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Alignment for radish unigene UN13619

               1      -     51
UN13619        --> AAACTCTAAAAGCGGAAAGTTCCATAACATAAAAATGAAACACAGAGTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW714872       <-- AAACTCTAAAAGCGGAAAGTTCCATAACATAAAAATGAAACACAGAGTAC
FD942008       <-- AAACTCTAAAAGCGGAAAGTTCCATAACATAAAAATGAAACACAGAGTAC
EY897194       <-- ........AAAGCGGAAAGTTCCATAACATAAAAACGAAACACAGAGTAG
EY938919       <-- ...........GCGGAAAGTTCCATAACATAAAAATGAAACACAGAGTAC
FD569209       <-- ..................................................
FD986508       <-- ..................................................
FD571850       <-- ..................................................
EV528132       <-- ..................................................
EW723844       <-- ..................................................
FD987290       <-- ..................................................
EW719082       --> AAACTCTAAAAGCGGAAAGTTCCATAACATAAAAATGAAACACAGAGTAC
FD573456       --> .....CTAAGAGCGGAAAGTTCCATAACATAAAAATGAAACACAGAGTAC
EV532203       --> .....gTAAAAGCGGAAAGTTCCATAACATAAAAACGAAACACAGAGTAG
EW729003       --> ..................................................
EY934612       --> ..................................................

               51     -    101
UN13619        --> CAACAGTTTACATGATGATGATGACCC-GATACCAGTTCAAGGTCTTATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW714872       <-- CAACAGTTTACATGATGATGATGACCCCGATACCAGTTCAAGGTCTTATT
FD942008       <-- CAACAGTTTACATGATGATGATGACCC-GATACCAGTTCAAGGTCTTATT
EY897194       <-- CAACAGTTTACATGATGATGATGACCC-GATACCAGTTCAAGGTCTTATT
EY938919       <-- CAACAGTTTACATGATGATGATGACCC-GATACCAGTTCAAGGTCTTATT
FD569209       <-- ..................................................
FD986508       <-- ..................................................
FD571850       <-- ..................................................
EV528132       <-- ..................................................
EW723844       <-- ..................................................
FD987290       <-- ..................................................
EW719082       --> CAACAGTTTACATGATGATGATGACCC-GATACCAGTTCAAGGTCTTATT
FD573456       --> CAACAGTTTACATGATGATGATGACCC-GATACCAGTTCAAGGTCTTATT
EV532203       --> CAACAGTTTACATGATGATGATGACCC-GATACCAGTTCAAGGTCTTATT
EW729003       --> ............................GATACCAGTTCAAGGTCTTATT
EY934612       --> .....................................TCAAGGTCTTATT

               101    -    151
UN13619        --> ATAA-CCAGAAACAAA-GTCAGACACAGACTCAGCTGTATCTAAAGAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW714872       <-- ATAA-CCAGAAACAAA-GTCAGACACAGACTCAGCTGTATCTAAAGAGAA
FD942008       <-- ATAA-CCAGAAACAAA-GTCAGACACAGACTCAGCTGTATCTAAAGAGAA
EY897194       <-- ATAAACCAGAAACAAA-GTCAGACACAGACTCAGCTGTATCTAAAGAGAA
EY938919       <-- ATAA-CCAGAAACAAA-GTCAGACACAGACTCAGCTGTATCTAAAGAGAA
FD569209       <-- ........GAAACAAA-GTCAGACACAGACTCAGCTGTATCTAAAGAGA-
FD986508       <-- ..................................................
FD571850       <-- ..................................................
EV528132       <-- ..................................................
EW723844       <-- ..................................................
FD987290       <-- ..................................................
EW719082       --> ATAA-CCAGAAACAAA-GTCAGACACAGACTCAGCTGTATCTAAAGAGAA
FD573456       --> ATAA-CCAGAAACAAA-GTCAGACACAGACTCAGCTGTATCTAAAGAGAA
EV532203       --> ATAAACCAGAAACAAA-GTCAGACACAGACTCAGCTGTATCTAAAGAGAA
EW729003       --> ATAAACCAGAAACAAAAGTCAGACACAGACTCAGCTGTATCTAAAGAGAA
EY934612       --> ATAA-CCAGAAACAAA-GTCAGACACAGACTCAGCTGTATCTAAAGAGAA

