-6     -     44
UN13618        --> .......GGGGTTTCGGCGGAATTAGGGTTAGACATGGCGGCTTCATCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD573294       <-- ........GGGTTTCGGTGGAATTAGGGTTAGACATGGCGGCTTCATCGA  Raphanus sativus cv Early Scarlet Globe
EY918099       <-- agacatattGGTTTCGGCGGAATTAGGGTTAGACATGGCGGCTTCATCGA  Raphanus raphanistrum subsp. landra
EX768180       <-- ...............................GACATGGCGGCTTCATCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX775240       <-- ................................................GA  Raphanus raphanistrum subsp. landra
EX767910       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD547761       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD574324       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY943215       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD584172       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD567652       <-- ..................................................  Raphanus sativus var. oleiformis
FD961474       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY911068       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD538581       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY947286       --> .......GGGGTTTCGGCGGAATTAGGGTTAGACATGGCGGCTTCATCGA  Raphanus sativus cv Rat-Tail Radish #3870
FD542534       --> ......gGGGTTTTCGGTGGAATTAGGGTTAGACATGGCGGCTTCATCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD564085       --> .......GGGGTTTCGGTGGAATTAGGGTTAGACATGGCGGCTTCATCGA  Raphanus sativus var. oleiformis
FD580366       --> .......GGGGTTTCGGCGGAATTAGGGTTAGACATGGCGGCTTCATCGA  Raphanus sativus cv Rat-Tail Radish #3870
FD939496       --> ......gGGGTTTTCGGTGGAATTAGGGTTAGACATGGCGGCTTCATCGA  Raphanus sativus var. oleiformis
EX771114       --> ......gcGGGTTTCGGCGGAATTAGGGTTAGACATGGCGGCTTCATCGA  Raphanus raphanistrum subsp. landra
FD569014       --> ........GGGTTTCGGTGGAATTAGGGTTAGACATGGCGGCTTCATCGA  Raphanus sativus cv Early Scarlet Globe
EV527784       --> ..ggatattGGTTTCGGCGGAATTAGGGTTAGACATGGCGGCTTCATCGA  Raphanus raphanistrum subsp. maritimus
EX764215       --> ....ggattGGTTTCGGCGGAATTAGGGTTAGACATGGCGGCTTCATCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY915167       --> ..ggatattGGTTTCGGCGGAATTAATGTTAGACATGGCGGCTTCATCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY922062       --> agacatattGGTTTCGGCGGAATTAGGGTTAGACATGGCGGCTTCATCGA  Raphanus raphanistrum subsp. landra
FD570287       --> ......ggtGGTTTCGGTGGAATTAGGGTTAGACATGGCGGCTTCATCGA  Raphanus sativus cv Early Scarlet Globe
FD965849       --> .........................GGGTTAGACATGGCGGCTTCATCGA  Raphanus raphanistrum subsp. maritimus
EX763882       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               44     -     94
UN13618        --> GTAGAGTAGATTACGAAATCATCACCGATCCGTTCGATCCACGATGTGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD573294       <-- GTAGAGTAGATTACGAAATCATCACCGATCCGTTCGATCCACGATGTGTG
EY918099       <-- GTAGAGTAGATTACGAAATCATCACCGATCCGTTCGATCCACGATGTGTG
EX768180       <-- GTAGAGTAGATTACGAAATCATCACCGATCCGTTCGATCCACGATGTGTG
EX775240       <-- GTAGAGTAGATTACGAAATCATCACCGATCCGTTCGATCCACGATGTGTG
EX767910       <-- .............gGAAATCATCACCGATCCGTTCGATCCACGATGTGTG
FD547761       <-- ...............AAATCATCACCGATCCGTTCGATCCACGATGTGTG
FD574324       <-- ................................TTCGATCCACGATGTGTG
EY943215       <-- .........................................CGATGTGTG
FD584172       <-- ..................................................
FD567652       <-- ..................................................
FD961474       <-- ..................................................
EY911068       <-- ..................................................
FD538581       <-- ..................................................
EY947286       --> GTAGAGTAGATTACGAAATCATCACCGATCCGTTCGATCCACGATGTGTG
FD542534       --> ATAGAGTAGATTACGAAATCATCACCGATCCGTTCGATCCACGATGTGTG
FD564085       --> GTAGAGTAGATTACGAAATCATCACCGATCCGTTCGATCCACGATGTGTG
FD580366       --> GTAGAGTAGATTACGAAATCATCACCGATCCGTTCGATCCACGATGTGTG
FD939496       --> GTAGAGTAGATTACGAAATCATCACCGATCCGTTCGATCCACGATGTGTG
EX771114       --> GTAGAGTAGATTACGAAATCATCACCGATCCGTTCGATCCACGATGTGTG
FD569014       --> GTAGAGTAGATTACGAAATCATCACCGATCCGTTCGATCCACGATGTGTG
EV527784       --> GTAGAGTAGATTACGAAATCATCACCGATCCGTTCGATCCACGATGTGTG
EX764215       --> GTAGAGTAGATTACGAAATCATCACCGATCCGTTCGATCCACGATGTGTG
EY915167       --> GTAGAGTAGATTACGAAATCATCACCGATCCGTTCGATCCACGATGTGTG
EY922062       --> GTAGAGTAGATTACGAAATCATCACCGATCCGTTCGATCCACGATGTGTG
FD570287       --> GTAGAGTAGATTACGAAATCATCACCGATCCGTTCGATCCACGATGTGTG
FD965849       --> GTAGAGTAGATTACGAAATCATCACCGATCCGTTCGATCCACGATGTGTG
EX763882       --> .............gGAAATCATCACCGATCCGTTCGATCCACGATGTGTG

               94     -    144
UN13618        --> GTTGCATGCTTTAAGAACCTCTTTGGAGAACTGACCAAGAAGGATAAGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD573294       <-- GTTGCATGCTTTAAGAACCTCTTTGGAGAACTGACCAAGAAGGATAAGCT
EY918099       <-- GTTGCATGCTTTAAGAACCTCTTTGGAGAACTGACCAAGAAGGATAAGCT
EX768180       <-- GTTGCATGCTTTAAGAACCTCTTTGGAGAACTGACCAAGAAGGATAAGCT
EX775240       <-- GTTGCATGCTTTAAGAACCTCTTTGGAGAACTGACCAAGAAGGATAAGCT
EX767910       <-- GTTGCATGCTTTAAGAACCTCTTTGGAGAACTGACCAAGAAGGATAAGCT
FD547761       <-- GTTGCATGCTTTAAGAACCTCTTTGGGGAACTGACCAAGAAGGATAAGCT
FD574324       <-- GTTGCATGCTTTAAGAACCTCTTTGGAGAACTGACCAATAAGGATAAGCT
EY943215       <-- GTTGCATGCTTTAAGAAC-TCTTTGGAGAACTGACCAAGAAGGATAAGCT
FD584172       <-- ........CTTTAAGAACCTCTTTGGAGAACTGACCAAGAAGGATAAGCT
FD567652       <-- ............AAGAACCTCTTTGGAGAACTGACCAAGAAGGATAAGCT
FD961474       <-- ......................TTGGAGAACTGACCAAGAAGGATAAGCT
EY911068       <-- ..................................................
FD538581       <-- ..................................................
EY947286       --> GTTGCATGCTTTAAGAACCTCTTTGGAGAACTGACCAAGAAGGATAAGCT
FD542534       --> GTTGCATGCTTTAAGAACCTCTTTGGGGAACTGACCAAGAAGGATAAGCT
FD564085       --> GTTGCATGCCTTAAGAACCTCTTTGGAGAACTGACCAAGAAGGATAAGCT
FD580366       --> GTTGCATGCTTTAAGAACCTCTTTGGAGAACTGACCAAGAAGGATAAGCT
FD939496       --> GTTGCATGCTTTAAGAACCTCTTTGGAGAACTGACCAAGAAGGATAAGCT
EX771114       --> GTTGCATGCTTTAAGAACCTCTTTGGAGAACTGACCAAGAAGGATAAGCT
FD569014       --> GTTGCATGCTTTAAGAACCTCTTTGGAGAACTGACCAAGAAGGATAAGCT
EV527784       --> GTTGCATGCTTTAAGAACCTCTTTGGAGAACTGACCAAGAAGGATAAGCT
EX764215       --> GTTGCATGCTTTAAGAACCTCTTTGGAGAACTGACCAAGAAGGATAAGCT
EY915167       --> GTTGCATGCTTTAAGAACCTCTTTGGAGAACTGACCAAGAAGGATAAGCT
EY922062       --> GTTGCATGCTTTAAGAACCTCTTTGGAGAACTGACCAAGAAGGATAAGCT
FD570287       --> GTTGCATGCTTTAAGAACCTCTTTGGAGAACTGACCAATAAGGATAAGCT
FD965849       --> GTTGCATGCTTTAAGAACCTCTTTGGAGAACTGACCAAGAAGGATAAGCT
EX763882       --> GTTGCATGCTTTAAGAACCTCTTTGGAGAACTGACCAAGAAGGATAAGCT

