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Alignment for radish unigene UN13512

               1      -     51
UN13512        --> GGGAAGACTTTAATTAAGAGCTAAGATAAAACACAGACAGCGAAACTAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768963       <-- ..................................................
FD537536       <-- ..................................................
FD580860       <-- ..................................................
FD943801       <-- ..................................................
FD553677       <-- ..................................................
FD942543       <-- ..................................................
EX765170       --> GGGAAGACTTTAAT-AAGAGCTAAGA-AACACACAGACAGCGAAACTAGA
FD557601       --> ggaAAGACTTTAATTAAGAGCTAAGA-AACACACAGACAGCGAAACTAGA
FD576357       --> .............gggAGAGCTAAAATAAAACACAGACAGCGAAACTAGA
FD946419       --> ....ggaaagactttgAGAGCTAAAATAAAACACAGACAGCGAAACTAGA
FD947945       --> .........................ggAAAACACAGACAGCGAAACTAGA
FD973333       --> ..................................................

               51     -    101
UN13512        --> TCGGAAGCTATGGCGGATTTGGAAGATGTTCAGACCGTGGATCTCATGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768963       <-- ..................................................
FD537536       <-- ..................................................
FD580860       <-- ..................................................
FD943801       <-- ..................................................
FD553677       <-- ..................................................
FD942543       <-- ..................................................
EX765170       --> TCGGAAGCTATGGCGGATTTGGAAGATGTTCAGACCGTGGATCTCATGTC
FD557601       --> TCGGAAGCTATGGCGGATTTGGAAGATGTTCAGACCGTGGATCTCATGTC
FD576357       --> TCGGAAGCTATGGCGGATTTGGAAGATGTTCAGACCGTGGATCACATGTC
FD946419       --> TCGGAAGCTATGGCGGATTTGGAAGATGTTCAGACCGTGGATCTCATGTC
FD947945       --> TCGGAAGCTATGGCGGATTTGGAAGATGTTCAGACCGTGGATCTCATGTC
FD973333       --> ..................................................

               101    -    151
UN13512        --> CGAGCTCCTCCGCCGCCTCAAATGTTCACAGAAACCTGACAAACGCCTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768963       <-- ................................................CA
FD537536       <-- ..................................................
FD580860       <-- ..................................................
FD943801       <-- ..................................................
FD553677       <-- ..................................................
FD942543       <-- ..................................................
EX765170       --> CGAACTCCTCCGCCGTCTCAAATGTTCACAGAAACCTGACAAACGCCTCA
FD557601       --> CGAGCTCCTCCGCCGTCTCAAATGTTCACAGAAACCTGACAAACGCCTCA
FD576357       --> CGAGCTCCTCCGCCGCCTCAAATGTTCACAGAAACCTGACAAACGCCTCA
FD946419       --> CGAGCTCCTCCGCCGCCTCAAATGTTCACAGAAACCTGACAAACGCCTCA
FD947945       --> CGAGCTCCTCCGCCGCCTCAAATGTTCACAGAAACCTGACAAACGCCTCA
FD973333       --> ..................................................

               151    -    201
UN13512        --> TCTTCATAGGACCTCCAGGGTCAGGGAAAGGTACACAATCTCCAATAGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768963       <-- TCTTCATAG-ACCTCCAGG-TCAGGGAAAGGTACACAATCTCCAATAGTG
FD537536       <-- ..................................................
FD580860       <-- ..................................................
FD943801       <-- ..................................................
FD553677       <-- ..................................................
FD942543       <-- ..................................................
EX765170       --> TCTTCATAGGACCTCCAGGGTCAGGGAAAGGTACACAATCTCCAATAGTG
FD557601       --> TCTTCATAGGACCTCCAGGGTCAGGGAAAGGTACACAATCTCCAATAGTG
FD576357       --> TCTTCATAGGACCTCCAGGGTCAGGGAAAGGTACACAATCTCCAATAGTG
FD946419       --> TCTTCATAGGACCTCCAGGGTCAGGGAAAGGTACACAATCTCCAATAGTG
FD947945       --> TCTTCATAGGACCTCCAGGGTCAGGGAAAGGTACACAATCTCCAATAGTG
FD973333       --> .......................................CTCCAATGGTG

