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Alignment for radish unigene UN13526

               1      -     51
UN13526        --> CGGTGAATAATTGATCATTTTATATATAGAACTCAGAAATATATAGTTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX887523       <-- CGGTGAATAATTGATCATTTTATATATAGAACTCAGAAATATATAGTTCT
EV548256       <-- ..................................................
FD947177       <-- ..................................................
FD981315       <-- ..................................................
EV536134       <-- ..................................................
FY436571       <-- ..................................................
FD535619       <-- ..................................................
EX891658       --> CGGTGAATAATTGATCATTTTATATATAGAACTCAGAAATATATAGTTCT
FD937481       --> .GGTGAATAATTGATCATTTTATATATAGAACTCAGAAATATATAGTTCT
EV546807       --> .gcTGAATAAT-GATCATTTTATATATAGAACTCAGAAATATATAGTTCT
EY928694       --> .gcTGAATAATTGATCATTTTATATATAGAACTCAGAAATATATAGTTCT
EV540650       --> ....aAATAAT-GATCATTTTATATATAGAACTCAGAAATATATAGTTCT

               51     -    101
UN13526        --> ACAACATTTGGCTGATTCTTGAAATTTGCCATACCC-TGAAGAAGAAATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX887523       <-- ACAACATTTGGCTGATTCTTGAAATTTGCCATACCC-TGAAGAAGAAATC
EV548256       <-- ..................................................
FD947177       <-- ..................................................
FD981315       <-- ..................................................
EV536134       <-- ..................................................
FY436571       <-- ..................................................
FD535619       <-- ..................................................
EX891658       --> ACAACATTTGGCTGATTCTTGAAATTTGCCATACCC-TGAAGAAGAAATC
FD937481       --> ACAACATTTGGCTGATTCTTGAAATTTGCCATACCC-TGAAGAAGAAATC
EV546807       --> ACAACATTTGGCTGATTCTTGAAATTTGCCATACCCCTGAAGAAGAAATC
EY928694       --> ACAACATTTGGCTGATTCTTGAAATTTGCCATACCC-TGAAGAAGAAATC
EV540650       --> ACAACATTTGGCTGATTCTTGAAGTTTGCCATACCCCTGAAGAAGAAATC

               101    -    151
UN13526        --> ATCCAGGGTTTATTACTGTTCTCGTACTTCGATAACAAAAATAAAATAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX887523       <-- ATCCAGGGTTTATTACTGTTCTCGTACTTCGATAACAAAAATAAAATAAC
EV548256       <-- ..................................................
FD947177       <-- ..................................................
FD981315       <-- ..................................................
EV536134       <-- ..................................................
FY436571       <-- ..................................................
FD535619       <-- ..................................................
EX891658       --> ATCCAGGGTTTATTACTGTTCTCGTACTTCGATAACAAAAATAAAATAAC
FD937481       --> ATCCAGGGTTTATTACTGTTCTCGTACTTCGATAACAAAAATAAAATAAC
EV546807       --> ATCCAGGGTTTATTACTGTTCTCGTACTTGGATAACAAAAATAAAATAAC
EY928694       --> ATCCAGGGTTTATTACTGTTCTCGTACTTCGATAACAGAAATAAAATAAC
EV540650       --> ATCCAGGGTTTATTACTGTTCTCGTACTTGGATAACAAAAATAAAATAAC

               151    -    201
UN13526        --> TTTCCTCAAAAGGGCTTGACCTTTTTTCTCTCTTTTATTTGTTTAAACCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX887523       <-- TTTCCTCAAAAGGGCTTGACCTTTTTTCTCTCTTTTATTTGTTTAAACCC
EV548256       <-- ...........................CTCTCTTTTATTTGT---TTCCC
FD947177       <-- ...........................CTCTCCTTTATTTGTTTAA-CCC
FD981315       <-- ...............................ttctctctttattgttCCC
EV536134       <-- ..................................................
FY436571       <-- ..................................................
FD535619       <-- ..................................................
EX891658       --> TTTCCTCAAAAGGGCTTGACCTTTTTTCTCTCTTTTATTTGTTTAAACCC
FD937481       --> TTTCCTCAAAAGGGCTTGACCTTTTTTCTCTCTTTTATTTGTTTAAACCC
EV546807       --> TTTCCTCAAAAGGGCTTGACCTTTTTTCTCTCTTTTATTTGTTT---CCC
EY928694       --> TTTCCTCAAAAGGGCTTGACCTTTTTTCTCTCCTTTATTTGTTTAAACCC
EV540650       --> TTTCCTCAAAAGGGCTTGACCTTTTTTCTCTCTTTTATTTGTTTAAACCC

