RadishBase

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Alignment for radish unigene UN13522

               -2     -     48
UN13522        --> ...GAGAGAGAGAGAGAGAGCGAG--TTGAGAAAGAATGACATCGAGGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX776875       <-- ..................................................
FD975795       <-- ..................................................
EX909534       <-- ..................................................
EX900578       <-- ..................................................
EY909582       <-- ..................................................
EY909328       <-- ..................................................
FD555047       <-- ..................................................
EX760232       <-- ..................................................
EY901885       <-- ..................................................
EX896688       --> ..gGAGAGAGAGAGAGAGAGCGAG--TTGAGAAAGAATGACATCGAGGTA
FD564118       --> ggaGAGAGAGAGAGAGAGAGCGAG--TTGAGAAAGAATGACATCGAGGTA
FD561276       --> ......gGAGAGAGAGAGAGCGAG--TTGAGAAAGAGTGACATCGAGGTA
EX905874       --> ......gggaAGAGAGAGAGCGAGAACTGAGAAAGAATGACATCGAGGTA
EY905448       --> .............ggaAGAGAGAT--TTGAGAAAGAATGACATCGAGGTA
EY900714       --> ...............ggGAGAGAT--TTGAGAAAGAATGACATCGAGGTA
EY913017       --> ..........................TTGAGAAAGAATGACATCGAGGTA
FD956775       --> .........................acTGAGAAAGAATGACATCGAGGTA
EX756419       --> ...............................gAAGAATGACATCGAGGTA
EX773028       --> ..................................................
FD559321       --> ..................................................

               48     -     98
UN13522        --> CTGGGTGGTGTCTCTACCAGTGAAGGACTCTTCTTCCACCTTGTGGAATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX776875       <-- ..................................................
FD975795       <-- ..................................................
EX909534       <-- ..................................................
EX900578       <-- ..................................................
EY909582       <-- ..................................................
EY909328       <-- ..................................................
FD555047       <-- ..................................................
EX760232       <-- ..................................................
EY901885       <-- ..................................................
EX896688       --> CTGGGTGGTGTCTCTACCAGTGAAGGACTCTTCTTCCACCTTGTGGAATC
FD564118       --> CTGGGTGGTGTCTCTACCAGTGAAGGACTCTTCTTCCACCTTGTGGAATC
FD561276       --> CTGGGTGGTGTCTCTACCAGTGAAGGACTCTTCTTCCACCTTGTGGAATC
EX905874       --> CTGGGTGGTGTCTCTACCAGTGAAGGACTCTTCTTCCACCTTGTGGAATC
EY905448       --> CTGGGTGGTGTCTCTACCAGTGAAGGACTCTTCTTCCACCTTGTGGAATC
EY900714       --> CTGGGTGGTGTCTCTACCAGTGAAGGACTCTTCTTCCACCTTGTGGAATC
EY913017       --> CTGGGTGGTGTCTCTACCAGTGAAGGACTCTTCTTCCACCTTGTGGAATC
FD956775       --> CTGGGTGGTGTCTCTACCAGTGAAGGACTCTTCTTCCACCTTGTGGAATC
EX756419       --> CTGGGTGGTGTCTCTACCAGTGAAGGACTCTTCTTCCACCTTGTGGAATC
EX773028       --> ...........CTCTACCAGTGAAGGACTCTTCTTCCACCTTGTGGAATC
FD559321       --> ..................................................

               98     -    148
UN13522        --> GTCTACAGGAGCAGATCTCCAAGCATTCCTTTGACACTCCAGTTTATCGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX776875       <-- ..................................................
FD975795       <-- ..................................................
EX909534       <-- ..................................................
EX900578       <-- ..................................................
EY909582       <-- ..................................................
EY909328       <-- ..................................................
FD555047       <-- ..................................................
EX760232       <-- ..................................................
EY901885       <-- ..................................................
EX896688       --> GTCTACAGGAGCAGATCTCCAAGCATTCCTTTGACACTCCCGTTTATCGG
FD564118       --> GTCTACAGGAGCAGATCTCCAAGCATTCCTTTGACACTCCCGTTTATCGG
FD561276       --> GTCTACAGGAGCAGATCTCCAAGCATTCCTTTGACACTCCCGTTTATCGG
EX905874       --> GTCTACAGGAGCAGATCTCCAAGCATTCCTTTGACACTCCAGTTTATCGG
EY905448       --> GTCTACAGGAGCAGATCTCCAAGCATTCCTTTGACACTCCAGTTTATCGG
EY900714       --> GTCTACAGGAGCAGATCTCCAAGCATTCCTTTGACACTCCAGTTTATCGG
EY913017       --> GTCTACAGGAGCAGATCTCCAAGCATTCCTTTGACACTCCAGTTTATCGG
FD956775       --> GTCTACAGGAGCAGATCTCCAAGCATTCCTTTGACACTCCAGTTTATCGG
EX756419       --> GTCTACAGGAGCAGATCTCCAAGCATTCCTTTGACACTCCAGTTTATCGG
EX773028       --> GTCTACAGGAGCAGATCTCCAAGCATTCCTTTGACACTCCAGTTTATCGG
FD559321       --> ..................................................

               148    -    198
UN13522        --> TTCAACATTCCTAATCTTCGTGTTGGAACATTAGATTCTCTGCTCGCTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX776875       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD975795       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX909534       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX900578       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY909582       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY909328       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD555047       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX760232       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY901885       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX896688       --> TTCAACATTCCTAATCTTCGTGTTGGAACATTAGATTCTCTGCTCGCTCT  Raphanus sativus cv Early Scarlet Globe
FD564118       --> TTCAACATTCCTAATCTTCGTGTTGGAACATTAGATTCTCTGCTCGCTCT  Raphanus sativus var. oleiformis
FD561276       --> TTCAACATTCCTAATCTTCGTGTTGGAACATTAGATTCTCTGCTCGCTCT  Raphanus sativus var. oleiformis
EX905874       --> TTCAACATTCCTAATCTTCGTGTTGGAACATTAGATTCTCTGCTCGCTCT  Raphanus sativus cv Rat-Tail Radish #3870
EY905448       --> TTCAACATTCCTAATCTTCGTGTTGGAACATTAGATTCTCTGCTAGCCCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY900714       --> TTCAACATTCCTAATCTTCGTGTTGGAACATTAGATTCTCTGCTCGCCCT  Raphanus raphanistrum subsp. maritimus
EY913017       --> TTCAACATTCCTAATCTTCGTGTTGGAACATTAGATTCTCTGCTCGCTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD956775       --> TTCAACATTCCTAATCTTCGTGTTGGAACATTAGATTCTCTGCTCGCTCT  Raphanus sativus cv Rat-Tail Radish #3870
EX756419       --> TTCAACATTCCTAATCTTCGTGTTGGAACATTAGATTCTCTGCTCGCCCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX773028       --> TTCAACATTCCTAATCTTCGTGTTGGAACATTAGATTCTCTGCACGCCCT  Raphanus raphanistrum subsp. landra
FD559321       --> ..................................................  Raphanus raphanistrum subsp. landra

