAGCAG-AGTTCCTAG
EX762102       --> GTTGACTCAAAGGACATTGAGTTGGTGATGACCCAAGCAGGAGTTCCTAG
EX773547       --> ..................................................
EY916281       --> ..................................................
FD939611       --> GTTGACTCAAAGGACATTGAGTTGGTGATGACCCAAGC............
FD939843       --> GTTGAC............................................
EV548892       --> GTTGACTCAAAGGACATTGAGTTGGTGATGACCCAAGCAGGAGTTCCTAG
FD558140       --> GTTGACTCAAAGGACATTGAGTTGGTGATGACCCAAGCAGGAGTTCCTAG
FD986538       --> GTTGACTCAAAGGACATTGAGTTGGTGATGACCCAAGCAGGAGTTCCTAG

               651    -    701
UN13451        --> GCCAAGAGCCGTGAAGGCGCTTAAGGCTGCTGATGGGG-ATATTGTCTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530511       <-- GCCAAGAGCCGTGAAGGCGCTTAAGGCTGCTGATGGGG-ATATTGTCTCT  Raphanus raphanistrum subsp. maritimus
EV574345       <-- GCCAAGGGCCGTGAAGGCGCTTAAGGCTGCTGATGGAG-ATATTGTTTCT  Raphanus raphanistrum subsp. landra
EY895964       <-- GCCAAGAGCCGTGAAGGCGCTTAAGGCTGCTGATGGGG-ATATTGTTTCT  Raphanus raphanistrum subsp. maritimus
EV547203       <-- GCCAAGAGCCGTGAAGGCGCTTAAGGCTGCTGATGGGG-ATATTGTCTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY918586       <-- GCCAAGAGCCGTGAAGGCGCTTAAGGCTGCTGATGGGG-ATATTGTCTCT  Raphanus raphanistrum subsp. landra
EW729186       <-- GCCAAGGGCTGTGAAGGCGCTTAAGGCTGCTGATGGGG-ATATTGTCTCT  Raphanus sativus cv Early Scarlet Globe
FD976496       <-- GCCAAGAGCCGTGAAGGCGCTTAAGGCTGCTGATGGGG-ATATTGTCTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY911982       <-- GCCAAGAGCCGTGAAGGCGCTTAAGGCTGCTGATGGGG-ATATTGTCTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD554095       <-- GCCAAGAGCCGTGAAGGCGCTTAAGGCTGCTGATGGGG-ATATTGTCTCT  Raphanus raphanistrum subsp. landra
EV544484       <-- GCCAAGAGCCGTGAAGGCGCTTAAGGCTGCTGATGGGG-ATATTGTTTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX777346       <-- GCCAAGAGCCGTGAAGGCGCTTAAGGCTGCTGATGGGG-ATATTGTCTCT  Raphanus raphanistrum subsp. landra
FD982779       <-- GCCAAGAGCCGTGAAGGCGCTTAAGGCTGCTGATGGGG-ATATTGTCTCT  Raphanus raphanistrum subsp. landra
FD545674       <-- GCCAAGAGCCGTGAAGGCGCTTAAGGCTGCTGATGGGG-ATATTGTCTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY920115       <-- GCCAAGAGCCGTGAAGGCGCTTAAGGCTGCTGATGGGG-ATATTGTTTCT  Raphanus raphanistrum subsp. landra
FD977892       <-- GCCAAGAGCCGTGAAGGCGCTTAAGGCTGCTGATGGGG-ATATTGTCTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD983785       <-- GCCAAGGGCCGTGAAGGCGCTTAAGGCTGCCGATGGAG-ATATTGTCTCT  Raphanus raphanistrum subsp. landra
FD935690       <-- GCCAAGGGCTGTGAAGGCGCTTAAGGCTGCTGATGGGG-ATATTGTTTCT  Raphanus sativus var. oleiformis
EY936199       <-- GCCAAGGGCTGTGAAGGCGCTTAAGGCTGCTGATGGGG-ATATTGTTTCT  Raphanus sativus cv Early Scarlet Globe
EY924471       --> GCCAAGAGCCGTGA-GGCGCTTAACGCTGCTGATGGGG-ATATTGTCTCT  Raphanus raphanistrum subsp. landra
EV552256       --> GCCAAGAGCCGTGAAAGCGCT.............................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV525888       --> GCCAAGAGCCGTGAAGGCGCTTAAGGCTGCTGATGGGG-ATATTGTCTCT  Raphanus raphanistrum subsp. maritimus
EW724743       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY900417       --> GCCAAGAGCCGTGAAAGCGCTTAAG-CTGCTGATGGGG-ATATTGTCTCT  Raphanus raphanistrum subsp. maritimus