               201    -    251
UN13512        --> AAGGATGAGTTTTGCTTGTGTCATTTATCCACTGGAGATATGTTAAGAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768963       <-- AAGGATGAGCTTTGCTTGTGTCATTTATCCACTGGAGACATGTTAAGAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD537536       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD580860       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD943801       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD553677       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD942543       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX765170       --> AAGGATGAGCTTTGCTTGTGTCATTTATCCACTGGAGACATGTTAAGAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD557601       --> AAGGATGAGTTTTGCTTGTGTCATCTATCCACTGGGGACATGTTAAGAGC  Raphanus raphanistrum subsp. landra
FD576357       --> AAGGATGAGTTTTGCTTGTGTCATTTATCCACTGGAGATATGTTAAGAGC  Raphanus sativus cv Rat-Tail Radish #3870
FD946419       --> AAGGATGAGTTTTGCTTGTGTCATTTATCCACTGGAGATATGTTAAGAGC  Raphanus sativus cv Early Scarlet Globe
FD947945       --> AAGGATGAGTTTTGCTTGTGTCATTTATCCACTGGAGATATGTTAAGAGC  Raphanus sativus cv Early Scarlet Globe
FD973333       --> AAGGATGAGTTTTGCTTGTGTCATTTATCCACTGGAGATATGTTAAGAGC  Raphanus raphanistrum subsp. raphanistrum (MS)

               251    -    301
UN13512        --> TGCTGTTGCTTCTAAGACCCCTCTTGGTCTCAAAGCCAAAGAAGCTATGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768963       <-- TGCTGTTGCTTCTAAAACCCCTCTTGGTCTCAAAGCCAAAGAAGCTATGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD537536       <-- ..CTGTTGCTTCTAAGACCCCTCTTGGTCTCAAGGCCAAAGAAGCTATGG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD580860       <-- ........................TGGTCTCAAAGCCAAAGAAGCTATGG  Raphanus sativus cv Rat-Tail Radish #3870
FD943801       <-- ................................AAGCCAAAGAAGCTATGG  Raphanus sativus cv Early Scarlet Globe
FD553677       <-- .........................................AAGCTATGG  Raphanus raphanistrum subsp. landra
FD942543       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX765170       --> TGCTGTTGCTTCTAAAACCCCTCTTGGTCTCAAAGCCAAAGAAGCTATGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD557601       --> TGCTGTTGCTTCTAAAACCCCTCTTGGTCTCAAAGCCAAAGAAGCTATGG  Raphanus raphanistrum subsp. landra
FD576357       --> TGCTGTTGCTTCTAAGACCCCTCTTGGTCTCAAAGCCAAAGAAGCTATGG  Raphanus sativus cv Rat-Tail Radish #3870
FD946419       --> TGCTGTTGCTTCTAAGACCCCTCTTGGTCTCAAAGCCAAAGAAGCTATGG  Raphanus sativus cv Early Scarlet Globe
FD947945       --> TGCTGTTGCTTCTAAGACCCCTCTTGGTCTCAAAGCCAAAGAAGCTATGG  Raphanus sativus cv Early Scarlet Globe
FD973333       --> TGCTGTTGCTTCTAAGACCCCTCTTGGTCTCAAGGCCAAAGAAGCTATGG  Raphanus raphanistrum subsp. raphanistrum (MS)

               301    -    351
UN13512        --> ACACGGGAGCGCTTGTCACTGATGAATTGGTTGTTGGTATAATTGATGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768963       <-- ACATGGGAGCGCTTGTCACTGATGAATTGGTTGTTGGTATAATTGATGAA
FD537536       <-- ACACGGGAGCGCTTGTCACTGATGAATTGGTTGTTGGTATAATTGATGAA
FD580860       <-- ACACGGGAGCGCTTGTCACTGATGAATTGGTTGTTGGTATAATTGATGAA
FD943801       <-- ACACGGGAGCGCTTGTCACTGATGAATTGGTTGTTGGTATAATTGATGAA
FD553677       <-- ACACGGGAGCGCTTGTCACTGATGAATTGGTTGTTGGTATAATTGATGAA
FD942543       <-- ..................................................
EX765170       --> ACATGGGAGCGCTTGTCACTGATGAATTGGTTGTTGGTATAATTGATGAA
FD557601       --> ACACGGGAGCGCTTGTCACTGATGAATTGGTTGTTGGTATAATTGATGAA
FD576357       --> ACACGGGAGCGCTTGTCACTGATGAATTGGTTGTTGGTATAATTGATGAA
FD946419       --> ACACGGGAGCGCTTGTCACTGATGAATTGGTTGTTGGTATAATTGATGAA
FD947945       --> ACACGGGAGCGCTTGTCACTGATGAATTGGTTGTTGGTATAATTGATGAA
FD973333       --> ACACGGGAGCGCTTGTCACTGATGAATTGGTTGTTGGTATAATTGATGAA