               198    -    248
UN13522        --> CGGCGATGATCTGCTAAAGTCAAACAGCTTTGTGGAAGGAGTATCGCAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX776875       <-- ..................................................
FD975795       <-- ..................................................
EX909534       <-- ..................................................
EX900578       <-- ..................................................
EY909582       <-- ..................................................
EY909328       <-- ..................................................
FD555047       <-- ..................................................
EX760232       <-- ..................................................
EY901885       <-- ..................................................
EX896688       --> CGGCGATGATCTGCTAAAGTCAAACAGCTTTGTGGAAGGAGTATCGCAGA
FD564118       --> CGGCGATGATCTGCTAAAGTCAAACAGCTTTGTGGAAGGAGTATCGCAGA
FD561276       --> CGGCGATGATCTGCTAAAGTCAAACAGCTTTGTGGAAGGAGTATCGCAGA
EX905874       --> CGGCGATGATCTGCTAAAGTCAAACAGCTTTGTGGAAGGAGTATCGCAGA
EY905448       --> CGGCGATGATCTGCTAAAGTCAAACAGTTTTGTGGAAGGAGTATCGCAGA
EY900714       --> CGGCGATGATCTGCTGAAGTCAAACAGCTTTGTGGAAGGAGTATCGCAGA
EY913017       --> CGGCGATGATCTGCTAAAGTCAAACAGCTTTGTGGAAGGAGTATCACAGA
FD956775       --> CGGCGATGATCTGCTAAAGTCAAACAGCTTTGTGGAAGGAGTATCGCAGA
EX756419       --> CGGCGATGATCTGCTAAAATCAAACAGCTTTGTGGAAGGAGTATCGCA..
EX773028       --> CGGCGATGATCTGCTGAAGTCAAACAGCTTTGTGGAAGGAGTATCGCAGA
FD559321       --> ..................................................

               248    -    298
UN13522        --> AGATAAGGAGACAGATCGAAGAGTTGGAGAGGATCTCTGGTGTGGAGAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX776875       <-- ..................................................
FD975795       <-- ..................................................
EX909534       <-- ..................................................
EX900578       <-- ..................................................
EY909582       <-- ..................................................
EY909328       <-- ..................................................
FD555047       <-- ..................................................
EX760232       <-- ..................................................
EY901885       <-- ..................................................
EX896688       --> AGATAAGGAGACAGATCGAAGAGTTGGAGAGGATCTCTGGTGTGGAGAGC
FD564118       --> AGATAAGGAGACAGATCGAAGAATTGGAGAGGATCTCTGGTGTGGAGAGC
FD561276       --> AGATAAGGAGACAGATCGAAGAATTGGAGAGGATCTCTGGTGTGGAGAGC
EX905874       --> AGATAAGGAGACAGATCGAAGAGTTGGAGAGGATCTCTGGTGTGGAGAGC
EY905448       --> AGATAAGGAGACAGATCGAAGAATTGGAGAGGATCTCTGGTGTGGAGAGC
EY900714       --> AGATAAGGAGACAGATCGAAGAGTTGGAGAGGATCTCTGGTGTGGAGAGC
EY913017       --> AGATAAGGAGACAGATCGAAGAATTGGAGAGGATCTCTGGTGTGGAGAGC
FD956775       --> AGATAAGGAGACAGATCGAAGAGTTGGAGAGGATCTCTGGTGTGGAGAGC
EX756419       --> ..................................................
EX773028       --> AGATAAGGAGACAGATCGAAGAGTTGGAGAGGATCTCTGGTGTGGAGAGC
FD559321       --> .....................................TGGTGTGGAGAGC

               298    -    348
UN13522        --> AACGCTCTTACTGTTGATGGAGTTCCTGTTGATTCTTATCTCACCAGGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX776875       <-- ..................................................
FD975795       <-- ..................................................
EX909534       <-- ..................................................
EX900578       <-- ..................................................
EY909582       <-- ..................................................
EY909328       <-- ..................................................
FD555047       <-- ..................................................
EX760232       <-- ..................................................
EY901885       <-- ..................................................
EX896688       --> AACGCTCTTACTGTTGATGGAGTTCCCGTTGATTCTTATCTCACCAGGTT
FD564118       --> AACGCTCTTACTGTTGATGGAGTTCCTGTTGATTCTTATCTCACCCTGTT
FD561276       --> AACGCTCTTACTGTTGATGGAGTTCCTGTTGATTCTTATCTCACCAGGTT
EX905874       --> AACGCTCTTACTGTTGATGGAGTTCCTGTTGATTCTTATCTCACCAGGTT
EY905448       --> AACGCTCTTACTGTTGATGGAGTTCCTGTTGATTCTTATCTCACCAGGTT
EY900714       --> AACGCTCTTACTGTTGATGGAGTTCCTGTTGATTCTTATCTCACCAGGTT
EY913017       --> AACGCTCTAACTGTTGATGGAGTTCCTGTTGATTCTTATCTCACTAGGTT
FD956775       --> AACGCTCTTACTGTTGATGGAGTTCCTGTTGATTCTTATCTCACCAGGTT
EX756419       --> ..................................................
EX773028       --> AACGCTCTAACTGTTGATGGAGTTCCTGTTGATTCTTATCTCACTAGGTT
FD559321       --> AACGCTCTAACTGTTGATGGAGTTCCTGTTGATTCTTATCTCACTAGGTT