               151    -    201
UN13619        --> TCAAGCAAACACAACAGCAACATCCAAAGATAAATGCCTTAGCTTTTT--
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW714872       <-- TCAAGCAAACACAACAGCAACATCCAAAGATAAATGCCTTAGCTTTTT--
FD942008       <-- TCAAGCAAACACAACAGCAACATCCAAAGATAAATGCCTTAGCTTTTT--
EY897194       <-- TCAAACAAACACAACAGCAACATCCAAAGATAAATGCCTTAGCTTTTTTT
EY938919       <-- TCAAGCAAACACAACAGCAACATCCAAAGATAAATGCCTTAGCTTTTT--
FD569209       <-- TCAAGCAAACACAACAGCAACATCCAAAGATAAATGC-TTAGCTTTTT--
FD986508       <-- ..................................................
FD571850       <-- ..................................................
EV528132       <-- ..................................................
EW723844       <-- ..................................................
FD987290       <-- ..................................................
EW719082       --> TCAAGCAAACACAACAGCAACATCCAAAGATAAATGCCTTAGCTTTTT--
FD573456       --> TCAAGCAAACACAACAGCAACATCCAAAGATAAATGCCTTAGCTTTTT--
EV532203       --> TCAAACAAACACAACAGCAACATCCAAAGATAAATGCCTTAGCTTTTTTT
EW729003       --> TCAAACAAACACAACAGCAACATCGAAAGATAAATGCATTAGCTTTTTTT
EY934612       --> TCAAGCAAACACAACAGCAACATCCAAAGATAAATGCCTTAGCTTTTT--

               201    -    251
UN13619        --> ATTTAGTAAGATAAAGCTAAGCAGAACAAGACTATCC-GTCATGGGAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW714872       <-- ATTTAGTAAGATAAAGCTAAGCAGAACAAGACTATCC-GTCATGGGAGAG  Raphanus sativus var. oleiformis
FD942008       <-- ATTTAGTAAGATAAAGCTAAGCAGAACAAGACTATCC-GTCATGGGAGAG  Raphanus sativus var. oleiformis
EY897194       <-- ATTTAGTAAGATAAAGCTAAGCAGAACAAGACTCTCC-ATCATGGGAGAG  Raphanus raphanistrum subsp. maritimus
EY938919       <-- ATTTAGTAAGATAAAGCTAAGCAGAACAAGACTATCC-GTCATGGGAGAG  Raphanus sativus cv Early Scarlet Globe
FD569209       <-- ATTTAGTAAGATAAAGCTAAGCAGAACAAGACTATCC-GTCATGGGAGAG  Raphanus sativus cv Early Scarlet Globe
FD986508       <-- .......AAGATAAAGCTAAGCAGAACAAGACTCTCC-ATCATGGGAGAG  Raphanus raphanistrum subsp. landra
FD571850       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV528132       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EW723844       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD987290       <-- ..................................................  Raphanus raphanistrum subsp. landra
EW719082       --> ATTTAGTAAGATAAAGCTAAGCAGAACAAGACTATCC-GTCATGGGAGAG  Raphanus sativus var. oleiformis
FD573456       --> ATTTAGTAAGATAAAGCTAAGCAGAACAAGACTATCC-GTCATGGGAGAG  Raphanus sativus cv Early Scarlet Globe
EV532203       --> ATTTAGTAAGATAAAGCTAAGCAGAACAAGACTCTCC-ATCATGGGAGAG  Raphanus raphanistrum subsp. maritimus
EW729003       --> ATTTAGTAAGATAAAGCTAAGCAGAACAAGACTCTCCCGGTATGGGAGAG  Raphanus sativus cv Early Scarlet Globe
EY934612       --> ATTTAGTAAGATAAAGCTAAGCAGAACAAGACTATCC-GTCATGGGAGAG  Raphanus sativus cv Early Scarlet Globe