               144    -    194
UN13618        --> TCTGCTGAAGAGGATGCGAGGGAAAGAGGACAAAACGAGTCCAAAGGACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD573294       <-- TCTGCTGAAGAGGATGCGAGGGAAAGAGGACGATACGAGTCCAAAGGACA  Raphanus sativus cv Early Scarlet Globe
EY918099       <-- TCTGCTGAAGAGGATGCGAGGGAAAGAGGACAAAACGAGTCCAAAGGACA  Raphanus raphanistrum subsp. landra
EX768180       <-- TCTGCTGAAGAGGATGCGAGGGAAAGAGGACAAAACGAGTCCAAAGGACA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX775240       <-- TCTGCTGAAGAGGATGCGAGGGAAAGAGGACAAAACGAGTCCAAAGGACA  Raphanus raphanistrum subsp. landra
EX767910       <-- TCTGCTGAAGAGGATGCGAGGGAAAGAGGACGATACGGGTCCAAAGGACA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD547761       <-- TCTGCTGAAGAGGATGCGAGGGAAAGAGGACAAAACGAGTCCAAAGGACA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD574324       <-- TCTGCTGAAGAGGATGCGAGGGAAAGAGGACGATACGAGTCCAAAGGACA  Raphanus sativus cv Early Scarlet Globe
EY943215       <-- TCTGCTGAAGAGGATGCGAGGGAAAGAGGACAAAACGAGTCCAAAGGACA  Raphanus sativus cv Rat-Tail Radish #3870
FD584172       <-- TCTGCTGAAGAGGATGCGAGGGAAAGAGGACAAAACGAGTCCAAAGGACA  Raphanus sativus cv Rat-Tail Radish #3870
FD567652       <-- TCTGCTGAAGAGGATGCGAGGGAAAGAGGACGATACGAGTCCAAAGGACA  Raphanus sativus var. oleiformis
FD961474       <-- TCTGCTGAAGAGGATGCGAGGGAAAGAGGACAAAACGAGTCCAAAGGACA  Raphanus raphanistrum subsp. maritimus
EY911068       <-- .................GAGGGAAAGAGGACAAAACGAGTCCAAAGGACA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD538581       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY947286       --> TCTGCTGAAGAGGATGCGAGGGAAAGAGGACAAAACGAGTCCAAAGGACA  Raphanus sativus cv Rat-Tail Radish #3870
FD542534       --> TCTGCTGAAGAGGATGCGAGGGAAAGAGGACGATACGAGTCCAAAGGACA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD564085       --> TCTGCTGAAGAGGATGCGAGGGAAAGAGGACGATACGAGTCCAAAGGACA  Raphanus sativus var. oleiformis
FD580366       --> TCTGCTGAAGAGGATGCGAGGGAAAGAGGACAAAACGAGTCCAAAGGACA  Raphanus sativus cv Rat-Tail Radish #3870
FD939496       --> TCTGCTGAAGAGGATGCGAGGGAAAGAGGACGATACGAGTCCAAAGGACA  Raphanus sativus var. oleiformis
EX771114       --> TCTGCTGAAGAGGATGCGAGGGAAAGAGGACAAAACGAGTCCAAAGGACA  Raphanus raphanistrum subsp. landra
FD569014       --> TCTGCTGAAGAGGATGCGAGGGAAAGAGGACGATACGAGTCCAAAGGACA  Raphanus sativus cv Early Scarlet Globe
EV527784       --> TCTGCTGAAGAGGATGCGAGGGAAAGAGGACAAAACGAGTCCAAAGGACA  Raphanus raphanistrum subsp. maritimus
EX764215       --> TCTGCTGAAGAGGATGCGAGGGAAAGAGGACAAAACGAGTCCAAAGGACA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY915167       --> TCTGCTGAAGAGGATGCGAGGGAAAGAGGACAAAACGAGTCCAAAGGACA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY922062       --> TCTGCTGAAGAGGATGCGAGGGAAAGAGGACAAAACGAGTCCAAAGGACA  Raphanus raphanistrum subsp. landra
FD570287       --> TCTGCTGAAGAGGATGCGAGGGAAAGAGGACGATACGAGTCCAAAGGACA  Raphanus sativus cv Early Scarlet Globe
FD965849       --> TCTGCTGAAGAGGATGCGAGGGAAAGAGGACAAAACGAGTCCAAAGGACA  Raphanus raphanistrum subsp. maritimus
EX763882       --> TCTGCTGAAGAGGATGCGAGGGAAAGAGGACGATACGGGTCCAAAGGACA  Raphanus raphanistrum subsp. raphanistrum (NY)

