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Alignment for radish unigene UN13630

               1      -     51
UN13630        --> GGATTTTCTGACTCCTCCGATACAGAAGATCTCGTTT--GAAAAAAGAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY435065       <-- ..................................................
EX777278       <-- ..................................................
FD582596       <-- ..................................................
EV532335       <-- ..................................................
FD977637       <-- ..................................................
EY926496       <-- ..................................................
FD981978       --> GGATTTTCTAACTCCTCCGATACAGAAGATCTCGTTT--GAAAAAAGAAA
EY930255       --> .ggaTTTCTGACTCCTCCGATACAGAAGATCTCGTTTAAGAAAAAAAAAA
EV528301       --> ..................................................
EW714547       --> ..................................................
EX773490       --> ..................................................
FD535398       --> ..................................................
EV524680       --> ..................................................
FD548285       --> ..................................................

               51     -    101
UN13630        --> AAGATTTAATCTCAAATCTCCGAAACTCAGCTCGTGTTGATCGTCGCCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY435065       <-- ..................................................
EX777278       <-- ..................................................
FD582596       <-- ..................................................
EV532335       <-- ..................................................
FD977637       <-- ..................................................
EY926496       <-- ..................................................
FD981978       --> AAGATTAAATCTCAAATCTCCGAAACTCAGATCGTGTTGATCGTCGCCTA
EY930255       --> AAAGTTTAATCTCAAATCTCCGAAACTCAGCTCGTGTTGATCGTCGCCTA
EV528301       --> .....ggAATCTCAAATCTCCGAAACTCAGCTCGTGTTGATCGTCCCCTA
EW714547       --> ..................................................
EX773490       --> ..................................................
FD535398       --> ..................................................
EV524680       --> ..................................................
FD548285       --> ..................................................

               101    -    151
UN13630        --> CAAAGGAAAGCCAAAATCGATCTAGGAGTCGAAGATGCCGGTTGCAGCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY435065       <-- ..................................................
EX777278       <-- ..................................................
FD582596       <-- ..................................................
EV532335       <-- ..................................................
FD977637       <-- ..................................................
EY926496       <-- ..................................................
FD981978       --> CAACGTGAAGCCAA-TTCGATCTAGGAATCGAAGATGCCGGTTGCAGCTT
EY930255       --> CAAAGGAAAGCCAAAATCGATCTAGGAGTCGAAGATGCCGGTTGCAGCTT
EV528301       --> CAAAGGAAAGCCAAAATCGATCTAGGAGTCGAAGATGCCGGTTGCAGCTT
EW714547       --> ..................................................
EX773490       --> ..................................................
FD535398       --> ..................................................
EV524680       --> ..................................................
FD548285       --> ..................................................

               151    -    201
UN13630        --> CCGCCATCTACTTTCTCAATCTCCGCGGCGATGTACTCATCAACCGCACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY435065       <-- ..................................................
EX777278       <-- ..................................................
FD582596       <-- ..................................................
EV532335       <-- ..................................................
FD977637       <-- ..................................................
EY926496       <-- ..................................................
FD981978       --> CCGCCATCTACTTTCTCAATCTCCGCGGCGATGTACTCATCAACCGCACC
EY930255       --> CCGCCATCTACTTTCTCAATCTCCGCGGCGATGTACTCATCAACCGCACC
EV528301       --> CCGCCATCTACTTTCTCAACCTCCGCGGCGATGTACTCATCAACCGCACC
EW714547       --> ..................................................
EX773490       --> ..................................................
FD535398       --> ..................................................
EV524680       --> ..................................................
FD548285       --> ..................................................