               251    -    301
UN13619        --> TGTTTT-AGTCATCGTCTTCATCACGACGCCTCTGGTGGTGGTGATGCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW714872       <-- TGTTTT-AGTCATCGTCTTCATCACGACGCCTCTGGTGGTGGTGATGCTG
FD942008       <-- TGTTTT-AGTCATCGTCTTCATCACGACGCCTCTGGTGGTGGTGATGCTG
EY897194       <-- TGTTTT-AGTCATAGTCTTCATCACGACGCCTCTGGTGGTGGTGATGCTT
EY938919       <-- TGTTTT-AGTCATCGTCTTCATCACGACGCCTCTGGTGGTGGTGATGCTG
FD569209       <-- TGTTTT-AGTCATCGTCTTCATCA---CGCCTCTGGTGGTGGTGATGCTG
FD986508       <-- TGTTTT-AGTCATCGTCTTCATCACGACGCCTCTGGTGGTGGTGATGCTT
FD571850       <-- .tTTTT-AGTCATCGTCTTCATCACGACGCCTCTGGTGGTGGTGATGCTG
EV528132       <-- ..................................................
EW723844       <-- ..................................................
FD987290       <-- ..................................................
EW719082       --> TGTTTT-AGTCATCGTCTTCATCACGACGCCTCTGGTGGTGGTGATGCTG
FD573456       --> TGTTTT-AGTCATCGTCTTCATCACG---CCTCTGGTGGTGGTGATGCTG
EV532203       --> TGTTTT-AGTCATCGTCTTCATCACGACGCCTCTGGTGGTGGTGATGCTT
EW729003       --> TGTTTTTAGTCATCGTCTTCATCACGACGCCTCTGGTGGTGGTGATGCTG
EY934612       --> TGTTTT-AGTCATCGTCTTCATCACGACGCCTCTGGTGGTGGTGATGCTG

               301    -    351
UN13619        --> GTAACGATGCTGTTTCTTCTCCTCATCATCATCATCAGAGTTATTGCCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW714872       <-- GTAACGATGCTGTTTCTTCTCCTCATCATCATCATCAGAGTTATTGCCAC
FD942008       <-- GTAACGATGCTGTTTCTTCTCCTCATCATCACCATCAGAGTTATTGCCAC
EY897194       <-- GTAACGATGCTGTTTCTTCTCCTCATCATCATCATCAGAGTTATTGCCAC
EY938919       <-- GTAACGATGCTGTTTCTTCTCCTCATCATCATCATCAGAGTTATTGCCAC
FD569209       <-- GTAACGATGCTGTTTCTTCTCCTCATCATCATCATCAGAGTTATTGCCAC
FD986508       <-- GTAACGATGCTGTTTCTTCTCCTCATCATCATCATCAGAGTTATTGCCAC
FD571850       <-- GTAACGATGCTGTTTCTTCTCCTCATCATCAT---CAGAGTTATTGCCAC
EV528132       <-- ..................................................
EW723844       <-- ..................................................
FD987290       <-- ..................................................
EW719082       --> GTAACGATGCTGTTTCTTCTCCTCATCATCATCATCAGAGTTATTGCCAC
FD573456       --> GTAACGATGCTGTTTCTTCTCCTCATCATCATCATCAGAGTTATTGCCAC
EV532203       --> GTAACGATGCTGTTTCTTCTCCTCATCATCATCATCAGAGTTATTGCCAC
EW729003       --> GTAACGATGCTGTTTCTTCTCCTCATCATCATCATCAGAGTTATTGCCAC
EY934612       --> GTAACGATGCTGTTTCTTCTCCTCATCATCATCATCAGAGTTATTGCCAC

