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Alignment for radish unigene UN13495

               1      -     51
UN13495        --> CTTGCACAATATAAAGATTGCTTAGAAATGAAGTTGACCAATAAATGTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV525660       <-- ..................................................
FD562567       <-- ..................................................
EY913001       <-- ..................................................
EX762361       <-- ..................................................
EV565328       <-- ..................................................
EW717039       <-- ..................................................
EW726907       <-- ..................................................
EW726177       <-- ..................................................
EV565329       <-- ..................................................
EX773764       <-- ..................................................
EV524734       <-- ..................................................
EY900342       <-- ..................................................
FD551260       <-- ..................................................
EX897686       <-- ..................................................
EV529662       --> CTTGCACAATATAAAGATTGCTTAGAAATGAAGTTGACCAA-AAATGTTA
FD547156       --> ..................cGCTTAGAAATGAAGTTGACCAATAAATGTTT
EW729584       --> .......................AGAAATGAAGTTGACCAATAAATGTTT
EX766633       --> ...................................GACCAATAAATGTTT
EX777586       --> ...................................GACCAA-AAATGTTA
EY895907       --> ...................................GACCAATAAATGTTT
EY909316       --> ...................................gcCCAATAAATGTTT
EX901408       --> ........................................gTAAATGTTT
EV570640       --> ....................................ggccaaAAATGTTA
FD566441       --> ...........................................agttgTT
EV530343       --> ..................................................

               51     -    101
UN13495        --> AAAGCTTTATTCTGGAGACAAATATCAAAAGTTAACACAGTATCTATACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV525660       <-- ........................TCAAAAGTTAACACAGTATCTATACA  Raphanus raphanistrum subsp. maritimus
FD562567       <-- .............................................ATACA  Raphanus sativus var. oleiformis
EY913001       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX762361       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV565328       <-- ..................................................  Raphanus raphanistrum subsp. landra
EW717039       <-- ..................................................  Raphanus sativus var. oleiformis
EW726907       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EW726177       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV565329       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX773764       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV524734       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY900342       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD551260       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX897686       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV529662       --> AAACCTT-ATTTTGGAGACAAATATCAAACGTCAACACAGTATCTATACA  Raphanus raphanistrum subsp. maritimus
FD547156       --> AAAGCTTTATTCTGGAGACAACTATCAAAAGTTAACACAGTATCTATACA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW729584       --> AAAGCTTTATTCTGGAGACAAATATCAAAAGTTAACACAGTATCTATACA  Raphanus sativus cv Early Scarlet Globe
EX766633       --> AAAGCTTTATTCTGGAGACAACTATCAAAAGTTAACACAGTATCTATACA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX777586       --> AAACCTT-ATTTTGGAGACAAATATCAAACGTCAACACAGTATCTATACA  Raphanus raphanistrum subsp. landra
EY895907       --> AAAGCTTTATTCTGGAGACAAATATCAAAAGTTAACACAGTATCTATACA  Raphanus raphanistrum subsp. maritimus
EY909316       --> AAAGCTTTATTCTGGAGACAACTATCAAAAGTTAACACAGTATCTATACA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX901408       --> AAAGCTTTATTCTGGAGACAAATATCAAAAGTTAACACAGTATCTATACA  Raphanus sativus cv Early Scarlet Globe
EV570640       --> AAACCTT-ATTTTGGAGACAAATATCAAACGTCAACACAGTATCTATACA  Raphanus raphanistrum subsp. landra
FD566441       --> AAAACCTTATTTTGGAGACAAATATCAAACGTCAACACAGTATCTATACA  Raphanus sativus var. oleiformis
EV530343       --> ........................TCAAAAGTTAACACAGTATCTATACA  Raphanus raphanistrum subsp. maritimus

               101    -    151
UN13495        --> CTATACAAGGAG--GCTAGTAATACAAAGGAAAGAAAGAGAAACAGATAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV525660       <-- CTATACAAGGAG--GCTAGTAATACAAAGGAAAGAAAGAGAAACAGATAC  Raphanus raphanistrum subsp. maritimus
FD562567       <-- CTATACAGAGAG--GCTAGTA-TACAA-GG-AAG-AAGAGAAACAGATAC  Raphanus sativus var. oleiformis
EY913001       <-- .TATACAAGGAG--GCTAGTAATACAAAGGAAAGAAAGAGAAACAGATAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX762361       <-- .............gaCTAGTA-TACAAAG-AAAGAAAGAGAAACAGATAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV565328       <-- ..........................AAGGAAAGAAAGAGAAACAGATAC  Raphanus raphanistrum subsp. landra
EW717039       <-- ..................................................  Raphanus sativus var. oleiformis
EW726907       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EW726177       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV565329       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX773764       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV524734       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY900342       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD551260       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX897686       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV529662       --> CAATACAAGGAGAGGCTAGTAATACAAAGGAAAGAAAGAGAAACAGATAC  Raphanus raphanistrum subsp. maritimus
FD547156       --> CTATACAAGGAG--GCTAGTAATACAAAGGAAAGAAAGAGAAACAGATAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW729584       --> CTATACAAGGAG--GCTAGTAATACAAAGGAAAGAAAGAGAAACAGATAC  Raphanus sativus cv Early Scarlet Globe
EX766633       --> CTATACAAGGAG--ACTAGTAATACAAAGGAAAGAAAGAGAAACAGATAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX777586       --> CTATACAAGGAGAGGCTAGTAATACAAAGGAAAGAAAGAGAAACAGATAC  Raphanus raphanistrum subsp. landra
EY895907       --> CTATACAAGGAG--GCTAGTAATACAAAGGAAAGAAAGAGAAACAGATAC  Raphanus raphanistrum subsp. maritimus
EY909316       --> CTATACAAGGAG--GCTAGTAATACAAAGGAAAGAAAGAGAAACAGATAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX901408       --> CTATACAAGGAG--GCTAGTAATACAAAGGAAAGAAAGAGAAACAGATAC  Raphanus sativus cv Early Scarlet Globe
EV570640       --> CTATACAAGGAGAGGCTAGTAATACAAAGGAAAGAAAGAGAAACAGATAC  Raphanus raphanistrum subsp. landra
FD566441       --> CTATACAAGGAGAGGCTAGTAATACAAAGGAAAGAAAGAGAAACAGATAC  Raphanus sativus var. oleiformis
EV530343       --> CTATACAAGGAG--GCTAGTAATACAAAGGAAAGAAAGAGAAACAGATAC  Raphanus raphanistrum subsp. maritimus