               351    -    401
UN13512        --> GCCATGAACAAGCCAAAATGTCAGAAAGGCTTTATCCTTGATGGGTTTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768963       <-- GCCATGAACAAGCCAAAATGTCAGAAAGGCTTTATCCTTGATGGGTTTCC
FD537536       <-- GCCATGAACAAGCCAAAATGTCAGAAAGGTTTTATCCTTGATGGGTTTCC
FD580860       <-- GCCATGAACAAGCCAAAATGTCAGAAAGGCTTTATCCTTGATGGGTTTCC
FD943801       <-- GCCATAAACAAGCCAAAATGTCAGAAAGGCTTTATCCTTGATGGGTTTCC
FD553677       <-- GCTATGAACAAGCCAAAATGTCAGAAAGGCTTTATCCTTGATGGGTTTCC
FD942543       <-- ..................................................
EX765170       --> GCCATGAACAAGCCAAAATGTCAGAAAGGCTTTATCCTTGATGGGTTTCC
FD557601       --> GCTATGAACAAGCCAAAATGTCAGAAAGGCTTTATCCTTGATGGGTTTCC
FD576357       --> GCCATGAACAAGCCAAAATGTCAGAAAGGCTTTATCCTTGATGGGTTTCC
FD946419       --> GCCATGAACAAGCCAAAATGTCAGAAAGGCTTTATCCTTGATGGGTTTCC
FD947945       --> GCCATAAACAAGCCAAAATGTCAGAAAGGCTTTATCCTTGATGGGTTTCC
FD973333       --> GCCATGAACAAGCCAAAATGTCAGAAAGGTTTTATCCTTGATGGGTTTCC

               401    -    451
UN13512        --> CAGGACTGTTGCTCAGGCTGAGAAGCTAGATGAGATGCTTAAGAAGCGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768963       <-- CAGGACTGTTGCTCAGGCTGAGAAGCTAGATGAGATGCTTAAGAAGCGTG
FD537536       <-- CAGGACTGTTGCTCAGGCTGAGAAGCTAGATGAGATGCTTAAGAAGCGTG
FD580860       <-- CAGGACTGTTGCTCAGGCTGAGAAGCTAGATGAGATGCTTAAGAAGCGTG
FD943801       <-- CAGGACTGTTGCTCAGGCTGAGAAGCTAGATGAGATGCTTAAGAAGCGTG
FD553677       <-- CAGGACTGTTGCTCAGGCTGAGAAGCTAGATGAGATGCTTAAGAAGCGTG
FD942543       <-- ..................................................
EX765170       --> CAGGACTGTTGCTCAGGCTGAGAAGCTAGATGAGATGCTTAAGAAGCGTG
FD557601       --> CAGGACTGTTGCTCAGGCTGAGAAGCTAGATGAGATGCTTAAGAAGCGTG
FD576357       --> CAGGACTGTTGCTCAGGCTGAGAAGCTAGATGAGATGCTTAAGAAGCGTG
FD946419       --> CAGGACTGTTGCTCAGGCTGAGAAGCTAGATGAGATGCTTAAGAAGCGTG
FD947945       --> CAGGACTGTTGCTCAGGCTGAGAAGCTAGATGAGATGCTTAAGAAGCGTG
FD973333       --> CAGGACTGTTGCTCAGGCTGAGAAGCTAGATGAGATGCTTAAGAAGCGTG