               348    -    398
UN13522        --> TGTGTGGGATGAAGCTAAGTACCCAACAATGTCACCTCTCAAGGAGGTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX776875       <-- ..................................................
FD975795       <-- ..................................................
EX909534       <-- ..................................................
EX900578       <-- ..................................................
EY909582       <-- ..................................................
EY909328       <-- ..................................................
FD555047       <-- ..................................................
EX760232       <-- ..................................................
EY901885       <-- ..................................................
EX896688       --> TGTGTGGGATGAAGCTAAGTACCCAACAATGTCACCTCTCAAGGAGGTTG
FD564118       --> TGTGTGGGATGAAGCTAAGTACCCAACAATGTCACCTCTCAAGGAGGTTG
FD561276       --> TGTGTGGGATGAAGCTAAGTACCCAACAATGTCACCTCTCAAGGAGGTTG
EX905874       --> TGTGTGGGATGAAGCTAAGTACCCAACAATGTCACCTCTCAAGGAGGTTG
EY905448       --> TGTGTGGGATGAAGCTAAGTACCCAACAATGTCACCTCTCAAGGAGGTTG
EY900714       --> TGTGTGGGATGAAGCTAAGTACCCAACAATGTCACCTCTCAAGGAGGTTG
EY913017       --> TGTGTGGGATGAAGCTAAGTACCCAACAATGTCACCTCTCAAGGAGGTTG
FD956775       --> TGTGTGGGATGAAGCTAAGTACCCAACAATGTCACCTCTCAAGGAGGTTG
EX756419       --> ..................................................
EX773028       --> TGTCTGGGATGAAGCTAAGTACCCAACAATGTCACCTCTCAAGGAGGTTG
FD559321       --> TGTGTGGGATGAAGCTAAGTACCCAACAATGTCACCTCTCAAGGAGGTTG

               398    -    448
UN13522        --> TGGACAACATTCAGTCTCAGGTTGCAAAGATTGAGGATGATCTCAAGGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX776875       <-- ..................................................
FD975795       <-- ..................................................
EX909534       <-- ..................................................
EX900578       <-- ..................................................
EY909582       <-- ..................................................
EY909328       <-- ..................................................
FD555047       <-- ..................................................
EX760232       <-- ..................................................
EY901885       <-- ..................................................
EX896688       --> TGGACAACATTCAGTCTCAGGTTGCAAAGATTGAGGATGATCTCAAGGTT
FD564118       --> TGGACAACATTCAGTCTCAGGTTGCAAAGATTGAGGATGATCTCAAGGTT
FD561276       --> TGGACAACATTCAGTCTCAGGTTGCAAAGATTGAGGATGATCTCAAGGTT
EX905874       --> TGGACAACATTCAGTCTCAGGTTGCAAAGATTGAGGATGATCTCAAGGTT
EY905448       --> TGGACAACATTCAGTCTCGGGTTGCAAAGATTGAGGATGATCTCAAGGTT
EY900714       --> TGGACAACATTCAGTCTCAGGTTGCAAAGATTGAGGATGATCTCAAGGTT
EY913017       --> TGGACAACATTCAGTCTCAGGTTGCAAAGATTGAGGATGATCTCAAGGTT
FD956775       --> TGGACAACATTCAGTCTCAGGTTGCAAAGATTGAGGATGATCTCAAGGTT
EX756419       --> ..................................................
EX773028       --> TGGACAACATTCAGTCT-AGGTTGCAAAGATTGAGGATGATCTCAAGGTT
FD559321       --> TGGACAACATTCAGTCTCAGGTTGCAAAGATTGAGGATGATCCCAAGGTT

               448    -    498
UN13522        --> CGTGTTGCTGAGTATAACAATGTCCGCGGTCAACTCAATGCCATTAACCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX776875       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD975795       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX909534       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX900578       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY909582       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY909328       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD555047       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX760232       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY901885       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX896688       --> CGTGTTGCTGAGTATAACAATGTCCGCGGTCAACTCAACGCCATTAACCG  Raphanus sativus cv Early Scarlet Globe
FD564118       --> CGTGTTGCTGAGTATAACAATGTCCGCGGTCAACTCAACGCCATTAACCG  Raphanus sativus var. oleiformis
FD561276       --> CGTGTTGCTGAGTATAACAATGTCCGCGGTCAACTCAACGCCATTAACCG  Raphanus sativus var. oleiformis
EX905874       --> CGT--TGCTGAGTATAACAATGTCCGCGGTCAACTCAACGCCATTAACCG  Raphanus sativus cv Rat-Tail Radish #3870
EY905448       --> CGTGTTGCTGAGTATAACAATGTCCGCAGTCAACTCAATGCCATTAACAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY900714       --> CGTGTTGCTGAATATAACAATGTCCGCGGTCAACTCAATGCCATTAACCG  Raphanus raphanistrum subsp. maritimus
EY913017       --> CGTGTTGCTGAATATAACAATGTCCGCGGTCAACTCAATGCCATTAACCG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD956775       --> CGTGTTGCTGAGTATAACAATGTCCGCGGTCAACTCAACGCCATTAACCG  Raphanus sativus cv Rat-Tail Radish #3870
EX756419       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX773028       --> CGTGTTGCTGAATATAACAATGTCCGCGGTCAACTCAATGCCACTAACCG  Raphanus raphanistrum subsp. landra
FD559321       --> CGTGTTGCTGAATATAACAATGTCCGCGGTCAACTCAATGCCATTAACCG  Raphanus raphanistrum subsp. landra

               498    -    548
UN13522        --> AAAGCAAAGTGGAAGTTTAGCTGTTCGCGACCTCTCAAGCTTGGTTAAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX776875       <-- .......AGTGGAAGTTTAGCTGTTCGCGACCTATCAAGCTTGGTTAAGC  Raphanus raphanistrum subsp. landra
FD975795       <-- ............................................TTAAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX909534       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX900578       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY909582       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY909328       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD555047       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX760232       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY901885       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX896688       --> AAAGCAAAGTGGAAGCTTAGCTGTTCGCGACCTCTCAAGCTTGGTTAAGC  Raphanus sativus cv Early Scarlet Globe
FD564118       --> AAAGCAAAGTGGAAGCTTAGCTGTTCGCGACCTCTCAAGCTTGGTTAAGC  Raphanus sativus var. oleiformis
FD561276       --> AAAGCAAAGTGGAAGCTTAGCTGTTCACGACCTCTCAAGCTTGGTTAAGC  Raphanus sativus var. oleiformis
EX905874       --> AAAGCAAAGTGGAAGCTTAGCTGTTCGCGACCTCTCAAGCTTGGTTAAGC  Raphanus sativus cv Rat-Tail Radish #3870
EY905448       --> AAAGCAAAGTGGAAGTTTAGCTGTTCGCGACCTTTCAAGCTTGGTTAAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY900714       --> AAAGCAAAGTGGAAGTTTAGCTGTTCGCGACCTCTCAAGCTTGGTTAAGC  Raphanus raphanistrum subsp. maritimus
EY913017       --> AAAGCAAAGTGGAAGTTTAGCTGTTCGCGACCTATCAAGCTTGGTTAAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD956775       --> AAAGCAAAGTGGAAGCTTAGCTGTTCGCGACCTCTCAAGCTTGGTTAAGC  Raphanus sativus cv Rat-Tail Radish #3870
EX756419       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX773028       --> AAAGCAAAGTGGAAGTTTAGCTGTTCGCGACCTATCAAGCTTGGTTAAGC  Raphanus raphanistrum subsp. landra
FD559321       --> AAAGCAAAGTGGAAGTTTAGCTGTTCGCGACCTATCAAGCTTGGTTAAGC  Raphanus raphanistrum subsp. landra