               201    -    251
UN13630        --> TACCGAGACGACGTCGGGGGAAACATGGTGGACGCGTTTCGAACGCATAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY435065       <-- ..................................................
EX777278       <-- ..................................................
FD582596       <-- ..................................................
EV532335       <-- ..................................................
FD977637       <-- ..................................................
EY926496       <-- ..................................................
FD981978       --> TACCGAGACGACGTCGGGGGAAACATGGTGGACGCGTTTCGAACGCATAT
EY930255       --> TACCGAGACGACGTCGGGGGAAACATGGTGGACGCGTTTCGAACGCATAT
EV528301       --> TACCGAGACGACGTCGGGGGAAACATGGTGGACGCGTTTCGAACGCATAT
EW714547       --> ..................................................
EX773490       --> ..................................................
FD535398       --> ..................................................
EV524680       --> ..................................................
FD548285       --> ..................................................

               251    -    301
UN13630        --> AATGCAAACGAAGGAGCTAGGGAACTGTCCAGTGCGTCAGATCGGTGGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY435065       <-- ..................................................
EX777278       <-- ..................................................
FD582596       <-- ..................................................
EV532335       <-- ..................................................
FD977637       <-- ..................................................
EY926496       <-- ..................................................
FD981978       --> AATGCAAACGAAGGAGCTAGGGAACTGTCCAGTGCGTCAGATCGGTGGAT
EY930255       --> AATGCAAGCGAAGGAGCTAGGGAACTGTCCGGTGCGTCAGATCGGTGGAT
EV528301       --> AATGCAAACGAAGGAGCTAGGGAACTGTCCAGTGCGTCAGGTCGGTGGAT
EW714547       --> ..................................................
EX773490       --> ..................................................
FD535398       --> ..................................................
EV524680       --> ..................................................
FD548285       --> ..................................................

               301    -    351
UN13630        --> GCTCCTTCGTCTATATGAGGATCAGCAATGTCTACATCGTCATCGTTGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY435065       <-- ..................................................
EX777278       <-- ..................................................
FD582596       <-- ..................................................
EV532335       <-- ..................................................
FD977637       <-- ..................................................
EY926496       <-- ..................................................
FD981978       --> GCTCCTTCGTCTATATGAGGATCAGCAATGTCTACATCGTCATCGTTGTT
EY930255       --> GCTCCTTCGTCTATATGAGGATCAGCAATGTCTACATCGTCATTGTTGTT
EV528301       --> GCTCCTTCGTCTATATGAGGATCAGCAATGTCTACATCGTCATCGTTGTT
EW714547       --> ..................................................
EX773490       --> ..................................................
FD535398       --> ..................................................
EV524680       --> ..................................................
FD548285       --> ..................................................

               351    -    401
UN13630        --> AGTAGCAATGCTAATGTTGCTTGTGGCTTCAAATTCGTTGTTGAGGCTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY435065       <-- ..................................................
EX777278       <-- ..................................................
FD582596       <-- ..................................................
EV532335       <-- ..................................................
FD977637       <-- ..................................................
EY926496       <-- ..................................................
FD981978       --> AGTAGCAATGCTAATGTTGCTTGTGGCTTCAAATTCGTTGTTGAGGCTGT
EY930255       --> AGCAGCAATGCTAATGTTGCTTGTGGCTTCAAGTTCGTTGTTGAGGCTGT
EV528301       --> AGTAGCAATGCTAATGTTGCTTGTGGCTTCAAATTCGTTGTTGAGGCTGT
EW714547       --> ..................................................
EX773490       --> ..................................................
FD535398       --> ..................................................
EV524680       --> ..................................................
FD548285       --> ..................................................

               401    -    451
UN13630        --> TGCTTTGTTTAAATCTTACTTTGGTGGAGCTTTTGATGAAGACGCTATTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY435065       <-- ..................................................
EX777278       <-- ..................................................
FD582596       <-- ..................................................
EV532335       <-- ..................................................
FD977637       <-- ..................................................
EY926496       <-- ..................................................
FD981978       --> TGCTTTGTTTAAATCTTACTTTGGTGGAGCTTTTGATGAAGACGCTATTA
EY930255       --> TGCTTTGTTTAAATCTTACTTTGGTGGAGCTTTTGATGAAGACGCTATTA
EV528301       --> TGCTTTGTTTAAATCTTACTTTGGTGGAGCTTTTGATGAAGACGCTATTA
EW714547       --> ..................................................
EX773490       --> ..................................................
FD535398       --> ..................................................
EV524680       --> ..................................................
FD548285       --> ..................................................