               351    -    401
UN13619        --> CATATTTCTTGCGGCCATAGCTCCCTTCCTCATCATCACCAGAACGGTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW714872       <-- CATATTTCTTGCGGCCATAGCTCCCTTCCTCATCATCACCAGAACGGTTC
FD942008       <-- CATATTTCTTGCGGCCATAGCTCCCTTCCTCA..................
EY897194       <-- CATATTTCTTGCGGCCATAGCTCCCTTCCTCATCATCACCAGAACGGTTC
EY938919       <-- CATATTTCTTGCGGCCATAGCTCCCTTCCTCATCATCACCAGAACGGTTC
FD569209       <-- CATATTTCTTGCGGCCATAGCTCCCTTCCTCATCATCACTAGAACGGTTC
FD986508       <-- CATATTTCTTGCGGCCATAGCTCCCTTCCTCATCATCACCAGAACGGTTC
FD571850       <-- CATATTTCTTGCGGCCATAGCTCCCTTCCTCATCATCACCAGAACGGTTC
EV528132       <-- ..................................................
EW723844       <-- ..................................................
FD987290       <-- ..................................................
EW719082       --> CATATTTCTTGCGGCCATAGCTCCCTTCCTCATCATCACCAGAACGGTTC
FD573456       --> CATATTTCTTGCGGCCATAGCTCCCTTCCTCATCATCACTAGAACGGTTC
EV532203       --> CATATTTCTTGCGGCCATAGCTCCCTTCCTCATCATCACCAGAACGGTTC
EW729003       --> CATATTTCTTGCGGCCATAGCTCCCTTCCTCATCATCACCAGAACGGTTC
EY934612       --> CATATTTCTTGCGGCCATAGCTCCCTTCCTCATCATCACCAGAACGGTTC

               401    -    451
UN13619        --> CTGCGCCCCTCATCATCATCATCATCATCATTGCGACGGCCATAGCTAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW714872       <-- CTGCGCCCCTCATCATCATCATCATCATCATTGCGACGGCCATAGCTAGG
FD942008       <-- ..................................................
EY897194       <-- CTGCGCCCCTCATCATCc................................
EY938919       <-- CTGCGCCCCTCATCATCATCATCATCATCATTGCGACGGCCATAGCTAGG
FD569209       <-- CTGCGCCCCTCATCATCATCATCATCATCATTGCGACGGCCATAGCTAGG
FD986508       <-- CTGCGCCCCTCATCATCATCATCATCATCATTGCGACGGCCATAGCTAGG
FD571850       <-- CTGCGCCCCTCATCATCATCATCATCATCATTGCGACGGCCATAGCTAGG
EV528132       <-- ....................................CGGCCATGGCTAGG
EW723844       <-- ..................................................
FD987290       <-- ..................................................
EW719082       --> CTGCGCCCCTCATCATCATCATCATCATCATTGCGACGGCCATAGCTAGG
FD573456       --> CTGCGCCCCTCATCATCATCATCATCATCATTGCGACGGCCATAGCTAGG
EV532203       --> CTGCGCCCCTCATCATCATCATCATCATCATTGCGACGGCCATGGCTAGG
EW729003       --> CTGCGCCCCTCATCATCATCATCATCATCATCGCGACGGCCATAGCTAGG
EY934612       --> CTGCGCCCCTCATCATCATCATCATCAT---TGCGACGGCCATAGCTAGG

               451    -    501
UN13619        --> CTTCCTGTAACTCCCTTCCTCTTGTTCCTCAGATCTTCCATAGCTAGGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW714872       <-- CTTCCTGTAACTCCCTTCCTCTTGTTCCTCAGATCTTCC-TAGCTAGGCT  Raphanus sativus var. oleiformis
FD942008       <-- ..................................................  Raphanus sativus var. oleiformis
EY897194       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY938919       <-- CTTCCTGTAACTCCCTTCCTCTTGTTCCTCAGATCTTCCATAGCTAGGCT  Raphanus sativus cv Early Scarlet Globe
FD569209       <-- CTTCCTGTAACTCCCTTCCTCTTGTTCCTCAGATCTTCCATAGCTAGGCT  Raphanus sativus cv Early Scarlet Globe
FD986508       <-- CTTCCTGTAACTCCCTTCCTCCTGTTCCTCCAATCTTCCATAGCTAGGCT  Raphanus raphanistrum subsp. landra
FD571850       <-- CTTCCTGTAACTCCCTTCCTCCTGTTCCTCAGATCTTCCATAACTAGGCT  Raphanus sativus cv Early Scarlet Globe
EV528132       <-- CTTCCTGTAACTCCCTTCCTCCTGTTCCTCAGATCTTCCATAGCTAGGCT  Raphanus raphanistrum subsp. maritimus
EW723844       <-- ...................................TTCCATAGCTAGGCT  Raphanus sativus cv Early Scarlet Globe
FD987290       <-- ..................................................  Raphanus raphanistrum subsp. landra
EW719082       --> CTTCCTGTAACTCCCTTCCTCTTGTTCCTCAGATCTTCC-TAGCTAGGCT  Raphanus sativus var. oleiformis
FD573456       --> CTTCCTGTAACTCCCTTCCTCTTGTTCCTCAAATCTTCCATAGCTAGGCT  Raphanus sativus cv Early Scarlet Globe
EV532203       --> CTTCCTGTAACTCCCTTCCTCCTGTTCCTCAGATCTTCCATAGCTAGGCT  Raphanus raphanistrum subsp. maritimus
EW729003       --> CTTCCTGTAACTCCCTTCCTCCTGTTCCTCAGATCTTCCATAGCTAGGCT  Raphanus sativus cv Early Scarlet Globe
EY934612       --> CTTCCTGTAACTCCCTTCCTCT-GTTCCTCAGATCTTCCATAGCTAGGCT  Raphanus sativus cv Early Scarlet Globe