               151    -    201
UN13495        --> AAGAAAGGAAGGTCGTGTTTATATAAGTTGAACAGCTGCAATTGCAGGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV525660       <-- AAGAAAGGAAGGTCGTGTTTATATAAGTTGAACAGCTGCAATTGCAGGAA
FD562567       <-- A-GAAAG-AA-GTCGTGTT-ATATA-G-TGAACAGCTGCAATTGCAGGAA
EY913001       <-- AAGAAAGGAAGGTCGTGTTTATATAAGTTGAACAGCTGCAATTGCAGGAA
EX762361       <-- AAGAAAGGAAGGTCGTGTT-ATATAAGT-GAACAGCTGCAATTGCAGGAA
EV565328       <-- AAGAAAGGAAGGTCGTGTTTATATAAGTTGAACAGCTGCAATTGCGGGAA
EW717039       <-- .............CGTGTT-ATATAAGT-GAACAGCTGCAATTGCAGGAA
EW726907       <-- .......................................AATTGCAG-AA
EW726177       <-- ...................cgtgttatatagtgacagcgcATTGCA-GAA
EV565329       <-- ..................................................
EX773764       <-- ..................................................
EV524734       <-- ..................................................
EY900342       <-- ..................................................
FD551260       <-- ..................................................
EX897686       <-- ..................................................
EV529662       --> AAGAAAGGAAGGTCGTGTTTATATAAGTTGAACAGCTGCAATTGCAGGAA
FD547156       --> AAGAAAGGAAGGTCGTGTTTATATAAGTTGAACAGCTGCAATTGCAGGAA
EW729584       --> AAGAAAGGAAGGTCGTGTTTATATAAGTTGAACAGCTGCAATTGCAGGAA
EX766633       --> AAGAAAGGAAGGTCGTGTTTATATAAGTTGAACAGCTGCAATTGCAGGAA
EX777586       --> AAGAAAGGAAGGTCGTGTTTATATAAGTTGAACAGCTGCAATTGCAGGAA
EY895907       --> AAGAAAGGAAGGTCGTGTTTATATAAGTTGAACAGCTGCAATTGCAGGAA
EY909316       --> AAGAAAGGAAGGTCGTGTTTATATAAGTTGAACAGCTGCAATTGCAGGAA
EX901408       --> AAGAAAGGAAGGTCGTGTTTATATAAGTTGAACAGCTGCAATTGCAGGAA
EV570640       --> AAGAAAGGAAGGTCGTGTTTATATAAGTTGAACAGCTGCAATTGCGGGAA
FD566441       --> AAGAAAGGAAGGTCGTGTTTATATAAGTTGAACAGCTGCAATTGCAGGAA
EV530343       --> AAGAAAGGAAGGTCGTGTTTATATAAGTTGAACAGCTGCAATTGCAGGAA

               201    -    251
UN13495        --> TTTTCTCTCTGAGTTTCTGAGTTACCGCTACTCGTACTGTCATGACTCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV525660       <-- TTTTCTCTCTGAGTTTCTGAGTTACCGCTACTCGTACTGTCATGACTCCA  Raphanus raphanistrum subsp. maritimus
FD562567       <-- TTT-CTCTCTGAGTT-CTGAGT-ACCGCTACTCGTACTGTCATGACTCCA  Raphanus sativus var. oleiformis
EY913001       <-- TTTTCTCTCTGAGTTTCTGAGTTACTGCTACTCGTACTGTCATGACTCCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX762361       <-- TTT-CTCTCTGAGTTTCTGAGTTACTGCTACTCGTACTGTCATGACTCCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV565328       <-- TTTTCTCTCTGAGTTTCTGAGTTACCGCTACTCGTACTGTCATGACTCCA  Raphanus raphanistrum subsp. landra
EW717039       <-- TTT-CTCTCTGAGTTTCTGAGTTACCGCTACTCGTACTGTCATGACTCCA  Raphanus sativus var. oleiformis
EW726907       <-- TTT-CTCTCTGAGTTTCTGAGT-ACCGCTACTCGTACTGTCATGACTCCA  Raphanus sativus cv Early Scarlet Globe
EW726177       <-- TTT-CTCTCTGAGTT-CTGAGT-ACCGCTACTCGTACTGTCAT-ACTCCA  Raphanus sativus cv Early Scarlet Globe
EV565329       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX773764       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV524734       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY900342       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD551260       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX897686       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV529662       --> TTTTCTCTCTGAGTTTCTGAGTTACCGCTACTCGTACTGTCATGACTCCA  Raphanus raphanistrum subsp. maritimus
FD547156       --> TTTTCTCTCTGAGTTTCTGAGTTACTGCTACTCGTACTGTCATGACTCCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW729584       --> TTTTCTCTCTGAGTTTCTGAGTTACCGCTACTCGTACTGTCATGACTCCA  Raphanus sativus cv Early Scarlet Globe
EX766633       --> TTTTCTCTCTGAGTTTCTGAGTTACTGCTACTCGTACTGTCATGACTCCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX777586       --> TTTTCTCTCTGAGTTTCTGAGTTACCGCTACTCGTACTGTCATGACTCCA  Raphanus raphanistrum subsp. landra
EY895907       --> TTTTCTCTCTGAGTTTCTGAGTTACCGCTACTCGTACTGTCATGACTCCA  Raphanus raphanistrum subsp. maritimus
EY909316       --> TTTTCTCTCTGAGTTTCTGAGTTACTGCTACTCGTACTGTCATGACTCCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX901408       --> TTTTCTCTCTGAGTTTCTGAGTTACCGCTACTCGTACTGTCATGACTCCA  Raphanus sativus cv Early Scarlet Globe
EV570640       --> TTTTCTCTCTGAGTTTCTGAGTTACCGCTACTCGTACTGTCATGACTCCA  Raphanus raphanistrum subsp. landra
FD566441       --> TTTTCTCTCTGAGTTTCTGAGTTACCGCTACTCGTACTGTCATGACTCCA  Raphanus sativus var. oleiformis
EV530343       --> TTTTCTCTCTGAGTTTCTGAGTTACCGCTACTCGTACTGTCATGACTCCA  Raphanus raphanistrum subsp. maritimus