FD549635       --> GCCAAGAGCCGTGAAAGCGC..............................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD980636       --> GCCAAGAGCCGTGAAGGCGCTTAAAGCTGCTGATGGGG-ATATTGTCTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD982304       --> GCCAAGAGCCGTGAAGGCG...............................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV569919       --> GCCAAGGGCCGTGAAGGCGCTTAAGGCTGCTGATGGAG-ATATTGTCTCT  Raphanus raphanistrum subsp. landra
EY922659       --> GCCAAGAGCCGTGAAGGCGCTTAAG-CTGCTGATGGGG-ATATTGTCTCT  Raphanus raphanistrum subsp. landra
EY940442       --> GCCAAGGGCTGTGAAGGCG...............................  Raphanus sativus cv Early Scarlet Globe
FD570643       --> GCCAAGGGCTGTGAAGGCGCTTAAAGCTGCTGATGGGG-ATATTGTCTCT  Raphanus sativus cv Early Scarlet Globe
EX762102       --> GCCAAGAGCCGTGAAGGCGCTTAAGGCTGCTGATGGGG-ATATTGTCTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX773547       --> ..................................................  Raphanus raphanistrum subsp. landra
EY916281       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD939611       --> ..................................................  Raphanus sativus var. oleiformis
FD939843       --> ..................................................  Raphanus sativus var. oleiformis
EV548892       --> GCCAAGAGCCGTGAAGGCGCTTAAGGCTGCTGATGGGG-ATATTGTCTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD558140       --> GCCAAGAGCCGTGAAGGCGCTTAAGGCTGCTGATGGGGGATATTGTCTCT  Raphanus raphanistrum subsp. landra
FD986538       --> GCCAAGAGCCGTGAAGGCGCTTAAGGCTGCTGATGGGG-ATATTGTCTCT  Raphanus raphanistrum subsp. landra

               701    -    751
UN13451        --> GCCATCATGG-AACTTACCACCTAAA-CCAAAATCTTTTCAACTTTAATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530511       <-- GCCATCATGG-AACTTACCACCTAAA-CCAAAATCTTTTCAACTTTAATG  Raphanus raphanistrum subsp. maritimus
EV574345       <-- GCCATCATGG-AACTTACCACCTAAAACCAATATCTTTTCAACTT-AATG  Raphanus raphanistrum subsp. landra
EY895964       <-- GCCATCATGG-GACTTACCACCTAAA-CCAAAATCTTTTCAACTTTAATG  Raphanus raphanistrum subsp. maritimus
EV547203       <-- GCCATCATGG-AACTTACCACCTAAA-CCAAAATCTTTTCAACTTTAATG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY918586       <-- GCCATCATGG-AACTTACCACCTAAA-CCAAAATCTTTTCAACTTTAATG  Raphanus raphanistrum subsp. landra
EW729186       <-- GCCATCATGG-AACTTACCACCTAAAACCAATATCTTTTCAACTT-AATG  Raphanus sativus cv Early Scarlet Globe
FD976496       <-- GCCATCATGG-AACTTACCACCTAAA-CCAAAATCTTTTCAACTTTAATG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY911982       <-- GCCATCATGG-AACTTACCACCTAAA-CCAAAATCTTTTCAACTTTAATG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD554095       <-- GCCATCATGG-AACTTACCACCTAAA-CCAAGATCTTTTCAACTTTAATG  Raphanus raphanistrum subsp. landra
EV544484       <-- GCCATCATGG-AACTTACCACCTAAA-CCAAAATCTTTTCAACTTTAATG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX777346       <-- GCCATCATGG-AACTTACCACCTAAA-CCAAAATCTTTTCAACTTTAATG  Raphanus raphanistrum subsp. landra
FD982779       <-- GCCATCATGG-AACTTACCACCTAAA-CCAAAATCTTTTCAACTTTAATG  Raphanus raphanistrum subsp. landra
FD545674       <-- GCCATCATGG-AACTTACCACCTAAA-CCAAAATCTTTTCAACTTTAATG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY920115       <-- GCCATCATGG-AACTTACCACCTAAA-CCAAAATCTTTTCAACTTTAATG  Raphanus raphanistrum subsp. landra
FD977892       <-- GCCATCATGG-AACTTACCACCCAAA-CCAAAATCTTTTCAACTTTAATG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD983785       <-- GCCATCATGG-AACTTACCACCTAAAACCAATATCTTTTCAACTT-AATG  Raphanus raphanistrum subsp. landra
FD935690       <-- GCCATCATGG-AACTTACCACCTAAAACCAATATCTTTTCAACTT-AATG  Raphanus sativus var. oleiformis