               548    -    598
UN13522        --> CAGAAGATATTGTCGCATCGGAACATCTCGAGACTCTCCTTGCAGTTGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX776875       <-- CAGAAGATATTGTCGCATCGGAACATCTCGAGACTCTCCTTGCAGTTGTT  Raphanus raphanistrum subsp. landra
FD975795       <-- CAGAAGATATTGTCGCATCGGAACATCTCGAGACTCTCCTTGCAGTTGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX909534       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX900578       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY909582       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY909328       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD555047       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX760232       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY901885       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX896688       --> CAGAAGATATTGTCGCATCAGAACATCTCGAGACTCTCCTTGCAGTTGTT  Raphanus sativus cv Early Scarlet Globe
FD564118       --> CAGAAGATATTGTCGCATCAGAACATCTCGAGACTCTCCTTGCAGTTGTT  Raphanus sativus var. oleiformis
FD561276       --> CAGAAGATATTGTCGCATCAGAACATCTCGAGACTCTCCTTGCAGTTGTT  Raphanus sativus var. oleiformis
EX905874       --> CAGAAGATATTGTCGCATCAGAACATCTCGAGACTCTCCTTGCAGTTGTT  Raphanus sativus cv Rat-Tail Radish #3870
EY905448       --> CAGAAGATATTGTCGCATCGGAACATCTCGAGACTCTCCTTGCAGTTGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY900714       --> CAGAAGATATTGTCGCATCAGAACATCTCGAGACTCTCCTTGCAGTTGTT  Raphanus raphanistrum subsp. maritimus
EY913017       --> CAGAAGATATTGTCGCATCGGAACATCTCGAGACTCTCCTTGCAGTTGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD956775       --> CAGAAGATATTGTCGCATCAGAACATCTCGAGACTCTCCTTGCAGTTGTT  Raphanus sativus cv Rat-Tail Radish #3870
EX756419       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX773028       --> CAGAAGATATTGTCGCATCGGAACATCTCGAGACTCTCCTTGCAGTTGTT  Raphanus raphanistrum subsp. landra
FD559321       --> CAGAAGATATTGTCGCATCGGAACATCTCGAGACTCTCCTTGCAGTTGTT  Raphanus raphanistrum subsp. landra

               598    -    648
UN13522        --> CCAAAGTATTCCCAAAAAGACTGGCTAGCATGCTATGAGACATTGACCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX776875       <-- CCAAAGTATTCCCAAAAAGACTGGCTAGCATGCTATGAGACATTGACCGA  Raphanus raphanistrum subsp. landra
FD975795       <-- CCAAAGTATTCCCAAAAAGACTGGCTAGCATGCTATGAGACATTGACCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX909534       <-- ................................................GA  Raphanus sativus cv Rat-Tail Radish #3870
EX900578       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY909582       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY909328       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD555047       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX760232       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY901885       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX896688       --> CCAAAGTATTCTCAAAAAGACTGGCTAGCATGCTATGAGACACTGACCGA  Raphanus sativus cv Early Scarlet Globe
FD564118       --> CCAAAGTATTCTCAAAAAGACTGGCTAGCATGCTATGAGACACTGACCGA  Raphanus sativus var. oleiformis
FD561276       --> CCAAAGTATTCTCAAAAAGACTGGCTAGCATGCTATGAGACACTGACCGA  Raphanus sativus var. oleiformis
EX905874       --> CCAAAGTATTCTCAAAAAGACTGGCTAGCATGCTATGAGACACTGACCGA  Raphanus sativus cv Rat-Tail Radish #3870
EY905448       --> t.................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY900714       --> CCAAAGTATTCCCAAAAAGACTGGCTAGCATGCTATGAGACATTGACCGA  Raphanus raphanistrum subsp. maritimus
EY913017       --> CCAAAGTATTCCCAAAAAGACTGGCTAGCATGCTATGAGACATTGACCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD956775       --> CCAAAGTATTCTCAAAAAGACTGGCTAGCATGCTATGAGACACTGACCGA  Raphanus sativus cv Rat-Tail Radish #3870
EX756419       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX773028       --> CCAAAGTATTCCCAAAAAGACTGGCTAGCATGCTATGAGACATTGACCGA  Raphanus raphanistrum subsp. landra
FD559321       --> CCAAAGTATTCCCAAAAAGACTGGCTAGCATGCTATGAGACATTGACCGA  Raphanus raphanistrum subsp. landra

               648    -    698
UN13522        --> CTTTGTGGTTCCTAGGTCTTCGAAGAAATTGTTTGAGGATAATGAGTATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX776875       <-- CTTTGTGGTTCCTAGGTCATCGAAGAAATTGTTTGAGGATAATGAGTATG  Raphanus raphanistrum subsp. landra
FD975795       <-- CTTTGTGGTTCCTAGGTCATCGAAGAAATTGTTTGAGGATAATGAGTATG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX909534       <-- CTTTATGGTTCCTAGGTCTTCGAAGAAATTGTTTGAGGATAATGAGTATG  Raphanus sativus cv Rat-Tail Radish #3870
EX900578       <-- ..................TTCGAAGAAATTGTTTGAGGATAATGAGTATG  Raphanus sativus cv Early Scarlet Globe
EY909582       <-- ......................AAGAAATTGTTTGAGGATAATGAGTATG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY909328       <-- ................................TTGAGGATAATGAGTATG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD555047       <-- ..............................................TATG  Raphanus raphanistrum subsp. landra
EX760232       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY901885       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX896688       --> CTTTGTGGTTCCTAG-TCTTCGAAGAAATTGTTTGAGGATAATGAGTATG  Raphanus sativus cv Early Scarlet Globe
FD564118       --> CTTTGTGGTTCCTAGGTCTTCGAAGAAATTGTTTGAGGATAATGAGTATG  Raphanus sativus var. oleiformis
FD561276       --> CTTTGTGGTTCCTAGGTCTTCGAAGAAATTGTTTGAGGATAATGAGTATG  Raphanus sativus var. oleiformis
EX905874       --> CTTTATGGTTCCTAG-TCTTCGAAGAAATTGTTTGAGGATAATGAGTATG  Raphanus sativus cv Rat-Tail Radish #3870
EY905448       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY900714       --> CTTTGTGGTTC.......................................  Raphanus raphanistrum subsp. maritimus
EY913017       --> CTTTGTGGTTCCTAG-TCATCGAAGAAATTGTTTGAGGATAATGAGTATG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD956775       --> CTTTGTGGTTCCTAGGTCTTCGAAGAAATTGTTTGAGGATAATGAGTATG  Raphanus sativus cv Rat-Tail Radish #3870
EX756419       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX773028       --> CTTTGTGGTTCCTAG-TCATCGAAGAAATTGTTTGAGGATAATGAGTATG  Raphanus raphanistrum subsp. landra
FD559321       --> CTTTGTGGTTCCTAGGTCATCGAAGAAATTGTTTGAGGATAATGAGTATG  Raphanus raphanistrum subsp. landra