               251    -    301
UN13495        --> GCAGCAGGTCCTGTGATTCTTATCTTCACGATCGGCTCTTCGATCTCCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV525660       <-- GCAGCAGGTCCTGTGATTCTTATCTTCACGATCGGCTCTTCGATCTCCAC
FD562567       <-- GCAGCAGGTC-TGTGATTCTTATCTTCACGATCGGCTCTTCGATCTCCAC
EY913001       <-- GCAGCAGGTCCTGTGATTCTTATCTTCACGATCGGCTCTTCGATCTCCAC
EX762361       <-- GCAGCAGGTCCTGTGATTCTTATCTTCACGATCGGCTCTTCGATCTCCAC
EV565328       <-- GCAGCAGGTCCTGTGATTCTTATCTTCACGATCGGCTCTTCGATCTCCAC
EW717039       <-- GCAGCAGGTCCTGTGATTCTTATCTTCACGATAGGCTCTTCGATCTCCAC
EW726907       <-- GCAGCAGGTC-TGTGATTCTTATCTTCACGATCGGCTCTTCGATCTCCAC
EW726177       <-- GCAGCAGGTACTGTGATTCTTATCTTCACGATCGGCTCTTCGATCTCCAC
EV565329       <-- .............TGATTCTTATCTTCACGATCGGCTCTTCGATCTCCAC
EX773764       <-- ..............GATTCT-ATCTTCACGATCGGCTCTTCGATCTCCAC
EV524734       <-- ..................................................
EY900342       <-- ..................................................
FD551260       <-- ..................................................
EX897686       <-- ..................................................
EV529662       --> GCAGCAGGTCCTGTGATTCTTATCTTCACGATCGGCTCTTCGATCTCCAC
FD547156       --> GCAGCAGGTCCTGTGATTCTTATCTTCACGATCGGCTCTTCGATCTCCAC
EW729584       --> GCAGCAGGTCCTGTGATTCTTATCTTCACGATCGGCTCTTCGATCTCCAC
EX766633       --> GCAGCAGGTCCTGTGATTCTTATCTTCACGATCGGCTCTTCGATCTCCAC
EX777586       --> GCAGCAGGTCCTGTGATTCTTATCTTCACGATCGGCTCTTCGATCTCCAC
EY895907       --> GCAGCAGGTCCTGTGATTCTTATCTTCACGATCGGCTCTTCGATCTCCAC
EY909316       --> GCAGCAGGTCCTGTGATTCTTATCTTCACGATCGGCTCTTCGATCTCCAC
EX901408       --> GCAGCAGGTCCTGTGATTCTTATCTTCACGATCGGCTCTTCGATCTCCAC
EV570640       --> GCAGCAGGTCCTGTGATTCTTATCTTCACGATCGGCTCTTCGATCTCCAC
FD566441       --> GCAGCAGGTCCTGTGATTCTTATCTTCACGATCGGCTCTTCGATCTCCAC
EV530343       --> GCAGCAGGTCCTGTGATTCTTATCTTCACGATCGGCTCTTCGATCTCCAC

               301    -    351
UN13495        --> C-AGCTCAAGCGACCCATCAGCTGTTCCAATTAAGTAAGGCCTGATCTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV525660       <-- C-AGCTCAAGCGACCCATCAGCTGTTCCAATTAAGTAAGGCCTGATCTCT  Raphanus raphanistrum subsp. maritimus
FD562567       <-- C-AGCTCAAGCGACCCATCAGCTGTTCCAATTAAGTAAGGCCTGATCTCT  Raphanus sativus var. oleiformis
EY913001       <-- C-AGCTCAAGCGACCCATCAGCTGTTCCAATTAAGTAAGGCCTGATTTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX762361       <-- C-AGCTCAAGCGACCCATCAGCTGTTTCAATTAAGTAAGGCCTGATTTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV565328       <-- C-AGCTCAAGCGACCCATCAGCTGTTCCAATTAAGTAAGGCCTGATCTCT  Raphanus raphanistrum subsp. landra
EW717039       <-- CCAGCTCAAGCGACCCATCAGCTGTTCCAATTAAGTAAGGCCTGATCTCT  Raphanus sativus var. oleiformis
EW726907       <-- C-AGCTCAAGCGACCCATCAGCTGTTCCAATTAAGTAAGGCCTGATCTCT  Raphanus sativus cv Early Scarlet Globe
EW726177       <-- C-AGCTCAAGCGACCCATCAGCTGTTCCAATTAAGTAAGGC-TGATCTCT  Raphanus sativus cv Early Scarlet Globe
EV565329       <-- C-AGCTCAAGCGACCCATCAGCTGTTCCAATTAAGTAAGGCCTGATCTCT  Raphanus raphanistrum subsp. landra
EX773764       <-- C-AGCTCAAGCGACCCATCAGCTGTTCCAATTAAGTAAGGCGTGATCTCT  Raphanus raphanistrum subsp. landra
EV524734       <-- .............................................TCTCT  Raphanus raphanistrum subsp. maritimus
EY900342       <-- .............................................TCTCT  Raphanus raphanistrum subsp. maritimus
FD551260       <-- .............................................ttTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX897686       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV529662       --> C-AGCTCAAGCGACCCATCAGCTGTTCCAATTAAGTAAGGCCTGATCTCT  Raphanus raphanistrum subsp. maritimus
FD547156       --> C-AGCTCAAGCGACCCATCAGCTGTTCCAATTAAGTAAGGCCTGATTTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW729584       --> C-AGCTCAAGCGACCCATCAGCTGTTCCAATTAAGTAAGGCCTGATCTCT  Raphanus sativus cv Early Scarlet Globe
EX766633       --> C-AGCTCAAGCGACCCATCAGCTGTTTCAATTAAGTAAGGCCTGATTTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX777586       --> C-AGCTCAAGCGACCCATCAGCTGTTCCAATTAAGTAAGGCCTGATCTCT  Raphanus raphanistrum subsp. landra
EY895907       --> C-AGCTCAAGCGACCCATCAGCTGTTCCAATTAAGTAAGGCCTGATCTCT  Raphanus raphanistrum subsp. maritimus
EY909316       --> C-AGCTCAAGCGACCCATCAGCTGTTCCAATTAAGTAAGGCCTGATTTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX901408       --> C-GGCTCAAGCGACCCATCAGCTGTTCCAATTAAGTAAGGCCTGATCTCT  Raphanus sativus cv Early Scarlet Globe
EV570640       --> C-AGCTCAAGCGACCCATCAGCTGTTCCAATTAAGTAAGGCCTGATCTCT  Raphanus raphanistrum subsp. landra
FD566441       --> C-AGCTCAAGCGACCCATCAGCTGTTCCAATTAAGTAAGGCCTGATCTCT  Raphanus sativus var. oleiformis
EV530343       --> C-AGCTCAAGCGACCCATCAGCTGTTCCAATTAAGTAAGGCCTGATCTCT  Raphanus raphanistrum subsp. maritimus