               451    -    501
UN13512        --> GAACTGGAATCGACAAAGTTCTAAACTTTGCTATCGATGACTCAGTCCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768963       <-- GAACTGGAATCGACAAAGTTCTAAACTTTGCTATCGATGACTCAGTCCTG
FD537536       <-- GAACTGGAATCGACAAAGTTCTAAACTTTGCTATCGATGACTCAGTCCTG
FD580860       <-- GAACTGGAATCGACAAAGTTCTAAACTTTGCTATCGATGACTCAGTCCTG
FD943801       <-- GAACTGGAATCGACAAAGTTCTAAACTTTGCTATCGATGACTCAGTCCTG
FD553677       <-- GAACTGGAATCGACAAAGTTCTAAACTTTGCTATCGATGACTCAGTCCTG
FD942543       <-- ..................TTCTAAACTTTGCTATCGATGACTCAGTCCTG
EX765170       --> GAACTGGAATCGACAAAGTTCTAAACTTTGCTATCGATGACTCAGTCCTG
FD557601       --> GAACTGGAATCGACAAAGTTCTAAACTTTGCTATCGATGACTCAGTCCTG
FD576357       --> GAACTGGAATCGACAAAGTTCTAAACTTTGCTATCGATGACTCAGTCCTG
FD946419       --> GAACTGGAATCGACAAAGTTCTAAACTTTGCTATCGATGACTCAGTCCTG
FD947945       --> GAACTGGAATCGACAAAGTTCTAAACTTTGCTATCGATGACTCAGTCCTG
FD973333       --> GAACTGGAATCGACAAAGTTCTAAACTCTGCTATCGATGACTCAGTCCTG

               501    -    551
UN13512        --> GAGGAAAGAATAACCGGGAGATGGATCCACCCATCGAGTGGCAGGAGTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768963       <-- GAGGAAAGAATAACCGGGAGATGGATCCACCCATCGAGTGGCAGGAGTTA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD537536       <-- GAGGAAAGAATAACCGGGAGATGGATCCACCCATCTAGTGGCAGGAGTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD580860       <-- GAGGAAAGAATAACCGGGAGATGGATCCACCCATCGAGTGGCAGGAGTTA  Raphanus sativus cv Rat-Tail Radish #3870
FD943801       <-- GAGGAAAGAATAACCGGGAGATGGATCCACCCATCGAGTGGCAGGAGTTA  Raphanus sativus cv Early Scarlet Globe
FD553677       <-- GAGGAAAGAATAACCGGGAGATGGATCCACCCATCTAGTGGCAGGAGTTA  Raphanus raphanistrum subsp. landra
FD942543       <-- GAGGAAAGAATAACCGGGAGATGGATCCACCCATCGAGTGGCAGGAGTTA  Raphanus sativus cv Early Scarlet Globe
EX765170       --> GAGGAAAGAATAACCGGGAGATGGATCCACCCATCGAGTGGCAGGAGTTA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD557601       --> GAGGAAAGAATAACCGGGAGATGGATCCACCCATCTAGTGGCAGGAGTTA  Raphanus raphanistrum subsp. landra
FD576357       --> GAGGAAAGAATAACCGGGAGATGGATCCACCCATCGAGTGGCAGGAGTTA  Raphanus sativus cv Rat-Tail Radish #3870
FD946419       --> GAGGAAAGAATAACCGGGAGATGGATCCACCCATCGAGTGGCAGGAGTTA  Raphanus sativus cv Early Scarlet Globe
FD947945       --> GAGGAAAGAATAACCGGGAGATGGATCCACCCATCGAGTGGCAGGAGTTA  Raphanus sativus cv Early Scarlet Globe
FD973333       --> GAGGAAAGAATAACCGGGAGATGGATCCACCCATCTAGTGGCAGGAGTTA  Raphanus raphanistrum subsp. raphanistrum (MS)