               194    -    244
UN13618        --> CCCCACAGGAGGAACGCGATCTCATCAACGAACAGATCAGGAAGTCACAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD573294       <-- CCCCACAGGAGGAACGCGATCTCATCAACGAACAGATCAGGAAGTCACAG
EY918099       <-- CCCCACAGGAGGAACGCGATCTCATCAACGAACAGATCAGGAAGTCACAG
EX768180       <-- CCCCACAGGAGGAACGCGATCTCATCAACGAACAGATCAGGAAGTCACAG
EX775240       <-- CCCCACAGGAGGAACGCGATCTCATCAACGAACAGATCAGGAAGTCACAG
EX767910       <-- CCCCACAGGAGGAACGCGATCTCATCAACGAACAGATCAGGAAGTCACAG
FD547761       <-- CCCCACAGGAGGAACGCGATCTCATCAACGAACAGATCAGGAAGTCACAG
FD574324       <-- CCCCACAGGAGGAACGCGATCTCATCAACGAACGGATCAGGAAGTCACAG
EY943215       <-- CCCCACAGGAGGAACGCGATCTCATCAACGAACAGATCAGGAAGTCACAG
FD584172       <-- CCCCACAGGAGGAACGCGATCTCATCAACGAACAGATCAGGAAGTCACAG
FD567652       <-- CCCCACAGGAGGAACGCGATCTCATCAACGAACAGATCAGGAAGTCACAG
FD961474       <-- CCCCACAGGAGGAACGCGATCTCATCAACGAACAGATCAGGAAGTCACAG
EY911068       <-- CCCCACAGGAGGAACGCGATCTCATCAACGAACAGATCAGGAAGTCACAG
FD538581       <-- ..................................................
EY947286       --> CCCCACAGGAGGAACGCGATCTCATCAACGAACAGATCAGGAAGTCACAG
FD542534       --> CCCCACAGGAGGAACGCGATCTCATCAACGAACAGATCAGGAAGTCACAG
FD564085       --> CCCCACAGGAGGAACGCGATCTCATCAACGAACAGATCAGGAAGTCACAG
FD580366       --> CCCCACAGGAGGAACGCGATCTCATCAACGAACAGATCAGGAAGTCACAG
FD939496       --> CCCCACAGGAGGAACGCGATCTCATCAACGAACAGATCAGGAAGTCACAG
EX771114       --> CCCCACAGGAGGAACGCGATCTCATCAACGAACAGATCAGGAAGTCACAG
FD569014       --> CCCCACAGGAGGAACGCGATCTCATCAACGAACAGATCAGGAAGTCACAG
EV527784       --> CCCCACAGGAGGAACGCGATCTCATCAACGAACAGATCAGGAAGTCACAG
EX764215       --> CCCCACAGGAGGAACGCGATCTCATCAACGAACAGATCAGGAAGTCACAG
EY915167       --> CCCCACAGGAGGAACGCGATCTCATCAACGAACAGATCAGGAAGTCACAG
EY922062       --> CCCCACAGGAGGAACGCGATCTCATCAACGAACAGATCAGGAAGTCACAG
FD570287       --> CCCCACAGGAGGAACGCGATCTCATCAACGAACGGATCAGGAAGTCACAG
FD965849       --> CCCCACAGGAGGAACGCGATCTCATCAACGAACAGATCAGGAAGTCACAG
EX763882       --> CCCCACAGGAGGAACGCGATCTCATCAACGAACAGATCAGGAAGTCACAG

               244    -    294
UN13618        --> GGATTTGACGTGGATTTTTCCAAGTTCCGATGCCTTTTTGATTTCTACGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD573294       <-- GGATTTGACGTGGATTTTTCCAAGTTCCGATGCCTTTTTGATTTTTACGC
EY918099       <-- GGATTTGACGTGGATTTTTCCAAGTTCCGATGCCTTTTTGATTTCTACGC
EX768180       <-- GGATTTGACGTGGATTTTTCCAAGTTCCGATGCCTTTTTGATTTCTACGC
EX775240       <-- GGATTTGACGTGGATTTTTCCAAGTTCCGATGCCTTTTTGATTTTTACGC
EX767910       <-- GGATTTGACGTGGATTTTTCCAAGTTCCGATGCCTTTTTGATTTTTACGC
FD547761       <-- GGATTTGACGTGGATTTTTCCAAGTTCCGATGCCTTTTTGATTTCTACGC
FD574324       <-- GGATTTGACGTGGATTTTTCCAAGTTCCGATGCCTTTTTGATTTCTACGC
EY943215       <-- GGATTTGACGTGGATTTTTCCAAGTTCCGATGCCTTTTTGATTTCTACGC
FD584172       <-- GGATTTGACGTGGATTTTTCCAAGTTCCGATGCCTTTTTGATTTCTACGC
FD567652       <-- GGATTTGACGTGGATTTTTCCAAGTTCCGATGCCTTTTTGATTTCTACGC
FD961474       <-- GGATTTGACGTGGATTTTTCCAAGTTCCGATCCCTTTTTGATTTCTACGC
EY911068       <-- GGATTTGACGTGGATTTTTCCAAGTTCCGATGCCTTTTTGATTTTTACGC
FD538581       <-- ..................................................
EY947286       --> GGATTTGACGTGGATTTTTCCAAGTTCCGATGCCTTTTTGATTTCTACGC
FD542534       --> GGATTTGACGTGGATTTTTCCAAGTTCCGATGCCTTTTTGACTTCTACGC
FD564085       --> GGATTTGACGTGGATTTTTCCAAGTTCCGATGCCTTTTTGATTTCTACGC
FD580366       --> GGATTTGACGTGGATTTTTCCAAGTTCCGATGCCTTTTTGATTTCTACGC
FD939496       --> GGATTTGACGTGGATTTTTCCAAGTTCCGATGCCTTTTTGATTTCTACGC
EX771114       --> GGATTTGACGTGGATTTTTCCAAGTTCCGATGCCTTTTTGATTTCTACGC
FD569014       --> GGATTTGACGTGGATTTTTCCAAGTTCCGATGCCTTTTTGATTTCTACGC
EV527784       --> GGATTTGACGTCGATTTTTCCAAGTTCCGATGCCTTTTTGATTTCTACGC
EX764215       --> GGATTTGACGTGGATTTTTCCAAGTTCCGATGCCTTTTTGATTTCTACGC
EY915167       --> GGATTTGACGTGGATTTTTCCAAGTTCCGATGCCTTTTTGATTTCTACGC
EY922062       --> GGATTTGACGTGGATTTTTCCAAGTTCCGATGCCTTTTTGATTTCTACGC
FD570287       --> GGATTTGACGTGGATTTTTCCAAGTTCCGATGCCTTTTTGATTTCTACGC
FD965849       --> GGATTTGACGTGGATTTTTCCAAGTTCCGATCCCTTTTTGATTTCTACGC
EX763882       --> GGATTTGACGTGGATTTTTCCAAGTTCCGATGCCTTTTTGATTTCTACGC

               294    -    344
UN13618        --> TGCTTTCCATGTCGATGAAAGACATTCAAACGTAATAAGAGAAACCGATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD573294       <-- TGCTTTCCATGTCGATGAAAGACATTCAAACGTAATAAGAGAAACCGATA
EY918099       <-- TGCTTTCCATGTCGATGAAAGACATTCAAACGTAATAAGAGAAACCGATA
EX768180       <-- TGCTTTCCATGTCGATGAAAGACATTCAAACGTAATAAGAGAAACCGATA
EX775240       <-- TGCTTTCCATGTCGATGAAAGACATTCAAACGTAATAAGAGAAACCGATA
EX767910       <-- TGCTTTCCATGTCGATGAAAGACATTCAAACGTAATAATAGAAACCGATA
FD547761       <-- TGCTTTCCATGTCGATGAAAGACATTCAAACGTAATAAGAGAAACCGATA
FD574324       <-- TGCTTTCCATGTCGATGAAAGACATTCAAACGTAATAAGAGAAACCGATA
EY943215       <-- TGCTTTCCATGTCGATGAAAGACATTCAAACGTAATAAGAGAAACCGATA
FD584172       <-- TGCTTTCCATGTCGATGAAAGACATTCAAACGTAATAAGAGAAACCGATA
FD567652       <-- TGCTTTCCATGTCGATGAAAGACATTCAAACGTAATAAGAGAAACCGATA
FD961474       <-- TGCTTTCCATGTCGATGAAAGACAATCAAACGTAATAAGAGAAACCGATA
EY911068       <-- TGCTTTCCATGTCGATGAAAGACATTCAAACGTAATAAGAGAAACCGATA
FD538581       <-- .................AAAGACATTCAAACGTAATAAGAGAAACCGATA
EY947286       --> TGCTTTCCATGTCGATGAAAGACATTCAAACGTAATAAGAGAAACCGATA
FD542534       --> TGCTTTCCATGTCGATGAAAGACATTCAAACGTAATAAGAGAAACCGATA
FD564085       --> TGCTTTCCATGTCGATGAAAGACATTCAAACGTAATAAGAGAAACCGATA
FD580366       --> TGCTTTCCATGTCGATGAAAGACATTCAAACGTAATAAGAGAAACCGATA
FD939496       --> TGCTTTCCATGTCGATGAAAGACATTCAAACGTAATAAGAGAAACCGATA
EX771114       --> TGCTTTCCATGTCGATGAAAGACATTCAAACGTAATAAGAGAAACCGATA
FD569014       --> TGCTTTCCATGTCGATGAAAGACATTCAAACGTAATAAGAGAAACCGATA
EV527784       --> TGCTTTCCGTGTCGATGAAAGACATTCAAACGTAATAAGAGAAACCGATA
EX764215       --> TGCTTTCCATGTCGATGAAAGACATTCAAACGTAATAAGAGAAACCGATA
EY915167       --> TGCTTTCCATGTCGATGAAAGACATTCAAACGTAATAAGAGAAACCGATA
EY922062       --> TGCTTTCCATGTCGATGAAAGACATTCAAACGTAATAAGAGAAACCGATA
FD570287       --> TGCTTTCCATGTCGATGAAAGACATTCAAACGTAATAAGAGAAACCGATA
FD965849       --> TGCTTTCCATGTCGATGAAAGACAATCAAACGTAATAAGAGAAACCGATA
EX763882       --> TGCTTTCCATGTCGATGAAAGACATTCAAACGTAATAATAGAAACCGATA