               351    -    401
UN13495        --> TCCAGCACCTTTTCAATGTTTTCGTCATTGAGTTCAAGGCCAGTCTCTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV525660       <-- TCCAGCACCTTTTCAATGTTTTCGTCATTGAGTTCAAGGCCAGTCTCTTC
FD562567       <-- TCCAGCACCTTTTCAATGTTTTCGTCATTGAGTTCAAGGCCAGTCTCTTC
EY913001       <-- TCCAGCACCTTTTCAATGTTTTCGTCATTGAGTTCAAGGCCAGTCTCTTC
EX762361       <-- TCCAGCACCTTTTCAATGTTTTCGTCATTGAGTTCAAGGCCAGTCTCTTC
EV565328       <-- TCCAGCACCTTTTCAATGTTTTCGTCATTGAGTTCAAGGCCAGTCTCTTC
EW717039       <-- TCCAGCACCTTTTCAATGTTTTCGTCATTGAGTTCAAGGCCAGTCTCTTC
EW726907       <-- TCCAGCACCTTTTCAATGTTTTCGTCATTGAGTTCAAGGCCAGTCTCTTC
EW726177       <-- TCCAGCACCTTTTCAATGTTTTCGTCATTGAGTTCAAGGCCAGTCTCTTC
EV565329       <-- TCCAGCACCTTTTCAATGTTTTCGTCATTGAGTTCAAGGCCAGTCTCTTC
EX773764       <-- TCCAGCACCTTTTCAATGTTTTCGTCATTGAGTTCAAGGCCAGTCTCTTC
EV524734       <-- TCCAGCACCTTTTCAATGTTTTCGTCATTGAGTTCAAGGCCAGTCTCTTC
EY900342       <-- TCCAGCACCTTTTCAATGTTTTCGTCATTGAGTTCAAGGCCAGTCTCTTC
FD551260       <-- TCCAGCACCTTTTCAATGTTTTCGTCATTGAGTTCAAGGCCAGTCTCTTC
EX897686       <-- ...........................................TCTCTTC
EV529662       --> TCCAGCACCTTTTCAATGTTTTCGTCATTGAGTTCAAGGCCAGTCTCTTC
FD547156       --> TCCAGCACCTTTTCAATGTTTTCGTCATTGAGTTCAAGGCCAGTCTCTTC
EW729584       --> TCCAGCACCTTTTCAATGTTTTCGTCATTGAGTTCAAGGCCAGTCTCTTC
EX766633       --> TCCAGCACCTTTTCAATGTTTTCGTCATTGAGTTCAAGGCCAGTCTCTTC
EX777586       --> TCCAGCACCTTTTCAATGTTTTCGTCATTGAGTTCAAGGCCAGTCTCTTC
EY895907       --> TCCAGCACCTTTTCAATGTTTTCGTCATTGAGTTCAAGGCCAGTCTCTTC
EY909316       --> TCCAGCACCTTTTCAATGTTTTCGTCATTGAGTTCAAGGCCAGTCTCTTC
EX901408       --> TCCAGCACCTTTTCAATGTTTTCGTCATTGAGTTCAAGGCCAGTCTCTTC
EV570640       --> TCCAGCACCTTTTCAATGTTTTCGTCATTGAGTTCAAGGCCAGTCTCTTC
FD566441       --> TCCAGCACCTTTTCAATGTTTTCGTCATTGAGTTCAAGGCCAGTCTCTTC
EV530343       --> TCCAGCACCTTTTCAATGTTTTCGTCATTGAGTTCAAGGCCAGTCTCTTC

               401    -    451
UN13495        --> ATCTGGAACTGATTCGACAGCCACAATCTCAGGTATCTTTTCCATAAGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV525660       <-- ATCTGGAACTGATTCGACAGCCACAATCTCAGGTATCTTTTCCATAAGGC
FD562567       <-- ATCTGGAACTGATTCGACAGCCACAATCTCAGGTATCTTTTCCATAAGGC
EY913001       <-- ATCTGGAACTGATTCGACAGCCACAATCTCAGGTATCTTTTCCATAAGGC
EX762361       <-- ATCTGGAACCGATTCGACAGCCACAATCTCAGGTATCTTTCCCATAAGGC
EV565328       <-- ATCTGGAACTGATTCGACAGCCACAATCTCAGGTATCTTTTCCATAAGGC
EW717039       <-- ATCTGGAACTGATTCGACAGCCACAATCTCAGGTATCTTTTCCATAAGGC
EW726907       <-- ATCTGGAACTGATTCGACAGCCACAATCTCAGGTATCTTTTCCATAAGGC
EW726177       <-- ATCTGGAACTGATTCGACAGCCACAATCTCAGGTATCTTTTCCATAAGGC
EV565329       <-- ATCTGGAACTGATTCGACAGCCACAATCTCAGGTATCTTTTCCATAAGGC
EX773764       <-- ATCTGGAACTGATTCGACAGCCACAATCTCAGGTATCTTTTCCATAAGGC
EV524734       <-- ATCTGGAACTGATTCGACAGCCACAATCTCAGGTATCTTTTCCATAAGGC
EY900342       <-- ATCTGGAACTGATTCGACAGCCACAATCTCAGGTATCTCTTCCATAAGGC
FD551260       <-- ATCTGGAACTGATTCGACAGCCACAATCTCAGGTATCTTTTCCATAAGGC
EX897686       <-- ATCTGGAACTGATTCGACAGCCACAATCTCAGGTATCTTTTCCATAAGGC
EV529662       --> ATCTGGAACTGATTCGACAGCCACAATCTCAGGTATCTTTTCCATAAGGC
FD547156       --> ATCTGGAACTGATTCGACAGCCACAATCTCAGGTATCTTTTCCATAAGGC
EW729584       --> ATCTGGAACTGATTCGACAGCCACAATCTCAGGTATCTTTTCCATAAGGC
EX766633       --> ATCTGGAACCGATTCGACAGCCACAATCTCAGGTATCTTTCCCATAAGGC
EX777586       --> ATCTGGAACTGATTCGACAGCCACAATCTCAGGTATCTTTTCCATAAGGC
EY895907       --> ATCTGGAACTGATTCGACAGCCACAATCTCAGGTATCTCTTCCATAAGGC
EY909316       --> ATCTGGAACTGATTCCACAGCCACAATCTCAGGTATCTTTTCCATAAGGG
EX901408       --> ATCTGGAACTGATTCGACAGCCACAATCTCAGGTATCTTTTCCATAAGGC
EV570640       --> ATCTGGAACTGATTCGACAGCCACAATCTCAGGTATCTTTTCCATAAGGC
FD566441       --> ATCTGGAACTGATTCGACAGCCACAATCTCAGGTATCTTTTCCATAAGGC
EV530343       --> ATCTGGAACTGATTCGACAGCCACAATCTCAGGTATCTTTTCCATAAGGC