               201    -    251
UN13526        --> TAAAGGCAAACAAAAGAGTCTTTGATAAAAGATCTTTAAACTTAACCTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX887523       <-- TAAAGGCAAACAAAAGAGTCTTTGATAAAAGATCTTTAAACTTAACCTGT
EV548256       <-- TAAAGGCAAACAAAAGAGTCTTTGATAAAAGATCTTTAAACTTAACCTGT
FD947177       <-- TAAAGGCAAACAAAAGAGTCTTTGATAAA-GATCTTTAAACTTAAC-TGT
FD981315       <-- TAAAGGCAAACAAAAGAGTCTTTGATAAAAGATCTTTAAACTTAAC-TGT
EV536134       <-- ..................................................
FY436571       <-- ..................................................
FD535619       <-- ..................................................
EX891658       --> TAAAGGCAAACAAAAGAGTCTTTGATAAAAGATCTTTAAACTTAACCTGT
FD937481       --> TAAAGGCAAACAAAAGAGTCTTTGATAAAAGATCTTTAAACTTAACCTGT
EV546807       --> TAAAGGCAAACAAAAGAGTCTTTGATAAAAGATCTTTAAACTTAACCTGT
EY928694       --> TAAAGGCAAACAAAAGAGTCTTTGATAAA-GATCTTTAAACTTAACCTGT
EV540650       --> TAAAGGCAAACAAAAGAGTCTTTGATAAAAGATCTTTAAACTTAACCTGT

               251    -    301
UN13526        --> TTCAGAGTCCTCGAGGTACTGAGAGTGCGACGCAGCGAGTAGCGCAGCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX887523       <-- TTCAGAGTCCTCGAGGTACTGAGAGTGCGAGGCAGCGAGTAGCGCAGCTC
EV548256       <-- TTCAGAGTCCTCGAGGTACTGAGAGTGCGACGCAGCGAGTAGCGCAGCTC
FD947177       <-- TTCAGAGTCCTCGAGGTACTGAGAGTGCGACGCAGCGAGTAGCGCAGCTC
FD981315       <-- TTCAGAGTCCTCGAGGTACTGAGAGTGCGACGCAGCGAGTAGCGCAGCTC
EV536134       <-- TTCAGAGTCCTCGAGATACTGAGAGTGCGACGCAGCGAGTAGCGCAGCTC
FY436571       <-- ...AGAGTCCTCGAGGTACTGAGAGTGCGAGGCAGCGAGTAGCGCAGCTC
FD535619       <-- ..................................................
EX891658       --> TTCAAAGTCCTCGAGGTACTGAGAGTGCGAGGCAGCGAGTAGCGCAGCTC
FD937481       --> TTCAGAGTCCTCGAGGTACTGAGAGTGCGAGGCAGCGAGTAGCGCAGCTC
EV546807       --> TTCAGAGTCCTCGAGGTACTGAGAGTGCGACGCAGCGAGTAGCGCAGCTC
EY928694       --> TTCAGAGTCCTCGAGGTACTGAGAGTGCGACGCAGCGAGTAGCGCAGCTC
EV540650       --> TTCAGAGTCCTCGAGATACTGAGAGTGCGACGCAGCGAGTAGCGCAGCTC