               551    -    601
UN13512        --> CCACACCAAATTTGCGCCTCCCAAAACCCCTGGAGTTGATGATATTACCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768963       <-- CCACACCAAATTTGCGCCTCC-AAAACCCCTGGAGTTGATGATATTACCG
FD537536       <-- CCACACCAAATTTGCGCCTCCCAAAACCCCTGGAGTTGATGATATTACCG
FD580860       <-- CCACACCAAATTTGCGCCTCCCAAAACCCCTGGAGTTGATGATAT-ACCG
FD943801       <-- CCACACCAAATTTGCGCCTCCCAAAACCCCTGGAGTTGATGATATTACCG
FD553677       <-- CCACACCAAATTTGCGCCTCCCAAAACCCCTGGAGTTGATGATATTACCG
FD942543       <-- CCACACCAAATTTGCGCCTCCCAAAACCCCTGGAGTTGATGATATTACCG
EX765170       --> CCACACCAAATTTGCGCCTCC-AAAACCCCTGGAGTTGATGATATTACCG
FD557601       --> CCACACCAAATTTGCGCCTCCCAAAACCCCTGGAGTTGATGATATTACCG
FD576357       --> CCACACCAAATTTGCGCCTCCCAAAACCCCTGGAGTTGATGATAT-ACCG
FD946419       --> CCACACCAAATTTGCGCCTCCCAAAACCCCTGGAGTTGATGATATTACCG
FD947945       --> CCACACCAAATTTGCGCCTCCCAAAACCCCTGGAGTTGATGATATTA...
FD973333       --> CCACACCAAATTTGCGCCTCCCAAACCCCCTGGAGTTGATGATATTACCG

               601    -    651
UN13512        --> GAGAGCCTCTGATCCAACGTAAAGATGATAATGCTGAGGTTCTAAGGTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768963       <-- GAGAGCCTCTGATCCAACGTAAAGATGATAATGCTGAGGTTCTAAGGTCA
FD537536       <-- GAGAGCCTCTGATCCAACGTAAAGATGATAATGCTGAGGTTCTAAGGTCA
FD580860       <-- GAGAGCCTCTGATCCAGCGTAAAGATGATAATGCTGAGGTTCTAAGGTCA
FD943801       <-- GAGAGCCTCTGATCCAACGTAAAGATGATAATGCTGAGGTTCTAAGGTCA
FD553677       <-- GAGAGCCTCTGATCCAACGTAAAGATGATAATGCTGAGGTTCTAAGGTCA
FD942543       <-- GAGAGCCTCTGATCCAACGTAAAGATGATAATGCTGAGGTTCTAAGGTCA
EX765170       --> GAGAGCCTCTGATCCAACGTAAAGATGATAATGCTGAGGTTCTAAGGTCA
FD557601       --> GAGAGCCTCTGATCCAACGTAAAGATGATAATGCTGAGGTTCTAACGTCA
FD576357       --> GAGAGCCTCTGATCCAGCGTAAAGATGATAATGCTGAGGTTCTAAGGTCA
FD946419       --> GAGAGCCTCTGATCCAACGTAAAGATGATAATGCTGAGGTTCTAAGGTCA
FD947945       --> ..................................................
FD973333       --> GAGAGCCTCTGATCCAACGTAAAGATGATAATGCTGAG-TTCTAAG-TCA

               651    -    701
UN13512        --> AGACTTGCAGCTTTCCACACTCAAACTGAACCGGTGATCGACTACTACGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768963       <-- AGACTTGCAGCTTTCCACACTCAAACTGAACCGGTGATCGATTACTACGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD537536       <-- AGACTTGCAGCTTTCCACACTCAAACTGAACCGGTGATCGACTACTACGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD580860       <-- AGACTTGCAGCTTTCCACACTCAAACTGAACCGGTGATCGACTACTACGC  Raphanus sativus cv Rat-Tail Radish #3870
FD943801       <-- AGACTTGCAGCTTTCCACACTCAAACTGAACCGGTGATCGACTACTACGC  Raphanus sativus cv Early Scarlet Globe
FD553677       <-- AGACTTGCAGCTTTCCACACTCAAACTGAACCGGTGATCGATTACTACGC  Raphanus raphanistrum subsp. landra
FD942543       <-- AGACTTGCAGCTTTCCACACTCAAACTGAACCGGTGATCGACTACTACGC  Raphanus sativus cv Early Scarlet Globe
EX765170       --> AGACTTGCAGCTTTCCACACTCAAACTGAACCGGTGATCGATTACTACGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD557601       --> AGACTTGCAGCTTTCCACACTCAA-CTGAACCGGTGATCGATTACTACGC  Raphanus raphanistrum subsp. landra
FD576357       --> AGACTTGCAGCTTTCCACACTCAAACTGAACCGGTGATCGACTACTACGC  Raphanus sativus cv Rat-Tail Radish #3870
FD946419       --> AGACTTGCAGCTTTCCACACTCAAACTGAACCGGTGATCGACTACTACGC  Raphanus sativus cv Early Scarlet Globe
FD947945       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD973333       --> AGACTTGCAGCTTTCCACACTCAAACTGAACCGGTGATCGACTACTACGC  Raphanus raphanistrum subsp. raphanistrum (MS)