               451    -    501
UN13495        --> GACGCTCAATACCCATTTTCATAGTCATAACAGAACTTGGGCATGACCCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV525660       <-- GACGCTCAATACCCATTTTCATAGTCATAACAGAACTTGGGCATGACCCG
FD562567       <-- GACGCTCAATGCCCATTTTCATAGTCATAACAGAACTTGGGCATGACCCG
EY913001       <-- GACGCTCAATACCCATTTTCATAGTCATAACAGAACTTGGGCATGACCCG
EX762361       <-- GACGCTCAATACCCATTTTCATAGTCATAACAGAACTTGGGCATGACCCG
EV565328       <-- GACGCTCAATACCCATTTTCATAGTCATAACAGAACTTGGGCATGACCCG
EW717039       <-- GACGCTCAATACCCATTTTCATAGTCATAACAGAACTTGGGCATGACCCG
EW726907       <-- GACGCTCAATACCCATTTTCATAGTCATAACAGAACTTGGGCATGACCCG
EW726177       <-- GACGCTCAATACCCATTTTCATAGTCATAACAGAACTTGGGCATGACCCG
EV565329       <-- GACGCTCAATACCCATTTTCATAGTCATAACAGAACTTGGGCATGACCCG
EX773764       <-- GACGCTCAATACCCATTTTCATAGTCATAACAGAACTTGGGCATGACCCG
EV524734       <-- GACGCTCAATACCCATTTTCATAGTCATAACAGAACTTGGGCATGACCCG
EY900342       <-- GACGCTCAATACCCATTTTCATAGTCATAACAGAACTTGGGCATGACCCG
FD551260       <-- GACGCTCAATACCCATTTTCATAGTCATAACAGAACTTGGGCATGACCCG
EX897686       <-- GACGCTCAATACCCATTTTCATAGTCATAACAGAACTTGGGCATGACCCG
EV529662       --> GACGCTCAATACCCATTTTCATAGTCATAACAGAACTTGGGCATGACCCG
FD547156       --> GACGCTCAATACCCATTTTCATAGTCATAACAGAACTTGGGCATGACCCG
EW729584       --> GACGCTCAATACCCATTTTCATAGTCATAACAGAACTTGGGCATGACCCG
EX766633       --> GACGCTCAATACCCATTTTCATAGTCATAACAGAACTTGGGCATGACCCG
EX777586       --> GACGCTCAATACCCATTTTCATAGTCATAACAGAACTTGGGCATGACCCG
EY895907       --> GACGCTCAATACCCATTTTCATAGTCATAACAGAACTTGGGCATGACCCG
EY909316       --> GACGCTCAATACCCATTTTCATAGTCATAACAGAACTTGGGCATGACCCG
EX901408       --> GACGCTCAATACCCATTTTCATAGTCATAACAGAACTTGGGCATGACCCG
EV570640       --> GACGCTCAATACCCATTTTCATAGTCATAACAGAACTTGGGCATGACCCG
FD566441       --> GACGCTCAATGCCCATTTTCATAGTCATAACAGAACTTGGGCATGACCCG
EV530343       --> GACGCTCAATACCCATTTTCATAGTCATAACAGAACTTGGGCATGACCCG

               501    -    551
UN13495        --> CAAGCTCCCTGCAATTTGACTCGCACAATATTTCCATCGATCTCATGTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV525660       <-- CAAGCTCCCTGCAATTTGACTCGCACAATATTTCCATCGATCTCATGTAA
FD562567       <-- CAAGCTCCCTGCAATTTGACTCGCACAATATTTCCATCGATCTCATGTAA
EY913001       <-- CAAGCTCCCTGCAATTTGACTCGCACAATATTTCCATCGATCTCATGTAA
EX762361       <-- CAAGCTCCCTGCAATTTGACTCGCACAATATTTCCATCGATCTCATGTAA
EV565328       <-- CAAGCTCCCTGCAATTTGACTCGCACAATATTTCCATCGATCTCATGTAA
EW717039       <-- CAAGCTCCCTGCAATTTGACTCGCACAATATTTCCATCGATCTCATGTAA
EW726907       <-- CAAGCTCCCTGCAATTTGACTCGCACAATATTTCCATCGATCTCATGTAA
EW726177       <-- CAAGCTCCCTGCAATTTGACTCGCACAATATTTCCATCGATCTCATGTAA
EV565329       <-- CAAGCTCCCTGCAATTTGACTCGCACAATATTTCCATCGATCTCATGTAA
EX773764       <-- CAAGCTCCCTGCAATTTGACTCGCACAATATTTCCATCGATCTCATGCAA
EV524734       <-- CAAGCTCCCTGCAATTTGACTCGCACAATATTTCCATCGATCTCATGTAA
EY900342       <-- CAAGCTCCCTGCAATTTGACTCGCACAATATTTCCATCGATCTCATGTAA
FD551260       <-- CAAGCTCCCTGCAATTTGACTCGCACAATATTTCCATCGATCTCATGTAA
EX897686       <-- CAAGCTCCCTGCAATTTGACTCGCACAATATTTCCATCGATCTCATGTAA
EV529662       --> CAAGCTCCCTGCAATTTGACTCGCACAATATTTCCATCGATCTCATGTAA
FD547156       --> CAAGCTCCCTGCAATTTGACTCGCACAATATTTCCATCGATCTCATGTAA
EW729584       --> CAAGCTCCCTGCAATTTGACTCGCACAATATTTCCATCGATCTCATGTAA
EX766633       --> CAAGCTCCCTGCAATTTGACTCGCACAATATTTCCATCGATCTCATGTAA
EX777586       --> CAAGCTCCCTGCAATTTGACTCGCACAATATTTCCATCGATCTCATGCAA
EY895907       --> CAAGCTCCCTGCAATTTGACTCGCACAATATTTCCATCGATCTCATGTAA
EY909316       --> CAAGCTCCCTGCAATTTGACTCGCACAATATTTCCATCGATCTCATGTAA
EX901408       --> CAAGCTCCCTGCAATTTGACTCGCACAATATTTCCATCGATCTCATGTAA
EV570640       --> CAAGCTCCCTGCAATTTGACTCGCACAATATTTCCATCGATCTCATGTAA
FD566441       --> CAAGCTCCCTGCAATTTGACTCGCACAATATTTCCATCGATCTCATGTAA
EV530343       --> CAAGCTCCCTGCAATTTGACTCGCACAATATTTCCATCGATCTCATGTAA

               551    -    601
UN13495        --> TGCCACATTACCACCATCAGACATGAGGTATGGTCTGATTTCGTCCAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV525660       <-- TGCCACATTACCACCATCAGACATGAGGTATGGTCTGATTTCGTCCAGAA
FD562567       <-- TGCCACATTACCACCATCAGACATGAGGTATGGTCTGATTTCGTCCAGAA
EY913001       <-- TGCCACATTACCACCATCAGACATGAGGTATGGTCTGATTTCGTCCAGAA
EX762361       <-- TGCCACATTACCACCATCAGACATGAGGTATGGTCTGATTTCGTCCAGAA
EV565328       <-- TGCCACATTACCACCATCAGACATGAGGTAAGGTCTGATTTCGTCCAGAA
EW717039       <-- TGCCACATTACCACCATCAGACATGAGGTATGGTCTGATTTCGTCCAGAA
EW726907       <-- TGCCACATTACCACCATCAGACATGAGGTATGGTCTGATTTCGTCCAGAA
EW726177       <-- TGCCACATTACCACCATCAGACATGAGGTATGGTATGATTTCGTCCAGAA
EV565329       <-- TGCCACATTACCACCATCAGACATGAGGTAAGGTCTGATTTCGTCCAGAA
EX773764       <-- TGCCACATTACCACCATCAGACATGAGGTATGGTCTGATTTCGTCCAGAA
EV524734       <-- TGCCACATTACCACCATCAGACATGAGGTATGGTCTGATTTCGTCCAGAA
EY900342       <-- TGCCACATTACCACCATCAGACATGAGGTATGGTCTGATTTCGTCCAGAA
FD551260       <-- TGCCACATTACCACCATCAGACATGAGGTATGGTCTGATTTCGTCCAGAA
EX897686       <-- TGCCACATTACCACCATCAGACATGAGGTATGGTCTGATTTCGTCCAGAA
EV529662       --> TGCCACATTACCACCATCAGACATGAGGTATGGTCTGATTTCGTCCAGAA
FD547156       --> TGCCACATTACCACCATCAGACATGAGGTATGGTCTGATTTCGTCCAGAA
EW729584       --> TGCCACATTACCACCATCAGACATGAGGTATGGTCTGATTTCGTCCAGAA
EX766633       --> TGCCACATTACCACCATCAGACATGAGGTATGGTCTGATTTCGTCCAGAA
EX777586       --> TGCCACATTACCACCATCAGACATGAGGTATGGTCTGATTTCGTCCAGAA
EY895907       --> TGCCACATTACCACCATCAGACATGAGGTATGGTCTGATTTCGTCCAGAA
EY909316       --> TGCCACATTACCACCATC................................
EX901408       --> TGCCACATTACCACCATCAGACATGAGGTATGGTCTGATTTCGTCCAGAA
EV570640       --> TGCCACATTACCACCATCAGACATGAGGTAAGGTCTGATTTCGTCCAGAA
FD566441       --> TGCCACATTACCACCATCAGACATGAGGTATGGTCTGAT...........
EV530343       --> TGCCACATTACCACCATCAGACATGAGGTATGGTCTGATTTCGTCCAGAA