               698    -    748
UN13522        --> CTCTTTACACCGTCACTCTCTTCACTCGTGTTGCAGATAATTTCAGGACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX776875       <-- CTCTTTACACCGTCACTCTCTTCACTCGTGTTGCAGATAATTTCAGGACT
FD975795       <-- CTCTTTACACCGTCACTCTCTTCACTCGTGTTGCAGATAATTTCAGGACT
EX909534       <-- CTCTTTACACCGTCACTCTCTTCACTCGTGTTGCAGATAATTTCAGGACT
EX900578       <-- CTCTTTACACCGTCACTCTCTTCACTCGTGTTGCAGATAATTTCAGGACT
EY909582       <-- CTCTTTACACCGTCACTCTCTTCACTCGTGTTGCAGATAATTTCAGGACT
EY909328       <-- CTCTTTACACCGTCACTCTCTTCACTCGTGTTGCAGATAATTTCAGGACT
FD555047       <-- CTCTTTACAC-GTCACTCTCTTCACTCGTGTTGCAGATAATTTCAGGACT
EX760232       <-- ..................................................
EY901885       <-- ..................................................
EX896688       --> CTCTTTACACCGTCACTCTCTTCACTCGTGTTGCAGATA-TTTCAG-ACT
FD564118       --> CTCTTTACACCGTCACTCTCTTCACTCGTGTTGCAGATAATTTCAG-ACT
FD561276       --> CTCTTTACACCGTCACTCTCTTCACTCGTGTTGCAGA.............
EX905874       --> CTCTTTACACCGTCACTCTCTTCACTCGTGTTGCAGATAATTTCAG-ACT
EY905448       --> ..................................................
EY900714       --> ..................................................
EY913017       --> CTCTTTACACCGTCACTCTCTTCACTCGTGTTGCAGATA-TTTCAG-ACT
FD956775       --> CTCTTTACACCGTCACTCT...............................
EX756419       --> ..................................................
EX773028       --> CTCTTTACACCGTCACTCTCTTCACTCGTGTTGCAGATAATTTCAG-ACT
FD559321       --> CTCTTTACACCGTCACTCTCTTCACTCGTGTTGCAGATAATTTCAGGACT

               748    -    798
UN13522        --> AATGCGCGTGAGAAAGGGTTCCAAGTTCGTGATTTTGAACATAGCGTTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX776875       <-- AATGCGCGTGAGAAAGGGTTCCAAGTTCGTGATTTTGAACATAGCGTTGA
FD975795       <-- AATGCGCGTGAGAAAGGGTTCCAAGTTCGTGATTTTGAACATAGCGTTGA
EX909534       <-- AATGCGCGTGAGAAAGGGTTCCAAGTTCGTGATTTTGAACATAGCGTTGA
EX900578       <-- AATGCGCGTGAGAAAGGGTTCCAAGTTCGTGATTTTGAACATAGCGTTGA
EY909582       <-- AATGCGCGTGAGAAAGGGTTCCAAGTTCGTGATTTTGAACATAGCGTTGA
EY909328       <-- AATGCGCGTGGGAAAGGGTTCCAAGTTCGTGATTTTGAACATAGCGTTGA
FD555047       <-- AATGCGCGTGAGAAAGGGTTCCAAGTTCGTGATTTTGAACATAGCGTTGA
EX760232       <-- ..................................................
EY901885       <-- ..................................................
EX896688       --> AATGCGCGTGAGAAAG..................................
FD564118       --> AATGCGCGTGAGAAAGGGTTCCAAGTTCGTGATTTTGAACATAGCGTgaa
FD561276       --> ..................................................
EX905874       --> AATGCGCGT.........................................
EY905448       --> ..................................................
EY900714       --> ..................................................
EY913017       --> AATGCGCGTGGGAAAGG-TTCCAAGTTCGTGATTT-G-ACATAGCGTTGA
FD956775       --> ..................................................
EX756419       --> ..................................................
EX773028       --> -ATGCGCGTGAGAA....................................
FD559321       --> AATGCGCGTGAGAAAGGGTTCCAAGTTCGTGATTTTGAACATAGCGTTGA

               798    -    848
UN13522        --> AGCACAAGAGACTCGTAAACAAGAGCTAGAGAAGCTGGTTCATGATCAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX776875       <-- AGCACAATAGACTCGTAAACAAGAGCTAGAGAAGCTGGTTCATGATCAGG
FD975795       <-- AGCACAAGAGACTCGTAACCAAGAGCTAGAGAAGCTGGTTCATGATCAGG
EX909534       <-- AGCACAAGAGACTCGTAAACAAGAGCTAGAGAAGCTGGTTCATGATCAGG
EX900578       <-- AGCACAAGAGACTCGTAAACAAGAGCTAGAGAAGCTGGTTCATGATCAGG
EY909582       <-- AGCACAAGAGACTCGTAAACAAGAGCTAGAGAAGCTGGTTCATGATCAGG
EY909328       <-- AGCACAAGAGACTCGTAAACAAGAGCTAGAGAAGCTGGTTCATGATCAGG
FD555047       <-- AGCACAAGAGACTCGTAAACAAGAGCTAGAGAAGCTGGTTCATGATCAGG
EX760232       <-- ..................................................
EY901885       <-- ..................................................
EX896688       --> ..................................................
FD564118       --> g.................................................
FD561276       --> ..................................................
EX905874       --> ..................................................
EY905448       --> ..................................................
EY900714       --> ..................................................
EY913017       --> -GCACAAGAGACTCGTAA-C-AGAGCTAGAGA-GCTGGT-CATGATC...
FD956775       --> ..................................................
EX756419       --> ..................................................
EX773028       --> ..................................................
FD559321       --> AGCACAAGAGACTCGTAAACAAGAGCTAGAGAAGCTGGTTCATGATCAGG