               344    -    394
UN13618        --> GGCAGTTTTTCAGAAGATTGGCTCAGGAAGCCATTGCGAATTACAACACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD573294       <-- GGCAGTTTTTCAGAAGATTGGCTCAGGAAGCCATTGCGGATTACAACACT  Raphanus sativus cv Early Scarlet Globe
EY918099       <-- GGCAGTTTTTCAGAAGATTGGCTCAGGAAGCCATTGCGAATTACAACACT  Raphanus raphanistrum subsp. landra
EX768180       <-- GGCAGTTTTTCAGAAGATTGGCTCAGGAAGCCATTGCGAATTACAACACT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX775240       <-- GGCAGTTTTTCAGAAGATTGGCTCAGGAAGCCATTGCGAATTACAACACT  Raphanus raphanistrum subsp. landra
EX767910       <-- GGCAGTTTTTCAGAAGATTGGCTCAGGAAGCCATTGCGAATTACAACACT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD547761       <-- GGCAGTTTTTCAGAAGATTGGCTCAGGAAGCCATTGCGAATTACAACACT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD574324       <-- GGCAGTTTTTCAGAAGATTGGCTCAGGAAGCCATTGCGGATTACAACACT  Raphanus sativus cv Early Scarlet Globe
EY943215       <-- GGCGGTTTTTCAGAAGATTGGCTCAGGAAGCCATTGCGGATTACAACACT  Raphanus sativus cv Rat-Tail Radish #3870
FD584172       <-- GGCAGTTTTTCAGAAGATTGGCTCAGGAAGCCATTGCGGATTACAACACT  Raphanus sativus cv Rat-Tail Radish #3870
FD567652       <-- GGCAGTTTTTCAGAAGATTGGCTCAGGAAGCCATTGCGGATTACAACACT  Raphanus sativus var. oleiformis
FD961474       <-- GGCAGTTTTTCAGAAGATTGGCTCAGGAAGCCGTTGCGAATTACAACACT  Raphanus raphanistrum subsp. maritimus
EY911068       <-- GGCAGTTTTTC--AAGATTGGCTCAGGAAGCCATTGCGAATTACAACACT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD538581       <-- GGCAGTTTTTCAGAAGATTGGCTCAGGAAGCCATTGCGAATTACAACACT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY947286       --> GGCGGTTTTTCAGAAGATTGGCTCAGGAAGCCATTGCGGATTACAACACT  Raphanus sativus cv Rat-Tail Radish #3870
FD542534       --> GGCAGTTTTTCAGAAGATTGGCTCAGGAAGCCATTGCGAATTACAACACT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD564085       --> GGCAGTTTTTCAGAAGATTGGCTCAGGAAGCCATTGCGGATTACAACACT  Raphanus sativus var. oleiformis
FD580366       --> GGCAGTTTTTCAGAAGATTGGCTCAGGAAGCCATTGCGGATTACAACACT  Raphanus sativus cv Rat-Tail Radish #3870
FD939496       --> GGCAGTTTTTCAGAAGATTGGCTCAGGAAGCCATTGCGAATTACAACACT  Raphanus sativus var. oleiformis
EX771114       --> GGCAGTTTTTCAGAAGATTGGCTCAGGAAGCCATTGCGGATTACAACACT  Raphanus raphanistrum subsp. landra
FD569014       --> GGCAGTTTTTCAGAAGATTGGCTCAGGAAGCCATTGCGGATTACAACACT  Raphanus sativus cv Early Scarlet Globe
EV527784       --> GGCAGTTTTTCAGAAGATTGGCTCAGGAAGCCATTGCGAATTACAACACT  Raphanus raphanistrum subsp. maritimus
EX764215       --> GGCAGTTTTTCAGAAGATTGGCTCAGGAAGCCATTGCGAATTACAACACT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY915167       --> GGCAGTTTTTCA--AGATTGGCTCAGGAAGCCATTGCGAATTACAACACT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY922062       --> GGCAGTTTTTCAGAAGATTGGCTCAGGAAGCCATTGCGAATTACAACACT  Raphanus raphanistrum subsp. landra
FD570287       --> GGCAGTTTTTCAGAAGATTGGCTCAGGAAGCCATTGCGGATTACAACACT  Raphanus sativus cv Early Scarlet Globe
FD965849       --> GGCAGTTTTTCAGAAGATTGGCTCAGGAAGCCGTTGCGAATTACAACACT  Raphanus raphanistrum subsp. maritimus
EX763882       --> GGCAGTTTTTCAGAAGATTGGCTCAGGAAGCCATTGCGAATTACAACACT  Raphanus raphanistrum subsp. raphanistrum (NY)