               301    -    351
UN13526        --> CAACGCCAGATCCATCATTCGAATGAATCACCTCCACGCTCTCTGATGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX887523       <-- CAACGCCAGATCCATCATTCGAATGAATCACCTCCACGCTCTCTGATGCT  Raphanus sativus var. oleiformis
EV548256       <-- CAACGCCAGATCCATCATTCGAATGAATCACATCAACGCTCTCTGATGCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD947177       <-- CAACGCCAGATCCATCATTCGAATGAATCACCTCCACGCTCTCTGATGCT  Raphanus sativus cv Early Scarlet Globe
FD981315       <-- CAACGCCAGATCCATCATTCGAATGAATCACATCAACGCTCTCTGATGCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV536134       <-- CAACGCCAGATCCATCATTCGAATGAATCACATCAACGCTCTCTGATGCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FY436571       <-- CAACGCCAGATCCATCATTCGAATGAATCACCTCCACGCTCTCTGATGCT  Raphanus sativus cv GSK3-1
FD535619       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX891658       --> CAACGCCAGATCCATCATTCGAATGAATCACCTCCACGCTCTCTGATGCT  Raphanus sativus var. oleiformis
FD937481       --> CAACGCCAGATCCATCATTCGAATGAATCACCTCCACGCTCTCTGATGCT  Raphanus sativus var. oleiformis
EV546807       --> CAACGCCAGATCCATCATTCGAATGAATCACATCAACGCTCTCTGATGCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY928694       --> CAACGCCAGATCCATCATTCGAATGAATCACCTCCACGCTCTCTGATGCT  Raphanus sativus var. oleiformis
EV540650       --> CAACGCCAGATCCATCATTCGAATGAATCACATCAACGCTCTCTGATGCT  Raphanus raphanistrum subsp. raphanistrum (MS)

               351    -    401
UN13526        --> TCATCTCCAAGCAACTCTTTCAATGAGCTCTCCATACACTCGCTGAACTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX887523       <-- TCATCTCCAAGCAACTCTTTCAATGAGCTCTCCATACACTCGCTGAACTG  Raphanus sativus var. oleiformis
EV548256       <-- TCATCACCAAGCAACTCTTTCAATGAGCTCTCCATACACTCGCTGAACTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD947177       <-- TCATCTCCAAGCAACTCTTTCAATGAGCTCTCCATACACTCGCTGAACTG  Raphanus sativus cv Early Scarlet Globe
FD981315       <-- TCATCACCAAGCAACTCTTTCAATGAGCTCTCCATACACTCGCTGAACTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV536134       <-- TCATCACCAAGCAACTCTTTCAATGAGCTCTCCATACACTCGCTGAACTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FY436571       <-- TCATCTCCAAGCAACTCTTTCAATGAGCTCTCCATACACTCGCTGAACTG  Raphanus sativus cv GSK3-1
FD535619       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX891658       --> TCATCTCCAAGCAACTCTTTCAATGAGCTCTCCATACACTCGCTGAACTG  Raphanus sativus var. oleiformis
FD937481       --> TCATCTCCAAGCAACTCTTTCAATGAGCTCTCCATACACTCGCTGAACTG  Raphanus sativus var. oleiformis
EV546807       --> TCATCACCAAGCAACTCTTTCAATGAGCTCTCCATACACTCGCTGAACTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY928694       --> TCATCTCCAAGCAACTCTTTCAATGAGCTCTCCATACACTCGCTGAACTG  Raphanus sativus var. oleiformis
EV540650       --> TCATCACCAAGCAACTCTTTCAATGAGCTCTCCATACACTCGCTGAACTG  Raphanus raphanistrum subsp. raphanistrum (MS)