               701    -    751
UN13512        --> AAAGAAGGCCGTTCTTACAAACATCCACGCCGAGAAGGCTCCACAAGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768963       <-- AAAGAAGGCCGTTCTTACAAACATCCACGCCGAGAAGGCTCCACAAGAAG
FD537536       <-- AAAGAAGGCCGTTCTTACAAACATCCACGCCGAGAAGGCTCCACAAGAAG
FD580860       <-- AAAGAAGGCCGTTCTTACAAACATCCACGCCGAGAAGGCTCCACAAGAAG
FD943801       <-- AAAGAAGGCCGTTCTTACAAACATCCACGCCGAGAAGGCTCCACAAGAAG
FD553677       <-- AAAGAAGGCCGTTCTTACAAACATCCACGCCGAGAAGGCTCCACAAGAAG
FD942543       <-- AAAGAAGGCCGTTCTTACAAACATCCACGCCGAGAAGGCTCCACAAGAAG
EX765170       --> AAAGAAG-CCGTTCTTACAAACATCCACGCCGAGAAG-CT-CACAAGAAG
FD557601       --> AAAGAAG-CCGTTCTTACAA-CATCCACGCCGAGAAG-CTCTAC-AGAAG
FD576357       --> AAAGAAG-CCGTTCTTACAA-CATCCACGCCGAGAAG-CTCCACAAGAAG
FD946419       --> AAAG..............................................
FD947945       --> ..................................................
FD973333       --> AAAGAAG-CCGTTCTTACAAcatcacgc......................

               751    -    801
UN13512        --> TGACGTCAGAGGTACAGAAAGCATTGTCCTGATGACGAAAGAAAGACTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768963       <-- TGACGTCAGAGGTACAGAAAGCATTGTCCTGATGACGAAAGAAAGACTGC
FD537536       <-- TGACGTCAGAGGTACAGAAAGCATTGTCCTGATGACGAAAGAAAGACTGC
FD580860       <-- TGACGTCAGAGGTACAGAAAGCATTGTCCTGATGACGAAAGAAAGACTGC
FD943801       <-- TGACGTCAGAGGTACAGAAAGCATTGCCCTGATGACGAAAGAAAGACTGC
FD553677       <-- TGACGTCAGAGGTACAGAAAGCATTGTCCCGATGACGAAAGAAAGACTGC
FD942543       <-- TGACGTCAGAGGTACAGAAAGCATTGTCCTGATGACGAAAGAAAGACTGC
EX765170       --> TGACGTCAGAG-TACAGAAAGCAT-GT-CTGATGA...............
FD557601       --> TGACGTCAGAG-TACAGAA-GCATTGTCCCGATGACGAA-GAAAGACTGC
FD576357       --> TGACGTCAGAG-TACAGAAAGCATTGTCCTGATGACGAAgaa........
FD946419       --> ..................................................
FD947945       --> ..................................................
FD973333       --> ..................................................

               801    -    851
UN13512        --> TCAAGGCAGTCCATCTCCTCTTGAGTTAAAATCCATTCTTTTTCCTTTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768963       <-- TCAAGGCAGTCCATCTCCTCTTGAGTTAAAATCCATTCTTTTTCCTTTCT
FD537536       <-- TCAAGGCAGTCCATCTCCTCTTGAGTTAAAATCCATTCTTTTTCCTTTCT
FD580860       <-- TCAAGGCAGTCCATCTCCTCTTGAGTTAAAATCCATTCTTTTTCCTTTCT
FD943801       <-- TCAAGGCAGTCCATCTCCTCTTGAGTTAAAATCCATTCTTTTTCCTTTCT
FD553677       <-- TCAAGGCAGTCCATCTCCTCTTGAGTTAAAATCCATTCTTTTTCCTTTCT
FD942543       <-- TCAAGGCAGTCCATCTCCTCTTGAGTTAAAATCCATTCTTTTTCCTTTCT
EX765170       --> ..................................................
FD557601       --> ..................................................
FD576357       --> ..................................................
FD946419       --> ..................................................
FD947945       --> ..................................................
FD973333       --> ..................................................