               601    -    651
UN13495        --> CGCTCTCTACATTTTCCTCAGTCAGGGGTACTTCCAACAGTGGGTCTGGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV525660       <-- CGCTCTCTGCATTTTCCTCAGTCAGGGGTACTTCCAACAGTGGGTCTGGG
FD562567       <-- CGCTCTCTACATTTTCCTCAGTCAGGGGTACTTCCAACAGTGGGTCTGGG
EY913001       <-- CGCTCTCTACATTTTCCTCAGTCAGGGGTACTTCCAACAGTGGGTCTGGG
EX762361       <-- CGCTCTCTACATTTTCCTCAGTCAGGGGTACTTCCAACAGTGGGTCTGGG
EV565328       <-- CGCTCTCTACATTTTCCTCAGTCAGGGGTACTTCCAACAGTGGGTCTGGG
EW717039       <-- CGCTCTCTACATTTTCCTCAGTCAGGGGTACTTCCAACAGTGGGTCTGGG
EW726907       <-- CGCTCTCTACATTTTCCTCAGTCAGGGGTACTTCCAACAGTGGGTCTGGG
EW726177       <-- CGCTCTCTACATTTTCCTCAGTCAGGGGTACTTCCAACAGTGGGTCTGGG
EV565329       <-- CGCTCTCTACATTTTCCTCAGTCAGGGGTACTTCCAACAGTGGGTCTGGG
EX773764       <-- CGCTCTCTACATTTTCCTCAGTCAGGGGTACTTCCAACAGTGGGTCTGGG
EV524734       <-- CGCTCTCTACATTTTCCTCAGTCAGGGGTACTTCCAACAGTGGGTCTGGG
EY900342       <-- CGCTCTCTACATTTTCCTCAGTCAGGGGTACTTCCAACAGTGGGTCTGGG
FD551260       <-- CGCTCTCTACATTTTCCTCAGTCAGGGGTACTTCCAACAGTGGGTCTGGG
EX897686       <-- CGCTCTCTACATTTTCCTCAGTCAGGGGTACTTCCAACAGTGGGTCTGGG
EV529662       --> CGCTCTCTACATTTTCCTCAGTCAGGGGTACTTCCAACAGTGGGTCTGGG
FD547156       --> CGCTCTCTACATTTTCCTCAGTCAGGGGTACTTCCAACAGTGGGTCTGGG
EW729584       --> CGCTCTCTACATTTTCCTCAGTCAGGGGTACTTCCAACAGTGGGTCTGGG
EX766633       --> CGCTCTCTACATTTTCCTCAGTCAGGGGTACTTCCAACAGTGGGTCTGGG
EX777586       --> CGCTCTCTACATTTTCCTCAGTCAGGGGTACTTCCAACAGTGGGTCTGGG
EY895907       --> CGCTCTCTACATTTTCCTCAGTCAGGGGTACTTCCAACAGTGGGTCTGGG
EY909316       --> ..................................................
EX901408       --> CGCTCTCTACATTTTCCTCAGTCAGGGGTACTTCCAACAGTGGGTCTGGG
EV570640       --> CGCTCTCTACATTTTCCTCAGTCAGGGGTACTTCCAACAGTGGGTCTGGG
FD566441       --> ..................................................
EV530343       --> CGCTCTCTGCATTTTCCTCAGTCAGGGGTACTTCCAACAGTGGGTCTGGG

               651    -    701
UN13495        --> GTTGCCACTGCCTTTACAACTTGAGATGGAGATAATCCTCGGAACCGGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV525660       <-- GTTGCCACTGCCTTTACAACTTGAGATCGAGATAATCCTCGGcc......  Raphanus raphanistrum subsp. maritimus
FD562567       <-- GTTGCCACTGCCTTTACAACTTGAGATCGAGATAATCCTCGGAATCGGTG  Raphanus sativus var. oleiformis
EY913001       <-- GTTGCCACTGCCTTTACAACTTGAGATGGAGATAATCCTCGGAACCGGTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX762361       <-- GTTGCCACTGCCTTTACAACTTGAGATGGAGATAATCCTCGGAACCGGTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV565328       <-- GTTGCCACTGCCTTTACAACTTGAGATGGAGATAATCCTCGGAACCGGTG  Raphanus raphanistrum subsp. landra
EW717039       <-- GTTGCCACTGCCTTTACAACTTGAGATCGAGATAATCCTCGGAATCGGTG  Raphanus sativus var. oleiformis
EW726907       <-- GTTACCACTGCCTTTACAACTTGAGATGGAGATAATCCTCGGAACCGGTG  Raphanus sativus cv Early Scarlet Globe
EW726177       <-- GTTGCCACTGCCTTTACAACTTGAGATGGAGATAATCCTCGGAACCGGTG  Raphanus sativus cv Early Scarlet Globe
EV565329       <-- GTTGCCACTGCCTTTACAACTTGAGATGGAGATAATCCTCGGAACCGGTG  Raphanus raphanistrum subsp. landra
EX773764       <-- GTTGCCACTGCCTTTACAACTTGAGATGGAGATAATCCTCGGAACCGGTG  Raphanus raphanistrum subsp. landra
EV524734       <-- GTTGCCACTGCCTTTACAACTTGAGATCGAGATAATCCTCGGAATCGGTG  Raphanus raphanistrum subsp. maritimus
EY900342       <-- GTTGCCACTGCCTTTACAACTTGAGATCGAGATAATCCTCGGAATCGGTG  Raphanus raphanistrum subsp. maritimus
FD551260       <-- GTTGCCACTGCCTTTACAACTCGAGGTGGAGATAATCCTCGGAACCGGTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX897686       <-- GTTGCCACTGCCTTTACAACTTGAGATGGAGATAATCCTCGGAACCGGTG  Raphanus sativus cv Early Scarlet Globe
EV529662       --> GTTGCCACTGCCTTTACAACTTGAGATCGAGATAATCCTCGGAATCGGTG  Raphanus raphanistrum subsp. maritimus
FD547156       --> GTTGCCACTGCCTTTACAACTCGAGGTGGAGATAATCCTCGGAACCGGTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW729584       --> GTTACCACTGCCTTTACAACTTGAGATGGAGATAATCCTCGGAACCGGTG  Raphanus sativus cv Early Scarlet Globe
EX766633       --> GTTGCCACTGCCTTTACAACTTGAGATGGAGATAATCCTCGGAACCGGTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX777586       --> GTTGCCACTGCCTTTACAACTTGAGATGGAGATAATCCTCGGAACCGGTG  Raphanus raphanistrum subsp. landra
EY895907       --> GTTGCCACTGCCTTTACAACTTGAGATCGAGATAATCCTCGGAATCGGTG  Raphanus raphanistrum subsp. maritimus
EY909316       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX901408       --> GTTGCCACTGCCTTTACAACTTGAGATGGAGATAATCCTCGGAACCGGTG  Raphanus sativus cv Early Scarlet Globe
EV570640       --> GTTGCCACTGCCTTTACAACTTGAGATGGAGATAATCCTCGGAACCGGTG  Raphanus raphanistrum subsp. landra
FD566441       --> ..................................................  Raphanus sativus var. oleiformis
EV530343       --> GTTGCCACTGCCTTTACAACTTGAGATCGAGATAATCCTCGGcc......  Raphanus raphanistrum subsp. maritimus