EY936199       <-- GCCATCATGG-AACTTACCACCTAAAACCAATATCTTTTCAACTT-AATG  Raphanus sativus cv Early Scarlet Globe
EY924471       --> GCCATCATGG-AACTTA.................................  Raphanus raphanistrum subsp. landra
EV552256       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV525888       --> GCCATCATGG-AACTTACCACCTAAA-CCAAAATCTTTTCAACTTTAATG  Raphanus raphanistrum subsp. maritimus
EW724743       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY900417       --> GCCATCATGG-GACTTACCACCTAAA-CCAAAATCTTT-CAACTTTAATG  Raphanus raphanistrum subsp. maritimus
FD549635       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD980636       --> GCCATCATGG-AACTTACCACCTAAA-CCAAAATCTTTTCAACTTTAATG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD982304       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV569919       --> GCCATCATGGGAACTTACCACCTAAAACCAATATCTTTTCAACTT-AATG  Raphanus raphanistrum subsp. landra
EY922659       --> GCCATCATGG-AACTTACCACCTAAA-CCAAAATCTTTTCAACTTTAATG  Raphanus raphanistrum subsp. landra
EY940442       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD570643       --> GCCATCATGG-AACTTACCACCTAAAACCAATATCTTTTCAACTT-AATG  Raphanus sativus cv Early Scarlet Globe
EX762102       --> GCCATCATGG-AACTTACCACCTAAA-CCAAAATCTTTTCAACTTTAATG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX773547       --> ..................................................  Raphanus raphanistrum subsp. landra
EY916281       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD939611       --> ..................................................  Raphanus sativus var. oleiformis
FD939843       --> ..................................................  Raphanus sativus var. oleiformis
EV548892       --> GCCATCATGG-AACTTACCACCTAAA-CCAAAATCTTTTCAACTTTAATG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD558140       --> GCCATCATGG-AACTTACCACCTAAA-CCAAGATCTTTTCAACTTTAATG  Raphanus raphanistrum subsp. landra
FD986538       --> GCCATCATGG-AACTTACCACCTAAA-CCAAAATCTTTTCAACTTTAATG  Raphanus raphanistrum subsp. landra

               751    -    801
UN13451        --> TGCGTGTGTCAGAGTGATTCAGAAATTTTTGTTTTTCATGTTTCCTTGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530511       <-- TGCGTGTGTCAGAGTGATTCAGAAATTTTTGTTTTTCATGTTTCCTTGGA  Raphanus raphanistrum subsp. maritimus
EV574345       <-- TGCGTGTGTCAGAGTGATTCAGAAATTTTTGTTTTTCATGTTTCCTTGGG  Raphanus raphanistrum subsp. landra
EY895964       <-- TGCGTGTGTCAGAGTGATTCAGAAATTTTTGTTTTTCATGTTTCCTTGGA  Raphanus raphanistrum subsp. maritimus
EV547203       <-- TGCGTGTGTCAGAGTGATTCAGAAATTTTTGTTTTTCATGTTTCCTTGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY918586       <-- TGCGTGTGTCAGAGTGATTCAGAAATTTTTGTTTTTCATGTTTCCTTGGA  Raphanus raphanistrum subsp. landra
EW729186       <-- TGCGTGTGTCAGAGTGATTCAGAAATTTTTGTTTTTCATGTTTCCTTGGG  Raphanus sativus cv Early Scarlet Globe
FD976496       <-- TGCGTGTGTCAGAGTGATTCAGAAATTTTTGTTTTTCATGTTTCCTTGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY911982       <-- TGCGTGTGTCAGAGTGATTCAGAAATTTTTGTTTTTCATGTTTCCTTGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD554095       <-- TGCGTGTGTCAGAGTGATTCAGAAATTTTTGTTTTTCATGTTTCCTTGGA  Raphanus raphanistrum subsp. landra
EV544484       <-- TGCGTGTGTCAGAGTGATTCAGAAATTTTTGTTTTTCATGTTTCCTTGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX777346       <-- TGCGTGTGTCAGAGTGATTCAGAAATTTTTGTTTTTCATGTTTCCTTGGA  Raphanus raphanistrum subsp. landra