               401    -    451
UN13526        --> AGTGTAGTGCTCAAACAGTCCACCGTCCATGGCTATCACAGATTTCTGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX887523       <-- AGTGTAGTGCTCAAACAGTCCACCGTCCATGGCTATCACAGATTTCTGTG  Raphanus sativus var. oleiformis
EV548256       <-- AGTGTAGTGCTCAAACAGCCCACCGTCCATGGCTATAACAGATTTCTGCG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD947177       <-- AGTGTAGTGCTCAAAGAGACCACCGTCCATGGCTATCACAGATTTCTGTG  Raphanus sativus cv Early Scarlet Globe
FD981315       <-- AGTGTAGTGCTCAAACAGCCCACCGTCCATGGCTATAACAGATTTCTGCG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV536134       <-- AGTGTAGTGCTCAAACAGCCCACCGTCCATGGCTATAACAGATTTCTGCG  Raphanus raphanistrum subsp. raphanistrum (MS)
FY436571       <-- AGTGTAGTGCTCAAACAGTCCACCGTCCATGGCTATCACAGATTTCTGTG  Raphanus sativus cv GSK3-1
FD535619       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX891658       --> AGTGTAGTGCTCAAACAGTCCACCGTCCATGGCTATCACAGATTTCTGTG  Raphanus sativus var. oleiformis
FD937481       --> AGTGTAGTGCTCAAACAGTCCACCGTCCACGGCTATCACAGATTTCTGTG  Raphanus sativus var. oleiformis
EV546807       --> AGTGTAGTGCTCAAACAGCCCACCGTCCATGGCTATAACAGATTTCTGCG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY928694       --> AGTGTAGTGCTCAAACAGTCCACCGTCCATGGCTATCACAGATTTCTGTG  Raphanus sativus var. oleiformis
EV540650       --> AGTGTAGTGCTCAAACAGCCCACCGTCCATGGCTATAACAGATTTCTGCG  Raphanus raphanistrum subsp. raphanistrum (MS)

               451    -    501
UN13526        --> TTTCTCCGTCTTTTGGTGTGTCTCTTCCTATCTTCTTGAGGATTCCGTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX887523       <-- TTTCTCCGTCTTTTGGTGTGTCTCTTCCTATCTTCTTGAGGATTCCGTAG
EV548256       <-- TTTCTCCGTCTTTTGGTGTGTCTCTTCCTATCTTCTTGAGGATTCCGTAG
FD947177       <-- TTTCTCCGTCTTTTGGTGTGTCTCTTCCTATCTTCTTGAGGATTCCGTAG
FD981315       <-- TTTCTCCGTCTTTTGGTGTGTCTCTTCCTATCTTCTTGAGGATTCCGTAG
EV536134       <-- TTTCTCCGTCTTTTGGTGTGTCTCTTCCTATCTTCTTGAGGATTCCGTAG
FY436571       <-- TTTCTCCGTCTTTTGGTGTGTCTCTTCCTATCTTCTTGAGGATTCCGTAG
FD535619       <-- ........................................GATTC-GTAG
EX891658       --> TTTCTCCGTCTTTTGGTGTGTCTCTTCCTATCTTCTTGAGGATTCCGTAA
FD937481       --> TTTCTCCGTCTTTTGGTGTGTCTCTTCCTATCTTCTTGAGGATTCCGTAA
EV546807       --> TTTCTCCGTCTTTTGGTGTGTCTCTTCCTATCTTCTTGAGGATTCCGTAA
EY928694       --> TTTCTCCGTCTTTTGGTGTGTCTCTTCCTATCTTCTTGAGGATTCCGTAG
EV540650       --> TTTCTCCGTCTTTTGGTGTGTCTCTTCCTATCTTCTTGAGGATTCCGTAA