               848    -    898
UN13522        --> AAAGTTTGAGAAGCTCTCTTTTGCAGTGGTGCTACACCAGTTACGGAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX776875       <-- AAAGTTTGAGAAGCTCTCTTTTGCAGTGGTGCTACACCAGTTACGGAGAG
FD975795       <-- AAAGTTTGAGAAGCTCTCTTTTGCAGTGGTGCTACACCAGTTACGGAGAG
EX909534       <-- AAAGTTTGAGAAGCTCTCTTTTGCAGTGGTGCTACACCAGTTACGGAGAG
EX900578       <-- AAAGTTTGAGAAGCTCTCTTTTGCAGTGGTGCTACACCAGTTACGGAGAG
EY909582       <-- AAAGTTTGAGAAGCTCTCTTTTGCAGTGGTGCTACACCAGTTACGGAGAG
EY909328       <-- AAAGTTTGAGAAGCTCTCTTTTGCAGTGGTGCTACACCAGTTACGGAGAG
FD555047       <-- AAAGTTTGAGAAGCTCTCTTTTGCAGTGGTGCTACACCAATTACGGAGAG
EX760232       <-- ....................................CCAGTTACGGAGAG
EY901885       <-- ..................................................
EX896688       --> ..................................................
FD564118       --> ..................................................
FD561276       --> ..................................................
EX905874       --> ..................................................
EY905448       --> ..................................................
EY900714       --> ..................................................
EY913017       --> ..................................................
FD956775       --> ..................................................
EX756419       --> ..................................................
EX773028       --> ..................................................
FD559321       --> AAAGTTTGAGAAGCTCTCTTTTGCAGTGGTGCTACACCAATTACGGAGAG

               898    -    948
UN13522        --> GTTTTCAGCTCATGGATGCATTTCTGTGCTGTGCGTATATTCGCTGAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX776875       <-- GTTTTCAGCTCATGGATGCATTTCTGTGCTGTGCGTATATTCGCTGAGAG
FD975795       <-- GTTTTCAGCTCATGGATGCATTTCTGTGCTGTGCGTATATTCGCTGAGAG
EX909534       <-- GTTTTCAGCTCATGGATGCATTTCTGTGCTGTGCGTATATTCGCTGAGAG
EX900578       <-- GTTTTCAGCTCATGGATGCATTTCTGTGCTGTGCGTATATTCGCTGAGAG
EY909582       <-- GTTTTCAGCTCATGGATGCATTTCTGTGCTGTGCGTATATTCGCTGAGAG
EY909328       <-- GTTTTCAGCTCATGGATGCATTTCTGTGCTGTGCGTATATTCGCTGAGAG
FD555047       <-- GTTTTCAGCTCATGGATGCATTTCTGTGCTGTGCGTATATTCGCTGAGAG
EX760232       <-- GTTTTCAGCTCATGGATGCATTTCTGTGCTGGGCGTATATTCGCTGAGAG
EY901885       <-- ..................................................
EX896688       --> ..................................................
FD564118       --> ..................................................
FD561276       --> ..................................................
EX905874       --> ..................................................
EY905448       --> ..................................................
EY900714       --> ..................................................
EY913017       --> ..................................................
FD956775       --> ..................................................
EX756419       --> ..................................................
EX773028       --> ..................................................
FD559321       --> GTTTTCAGCTCATGGATGCATTTCTGTGCTGTGCGTATATTCGCTGAGAG

               948    -    998
UN13522        --> CATAATGAGATATGGTTTACCTCCGGCGTTCTTGGCATGTGTCTTATCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX776875       <-- CATAATGAGATATGGTTTGCCTCCGGCCTTCTTGGCATGTGTCTTATCTC
FD975795       <-- CATAATGAGATATGGTTTACCTCCGGCGTTCTTGGCATGTGTCTTATCTC
EX909534       <-- CATAATGAGATATGGTTTACCTCCGGCCTTCTTGGCATGTGTCTTATCTC
EX900578       <-- CATAATGAGATATGGTTTACCTCCGGCCTTCTTGGCATGTGTCTTATCTC
EY909582       <-- CATAATGAGATATGGTTTACCTCCGGCGTTCTTGGCATGTGTCTTATCTC
EY909328       <-- CATAATGAGATATGGTTTACCTCCGGCGTTCTTGGCATGTGTCTTATCTC
FD555047       <-- CATAATGAGATATGGTTTACCTCCGGCGTTCTTGGCATGTGTCTTATCTC
EX760232       <-- CATAATGAGATATGGTTTACCTCCGGCCTTCTTGGCATGTGTTTTATCCC
EY901885       <-- .................................................C
EX896688       --> ..................................................
FD564118       --> ..................................................
FD561276       --> ..................................................
EX905874       --> ..................................................
EY905448       --> ..................................................
EY900714       --> ..................................................
EY913017       --> ..................................................
FD956775       --> ..................................................
EX756419       --> ..................................................
EX773028       --> ..................................................
FD559321       --> CATAATGAGATATGGTTTACCTCCG-CGTTCTTGGCATGTGTCTTATCTC

               998    -   1048
UN13522        --> CGGCTGTTAAAAGCGAGAAGAAAGTACGCTCCATTCTTGAACGCTTGTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX776875       <-- CGGCTGTTAAAAGCGAGAAGAAAGTACGCTCCATTCTTGAACGCTTGTGC
FD975795       <-- CGGCTGTTAAAAGCGAGAAGAAAGTACGCTCCATTCTTGAACGCTTGTGC
EX909534       <-- CGGCTGTTAAAAGCGAGAAGAAAGTACGCTCCATTCTTGAACGCTTGCGC
EX900578       <-- CGGCTGTTAAAAGCGAGAAGAAAGTACGCTCCATTCTTGAACGCTTGTGC
EY909582       <-- CGGCTGTTAAAAGCGAGAAGAAAGTACGCTCCATTCTTGAACGCTTGTGC
EY909328       <-- CGGCTGTTAAAAGCGAGAAGAAAGTACGCTCCATTCTTGAACGCTTGTGC
FD555047       <-- CGGCTGTTAAAAGCGAGAAGAAAGTACGCTCCATTCTTGAACGCTTGTGC
EX760232       <-- CGGCTGTTAAAAGCGAGAAGAAAGTACGCTCTATTCTTGAACGCTTGTGC
EY901885       <-- CGGCTGTTAAAAGCGAGAAGAAAGTACGCTCCATTCTTGAACGCTTGTGC
EX896688       --> ..................................................
FD564118       --> ..................................................
FD561276       --> ..................................................
EX905874       --> ..................................................
EY905448       --> ..................................................
EY900714       --> ..................................................
EY913017       --> ..................................................
FD956775       --> ..................................................
EX756419       --> ..................................................
EX773028       --> ..................................................
FD559321       --> CG-CTGTTAAA-GCGAGAAGAA-GTACGCTC-ATTCTTGA-CGCTTGTGC