               394    -    444
UN13618        --> AGAGAGGGGACCAGGTTTGAATTTGTTGAGGTCGAGAAAGCAAATGTGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD573294       <-- AGAGAGGGGACCAGGTTTGAATTTGTTGAGGTCGAGAAAGCAAATGTGTA
EY918099       <-- AGAGAGGGGACCAGGTTTGAATTTGTTGAGGTCGAGAAAGCAAATGTGTA
EX768180       <-- AGAGAGGGGACCAGGTTTGAATTTGTTGAGGTCGAGAAAGCAAATGTGTA
EX775240       <-- AGAGAGGGGACCAGGTTTGAATTTGTTGAGGTCGAGAAAGCAAATGTGTA
EX767910       <-- AGAGAGGGGACCAGGTTTGAATTTGTTGAGGTCGAGAAAGCAAATGTGTA
FD547761       <-- AGAGAGGGGACCAGGTTTGAATTTGTTGAGGTCGAGAAAGCAAATGTGTA
FD574324       <-- AGAGAGGGGACCAGGTTTGAATTTGTTGAGGTCGAGAAAGCAAATGTGTA
EY943215       <-- AGAGAGGGGACCAGGTTTGAATTTGTTGAGGTCGAGAAAGCAAATGTGTA
FD584172       <-- AGAGAGGGGACCAGGTTTGAATTTGTTGAGGTCGAGAAAGCAAATGTGTA
FD567652       <-- AGAGAGGGGACCAGGTTTGAATTTGTTGAGGTCGAGAAAGCAAATGTGTA
FD961474       <-- AGATAGGGGACCAGGTTTGAATTTGTTGAGGTCGAGAAAGCAAATGTGTA
EY911068       <-- AGAGAGGGGACCAGGTTTGAATTTGTTGAGGTCGAGAAAGCAAATGTGTA
FD538581       <-- AGAGAGGGGACCAGGTTTGAATTTGTTGAGGTCGAGAAAGCAAATGTGTA
EY947286       --> AGAGAGGGGACCAGGTTTGAATTTGTTGAGGTCGAGAAAGCAAATGTGTA
FD542534       --> AGAGAGGGGACCAGGTTTGAATTTGTTGAGGTCGAGAAAGCAAATGTGTA
FD564085       --> AGAGAGGGGACCAGGTTTGAATTTGTTGAGGTCGAGAAAGCAAATGTGTA
FD580366       --> AGAGAGGGGACCAGGTTTGAATTTGTTGAGGTCGAGAAAGCAAATGTGTA
FD939496       --> AGAGAGGGGACCAGGTTTGAATTTGTTGAGGTCGAGAAAGCAAATGTGTA
EX771114       --> AGAGAGGGGACCAGGTTTGAATTTGTTGAGGTCGAGAAAGCAAATGTGTA
FD569014       --> AGAGAGGGGACCAGGTTTGAATTTGTTGAGGTCGAGAAAGCAAATGTGTA
EV527784       --> AGAGAGGGGACCAGGTTTGAATTTGTTGAGGTCGAGAAAGCAAATGTGTA
EX764215       --> AGAGAGGGGACCAGGTTTGAATTTGTTGAGGTCGAGAAAGCAAATGTGTA
EY915167       --> AGAGAGGGGACCAGGTTTGAATTTGTTGAGGTCGAGAAAGCAAATGTGTA
EY922062       --> AGAGAGGGGACCAGGTTTGAATTTGTTGAGGTCGAGAAAGCAAATGTGTA
FD570287       --> AGAGAGGGGACCAGGTTTGAATTTGTTGAGGTCGAGAAAGCAAATGTGTA
FD965849       --> AGATAGGGGACCAGGTTTGAATTTGTTGAGGTCGAGAAAGCAAATGTGTA
EX763882       --> AGAGAGGGGACCAGGTTTGAATTTGTTGAGGTCGAGAAAGCAAATGTGTA

               444    -    494
UN13618        --> TAGTAATAGTGGATTCATTTACTTCATCACCTTTGTAGCCAAAGATCCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD573294       <-- TAGTAATAGTGGATTCATTTACTTCATCACCTTTGTAGCCAAAGATCCTT
EY918099       <-- TAGTAATAGTGGATTCATTTACTTCATCACCTTTGTAGCCAAAGATCCTT
EX768180       <-- TAGTAATAGTGGATTCATTTACTTCATCACCTTTGTAGCCAAAGATCCTT
EX775240       <-- TAGTAATAGTGGATTCATTTACTTCATCACCTTTGTAGCCAAAGATCCTT
EX767910       <-- CAGTAATAGTGGATTCATTTACTTCATCACCTT-GTAGCCAAAGATCCTT
FD547761       <-- TAGTAATAGTGGATTCATTTACTTCATCACCTTTGTAGCCAAAGATCCTT
FD574324       <-- TAGTAATAGTGGATTCATT-ACTTCATCACCTTTGTAGCCAAAGATCCTT
EY943215       <-- TAGTAATAGTGGATTCATTTACTTCATCACCTTTGTAGCCAAAGATCCTT
FD584172       <-- TAGTAATAGTGGATTCATTTACTTCATCACCTTTGTAGCCAAAGATCCTT
FD567652       <-- TAGTAATAGTGGATTCATTTACTTCATCACCTTTGTAGCCAAAGATCCTT
FD961474       <-- TAGTAATAGTGGATTCATTTACTTCATCACCTTTGTAGCCAAAGATCCTT
EY911068       <-- TAGTAATAGTGGATTCATTTACTTCATCACCTTTGTAGCCAAAGATCCTT
FD538581       <-- TAGTAATAGGGGATTCATTTACTTCATCCCCTTTGTAGCCAAAAATCCTT
EY947286       --> TAGTAATAGTGGATTCATTTACTTCATCACCTTTGTAGCCAAAGATCCTT
FD542534       --> TAGTAATAGTGGATTCATTTACTTCATCACCTTTGTAGCCAAAGATCCTT
FD564085       --> TAGTAATAGTGGATTCATTTACTTCATCACCTTTGTAGCCAAAGATCCTT
FD580366       --> TAGTAATAGTGGATTCATTTACTTCATCACCTTTGTAGCCAAAGATCCTT
FD939496       --> CAGTAATAGTGGATTCATTTACTTCATCACCTTTGTAGCCAAAGATCCTT
EX771114       --> TAGTAATAGTGGATTCATTTACTTCATCACCTTTGTAGCCAAAGATCCTT
FD569014       --> TAGTAATAGTGGATTCATTTACTTCATCACCTTTGTAGCCAAAGATCCTT
EV527784       --> TAGTAATAGTGGATTCATTTACTTCATCACCTTTGTAGCCAAAGATCCTT
EX764215       --> TAGTAATAGTGGATTCATTTACTTCATCACCTTTGTAGCCAAAGATCCTT
EY915167       --> TAGTAATAGTGGATTCATTTACTTCATCACCTTTGTAGCCAAAGATCCTT
EY922062       --> TAGTAATAGTGGATTCATTTACTTCATCACCTTTGTAGCCAAAGATCCTT
FD570287       --> TAGTAATAGTGGATTCATT-ACTTCATCACCTTTGTAGCCAAAGATCCTT
FD965849       --> TAGTAATAGTGGATTCATTTACTTCATCACCTTTGTAGCCAAAGATCCTT
EX763882       --> CAGTAATAGTGGATTCATTTACTTCATCACCTT-GTAGCCAAAGATCCTT