               501    -    551
UN13526        --> ATCCCTGCAGCTGATAGACGAGCTCCTCGGCAAGCAATGATGTCACAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX887523       <-- ATCCCTGCAGCTGATAGACGAGCTCCTCGGAAAGCAATGATGTCACAGAG  Raphanus sativus var. oleiformis
EV548256       <-- ATCCCTGCAGCTGATAGACGAGCTCCTCGGCTAGCAATGATGTCACAGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD947177       <-- ATCCCTGCAGCTGATAGACGAGCTCCTCGGGAAGCAATGATGTCACAGAG  Raphanus sativus cv Early Scarlet Globe
FD981315       <-- ATCCCTGCAGCTGATAGACGAGCTCCTCGGCTAGCAATGATGTCACAGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV536134       <-- ATCCCTGCAGCTGATAGACGAGCTCCTCGGCTAGCAATGATGTCACAGAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FY436571       <-- ATCCCTGCAGCTGATAGACGAGCTCCTCGGGAAGCAATGATGTCACAGAG  Raphanus sativus cv GSK3-1
FD535619       <-- ATCC-TGCAGCTGATAGACGAGCTCCTCGGGAAGCAATGATGTCACAGAG  Raphanus raphanistrum subsp. maritimus
EX891658       --> ATCCCTGCAGCTGATAGACGAGCTCCTCGGAAAGCAATGATGTCACAGAG  Raphanus sativus var. oleiformis
FD937481       --> ATCCCTGCAGCT......................................  Raphanus sativus var. oleiformis
EV546807       --> ATCCCTGCAGCTGATAGACGAGCTCCTCGGCTAGCAATGATGTAACAGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY928694       --> ATCCCTGCAGCTGATAGACGAGCTCCTCGGGAAGCAATGATGTCACAGAG  Raphanus sativus var. oleiformis
EV540650       --> ATCCCTGCAGCTGATAGACGAGCTCCTCGGCTAGCAATGATGTCACAGAG  Raphanus raphanistrum subsp. raphanistrum (MS)

               551    -    601
UN13526        --> ACGGATCACAACTTTTCTCATTTTCAGAGAAGTGGTAGGGACCTCCAATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX887523       <-- ACGGATCACAACTTCTCTCATTTTCAGAGAAGTGGTAGGGACCTCCAATA  Raphanus sativus var. oleiformis
EV548256       <-- ACGGATCACAACTTTTCTCATCTTCAGAGAAGTGGTAGGGACCTCCAATA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD947177       <-- ACGGATCACAACTTTTCTCATTTTCAGAGAAGTGGTAGGGACCTCCAATA  Raphanus sativus cv Early Scarlet Globe
FD981315       <-- ACGGATCACAACTTTTCTCATCTTCAGAGAAGTGGTAGGGACCTCCAATA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV536134       <-- ACGGATCACAACTTTTCTCATCTTCAGAGAAGTGGTAGGGACCTCCAATA  Raphanus raphanistrum subsp. raphanistrum (MS)
FY436571       <-- ACGGATCACAACTTTTCTCATTTTCAGAGAAGTGGTAGGGACCTCCAATA  Raphanus sativus cv GSK3-1
FD535619       <-- ACGGATCACAACTTTTCTCATTT-CAGAGAAGTGGTAGGGACCTCCAATA  Raphanus raphanistrum subsp. maritimus
EX891658       --> ACGGATCACAACTTCTCTCATTTTCAGAGAAGTGGTAGGGACCTCCAATA  Raphanus sativus var. oleiformis
FD937481       --> ..................................................  Raphanus sativus var. oleiformis
EV546807       --> ACGGATCACAACTTTTCTCATctt..........................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY928694       --> ACGGATCACAACTTTTCTCATTTTCAGAGAAGTGGTAGGGACCTCCAATA  Raphanus sativus var. oleiformis
EV540650       --> ACGGATCACAACTTTTCTCATCTTCAGAGAAGTGGTAGGGACCTCCAATA  Raphanus raphanistrum subsp. raphanistrum (MS)

               601    -    651
UN13526        --> TGTCCTTTAACTTGCTTCCAACAACCTTCAAATCCGGAGAAGTGTCGCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX887523       <-- TGTCCT............................................
EV548256       <-- TGTCCTTTAACTTGCTTCCAACAACCTTCAAATCCGGAGAAGTGTCGCTG
FD947177       <-- TGTCCTTTAACTTGCTTCCAACAACCTTCAAATCCGGAGAAGTGTCGCTG
FD981315       <-- TGTCCTTTAACTTGCTTCCAACAACCTTCAAATCCGGAGAAGTGTCGCTG
EV536134       <-- TGTCCTTTAACTTGCTTCCAACAACCTTCAAATCCGGAGAAGTGTCGCTG
FY436571       <-- TGTCCTTTAACTTGCTTCCAACAACCTTCAAATCCGGAGAAGTGTCGCTG
FD535619       <-- TGTCCTTTAACTTGCTTCCAACAACCTTCAAATCCGGAGAAGTGTCGCTG
EX891658       --> TGTCCT............................................
FD937481       --> ..................................................
EV546807       --> ..................................................
EY928694       --> TGTCCTTTAACTTGATTCCAACAACCTTCAAATCCGGAGAAGTGTCGCTG
EV540650       --> TGTCCTTTAACTTGCTTCCAACAACCTTCAAATCCGGAGAAGTGTCGCTG