               851    -    901
UN13512        --> ACAAGAGAGACACACTTCTATATATCTTCTCATCTGCGGAATGACAGTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768963       <-- ACAAGAGAGACACACTTCTATATATCTTCTCATTTGCGGAATGACAGTTT
FD537536       <-- ACAAGAGAGACACACTTCTATATATCTTCTCTTCTGCGGAATGACGGTTT
FD580860       <-- ACAAGAGAGACACACTTCTATATATCTTTTCATCTGCGGAATGACAGTTT
FD943801       <-- ACAAGAGAGACACACTTCTATATATCTTCTCATCTGCGGAATGACAGTTT
FD553677       <-- ACAAGAGAGACACACTTCTATATATCTTCTCATTTGCGGAATGACAGTTT
FD942543       <-- ACAAGAGAGACACACTTCTATATATCTTCTCATCTGCGGAATGACAGTTT
EX765170       --> ..................................................
FD557601       --> ..................................................
FD576357       --> ..................................................
FD946419       --> ..................................................
FD947945       --> ..................................................
FD973333       --> ..................................................

               901    -    951
UN13512        --> TTTTTCTAGTCTTTTGCGCCTTTTACGTTTTCGACTAACTTTAAACTTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768963       <-- TTTTTCGAGTCTTTTGCGCCTTTTACGTTTTCGACTAACTTTAAACTTTG
FD537536       <-- TTTTTCTAGTCTTTTGCGCCTTTTACGTTTTCGACTAACTTTAAACTTTG
FD580860       <-- TTTT-CTAGTCTTTTGCGCCTTTTACGTTTTCGACTAACTTTAAACTTTG
FD943801       <-- TTTT-CTAGTCTTTTGCGCCTTTTACGTTTTCGACTAACTTTAAACTTTG
FD553677       <-- TTTTTCGAGTCTTTTGCGCCTTTTACGTTTTCGACTAACTTTAAACTTTG
FD942543       <-- TTTTTCTAGTCTTTTGCGCCTTTTACGTTTTCGACTAACTTTAAACTTTG
EX765170       --> ..................................................
FD557601       --> ..................................................
FD576357       --> ..................................................
FD946419       --> ..................................................
FD947945       --> ..................................................
FD973333       --> ..................................................

               951    -   1001
UN13512        --> GGAGAATAATGTATGCTTCCGACCGATACTGTCTTGTTTATTATCTGCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768963       <-- GGAGAATAATG.......................................
FD537536       <-- GGAGAATAATGTATGCTTCCGAC...........................
FD580860       <-- GGAGAATAATGTATGCTTCCGACCGATACTGTCTTGTTTATTATCTGCTG
FD943801       <-- GGAGA.............................................
FD553677       <-- GGAGAATAATGTATGCTTCCGACCGAT.......................
FD942543       <-- GGAGAATAATGTATGCTTCCGACCGATACTGTCTTGTTTATTATCTGCTG
EX765170       --> ..................................................
FD557601       --> ..................................................
FD576357       --> ..................................................
FD946419       --> ..................................................
FD947945       --> ..................................................
FD973333       --> ..................................................

               1001   -   1051
UN13512        --> TTTCCTGTCTGGTTACATTGTAGCAGTGTCTGTTACATTTCTCTCTCCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768963       <-- ..................................................
FD537536       <-- ..................................................
FD580860       <-- TTTCCTGTCTGGTTACATTGTAGCAGTGTCTGTTACATTTCTCTCTCCAT
FD943801       <-- ..................................................
FD553677       <-- ..................................................
FD942543       <-- TTTCCTGTCTGGTT....................................
EX765170       --> ..................................................
FD557601       --> ..................................................
FD576357       --> ..................................................
FD946419       --> ..................................................
FD947945       --> ..................................................
FD973333       --> ..................................................

               1051   -   1101
UN13512        --> CAAATCAATAAACAACTTTGGTAGGGAGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768963       <-- ..............................
FD537536       <-- ..............................
FD580860       <-- CAAATCAATAAACAACTTTGGTAGGGAGCT
FD943801       <-- ..............................
FD553677       <-- ..............................
FD942543       <-- ..............................
EX765170       --> ..............................
FD557601       --> ..............................
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FD973333       --> ..............................