               494    -    544
UN13618        --> GCGACCAGACAAAAGTGTTTCAAGCTAAGGTCATCAATGTTTTCTGTAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD573294       <-- GCGACCAGTCAAAAGTGTTTCAAGCTAAGGTCATCAATGTTTTCTGTAGA  Raphanus sativus cv Early Scarlet Globe
EY918099       <-- GCGACCAGACAAAAGTGCTTCAAGCTAAGGTCATCAATGTTTTCTGTAGA  Raphanus raphanistrum subsp. landra
EX768180       <-- GCGACCAGACAAAAGTGTTTCAAGCTAAGGTCATCAATGTTTTCTGTAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX775240       <-- GCGACCAGACAAAAGTGTTTCAAGCTAAGGTCATCAATGTTTTCTGTAGA  Raphanus raphanistrum subsp. landra
EX767910       <-- GCGACCAGACAAAAGTGTTTCAAGCTAAGGTCATCAATGTTTTCTGTAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD547761       <-- GCGACCAGACAAAAGTGTTTCAAGCTAAGGTCATCAATGTTTTCTGTAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD574324       <-- GCGACCAGTCAAAAGTGTTTCAAGCTAAGGTCATCAATGTTTTCTGTAGA  Raphanus sativus cv Early Scarlet Globe
EY943215       <-- GCGACCAGTCAAAAGTGTTTCAAGCTAAGGTCATCAATGTTTTCTGTAGA  Raphanus sativus cv Rat-Tail Radish #3870
FD584172       <-- GCGACCAGTCAAAAGTGTTTCAAGCTAAGGTCATCAATGTTTTCTGTAGA  Raphanus sativus cv Rat-Tail Radish #3870
FD567652       <-- GCGACCAGTCAAAAGTGTTTCAAGCTAAGGTCATCAATGTTTTCTGTAGA  Raphanus sativus var. oleiformis
FD961474       <-- GCGACCAGACAAAAGTGTTTCAAGCTAAGGTCACCAATGTTTTCTGTAGA  Raphanus raphanistrum subsp. maritimus
EY911068       <-- GCGACCAGACAAAAGTGTTTCAAGCTAAGGTCATCAATGTTTTCTGTAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD538581       <-- GCGACCAGACAAAAGTGTTTCAAGCTAAGGTCATCAATGTTTTCTGTAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY947286       --> GCGACCAGTCAAAAGTGTTTCAAGCTAAGGTCATCAATGTTTTCTGTAGA  Raphanus sativus cv Rat-Tail Radish #3870
FD542534       --> GCGACCAGACAAAAGTGTTTCAAGCTAAGGTCATCAATGTTTTCTGTAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD564085       --> GCGACCAGTCAAAAGTGTTTCAAGCTAAGGTCATCAATGTTTTCTGTAGA  Raphanus sativus var. oleiformis
FD580366       --> GCGACCAGTCAAAAGTGTTTCAAGCTAAGGTCATCAATGTTTTCTGTAGA  Raphanus sativus cv Rat-Tail Radish #3870
FD939496       --> GCGACCAGACAAAAGTGTTTCAAGCTAAGGTCATCAATGTTTTCTGTAGA  Raphanus sativus var. oleiformis
EX771114       --> GCGACCAGTCAAAAGTGTTTCAAGCTAAGGTCATCAATGTTTTCTGTAGA  Raphanus raphanistrum subsp. landra
FD569014       --> GCGACCAGTCAAAAGTGTTTCAAGCTAAGGTCATCAATGTTTTCTGTAGA  Raphanus sativus cv Early Scarlet Globe
EV527784       --> GCGACCAGACAAAAGTGTTTCAAACTAAGGTCATCAATGTTTTCTGTAGA  Raphanus raphanistrum subsp. maritimus
EX764215       --> GCGACCAGACAAAAGTGTTTCAAGC.........................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY915167       --> GCGACCAGACAAAAGTGTTTCAAGCTAAGGTCATCAATGTTTTCTGTAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY922062       --> GCGACCAGACAAAAGTGCTTCAAGCTAAGGTCATCAATGTTTTCTGTAGA  Raphanus raphanistrum subsp. landra
FD570287       --> GCGACCAGTCAAAAGTGTTTCAAGCTAAGGTCATCAATGTTTTCTGTAGA  Raphanus sativus cv Early Scarlet Globe
FD965849       --> GCGACCAGACAAAAGTGTTTCAAGCTAAGGTCACCAATGTTTTCTGTAGA  Raphanus raphanistrum subsp. maritimus
EX763882       --> GCGACCAGACAAAAGTGTTTCAAGCTAAGGTCATCAATGTTTTCTGTAGA  Raphanus raphanistrum subsp. raphanistrum (NY)

               544    -    594
UN13618        --> GAGATTGTGCACAGCTTCTGCAGGCTTAAACCCCGTCAACAAG---AATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD573294       <-- GAGATTGTGCACAGCTTCTGCAGGCTTAAACCCCGTCAACAAG---AATG
EY918099       <-- GAGATTGTGCACAGCTTCTGCAGGCTTAAACCCCGTCAACAAG---AATG
EX768180       <-- GAGATTGTGCACAGCTTCTGCAGGCTTAAACCCCGTCAACAAG---AATG
EX775240       <-- GAGATTGTGCACAGCTTCTGCAGGCTTAAACCCCGTCAACAAG---AATG
EX767910       <-- GAGATTGTGCACAGCTTCTGCAGGCTTAAACCCCGTCAACAAG---AATG
FD547761       <-- GAGATTGTGCACAGCTTCTGCAGGCTTAAACCCCGTCAACAAG---AATG
FD574324       <-- GAGATTGTGCGCAGCTTCTGCAGGCTTAAACCCCGTCAACAAG---AATG
EY943215       <-- GAGATTGTGCACAGCTTCTGCAGGCTTAAACCCCGTCAACAAG---AATG
FD584172       <-- GAGATTGTGCACAGCTTCTGCAGGCTTAAACCCCGTCAACAAG---AATG
FD567652       <-- GAGATTGTGCACAGCTTCTGCAGGCTTAAACCCCGTCAACAAGTAGAATG
FD961474       <-- GAGATTGTGCACAGCTTCTGCAGGCTTAAACCCCGTCAACAAG---AATG
EY911068       <-- GAGATTGTGCACAGCTTCTGCAGGCTTAAACCCCGTCAACAAG---AATG
FD538581       <-- GAGATTGTGCACAGCTTTTGCAGGCTTAAACCCCGTCAACAAG---AATG
EY947286       --> GAGATTGTGCACAGCTTCTGCAGGCTTAAACCCCGTCAACAAG---AATG
FD542534       --> GAGATTGTGCACAGCTTCTGCAGGCTTAAACCCCGTCAACAAG---AATG
FD564085       --> GAGATTGTGCACAGCTTCTGCAGGCTTAAACCCCGTCAACAAGTAGAATG
FD580366       --> GAGATTGTGCACAGCTTCTGCAGGCTTAAACCCCGTCAACAAG---AATG
FD939496       --> GAGATTGTGCACAGCTTCTGCAGGCTTAAACCCCGTCAACAAGTAGAATG
EX771114       --> GAGATTGTGCACAGCTTCTGCAGGCTTAAACCCCGTCAACAAG---AATG
FD569014       --> GAGATTGTGCACAGCTTCTGCAGGCTTAAACCCCGTCAACAAG---AATG
EV527784       --> GAGATTGTGCACAGCTTCTGCAGGCTTAAACCCCGTCAACAAG---AATG
EX764215       --> ..................................................
EY915167       --> GAGATTGTGCACAGCTTCTGCAGGCTTAAACCCCGTCAACAAG---AATG
EY922062       --> GAGATTGTGCACAGCTTCTG..............................
FD570287       --> GAGATTGTGCGCAGCTTCTGCAGGCTTAAACCCCGTCAACAAG---AATG
FD965849       --> GAGATTGTGCACAGCTTCTGCAGGCTTAAACCCCGTCAACAAG---AATG
EX763882       --> GAGATTGTGCACAGCTTCTGCAGGCTTAAACCCCGTCAACAAG---AATG