               501    -    551
UN13619        --> TCCTATAGCCTCCCTCTTCCTCTTCCTCAGATCTTCCGTAGCTGCTGGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW714872       <-- TCCTATAGCCTCCCTCTTCCTCTTCCTCAGATCTTCCGTAGCTGCTGGGC
FD942008       <-- ..................................................
EY897194       <-- ..................................................
EY938919       <-- TCCTATAGCCTCCCTCTTtccc............................
FD569209       <-- TCCTATAGCCTCCCTCTTCCTCTTCCTCAGATCTTCCGTAGCTGCTGGGC
FD986508       <-- TCCTATAGCCTCCCTCTTCCTCTTCCTCAGATCTTCCGTAGCTGCTGGGC
FD571850       <-- TCCTATAGCCTCCCTCTTCCTCTTCCTCAGATCTCCCAAAGCTGCTGGGC
EV528132       <-- TCCTATAGCCTCCCTCTTCCTCTTCCTCAGATCTTCCGTAGCTGCTGGGC
EW723844       <-- TCCTATAGCCTCCCTCTTCCTCTTCCTCAGATCTCCCATAGCTGCTGGGC
FD987290       <-- ..................................................
EW719082       --> TCCTATAGCCTCCCTCTTCCTCTTCCTCAGATCTTCCGTAGCTGCTGGGC
FD573456       --> TCCTATAGCCTCCCTCTTCCTCTTCCTCAAATCTTCCGTAGCTGCTGGGC
EV532203       --> TCCTATAGCCTCCCTCTTCCTCTTCCTCAGATCTTCCGTAGCTGCTGGGC
EW729003       --> TCCTATAGCCTCCCTCTTCCTCTTCCTCAGATCTCCCATAGCTGCTGGGC
EY934612       --> TCCTATAGCCTC......................................

               551    -    601
UN13619        --> TTTATGTAGCTCTCAACCTGATCCTCAGATCTCCCATAGCTAGGCTTCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW714872       <-- TTTATGTAGCTCTCAACCTGATCCTCAGATCTCCCATAGCTAGGCTTCCT
FD942008       <-- ..................................................
EY897194       <-- ..................................................
EY938919       <-- ..................................................
FD569209       <-- TTTATGTAGCTCTCAACCTGATCCTCAGATCTCCCATAGCTAGGCTTCCT
FD986508       <-- TTTATGTAGCTCTCAACCTGATCCTCAGATCTCCCATAGCTAGGCTTCCT
FD571850       <-- TTTATGTAGCTCTCAACCTGATCCTCAGATCTCCCATAGCTAGGCTTCCT
EV528132       <-- TTTATGTAGCTCTCAACCTGATCCTCAGATCTCCCATAGCTAGGCTTCCT
EW723844       <-- TTTATGTAGCTCTCAACCTGATCCTCAGACCTCCCATAGCTAGGCTTCCT
FD987290       <-- ..................................................
EW719082       --> TTTATGTAGCTCTCAACCTGATCCTCAGATCTCCCATAGCTAGGCTTCCT
FD573456       --> TTTATGTAGCTCTCAACCTGATCCTC........................
EV532203       --> TTTATGTAGCTCTCAACCTGATCCTCAGATCTCCCATAGCTAGGCTTCCT
EW729003       --> TTTATGTAGCTCTCAACCTGATCCTCAGACCTCCCATAGCTAGGCTTCCT
EY934612       --> ..................................................