               651    -    701
UN13526        --> TGCATAGCAGACATGTTTGGTGTCCTTATAATGAATGGTATTCTCAGCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX887523       <-- ..................................................
EV548256       <-- TGCATAGCAGACATGTTTGGTGTCCTTATAATGAATGGTATTCTCAGCTT
FD947177       <-- TGCATAGCAGACATGTTTGGTGTCCTTATAATGAATGGTATTCTCAGCTT
FD981315       <-- TGCATAGCAGACATGTTTGGTGTCCTTATAATGAATGGTATTCTCAGCTT
EV536134       <-- TGCATAGCAGACATGTTTGGTGTCCTTATAATGAATGGTATTCTCAGCTT
FY436571       <-- TGCATAGCAGACATGTTTGGTGTCCTTATAATGAATGGTATTCTCAGCTT
FD535619       <-- TGCATAGCAGACATGTTTGGTGTCCTTATAATGAATGGTATTCTCAGCTT
EX891658       --> ..................................................
FD937481       --> ..................................................
EV546807       --> ..................................................
EY928694       --> TGCATAGCAGACATGTTTGGTGTCCTTATAATGAATGGTATTCTCAGCTT
EV540650       --> TGCATAGCAGACATGTTTGGTGTCCTTATAATGAATGGTATTCTCAGCTT

               701    -    751
UN13526        --> AGGTGGGACAGAGTCACCAAAGAAAGCAGCCTCGTCAGCCATTTTCAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX887523       <-- ..................................................
EV548256       <-- AGGTGGGACAGAGTCACCAAAGAAAGCAGCCTCGTCAGCCATTTTCAGAA
FD947177       <-- AGGTGGGACAGAGTCACCAAAGAAAGCAGCCTCGTCAGCCATTTTCAGAA
FD981315       <-- AGGTGGGACAGAGTCACCAAAGAAAGCAGCCTTGTCAGCCATTTTCAGAA
EV536134       <-- AGGTGGGACAGAGTCACCAAAGAAAGCAGCCTCGTCAGCCATTTTCAGAA
FY436571       <-- AGGTGGGACAGAGTCACCAAAGAAAGCAGCCTCGTCAGCCATTTTCAGAA
FD535619       <-- AGGTGGGACAGAGTCACCAAAGAAAGCAGCCTCGTCAGCCATTTTCAGAA
EX891658       --> ..................................................
FD937481       --> ..................................................
EV546807       --> ..................................................
EY928694       --> AGGTGGAACAGAGTCACCAAAGAAAGCAGCCTCGTCAGCCATTTTCAGAA
EV540650       --> AGGTGGGACAGAGTCACCAAAGAAAGCAGCCTCGTCAGCCATTTTCAGAA

               751    -    801
UN13526        --> GAACTCTCCGCAAGATTTCTCCCAGATACATACCCGAAATGATTTTCTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX887523       <-- ..................................................
EV548256       <-- GAACTCTCCGCAAGATTTCTCCCAGATACATACCCGAAATGATTTTCTCA
FD947177       <-- GAACTCTCCGCAAGATTTCTCCCAGATACATACCCGAAATGATTTTCTCA
FD981315       <-- GAACTCTCCGCAAGATTTCTCCCAGATACATACCCGAAATGATTTTCTCA
EV536134       <-- GAACTCTCCGCAAGATTTCTCCCAGATACATACCCGAAATGATTTTCTCA
FY436571       <-- GAACTCTCCGCAAGATTTCTCCCAGATACATACCCGAAATGATTTTCTCA
FD535619       <-- GAACTCTCCGCAAGATTTCTCCCAGATACATACCCGAAATGATTTTCTCA
EX891658       --> ..................................................
FD937481       --> ..................................................
EV546807       --> ..................................................
EY928694       --> GAACTCTCCACAAGATTTCTCCCAGATACATACCCGAAATGATTTTCTCA
EV540650       --> GAACTCTCCGCAAGATTTCTCCCAGATACATACCCGAAATGATTTTCTCA