               701    -    751
UN13495        --> ACGAGGCCTAGCTAGGACTAGGAGACCAAAAGCGCGATGAGAGCTCAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV525660       <-- ..................................................
FD562567       <-- ACGAGGCCTAGCTAGGACTAGGAGACCAAAAGCGCGATGAGAGCTCAAAA
EY913001       <-- ACGAGGCCTAGCTAGGACTAGGAGACCAAAAGCGCGATGAGAGCTCAAAA
EX762361       <-- ACGAGGCCTAGCTAGGACTAGGAGACCAAAAGCGCGATGAGAGCTCAAAA
EV565328       <-- ACGAGGCCTAGCTAGGACTAGGAGACCAAAAGCGCGATGAGAGCTCAAAA
EW717039       <-- ACGAGGCCTAGCTAGGACTAGGAGACCAAAAGCGCGATGAGAGCTCAAAA
EW726907       <-- ACGAGGCCTAGCCAGGACTAGGAGACCAAAAGCGCGATGAGAGCTCAAAA
EW726177       <-- ACGAGGCCTAGCTAGGACTAGGAGACCAAAAGCGCGATGAGAGCTCAAAA
EV565329       <-- ACGAGGCCTAGCTAGGACTAGGAGACCAAAAGCGCGATGAGAGCTCAAAA
EX773764       <-- ACGAGGCCTAGCTAGGACTAGGAGACCAAAAGCGCGATGAGAGCTCAAAA
EV524734       <-- ACGAGGCCTAGCTAGGACTAGGAGACCAAAAGCGCGATGAGAGCTCAAAA
EY900342       <-- ACGAGGCCTAGCTAGGACTAGGAGACCAAAAGCGCGATGAGAGCTCAAAA
FD551260       <-- ACGAGGCCTAGCTAGGACTAGGAGACCAAAAGCGCGATGAGAGCTCAAAA
EX897686       <-- ACGAGGCCTAGCTAGGACTAGGAGACCAAAAGCGCGATGAGAGCTCAAAA
EV529662       --> ACGAGGCCTAGCTAGGACTAGGAGACCAAAAGCGCGATGAGAGCTCAAAA
FD547156       --> ACGAGGCCTAGCTAGGACTAGGAGACCAAAAGCGCGATGAGAGCTCAAAA
EW729584       --> ACGAGGCCTAGCCAGGACTAGGAGACCAAAAGCGCGATGAGAGCTCAAAA
EX766633       --> ACGAGGCCTAGCTAGGACTAGGAGACCAAAAGCGCGATGAGAGCTCAAAA
EX777586       --> ACGAGGCCTAGCTAGGACTAGGAGACCAAAAGCGCGATGAGAGCTCAAAA
EY895907       --> ACGAGGCCTAGCTAGGACTAGGAGACCAAAAGCGCGATGAGAGCTCAAAA
EY909316       --> ..................................................
EX901408       --> ACGAGGCCTAGCTAGGACTAGGAGACCAAAAGCGCGATGAGAGCTCAAAA
EV570640       --> ACGAGGCCTAGCTAGGACTAGGAGACCAAAAGCGCGATGAGAGCTCAAAA
FD566441       --> ..................................................
EV530343       --> ..................................................

               751    -    801
UN13495        --> TCTGAGCAGAAGAAAGAAGACGAGAGGACGAGGAAGAGGACGGCTCGAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV525660       <-- ..................................................
FD562567       <-- TCTGAGCAGAAGAAAGAAGACGAGAGGACGAGGAAGAGGACGGCTCGAGG
EY913001       <-- TCTGAGCAGAAGAAAGAAGACGAGAGGACGAGGAAGAGGACGGCTCGAGG
EX762361       <-- TCTGAGCAGAAGAAAGAAGACGAGAGGACGAGGAAGAGGACGGCTCGAGG
EV565328       <-- TCTGAGCAGAAGAAAGAAGACGAGAGGACGAGGAAGAGGACGGCTCAAGG
EW717039       <-- TCTGAGCAGAAGAAAGAAGACGAGAGGACGAGGAAGAGGACGGCTCGAGG
EW726907       <-- TCCGAGCAGAAGAAGGAAGACGAGAGGACGAGGAAGAGGACGGCTCGAGG
EW726177       <-- TCTGAGCAGAAGAAAGAAGACGAGAGGACGAGGAAGAGGACGGCTCGAGG
EV565329       <-- TCTGAGCAGAAGAAAGAAGACGAGAGGACGAGGAAGAGGACGGCTCAAGG
EX773764       <-- TCTGAGCAGAAGAAAGAAGACGAGAGGACGAGGAAGAGGACGGCTCGAGG
EV524734       <-- TCTGAGCAGAAGAAAGAAGACGAGAGGACGAGGAAGAGGACGGCTCGAGG
EY900342       <-- TCTGAGTAGAAGAAAGAAGACGAGAGGACGAGGAAGAGGACGGCTCGAGG
FD551260       <-- TCTGAGCAGAAGAAAGAAGACGAGAGGACGAGGAAGAGGACGGCTCGAGG
EX897686       <-- TCTGAGCAGAAGAAAGAAGACGAGAGGACGAGGAAGAGGACGGCTCGAGG
EV529662       --> TCTGAGCAGAAGAAAGAAGACG............................
FD547156       --> TCTGAGCAGAAGAAAGAAGACGAGAGGACGAGGAA...............
EW729584       --> TCCGAGCAGAAGAA-GAAGACGAGAGGACGAGGA-GAGGACGGCTCGAGG
EX766633       --> TCTGAGCAGAAGAAAGAAGACGAGAGGACGAGGAAGAGGACGGCTCGAGG
EX777586       --> TCTGAGCAGAAGAAAGAAGACG............................
EY895907       --> ..................................................
EY909316       --> ..................................................
EX901408       --> TCTG..............................................
EV570640       --> TCTGAGCAGAAGAAAGAAGA..............................
FD566441       --> ..................................................
EV530343       --> ..................................................