FD982779       <-- TGCGTGTGTCAGAGTGATTCAGAAATTTTTGTTTTTCATGTTTCCTTGGA  Raphanus raphanistrum subsp. landra
FD545674       <-- TGCGTGTGTCAGAGTGATTCAGAAATTTTTGTTTTTCATGTTTCCTTGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY920115       <-- TGCGTGTGTCAGAGTGATTCAGAAATTTTTGTTTTTCATGTTTCCTTGGA  Raphanus raphanistrum subsp. landra
FD977892       <-- TGCGTGTGTCAGAGTGATTCAGAAATTTTTGTTTTTCATGTTTCCTTGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD983785       <-- TGCGTGTGTCAGAGTGATTCAGAAATTTTTGTTCTTCATGTTTCCTTGGG  Raphanus raphanistrum subsp. landra
FD935690       <-- TGCGTGTGTCAGAGTGATTCAGAAATTTTTGTTTTTCATGTTTCCTTGGG  Raphanus sativus var. oleiformis
EY936199       <-- TGCGTGTGTCAGAGTGATTCAGAAATTTTTGTTTTTCATGTTTCCTTGGG  Raphanus sativus cv Early Scarlet Globe
EY924471       --> ..................................................  Raphanus raphanistrum subsp. landra
EV552256       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV525888       --> TGCGTGTGTCAGAGTGATTCAGAAATTTTTGTTTTTCATGTTTCC.....  Raphanus raphanistrum subsp. maritimus
EW724743       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY900417       --> TGCGTGTGTCAGAGTGAT-CAGAAATTTT-GTTTT-CATGTTTCCTTGGA  Raphanus raphanistrum subsp. maritimus
FD549635       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD980636       --> TGCGTGTGTCAGAGTGATT...............................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD982304       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV569919       --> TGCGTGTGTCAGAGTGATTCAGAAATTTTTGTTTTTCATGTTTCCTTGGG  Raphanus raphanistrum subsp. landra
EY922659       --> TGCGTGTGTCAGAGTGATTCAGAAATTTTTGTTTTTCATGTTTC......  Raphanus raphanistrum subsp. landra
EY940442       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD570643       --> TGCGTGTGTCAGAGTGATTCAGAAATTTTTGTTTTTCATGTTTC......  Raphanus sativus cv Early Scarlet Globe
EX762102       --> TGCGTGTGTCAGAGTGATTCAGAAATTTT-GTTTTTCATGTTTCCTTGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX773547       --> ..................................................  Raphanus raphanistrum subsp. landra
EY916281       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD939611       --> ..................................................  Raphanus sativus var. oleiformis
FD939843       --> ..................................................  Raphanus sativus var. oleiformis
EV548892       --> TGCGTGTGTCAGAGTGATTCAGAAATTTTTGTTTTTCATGTTTCCTTGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD558140       --> TGCGTGTGTCAGAGTGATTCAGAAATTTTgt...................  Raphanus raphanistrum subsp. landra
FD986538       --> TGCGTGTGTCAGAGTGATTCAGAAATTTTTGTTTTTCATGTTTCCTTGGA  Raphanus raphanistrum subsp. landra

               801    -    851
UN13451        --> AGTGATTTTCAATGTTGTATCAGTAAAAAACCTCATAGATTATTGAATTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530511       <-- AGTGATTTTCAATGTTGTATCAGTAAAAAACCTCATAGATTATTGAATTT  Raphanus raphanistrum subsp. maritimus
EV574345       <-- AGTGATTTTCGATGTTGTATCAGTAAGAAACCTCATAGATTATTGAATTT  Raphanus raphanistrum subsp. landra
EY895964       <-- AGTGATTTTCAATGTTGTATCAGTAAAAAACCTCATAGATTATTGAATTT  Raphanus raphanistrum subsp. maritimus
EV547203       <-- AGTGATTTTCAATGTTGTATCAGTAAAAAACCTCATAGATTATTGAATTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY918586       <-- AGTGATTTTCAATGTTGTATCAGTAAAAAACCTCATAGATTATTGAATTT  Raphanus raphanistrum subsp. landra
EW729186       <-- AGTGATTTTCGATGTTGTATCAGTAAGAAACCTCATAGATTATTGAATTT  Raphanus sativus cv Early Scarlet Globe