               1048   -   1098
UN13522        --> GATTCTACTAACAGTTTATACTGGAAAAGCGAGGAGGATGCAGGAGCCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX776875       <-- GATTTTACTAACAGTTTATACTGGAAAAGCGAGGAGGATGCAGGAGCCAT
FD975795       <-- GATTCTACTAACAGTTTATACTGGAAAAGCGAGGAGGATGCA........
EX909534       <-- GATTCTACTAACAGTTTATACTGGAAAAGCGAGGAGGATGCAGGAGCCAT
EX900578       <-- GATTCTACTAACAGTTTATACTGGAAAAGCGAGGAGGATGCAGGAGCCAT
EY909582       <-- GATTCTACTAACAGTTTATACTGGAAAAGCGAGGAGGATGCAGGAGCCAT
EY909328       <-- GATTCTACTAACAGTTTATACTGGAAAAGCGAGGAGGATGCAGGAGCCAT
FD555047       <-- GATTCTACTAACAGTTTATACTGGAAAAGCGAGGAGGATGCAGGAGCCAT
EX760232       <-- GATTCTACTGACAGTTTATACTGGAAAAGCGAGGAGGATGCAGGAGCCAT
EY901885       <-- GATTCTACTAACAGTTTATACTGGAAAAGCGAGGAGGATGCAGGAGCCAT
EX896688       --> ..................................................
FD564118       --> ..................................................
FD561276       --> ..................................................
EX905874       --> ..................................................
EY905448       --> ..................................................
EY900714       --> ..................................................
EY913017       --> ..................................................
FD956775       --> ..................................................
EX756419       --> ..................................................
EX773028       --> ..................................................
FD559321       --> GAT-CTACTAACAGTTTATACTGGAAA-GCGAGGAGGATGCAGGAGC-AT

               1098   -   1148
UN13522        --> GGCTGGTTTAGCCGGTGACTCCGAGACACATCCTTATGTCTCCTTCACGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX776875       <-- GGCTGGTTCAGCCGGTGACTCCGAGACACATCCTTATGTCTCCTTCACGA
FD975795       <-- ..................................................
EX909534       <-- GGCTGGTTTAGCCGGTGACTCCGAGACACATCCTTATGTCTCCTTCACGA
EX900578       <-- GGCTGGTTTAGCCGGTGACTCCGAGACACATCCTTATGTCTCCTTCACGA
EY909582       <-- GGCTGGTTTAGCCGGTGACTCCGAGACACATCCTTATGTCTCCTTCACGA
EY909328       <-- GGCTGGTTTAGCCGGTGACTCCGAGACACATCCTTATGTCTCTTTCACGA
FD555047       <-- GGCTGGTTTAGCCGGTGACTCCGAGACACATCCTTATGTCTCCTTCACGA
EX760232       <-- GGCTGGTTTAGCCGGTGACTCCGAGACACATCCTTATGTCTCCTTCACGA
EY901885       <-- GGCTGGTTTGGCCGGTGATTCCGAGACACATCCTTATGTCTCCTTCACGA
EX896688       --> ..................................................
FD564118       --> ..................................................
FD561276       --> ..................................................
EX905874       --> ..................................................
EY905448       --> ..................................................
EY900714       --> ..................................................
EY913017       --> ..................................................
FD956775       --> ..................................................
EX756419       --> ..................................................
EX773028       --> ..................................................
FD559321       --> GGCTGG............................................

               1148   -   1198
UN13522        --> TCAACCTTGCTTAAAAAAGTTGATGAGAGATGCTTCTTCTACATCTCACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX776875       <-- TCAACCTTGCTTAAAAAAGTTGATGAGAGATGCTTTTTTTACATCTCACA
FD975795       <-- ..................................................
EX909534       <-- TCAACCTTGCTTAAAAAAGTTGATGAGAAATGCTTCTTCTACATCTCACA
EX900578       <-- TCAACCTTGCTTAAAAAAGTTGATGAGAGATGCTTCTTCTACATCTCACA
EY909582       <-- TCAACCTTGCTTAAAAAAGTTGATGAGAGATGCTTCTTCTACATCTCACA
EY909328       <-- TCAACCTTGCTTAAAAAAGTTGATGAGAGATGCTTCTTCTACATCTCACA
FD555047       <-- TCAACCTTGCTTAAAAAAGTTGATGAGAGATGCTTCTTCTACATCTCACA
EX760232       <-- TCAACCTTGCTTAAAAAAGTTGATGAGAGATGCTTCTTCTACATCTCACA
EY901885       <-- TCAACCTTGCTTAAAAAAGTTGATGAGAGATGCTTTTTCTACATCTCAAA
EX896688       --> ..................................................
FD564118       --> ..................................................
FD561276       --> ..................................................
EX905874       --> ..................................................
EY905448       --> ..................................................
EY900714       --> ..................................................
EY913017       --> ..................................................
FD956775       --> ..................................................
EX756419       --> ..................................................
EX773028       --> ..................................................
FD559321       --> ..................................................

               1198   -   1248
UN13522        --> CTTCATCTTTTCTATTTGTTTATGTTCCATATATGTATTCCATTTTATTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX776875       <-- CTTCATCTTTTCTATTTGTTTATGTTCCATATATGTATTCCATTTTATTA  Raphanus raphanistrum subsp. landra
FD975795       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX909534       <-- CTTCATCTTTTCTATTTGTTTATGTTCCATATATGTATTCCATTTTATTA  Raphanus sativus cv Rat-Tail Radish #3870
EX900578       <-- CTTCATCTTTTCTATTTGTTTATGTTCCATATATGTATTCCATTTTATTA  Raphanus sativus cv Early Scarlet Globe
EY909582       <-- CTTCATCTGTTCTATTTGTTTATGTTCCATATATGTATTCCATTTTATTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY909328       <-- CTTCATCTGTTCTATTTGTTTATGTTCCATATATGTATTCCATTTTATTA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD555047       <-- CTTCATCTGTTCTATTTGTTTATGTTCCATATATGTATTCCATTTTATTA  Raphanus raphanistrum subsp. landra
EX760232       <-- CTTCATCTTTTCTATTTGTTTATGTTCCATATATGTATTCCATTTTATTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY901885       <-- CTTCATCTTTTCTATTTGTTTATGTTCCATATATGTATTCCATTTTATTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX896688       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD564118       --> ..................................................  Raphanus sativus var. oleiformis
FD561276       --> ..................................................  Raphanus sativus var. oleiformis
EX905874       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY905448       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY900714       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY913017       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD956775       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX756419       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX773028       --> ..................................................  Raphanus raphanistrum subsp. landra
FD559321       --> ..................................................  Raphanus raphanistrum subsp. landra