               594    -    644
UN13618        --> CGATGAAGCTAGGAGAGTTGTGAAGAAACCAA-GGTATAATACAAGATCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD573294       <-- CGATGAAGCTAGGAGAGTTGTGAAGAAACCAA-GGTATAATACAAGATCA  Raphanus sativus cv Early Scarlet Globe
EY918099       <-- CGATGAAGCTAGGAGAGTTGTGAAGAAACCGA-GGTATAATACAAGATCA  Raphanus raphanistrum subsp. landra
EX768180       <-- CGATGAAGCTAGGAGAGTTGTGAAGAAACCGA-GTTATAATACAAGATCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX775240       <-- CGATGAAGCTAGGAGAGTTGTGAAGAAACCGA-GGTATAATACAAGATCA  Raphanus raphanistrum subsp. landra
EX767910       <-- CGATGAAGCTAGGAGAGTTGTGAAGAAACCAA-GGTATAATACAAGATCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD547761       <-- CGATGAAGCTAGGAGAGTTGTGAAGAAACCGA-GGTATAATACAAGATCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD574324       <-- CGATGAAGCTAGGAGAGTTGTGAAGAAACCAA-GGTATAATACAAGATCA  Raphanus sativus cv Early Scarlet Globe
EY943215       <-- CGATGGCTCTAGGAGAGTTGTGAAGAAACCAAAGGTATAATACAAGATCA  Raphanus sativus cv Rat-Tail Radish #3870
FD584172       <-- CGATGACTCTAGGAGAGTTGTGAAGAAACCAAAGGTATAATACAAGATCA  Raphanus sativus cv Rat-Tail Radish #3870
FD567652       <-- CGATGAAGCTAGGAGAGTTGTGAAGAAACCAA-GGTATAATACAAGATCA  Raphanus sativus var. oleiformis
FD961474       <-- CGATGAAGCTAGGAGAGTTGTGAAGAAACCGA-GGTATAATACAAGATCA  Raphanus raphanistrum subsp. maritimus
EY911068       <-- CGATGAAGCTAGGAGAGTTGTGAAGAAACCGA-GGTATAATACAAGATCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD538581       <-- CGATGAAGCTAGGAGAGTTGTGAAGAAACCAA-GGTATAATACAAGATCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY947286       --> CGATGGCTCTAGGAGAGTTGTGAAGAAACCAAATGTATAATACAAGATCA  Raphanus sativus cv Rat-Tail Radish #3870
FD542534       --> CGATGAAGCTAGGAGAGTTGTGAAGAAACCAA-GGTATAATACAAGATCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD564085       --> CGATGAAGCTAGGAGAGTTGTGAAGAAACCAA-GGTATAATACAAGATCA  Raphanus sativus var. oleiformis
FD580366       --> CGATGACTCTAGGAGAGTTGTGAAGAAACCAAAGGTATAATACAAGATCA  Raphanus sativus cv Rat-Tail Radish #3870
FD939496       --> CGATGAAGCTAGGAGAGTTGTGAAGAAACCGA-GGTATAATACAAGATCA  Raphanus sativus var. oleiformis
EX771114       --> CGATGAAGCTAGGAGAGTTGTGAAGAAACCGA-GGTATAATACAAGATCA  Raphanus raphanistrum subsp. landra
FD569014       --> CGATGAAGCTAGGAGAGTTGTGAAGAAACCAA-GGTATAATACAAGATCA  Raphanus sativus cv Early Scarlet Globe
EV527784       --> CGATGAAGCTAGGAGAGTTGTGAAGAAACCGA-GGTATAATACAAGATCA  Raphanus raphanistrum subsp. maritimus
EX764215       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY915167       --> CGATGAAGCTAGGAGAGTTGTGAAGAAACCGA-GGTATAATACAAGATCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY922062       --> ..................................................  Raphanus raphanistrum subsp. landra
FD570287       --> CGATGAAGCTAGGAGAGTTGTGAAGAAACCAA-AGTATAATACAAGATCA  Raphanus sativus cv Early Scarlet Globe
FD965849       --> CGATGAAGCTAGGA....................................  Raphanus raphanistrum subsp. maritimus
EX763882       --> CGATGAAGCTAGGAGAGTTGTGAAGAAACCAA-GGTATAATACAAGATCA  Raphanus raphanistrum subsp. raphanistrum (NY)

               644    -    694
UN13618        --> AGCAAGCGTGCGGGTGTCATTACTTATGTCTCTTAGATAA--TGCAATTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD573294       <-- AGCAAGCGTGCGGGTGTCATTACTTATGTCTCTTAGATAA--TGCAATTA
EY918099       <-- AGCAAGCGTGCGGGTGTCATTACTTATGTCTCTTAGATAA--TGCAATTA
EX768180       <-- AGCAAGCGTGCGGGTGTCATTACTTATGTCTCTTAGATAA--TGCAATTA
EX775240       <-- AGCAAGCGTGCGGGTGTCATTACTTATGTCTCTTAGATAA--TGCAATTA
EX767910       <-- AGCAAGCGTGCGGGTGTCATTACTTATGTCTCTTAGATAA--TGCAATTA
FD547761       <-- AGCAAGCGTGCGGGTGTCATTACTTATGTCTCTTAGATAA--TGCAATTA
FD574324       <-- AGCAAGCGTGCGGGTGTCATTACTTATGTCTCTTAGATAA--TGCAATTA
EY943215       <-- AGCAAGCGTGCGGGTGTCATTAATTATGTCTCTTAGATAAAATGCAATTA
FD584172       <-- AGCAAGCGTGCGGGTGTCATTAATTATGTCTTTTAGATAAAATGCAATTA
FD567652       <-- AGCAAGCGTGCGGGCGTCATTACTTATGTTTCTTAGATAA--TGCAATTA
FD961474       <-- AGCAAGCGTGCGGGTGTCATTACTTATGTCTCTTAGATAA--TGCAATTA
EY911068       <-- AGCAAGCGTGCGGGTGTCATTACTTATGTCTCTTAGATAA--TGCAATTA
FD538581       <-- AGCAAGCGTGCGGGTGTCATTACTTATGTTTTTTAGATAA--TGCAATTA
EY947286       --> AGCAAGCGTGCGGGTGTCATTAATTATGTCTCTTAGATAA-ATGCAATTA
FD542534       --> AGCAAGCGTGCGGGTGTCATTACTTATGTCTCTTAGATAA--TGCAATTA
FD564085       --> AGCAAGCGTGCGGGCGTCATTACTTATGTCTCTTAGATAA--TGCAATTA
FD580366       --> AGCAAGCGTGCGGGTGTCATTAATTATGTCTCTTAGATAA-ATGCAATTA
FD939496       --> ..................................................
EX771114       --> AGCAAGCGTGCGGGTGTCATTACTTATGTCTCTTA...............
FD569014       --> AGCAAGCGTGCGGGTGTCATTACTTATGTCTCTTAGATAA--TGCAATTA
EV527784       --> AGCAAGCGTGCGGGTGTCATTACTTATGTCTCTTAGATAA--TGCAATTA
EX764215       --> ..................................................
EY915167       --> AGCAAGCGTGCGGGTGTCATTACTTATGTCTCTTAGATAA--TGCAATTA
EY922062       --> ..................................................
FD570287       --> AGCAAGCGTGCGGGTGTCATTACTTATGTCTCTTAGATAA--TGCAATTA
FD965849       --> ..................................................
EX763882       --> AGCAAGCGTGCGGGTGTCATTACTTATGTCTCTTAGATAA--TGCAATTA