FD976496       <-- AGTGATTTTCAATGTTGTATCAGTAAAAAACCTCATAGATTATTGAATTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY911982       <-- AGTGATTTTCAATGTTGTATCAGTAAAAAACCTCATAGATTATTGAATTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD554095       <-- AGTGATTTTCAATGTTGTATCAGTAAAAAACCTCATAGATTATTGAATTT  Raphanus raphanistrum subsp. landra
EV544484       <-- AGTGATTTTCAATGTTGTATCAGTAAAAAACCTCATAGATTATTGAATTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX777346       <-- AGTGATTTTCAATGTTGTATCAGTAAAAAACCTCATAGATTATTGAATTT  Raphanus raphanistrum subsp. landra
FD982779       <-- AGTGATTTTCAATGTTGTATCAGTAAAAAACCTCATAGATTATTGAATTT  Raphanus raphanistrum subsp. landra
FD545674       <-- AGTGATTTTCAATGTTGTATCAGTAAAAAACCTCATAGATTATTGAATTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY920115       <-- AGTGATTTTCAATGTTGTATCAGTAAAAAACCTCATAGATTATTGAATTT  Raphanus raphanistrum subsp. landra
FD977892       <-- AGTGATTTTCAATGTTGTATCAGTAAAAAACCTCATAGATTATTGAATTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD983785       <-- AGTGATTTTCTATGTTGTATCAGTAAGAAACCTCATAGATTATTGAATTT  Raphanus raphanistrum subsp. landra
FD935690       <-- AGTGATTTTCGATGTTGTATCAGTAAGAAACCTCATAGATTATTGAATTT  Raphanus sativus var. oleiformis
EY936199       <-- AGTGATTTTCGATGTTGTATCAGTAAGAAACCTCATAGATTATTGAATTT  Raphanus sativus cv Early Scarlet Globe
EY924471       --> ..................................................  Raphanus raphanistrum subsp. landra
EV552256       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV525888       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EW724743       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY900417       --> -GTGATTT-C-ATGTTGTATCA............................  Raphanus raphanistrum subsp. maritimus
FD549635       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD980636       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD982304       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV569919       --> AGTGATTTTCGATGTTGTATCAGTAA-GAACCTCATAGATTATTGAATTT  Raphanus raphanistrum subsp. landra
EY922659       --> ..................................................  Raphanus raphanistrum subsp. landra
EY940442       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD570643       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX762102       --> -GTGATTTTCA-TGTTGTATCAGTAAAAA.....................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX773547       --> ..................................................  Raphanus raphanistrum subsp. landra
EY916281       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD939611       --> ..................................................  Raphanus sativus var. oleiformis
FD939843       --> ..................................................  Raphanus sativus var. oleiformis
EV548892       --> AGTGATTTTCAATGTTGTATCAGTAAAAAACCTCATAGATTATTGAATTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD558140       --> ..................................................  Raphanus raphanistrum subsp. landra
FD986538       --> AGTGATTTTCAATGTTGTATCAGTAAAAA-CCTCATAGATTATTGAATTT  Raphanus raphanistrum subsp. landra

               851    -    901
UN13451        --> CAGTTTGATTTGGTTTTGAATATTGGTAAGTGTTTGCGGTTACAGTTAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530511       <-- CAGTTTGATTTGGTTTTGAATATTGGTAAGTGTTTGCGGTTACAGTTAAG
EV574345       <-- CAGTTTGATTTGGc....................................