               601    -    651
UN13619        --> GTAACCTCCTCCTTCTTCCTCCTCAGACCTCCCATAGCTAGGCTTACGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW714872       <-- GTAACCTCCTCCTTCTTCCTCCTCAGACCTCCCGTAGCTAGGCTTACGCT
FD942008       <-- ..................................................
EY897194       <-- ..................................................
EY938919       <-- ..................................................
FD569209       <-- GTAACCTCCTCCTTCTTCCTCCTCAGACCTCCCATAGCTAGGCTTACGCT
FD986508       <-- GTAACCTCCTCCATCTTCCTCCTCAGACCTCCCATAGCTAGGCTTACGCT
FD571850       <-- GTAACCTCCTCCTTCTTCCTCCTCAGACCTCCCATAGCTAGGCTTACGCT
EV528132       <-- GTAACCTCCTCCATCTTCCTCCTCAGACCTCCCATAGCTAGGCTTACGCT
EW723844       <-- GTAACCTCCTCCTTCTTCCTCCTCAGACCTCCCATAGCTAGGCTTACGCT
FD987290       <-- ..................................................
EW719082       --> GTAACCTCCTCCTTCTTCCTCCTCAGACCTCCCGTAGCTAGGCTTACGCT
FD573456       --> ..................................................
EV532203       --> GTAACCTCCTCCATCTTCCTCCTCAGACCTCCCATAGCTAGGCTTACGCT
EW729003       --> GTAACCTCCTCCTTCTTCCTCCTCAGACCTCCCATAGCTAGGCTTACGCT
EY934612       --> ..................................................

               651    -    701
UN13619        --> CATACTCGGTCTCCGTCTCCGATCTCCCACCATATCCGGATTCAGGCCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW714872       <-- CATACTCGG.........................................
FD942008       <-- ..................................................
EY897194       <-- ..................................................
EY938919       <-- ..................................................
FD569209       <-- CATACTCGGTCTCCGTCTCCGATCTCCCACCATATCCGGATTCAGGCCTC
FD986508       <-- CATACTCTGTCTCCGTCTCCGATCTCCCACCATATCCGGATTCAGGCCTC
FD571850       <-- CATACTCGGTCTCCGTCTCCGATCTCCCACCATATCCGGATTCAGGCCTC
EV528132       <-- Cc................................................
EW723844       <-- CATACTCGGTCTCCGTCTCCGATCTCCCACCATATCCGGATTCAGGCCTC
FD987290       <-- ...........TCCGTCTCCGATCTCCCACCATATCCGGATTCAGGCCTC
EW719082       --> CATACTCGG.........................................
FD573456       --> ..................................................
EV532203       --> Cc................................................
EW729003       --> CATACTCGGTCTCCGTCTCCGATCTCCCACCATATCCGGATTCAGGCCTC
EY934612       --> ..................................................

               701    -    751
UN13619        --> CTGCCATACTCAACCTCCGTTCTTCCACCGTAACCACCAGACTCAGACTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW714872       <-- ..................................................
FD942008       <-- ..................................................
EY897194       <-- ..................................................
EY938919       <-- ..................................................
FD569209       <-- CTGCCATACTCAACCTCCGTTCTTCCACCGTAACCACCAGACTCAGACTC
FD986508       <-- CTGCCATACTCAACCTCCGTTCTTCCACCGTAACCACCAGACTCAGACTC
FD571850       <-- CTGCCATACTCAACCTCCGTTCTTCCACCGTAACCACCAGACTCAGACTC
EV528132       <-- ..................................................
EW723844       <-- CTGCCATACTCAACCTCCGTTCTTCCACCGTAACCACCAGACTCAGACTC
FD987290       <-- CTGCCATACTCAACCTCCGTTCTTCCACCGTAACCACCAGACTCAGACTC
EW719082       --> ..................................................
FD573456       --> ..................................................
EV532203       --> ..................................................
EW729003       --> CTGCCATACTCAACCTCCGTTCTTCCACCGTAACCACCAGACTCAGACTC
EY934612       --> ..................................................