               801    -    851
UN13526        --> AGAATCTGTTCACCAGGATTCAGACTGTCGAAATCAAGCAAGTGGTCGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX887523       <-- ..................................................
EV548256       <-- AGAATCTGTTCACCAGGATTCAGACTGTCGAAATCAAGCAAGTGGTCGTA
FD947177       <-- AGAATCTGTTCACCAGGATTCAGACTGTCGAAATCAAGCAAGTGGTCGTA
FD981315       <-- AGAATCTGTTCACCAGGATTCAGACTGTCGAAATCAAGCAAGTGGTCGTA
EV536134       <-- AGAATCTGTTCACCAACATTCAGCCTGTCGAAATCAAGCAAGTGGTCGTA
FY436571       <-- AGAATCT-TTCACCAGGATTCAGAC.........................
FD535619       <-- AGGATCTGTTCACCAGGATTCAGACTGTCGAAATCAAGCAAGTGGTCGTA
EX891658       --> ..................................................
FD937481       --> ..................................................
EV546807       --> ..................................................
EY928694       --> AGAATCTGTTCACCAGGATTCAGACTGTCGAAATCAAGCAAGTGGTCGTA
EV540650       --> AGAATCTGTTCACCAACATTCAGCCTGTCGAAATCAAGCAAGTGGTCGTA

               851    -    901
UN13526        --> CTCTGTCAATGGAAGATGTGATGACCTGAAGTTTCCCCACTCCATGTTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX887523       <-- ..................................................
EV548256       <-- CTCTGTCAATGGAAGATGTGATGACCTGAAGTTTCCCCACTCCAcc....
FD947177       <-- CTCTGTCAATGGAAGATGTGATGACCTGAAGTTTCCCCACTCCATGTTGA
FD981315       <-- CTCTGTCAATGGAAGATGCGATGACCTGAAGTTTCCCCACTCCATGTTGA
EV536134       <-- CTCTGTCAATGGAAGATGTGATGACCTGAAGTTTCCCCACTCCATGTTGA
FY436571       <-- ..................................................
FD535619       <-- CTCTGTCAATGGAAGATGTGATGACCTGAAGTTTCCCCACTCCATGTTGA
EX891658       --> ..................................................
FD937481       --> ..................................................
EV546807       --> ..................................................
EY928694       --> CTCTGTCAATGGAAGATGTGATGACCTGAA....................
EV540650       --> CTCTGTCAATGGAAGATGTGATGACCTGAAGTTTCCCCACTCCATGTTGA

               901    -    951
UN13526        --> TCACCATTTCTCCGGATTTGGGAAGTAAGCCGTGCCATTTTGGAATGGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX887523       <-- ..................................................
EV548256       <-- ..................................................
FD947177       <-- TCACCATTTCTCCGGATTTGGGAAGTAAGCCGTGCCAac...........
FD981315       <-- TCACCATTTCc.......................................
EV536134       <-- TCACCATTTCTCCGGATTTGGGAAGTAAGCCGTGCCATTTTGGAATGGCA
FY436571       <-- ..................................................
FD535619       <-- TCACCATTTCTCCGGATTTGGGAAGTAAGCCGTGCCATTTTGGAATGGCA
EX891658       --> ..................................................
FD937481       --> ..................................................
EV546807       --> ..................................................
EY928694       --> ..................................................
EV540650       --> TCA...............................................