               451    -    501
UN13630        --> AGAATAACTTTGTCCTCATCTATGAATTGTTGGACGAGATTATGGACTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY435065       <-- ..................................................
EX777278       <-- ..................................................
FD582596       <-- ..................................................
EV532335       <-- ..................................................
FD977637       <-- ..................................................
EY926496       <-- ..................................................
FD981978       --> AGAATAACTTTGTCCTCATCTATGAATTGTTGGACGAGATTATGGACTTT
EY930255       --> AGAATAACTTTGTCCTCATCTATGAATTGTTGGACGAGATTATGGACTTT
EV528301       --> AGAATAACTTTGTCCTCATCTATGAATTGTTGGACGAGATTATGGACTTT
EW714547       --> ..................................................
EX773490       --> ..................................................
FD535398       --> ..................................................
EV524680       --> ..................................................
FD548285       --> ..................................................

               501    -    551
UN13630        --> GGGTATCCACAGAATCTCTCCCCTGAAATTTTGAAACTTTATATTACTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY435065       <-- ..................................................
EX777278       <-- ..................................................
FD582596       <-- ..................................................
EV532335       <-- ..................................................
FD977637       <-- ..................................................
EY926496       <-- ..................................................
FD981978       --> GGGTATCCACAGAATCTCTCCCCTGAAATTTTGAAACTTTATATTACTCA
EY930255       --> GGGTATCCACAGAATCTCTCCCCTGAAATTTTGAAACTTTATATTA....
EV528301       --> GGGTATCCACAGAATCTCTCCCCTGAAATTTTGAAACTTTATATTACTCA
EW714547       --> ..................................................
EX773490       --> ..................................................
FD535398       --> ..................................................
EV524680       --> ..................................................
FD548285       --> ..................................................

               551    -    601
UN13630        --> GGAGGGTGTGCGGTCACCGTTTTCATCAAAGCCGAAGGACAACAAGCCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY435065       <-- ..................................................
EX777278       <-- ..................................................
FD582596       <-- ..................................................
EV532335       <-- ..................................................
FD977637       <-- ..................................................
EY926496       <-- ..................................................
FD981978       --> GGAGGGTGTGCGGTCACCGTTTTCATCAAAGCCGAAGGACAACAAGCCTG
EY930255       --> ..................................................
EV528301       --> GGAGGGTGTGCGGTCACCGTTTTCATCAAAGCCGAAGGACAACAAGCCTG
EW714547       --> ..................................................
EX773490       --> ..................................................
FD535398       --> ..................................................
EV524680       --> ..................................................
FD548285       --> ..................................................

               601    -    651
UN13630        --> TTCCAAATGCAACGCTGCAAGTTACAGGTGCTGTTGGTTGGCGAAGAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY435065       <-- ..................................................
EX777278       <-- ..................................................
FD582596       <-- ..................................................
EV532335       <-- ..................................................
FD977637       <-- ..................................................
EY926496       <-- ..................................................
FD981978       --> TTCCAAATGCAACGCTGCAAGTTACAGGTGCTGTTGGTTGGCGAAGAGAG
EY930255       --> ..................................................
EV528301       --> TTCCAAATGCAACGCTGCAAGTTACAGGTGCTGTTGGTTGGCGAAGAGAG
EW714547       --> ...............................................GAG
EX773490       --> ..................................................
FD535398       --> ..................................................
EV524680       --> ..................................................
FD548285       --> ..................................................