               751    -    801
UN13619        --> CGATCTGCCACCGTAACCGCCAGATTCGACCTCCGATCTCCCACCGTATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW714872       <-- ..................................................
FD942008       <-- ..................................................
EY897194       <-- ..................................................
EY938919       <-- ..................................................
FD569209       <-- CGATCTGCCACCATAGCCGCCAGACTCAACCTCCGATCTCCCACCATATC
FD986508       <-- CGATCTGCCACCGTAACCGCCAGATTCGACCTCCGATCTCCCACCGTATC
FD571850       <-- CGATCTGCCACCGTAACCGCCGGATTCGACCTCCGATCTCCCACCGTATC
EV528132       <-- ..................................................
EW723844       <-- CGATCTGCCACCGTAACCGCCAGATTCGACCTCCGATCTCCCACCGTATC
FD987290       <-- CGATCTGCCACCGT....................................
EW719082       --> ..................................................
FD573456       --> ..................................................
EV532203       --> ..................................................
EW729003       --> CGATCTGCCACCGTAACCGCCAGATTCGACCTCCGATCTCCCACCGTATC
EY934612       --> ..................................................

               801    -    851
UN13619        --> CAGATTCAGGTCTCCGGCCATACTCAACCTCCGTTCTTCCACCGTAACCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW714872       <-- ..................................................
FD942008       <-- ..................................................
EY897194       <-- ..................................................
EY938919       <-- ..................................................
FD569209       <-- CAGATTCAGGCCTCCGGCCATACTCAACCTCCGTTCTTCCACCGTAACCG
FD986508       <-- CAGATTCAGGCCTCCGGCCATACTCAACCTCCGTTCTTCCACCGTAACCA
FD571850       <-- CAGATTCAGGTCTCCGGCCATACTCAACCTCCGTTCTTCCACCGTAACCA
EV528132       <-- ..................................................
EW723844       <-- CAGATTCAGGTCTCCGGCCATACTCAACCTCCGTTCTTCCACCGTAACCA
FD987290       <-- ..................................................
EW719082       --> ..................................................
FD573456       --> ..................................................
EV532203       --> ..................................................
EW729003       --> CAGATTCAGGTCTCCGGCCATACTCAACCTCCGTTCTTCCACCGTAACCA
EY934612       --> ..................................................

               851    -    901
UN13619        --> CCAGATTCAACCTCCGATCTACCTCCATATCCACCAGATCCGTAACTCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW714872       <-- ..................................................
FD942008       <-- ..................................................
EY897194       <-- ..................................................
EY938919       <-- ..................................................
FD569209       <-- CCAGATTCAACCTCCGATCTACCTCCATATCCACCAGATCCGTAACTCTG
FD986508       <-- CCAGATTCAACCTCCGATCTACCTCCATAGCCACCAGATCCGTAACTCTG
FD571850       <-- CCAGATTCAACCTCCGATCTACCTCCATATCCACCAGATCCGTAACTCTG
EV528132       <-- ..................................................
EW723844       <-- CCAGATTCAACCTCC...................................
FD987290       <-- ..................................................
EW719082       --> ..................................................
FD573456       --> ..................................................
EV532203       --> ..................................................
EW729003       --> CCAGATTCAACCTCCGATCTACCTCCATATCCACCAGATCCc........
EY934612       --> ..................................................

               901    -    951
UN13619        --> CTCAGGTCTCCGTCCATACTCCGTCTCCGTCGCTCCGCCGTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW714872       <-- ...........................................
FD942008       <-- ...........................................
EY897194       <-- ...........................................
EY938919       <-- ...........................................
FD569209       <-- CTCAGGTCTCCGgccc...........................
FD986508       <-- CTCAGGTCTacggccc...........................
FD571850       <-- CTCAGGTCTCCGTCCATACTCCGTCTCCGTCGCTCCGCCGTAC
EV528132       <-- ...........................................
EW723844       <-- ...........................................
FD987290       <-- ...........................................
EW719082       --> ...........................................
FD573456       --> ...........................................
EV532203       --> ...........................................
EW729003       --> ...........................................
EY934612       --> ...........................................