               1248   -   1298
UN13522        --> TTCGTGATTTGTTTTGATTATTCGAAATAAAAGTAAAGGTGGCACTCTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX776875       <-- TTCGTGATTTGTTTTGATTATTCGAAATAAAAGT................
FD975795       <-- ..................................................
EX909534       <-- TTCGTGATTTGTTTTGATTATTCGAAATAAAAGTAAAGGTGGCACTCTAG
EX900578       <-- TTCGTGATTTGTTTTGATTATTCGAAATAAAAGTAAAGGTGGCACTCTAG
EY909582       <-- TTCGTGATTTGTTTTGATTATTCGAAATAAAAGTAAAGGTGGCACTCTAG
EY909328       <-- TTCGTGATTTGTTTTGATTATTCGAAATAAAAGTAAAGGTGGCACTCTAG
FD555047       <-- TTCGTGATTTGTTTTGATTATTCGAAATAAAAGTAAAGGTGGCACTCTAG
EX760232       <-- TTCGTGATTTGTTTTGATTATTCGAAATAAAAGTAAAGGTGGCACTCAAG
EY901885       <-- TTCGTGATTTGTTTTGATTATTCGAAATAAAAGTAAAGGTGGCACTCAAG
EX896688       --> ..................................................
FD564118       --> ..................................................
FD561276       --> ..................................................
EX905874       --> ..................................................
EY905448       --> ..................................................
EY900714       --> ..................................................
EY913017       --> ..................................................
FD956775       --> ..................................................
EX756419       --> ..................................................
EX773028       --> ..................................................
FD559321       --> ..................................................

               1298   -   1348
UN13522        --> AGAGACATGTGACTGTAGTTTTATTTTGGCCGGAGTCTTGTAGATTCCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX776875       <-- ..................................................
FD975795       <-- ..................................................
EX909534       <-- AGAGACATGTGACTGTAGTTTTATTTTGGCCGGAGTCTTGTAGATTCGGA
EX900578       <-- AGAGACATGTGACTGTAGTTTTATTTTGGCCGGAGTCTTGTAGATTCGGA
EY909582       <-- AGAGACATGTGACTGTAGTTTTATTTTGGCCGGAGTCTTGTAGATTCCGA
EY909328       <-- AGAGACATGTGACTGTAGTTTTATTTTGGCCGGAGTCTCGTAGATTCCGA
FD555047       <-- AGAGACATGTGACTGTAGTTTTATTTTGGCCGGAGTCTTGTAGATTCCGA
EX760232       <-- AGAGACATGTGACTGTAGTTTTATTTTGGCCGGAGTCTTGTAGATTCCGA
EY901885       <-- AGAGACATGTGACTGTAGTTTTATTTTGGCCGGAGTCTTGTAGATTCCGA
EX896688       --> ..................................................
FD564118       --> ..................................................
FD561276       --> ..................................................
EX905874       --> ..................................................
EY905448       --> ..................................................
EY900714       --> ..................................................
EY913017       --> ..................................................
FD956775       --> ..................................................
EX756419       --> ..................................................
EX773028       --> ..................................................
FD559321       --> ..................................................

               1348   -   1398
UN13522        --> TGAATTTCTGATACTTGTGGAAGAGGGAAGGTTATACAGTATTGTTAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX776875       <-- ..................................................
FD975795       <-- ..................................................
EX909534       <-- TGAATTTCTGATACTTATGGAAGAGGGAAGGTTATACAGT..........
EX900578       <-- TGAATTTCTGATACTTATGGAAGAGGGAAGGTTATACAGTATTGTT....
EY909582       <-- TGAATTTCTGATACTTGTGGAAGAGGGAAGGTTATACAGTATTGTTAAAA
EY909328       <-- TGAATTTCTGATACTTGTGGAAGAGGGAAGGTTATACAGTATTGTTAAAA
FD555047       <-- TGAATTTCTGATACTTGTGGAAGAGGGAAGGTTATACAGTATTGTTAAAA
EX760232       <-- TGAATTTCTGATACTTGTGGAAGAGGGAAGGTTATACAGTATTGTT....
EY901885       <-- TGAATTTCTGATACTTGTGGAAGAGGGAAGGTTATACAGTATTGTTAAAA
EX896688       --> ..................................................
FD564118       --> ..................................................
FD561276       --> ..................................................
EX905874       --> ..................................................
EY905448       --> ..................................................
EY900714       --> ..................................................
EY913017       --> ..................................................
FD956775       --> ..................................................
EX756419       --> ..................................................
EX773028       --> ..................................................
FD559321       --> ..................................................

               1398   -   1448
UN13522        --> CCTTTTGCCATGTTACTTGGATGCCTTGTTTATATTACGCAGATTCGTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX776875       <-- ..................................................
FD975795       <-- ..................................................
EX909534       <-- ..................................................
EX900578       <-- ..................................................
EY909582       <-- CCTTTTGCCATGTTACTTGGATGCCTTGTTTATATTACGCAGATTCGTTT
EY909328       <-- CCTTTTGCCATGTT....................................
FD555047       <-- CCTTTTGCCATGTTACTTGGATGCCTTGTTTATATTACGCAGATTCGTTT
EX760232       <-- ..................................................
EY901885       <-- CCTTTTGCC.........................................
EX896688       --> ..................................................
FD564118       --> ..................................................
FD561276       --> ..................................................
EX905874       --> ..................................................
EY905448       --> ..................................................
EY900714       --> ..................................................
EY913017       --> ..................................................
FD956775       --> ..................................................
EX756419       --> ..................................................
EX773028       --> ..................................................
FD559321       --> ..................................................

               1448   -   1498
UN13522        --> TCACTCT
                   ~~~~~~~
EX776875       <-- .......
FD975795       <-- .......
EX909534       <-- .......
EX900578       <-- .......
EY909582       <-- TCACTCT
EY909328       <-- .......
FD555047       <-- TCACTC.
EX760232       <-- .......
EY901885       <-- .......
EX896688       --> .......
FD564118       --> .......
FD561276       --> .......
EX905874       --> .......
EY905448       --> .......
EY900714       --> .......
EY913017       --> .......
FD956775       --> .......
EX756419       --> .......
EX773028       --> .......
FD559321       --> .......