EY895964       <-- CAGTTTGATTTGGTTTcg................................
EV547203       <-- CAGTTTGATTTGGTTTcg................................
EY918586       <-- CAGTTTGATTTGGTTTTGg...............................
EW729186       <-- CAGTTTG...........................................
FD976496       <-- CAGTTTGATTTGGTTTTG................................
EY911982       <-- CAGTTTGATTTGGTTTTG................................
FD554095       <-- CAGTTTGATTTGGTTTgg................................
EV544484       <-- CAGTTTGATTTGGTTTTG................................
EX777346       <-- CAGTTTGATTTGGTTTTGAATATTGGTAAGTGTTTGCGGTTACAGTTAAG
FD982779       <-- CAGTTTGATTTGGTTTTGAATATTGGTAAGTGTTTGCGGTTACAGTTAAG
FD545674       <-- CAGTTTGATTTGGTTTTG................................
EY920115       <-- CAGTTTGATTTGGTTTTGAATATTGGTAAGTGTTTGCGGTTACAGTTAAG
FD977892       <-- CAGTTTGATTTGGTTTTG................................
FD983785       <-- CAGTTTGATTTGGTTTTG................................
FD935690       <-- CAGTTcg...........................................
EY936199       <-- CAGTTTGATTTGGTTTcg................................
EY924471       --> ..................................................
EV552256       --> ..................................................
EV525888       --> ..................................................
EW724743       --> ..................................................
EY900417       --> ..................................................
FD549635       --> ..................................................
FD980636       --> ..................................................
FD982304       --> ..................................................
EV569919       --> CAGTTTGATTTGGc....................................
EY922659       --> ..................................................
EY940442       --> ..................................................
FD570643       --> ..................................................
EX762102       --> ..................................................
EX773547       --> ..................................................
EY916281       --> ..................................................
FD939611       --> ..................................................
FD939843       --> ..................................................
EV548892       --> CAGTTTGATTTGGTTT..................................
FD558140       --> ..................................................
FD986538       --> CAGTTTGATTTGGTTTTGA-TATTGGTAAGTGTTTGCGGTTACAGTTAAG

               901    -    951
UN13451        --> GACTTTATGATACGTCTTTTGGTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~
EV530511       <-- GACTTTATGAT..............
EV574345       <-- .........................
EY895964       <-- .........................
EV547203       <-- .........................
EY918586       <-- .........................
EW729186       <-- .........................
FD976496       <-- .........................
EY911982       <-- .........................
FD554095       <-- .........................
EV544484       <-- .........................
EX777346       <-- GACTTTATGATACGTCTTTTGGTCC
FD982779       <-- GACTTTATGATACGTC.........
FD545674       <-- .........................
EY920115       <-- GACTTTATGAT..............
FD977892       <-- .........................
FD983785       <-- .........................
FD935690       <-- .........................
EY936199       <-- .........................
EY924471       --> .........................
EV552256       --> .........................
EV525888       --> .........................
EW724743       --> .........................
EY900417       --> .........................
FD549635       --> .........................
FD980636       --> .........................
FD982304       --> .........................
EV569919       --> .........................
EY922659       --> .........................
EY940442       --> .........................
FD570643       --> .........................
EX762102       --> .........................
EX773547       --> .........................
EY916281       --> .........................
FD939611       --> .........................
FD939843       --> .........................
EV548892       --> .........................
FD558140       --> .........................
FD986538       --> -ACTTTATGATA.............