               801    -    851
UN13495        --> CCTAGGGTTCGTGGCGCCGACA---TG---GCTGCTGAATTCAGCGCAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV525660       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD562567       <-- CCTAGAGTTCGTGGCGCCGACA---TG---GCTGCTGAATTCAGCGCAAA  Raphanus sativus var. oleiformis
EY913001       <-- CCTAGGGTTCGTGGCGCCGACA---TG---GCTGCTGGATTCAGCGCAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX762361       <-- CCTAGGGTTCGTGGCGCCGACA---TG---GCTGCTGGATTCAGCGCAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV565328       <-- CCTAGGGTTCGTGGCGCCGACA---TGATGGCTGCTGGATTCAGCGCAAA  Raphanus raphanistrum subsp. landra
EW717039       <-- CCTAGGGTTCGTGGCGCCGACA---TG---GCTGCTGAATTCAGCGCAAA  Raphanus sativus var. oleiformis
EW726907       <-- CCTAGGGTTCGTGGCGCCGACACGATG---GCTGCTGAATTCAGCGCAAA  Raphanus sativus cv Early Scarlet Globe
EW726177       <-- CCTAGGGTTCGTGGCGCCGACA---TGATGGCTGCTGAATTCAGCGCAAA  Raphanus sativus cv Early Scarlet Globe
EV565329       <-- CCTAGGGTTCGTGGCGCCGACA---TGATGGCTGCTGGATTCAGCGCAAA  Raphanus raphanistrum subsp. landra
EX773764       <-- CCTAGGGTTCGTGGCGCCGACA---TG---GCTGCTGAATTCAGCGCAAA  Raphanus raphanistrum subsp. landra
EV524734       <-- CCTAGGGTTCGTGGCGCCGACA---TG---GCTGCTGAATTCAGCGCAAA  Raphanus raphanistrum subsp. maritimus
EY900342       <-- CCTAGGGTTCGTGGCGCCGACA---TG---GCTGCTGAATTCAGCGCAAA  Raphanus raphanistrum subsp. maritimus
FD551260       <-- CCTAGGGTTCGTGGCGCCGACA---TG---GCTGCTGGATTCAGCGCAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX897686       <-- CCTAGGGTTCGTGGCGCCGACA---TGATGGCTGCTGAATTCAGCGCAAA  Raphanus sativus cv Early Scarlet Globe
EV529662       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD547156       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW729584       --> CCTAGG-TTCGTGGCGCCGACACGATG---GCTGCTG-ATTCAGCGCAA-  Raphanus sativus cv Early Scarlet Globe
EX766633       --> CCTAGG-TTCGTGGCGCCGACA---TG---GCTGCTGGATTCAGCGCAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX777586       --> ..................................................  Raphanus raphanistrum subsp. landra
EY895907       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY909316       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX901408       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EV570640       --> ..................................................  Raphanus raphanistrum subsp. landra
FD566441       --> ..................................................  Raphanus sativus var. oleiformis
EV530343       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               851    -    901
UN13495        --> CAATTGCATCTCTCCTCCACTTACCGTTTTCTGGTCGGAAAGGAAATAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV525660       <-- ..................................................
FD562567       <-- CAATTGCATCTCTCCTCCACTTACCGTTTTCc..................
EY913001       <-- CAATTGCATCTCTCCTCC................................
EX762361       <-- CAATTGCATCTCTCCTCCACTTcc..........................
EV565328       <-- CAATTGCATCTCTCCTCCACTTACCGTTTTCTGGTCGGAAAGGAAATAAA
EW717039       <-- CAATTGCATCTCTC....................................
EW726907       <-- CAATTGCATCTCTCCTCCACTTACCGTTTTCTGGTCGGAAAGGAAATAAA
EW726177       <-- CAATTGCATCTCTCCTCCACTTACCGTTTTCTGGTCGGAAAGGAAATAAA
EV565329       <-- CAATTGCATCTCTCCTCCACTTACCGTTTTCTGGTCGGAAAGGAAATAAA
EX773764       <-- CAATTGCATCTCTCCTCCACTTACCGTTTTCTGGTCGGAAAGGAAATAAA
EV524734       <-- CAATTGCATCTCTCCTCCACTTACCGTTTTCTGGTCAGAAAGGAAATAAA
EY900342       <-- CAATTGCATCTCTCCTCCACTTACCGTTTTCTGGTCGGAAAGGAAATAAA
FD551260       <-- CAATTGCATCTCTCCTCCACTTACCGTcc.....................
EX897686       <-- CAATTGCATCTCTCCTCCACTTACCGTTTTCTGGTCGGAAAGGAAATAAA
EV529662       --> ..................................................
FD547156       --> ..................................................
EW729584       --> C-ATTGCATCTCTCtcactac.............................
EX766633       --> aa................................................
EX777586       --> ..................................................
EY895907       --> ..................................................
EY909316       --> ..................................................
EX901408       --> ..................................................
EV570640       --> ..................................................
FD566441       --> ..................................................
EV530343       --> ..................................................

               901    -    951
UN13495        --> AACTCTTTTTAAGGGAGAAAGAAAACCAAATCACGACTTTGTTTCTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV525660       <-- ................................................
FD562567       <-- ................................................
EY913001       <-- ................................................
EX762361       <-- ................................................
EV565328       <-- AACTCTTTTTAAGGGAGAAAGAAAACCAAATCACGACTTTc.......
EW717039       <-- ................................................
EW726907       <-- AACTCTTTTTAAGGGAGAAAGAAAACCAAATCACGACTTTGTTTCc..
EW726177       <-- AACTCTTTTTAAGGGAGAAAGAAAACCAAATCACGACTTTccc.....
EV565329       <-- AACTCTTTTTAAGGGAGAAAGAAAACCAAATCACGACTTTc.......
EX773764       <-- AACTCTTTTTAAGGGAGAAAGAAAACCAAATCACGACTTTc.......
EV524734       <-- AACTCTTTTTAAGGGAGAAAGAAAACCAAATCACGACTTTcc......
EY900342       <-- AACTCTTTTTAAGGGAGAAAGAAAACCAAATCACcc............
FD551260       <-- ................................................
EX897686       <-- AACTCTTTTTAAGGGAGAAAGAAAACCAAATCACGACTTTGTTTCTCC
EV529662       --> ................................................
FD547156       --> ................................................
EW729584       --> ................................................
EX766633       --> ................................................
EX777586       --> ................................................
EY895907       --> ................................................
EY909316       --> ................................................
EX901408       --> ................................................
EV570640       --> ................................................
FD566441       --> ................................................
EV530343       --> ................................................