               951    -   1001
UN13526        --> TGTGCTCGTTCGACATAAGCTGCATTAGTGCCAGTGCCTAAGATAACAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX887523       <-- ..................................................
EV548256       <-- ..................................................
FD947177       <-- ..................................................
FD981315       <-- ..................................................
EV536134       <-- TGTGCTCGTTCGACATAAGCTGCATTAGTGCCAGTGCCTAAGATAACAGC
FY436571       <-- ..................................................
FD535619       <-- TGTGCACGTTCGACATAAGCTGCATTAGTGCCAGTGCCTAAAATAACAGC
EX891658       --> ..................................................
FD937481       --> ..................................................
EV546807       --> ..................................................
EY928694       --> ..................................................
EV540650       --> ..................................................

               1001   -   1051
UN13526        --> GGCTACAACATCCGGGTTATAGTATCTACCACCAGCTAGTGTTCCAACCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX887523       <-- ..................................................
EV548256       <-- ..................................................
FD947177       <-- ..................................................
FD981315       <-- ..................................................
EV536134       <-- GGCTACAACATCCGGGTTAcc.............................
FY436571       <-- ..................................................
FD535619       <-- GGCTACAACATCCGGGTTATAGTATCTACCACCAGCTAGTGTTCCAACCG
EX891658       --> ..................................................
FD937481       --> ..................................................
EV546807       --> ..................................................
EY928694       --> ..................................................
EV540650       --> ..................................................

               1051   -   1101
UN13526        --> TATCATTAACAAGGGCTGTGACGTTCATGTCAAGCCCAACTCTTTCCATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX887523       <-- ..................................................
EV548256       <-- ..................................................
FD947177       <-- ..................................................
FD981315       <-- ..................................................
EV536134       <-- ..................................................
FY436571       <-- ..................................................
FD535619       <-- TATCATTAACAAGGGCTGTGACGTTCATGTCAAGCCCAACTCTTTCCATA
EX891658       --> ..................................................
FD937481       --> ..................................................
EV546807       --> ..................................................
EY928694       --> ..................................................
EV540650       --> ..................................................

               1101   -   1151
UN13526        --> GCTTTAACAAGCTCCCCCACCACATCTTGTCCAACCTACACCATCATCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX887523       <-- ..................................................
EV548256       <-- ..................................................
FD947177       <-- ..................................................
FD981315       <-- ..................................................
EV536134       <-- ..................................................
FY436571       <-- ..................................................
FD535619       <-- GCTTTAACAAGCTCCCCCACCACATCTTGTCCAACCTACACCATCATCCC
EX891658       --> ..................................................
FD937481       --> ..................................................
EV546807       --> ..................................................
EY928694       --> ..................................................
EV540650       --> ..................................................

               1151   -   1201
UN13526        --> CAGCGACAGGTAGAAACAGAGTTCAGAAAGAGCACTATCTTATGTAATAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX887523       <-- ..................................................
EV548256       <-- ..................................................
FD947177       <-- ..................................................
FD981315       <-- ..................................................
EV536134       <-- ..................................................
FY436571       <-- ..................................................
FD535619       <-- CAGCGACAGGTAGAAACAGAGTTCAGAAAGAGCACTATCTTATGTAATAA
EX891658       --> ..................................................
FD937481       --> ..................................................
EV546807       --> ..................................................
EY928694       --> ..................................................
EV540650       --> ..................................................

               1201   -   1251
UN13526        --> AGTTGAAATAAAATGATCAAAGCTCAACTGTATCTTCGATGGAGAAGCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX887523       <-- ..................................................
EV548256       <-- ..................................................
FD947177       <-- ..................................................
FD981315       <-- ..................................................
EV536134       <-- ..................................................
FY436571       <-- ..................................................
FD535619       <-- AGTTGAAATAAAATGATCAAAGCTCAACTGTATCTTCGATGGAGAAGCCT
EX891658       --> ..................................................
FD937481       --> ..................................................
EV546807       --> ..................................................
EY928694       --> ..................................................
EV540650       --> ..................................................

               1251   -   1301
UN13526        --> C
                   ~
EX887523       <-- .
EV548256       <-- .
FD947177       <-- .
FD981315       <-- .
EV536134       <-- .
FY436571       <-- .
FD535619       <-- C
EX891658       --> .
FD937481       --> .
EV546807       --> .
EY928694       --> .
EV540650       --> .