               694    -    744
UN13618        --> CCATTGTCCGAGATATTCTCCTGTTTGAGGGGAATTTTATCTCTTTATCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD573294       <-- CCATTGTCCGAGATATTCTCCTGTTTGAGGGGAATTTTATCTCTTTATCA  Raphanus sativus cv Early Scarlet Globe
EY918099       <-- CCATTGTCCGAGATATTCTCCTGTTTGAGGGGAATTTTATCTCTGTATCA  Raphanus raphanistrum subsp. landra
EX768180       <-- CCATTGTCCGAGATATTCTCCTGTTTGAGGGGAATTTTATCTCTGTATCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX775240       <-- CCATTGTCCGAGATATTCTCCTGTTTGAGGGGAATTTTATCTCTGTATCA  Raphanus raphanistrum subsp. landra
EX767910       <-- CCATTGTCCGAGATATTCTCCTGTTTGAGGGGAATTTTATCTCTTTATCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD547761       <-- CCATTGTCCGAGATATTCTCCTGTTTGAGGGGAATTTTATCTCTGTATCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD574324       <-- CCATTGTCCGAGATATTCTCCTGTTTGAGGGGAATTTTATCTCTTTATCA  Raphanus sativus cv Early Scarlet Globe
EY943215       <-- CCATTGTCCGAGATATTCTCCTGTTTGAGGGGAATTTTATCTCTTTATCA  Raphanus sativus cv Rat-Tail Radish #3870
FD584172       <-- CCATTGTCCGAGATATTCTCCTGTTTGAGGGGAATTTTATCTCTTTATCA  Raphanus sativus cv Rat-Tail Radish #3870
FD567652       <-- CCATTGTCCGAGATATTCTCCTGTTTGAGGGGAATTTTATCTCTTTATCA  Raphanus sativus var. oleiformis
FD961474       <-- CCATTGTCCGAGATATTCTCCTGTTTGAGGGGAATTTTATCTCTGTATCA  Raphanus raphanistrum subsp. maritimus
EY911068       <-- CCATTGTCCGAGATATTCTCCTGTTTGAGGGGAATTTTATCTCTGTATCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD538581       <-- CCATTGTCCGAGATATTTTCCTGTTTGAGGGGAATTTTACCTCTTTATCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY947286       --> CCATTGTCCGAGATATTCTCCTGTTTGAGGGGAATTTTATCTCTTTATCA  Raphanus sativus cv Rat-Tail Radish #3870
FD542534       --> CCATTGTCCGAGATATTCTCCTGTT.........................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD564085       --> CCATTGTCCGAGATATTCTCCTGTTTGAGGGa..................  Raphanus sativus var. oleiformis
FD580366       --> CCATTGTCCGAGATATTCTCCTGTTTGAGGG-AATTTTATCT........  Raphanus sativus cv Rat-Tail Radish #3870
FD939496       --> ..................................................  Raphanus sativus var. oleiformis
EX771114       --> ..................................................  Raphanus raphanistrum subsp. landra
FD569014       --> CCATTGTCCGAGATATTCTCCTGTTTGAGGGGAATTT-ATCTCTTTATCA  Raphanus sativus cv Early Scarlet Globe
EV527784       --> CCATTGTCCGAGATATTCTCCTGTTTGAGGGGAATTTTATCTCTGTATCA  Raphanus raphanistrum subsp. maritimus
EX764215       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY915167       --> CCATTGTCCGAGATATTCTCCTGTTTGAGGG-AATTTTATCTCTGTATCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY922062       --> ..................................................  Raphanus raphanistrum subsp. landra
FD570287       --> CCATTGTCCGAGATATTCTCCTGTTTGAGGG-AATTT-ATCTCTTTATCA  Raphanus sativus cv Early Scarlet Globe
FD965849       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX763882       --> CCATTGTCCGAGATATTCTCCTGTTTGAGGGGAATTTTATCTCTTTATCA  Raphanus raphanistrum subsp. raphanistrum (NY)

               744    -    794
UN13618        --> TTATGTTTATGTATGACTTTTGTGGGACAACAACTACT-AAAATATTAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD573294       <-- TTATGTTTATGTATGACTTTTGTGGGACAACAACTACT-AAAATCTTA..  Raphanus sativus cv Early Scarlet Globe
EY918099       <-- TTATGTCTATGTATGACTTTTGTGGGACAACAACTACT-AAAATATTAAA  Raphanus raphanistrum subsp. landra
EX768180       <-- TTATGTTTATGTATGACTTTTGTGGGACAACAACTACT-AAAATATTAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX775240       <-- TTATGTTTATGTATGACTTTTGTGGGACAACAACTACT-AAAATATTAAA  Raphanus raphanistrum subsp. landra
EX767910       <-- TTATGTTTATGTATGACTTTTGTGGGACAACAACTACT-AAAATCTTAct  Raphanus raphanistrum subsp. raphanistrum (NY)
FD547761       <-- TTATGTTTATGTATGACTTTTGTGGGACAACAACTACT-AAAATATTAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD574324       <-- TTATGTTTATGTATGACTTTTGTGGGACAACAACTACT-AAAATCTTAct  Raphanus sativus cv Early Scarlet Globe
EY943215       <-- TTATGTTTATGTATGACTTTTGGGGGACAACAACTACTTAAAATATTAAA  Raphanus sativus cv Rat-Tail Radish #3870
FD584172       <-- TTATGTTTATGTATGACTTTTGTGGGACAACAACTACTTAAAATATTAAA  Raphanus sativus cv Rat-Tail Radish #3870
FD567652       <-- TTATGTTTATGTATGACTTTTGTGGGACAACAACTACT-AAAATCTTAct  Raphanus sativus var. oleiformis
FD961474       <-- TTATGTTTATGTATGACTTTTGTGGGACAACAACTACT-AAAATATTAAA  Raphanus raphanistrum subsp. maritimus
EY911068       <-- TTATGTTTATGTATGACTTTTGTGGGACAACAACTACT-AAAATATTAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD538581       <-- TTATGTTTATGTATGACTTTTGTGGGACAACAACTACT-AAAATATTAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY947286       --> TTATGTTTATGTATGACTTTTGggg.........................  Raphanus sativus cv Rat-Tail Radish #3870
FD542534       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD564085       --> ..................................................  Raphanus sativus var. oleiformis
FD580366       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD939496       --> ..................................................  Raphanus sativus var. oleiformis
EX771114       --> ..................................................  Raphanus raphanistrum subsp. landra
FD569014       --> TTATGTTTATGTATGACTTTTGTGGG........................  Raphanus sativus cv Early Scarlet Globe
EV527784       --> TTATGTTTATGTATGACTTTTGTGGGACAACAACTACT-AAA-TATTAAA  Raphanus raphanistrum subsp. maritimus
EX764215       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY915167       --> TTATGTTTATGTATGACT................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY922062       --> ..................................................  Raphanus raphanistrum subsp. landra
FD570287       --> TTATGTTTATGTATGACTTT-GTGGGACAcact.................  Raphanus sativus cv Early Scarlet Globe
FD965849       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX763882       --> TTATGTTTATGTATGACTTTTGTGGGACAACAACTACT-AAAATCTTAct  Raphanus raphanistrum subsp. raphanistrum (NY)

               794    -    844
UN13618        --> ACTTTTATCCATTTGTTTTCT
                   ~~~~~~~~~~~~~~~~~~~~~
FD573294       <-- .....................
EY918099       <-- ACTTTTATCC...........
EX768180       <-- ACTTTTATCC...........
EX775240       <-- ACTTTTATCCAg.........
EX767910       <-- ccctc................
FD547761       <-- ACTTTTATCCATTTGT.....
FD574324       <-- ccctc................
EY943215       <-- ACTTTTATCCATTTGTTTTCT
FD584172       <-- ACTTTTATCCATT........
FD567652       <-- ccctcagccatcagtacc...
FD961474       <-- ACTTTTATCC...........
EY911068       <-- ACTTTTATCCAc.........
FD538581       <-- ACTTTT...............
EY947286       --> .....................
FD542534       --> .....................
FD564085       --> .....................
FD580366       --> .....................
FD939496       --> .....................
EX771114       --> .....................
FD569014       --> .....................
EV527784       --> ACT..................
EX764215       --> .....................
EY915167       --> .....................
EY922062       --> .....................
FD570287       --> .....................
FD965849       --> .....................
EX763882       --> ccctc................