               651    -    701
UN13630        --> GGTCTTTCTTATAAGAAGAATGAGGTGTTTCTGGATATTGTGGAAAGTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY435065       <-- ..................................................
EX777278       <-- ..................................................
FD582596       <-- ..................................................
EV532335       <-- ..................................................
FD977637       <-- ..................................................
EY926496       <-- ..................................................
FD981978       --> GGTCTTTCTTATAAGAAGAATGAGGTGTTTCTGGATATTGTGGAAAGTGT
EY930255       --> ..................................................
EV528301       --> GGTCTTTCTTATAAGAAGAATGAGGTGTTTCTGGATATTGTGGAAAGTGT
EW714547       --> GGTCTTTCTTATAAGAAGAATGAGGTGTTTCTGGATATTGTGGAAAGTGT
EX773490       --> ....................TGAGGTGTTTCTGGATATTGTGGAAAGTGT
FD535398       --> ..................................................
EV524680       --> ..................................................
FD548285       --> ..................................................

               701    -    751
UN13630        --> AAACCTT-CTTATGTCCTCTAAAGGCAATGTTCTTCGGTGTGATGTGACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY435065       <-- ..................................................
EX777278       <-- ..................................................
FD582596       <-- ..................................................
EV532335       <-- ..................................................
FD977637       <-- ..................................................
EY926496       <-- ..................................................
FD981978       --> AAACCTT-CTTATGTCCTCTAAAGGCAATGTTCTTCGGTGTGATGTG...
EY930255       --> ..................................................
EV528301       --> AAACCTT-CTTATGTCCTCTAAAGGCAATGTTCTTCGGTGTGATGTGACG
EW714547       --> AAACCTT-CTTATGTCCCCCAAAGGCAATGTTCTTCGGTGTGATGTGACG
EX773490       --> AAACCTTTCTTATGTCCTCTAAAGGCAATGTTCTTCGGTGTGATGTGACG
FD535398       --> ..................................................
EV524680       --> ..................................................
FD548285       --> ..................................................

               751    -    801
UN13630        --> GGAAAAGTTTTAATGAAATGTTTCCTTTCGGGGATGCCTGATTTGAAGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY435065       <-- .........................................TTTGAAGTT
EX777278       <-- ..................................................
FD582596       <-- ..................................................
EV532335       <-- ..................................................
FD977637       <-- ..................................................
EY926496       <-- ..................................................
FD981978       --> ..................................................
EY930255       --> ..................................................
EV528301       --> GGAAAAGTTTTAATGAAATGTTTCCTTTCGGGGATGCCTGATTTGAAGTT
EW714547       --> GGGAAAGTTTTAATGAAATGTTTCCTTTCGGGAATGCCTGATTTGAAGTT
EX773490       --> GGAAAAGTTTTAATGAAATGTTTCCTTTCGGGGATGCCTGATTTGAAGTT
FD535398       --> ..................................................
EV524680       --> ..................................................
FD548285       --> ..................................................

               801    -    851
UN13630        --> GGGG-TTGAATGATAAAATTGGTCTTGAGAAAGAATCTGAAATGAAATCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY435065       <-- GGGG-TTGAATGATAAAATTGGTCTTGAGAAAGAATCTGAAATGAAATCT
EX777278       <-- ...............................................TCT
FD582596       <-- ..................................................
EV532335       <-- ..................................................
FD977637       <-- ..................................................
EY926496       <-- ..................................................
FD981978       --> ..................................................
EY930255       --> ..................................................
EV528301       --> GGGG-TTGAATGATAAA-TTGGTCTTGAGAA-GAATCTGAAATGAAATCT
EW714547       --> GGGG-TTGAATGATAAAATTGGTCTTGAGAAAGAATCTGAAATGAAATCT
EX773490       --> GGGGGTTGAATGATAAAATTGGTCTTGAGAAAGAATCTGAAATGAAATCT
FD535398       --> ..................................................
EV524680       --> ..................................................
FD548285       --> ..................................................

               851    -    901
UN13630        --> CGCCCAGCTAAGAGTGGTAAAACTATTGAGCTGGATGATGTCACTTTTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY435065       <-- CGCCCAGCTAAGAGTGGTAAAACTATTGAGCTGGATGATGTCACTTTTCA
EX777278       <-- CGCCCAGCTAAGAGTGGTAAA-CTATTGAGCTGGATGATGTCACTTT-CA
FD582596       <-- ....................................GATGTCACTTTTCA
EV532335       <-- ................................................CA
FD977637       <-- ..................................................
EY926496       <-- ..................................................
FD981978       --> ..................................................
EY930255       --> ..................................................
EV528301       --> ..................................................
EW714547       --> CGCCCAGCTAAGAGTGGTAAAACTATTGAGCTGGATGATGTCACTTTTCA
EX773490       --> CGCCCAGCTA........................................
FD535398       --> ..................................................
EV524680       --> ..................................................
FD548285       --> ..................................................

               901    -    951
UN13630        --> CCAGTGTGTGAACCTGACAAGATTTAACTCCGAGAAGACTGTTAGCTTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY435065       <-- CCAGTGTGTGAACCTGACAAGATTTAACTCCGAGAAGACCGTTAGCTTTG
EX777278       <-- CCAGTGTGTGAAC-TGACAAGATTTAACTCCGAGAAGACTGTTAGCTTTG
FD582596       <-- CCAGTGTGTGAAC-TGACAAGATTTAACTCCGAGAAGACCGTTAGCTTTG
EV532335       <-- CCAGTGTGTGAACCTGACAAGATTTAACTCCGAGAAGACTGTTAGCTTTG
FD977637       <-- ..................................................
EY926496       <-- ..................................................
FD981978       --> ..................................................
EY930255       --> ..................................................
EV528301       --> ..................................................
EW714547       --> CCAGTGTGTGAACCTGACAAGATTTAACTCCGAGAAGACCGTTAGCTTTG
EX773490       --> ..................................................
FD535398       --> ..........................gCTCCGAGAAGACTGTTAGCTTTG
EV524680       --> ..................................................
FD548285       --> ..................................................

               951    -   1001
UN13630        --> TACCACCGGATGGTGAATTTGAACTGATGAAGTACCGAATAACAGAGGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY435065       <-- TACCACCGGATGGTGAATTTGAACTGATGAAGTACCGAATAACAGAGGGC
EX777278       <-- TACCACCGGATGGTGAATTTGAACTGATGAAGTACCGAATAACAGAGGGC
FD582596       <-- TACCACCGGATGGTGAATTTGAACTGATGAAGTACCGAATAACAGAGGGC
EV532335       <-- TACCACCGGATGGTGAATTTGAACTGATGAAGTACCGAATAACAGAGGGC
FD977637       <-- ...........................................AGAGGGC
EY926496       <-- ..................................................
FD981978       --> ..................................................
EY930255       --> ..................................................
EV528301       --> ..................................................
EW714547       --> TACCACCGGATGGTGAATTTGAACTGATGAAGTACCGAATAACAGAGGGC
EX773490       --> ..................................................
FD535398       --> TACCACCGGATGGTGAATTTGAACTGATGAAGTACCGAATAACAGAGGGC
EV524680       --> ..................................................
FD548285       --> ..................................................

               1001   -   1051
UN13630        --> GTGAATCTGCCTTTCCGTGTATTGCCAACAATTAAAGAACTTGGTCGCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY435065       <-- GTGAATCTGCCTTTCCGTGTATTGCCAACAATTAAAGAACTTGGTCGCAC
EX777278       <-- GTGAATCTGCCTTTCCGTGTATTGCCAACAATTAAAGAACTTGGTCGCAC
FD582596       <-- GTGAATCTGCCTTTCCGTGTATTGCCAACAATTAAAGAACTTGGTCGCAC
EV532335       <-- GTGAATCTGCCTTTCCGTGTATTGCCAACAATTAAAGAACTTGGTCGCAC
FD977637       <-- GTGAATCTGCCTTTCCGTGTATTGCCAACAATTAAAGAACTTGGTCGCAC
EY926496       <-- ................GTGTATTGCCAACAATTAAAGAACTTGGTCGCAC
FD981978       --> ..................................................
EY930255       --> ..................................................
EV528301       --> ..................................................
EW714547       --> GTGAATCTGCCTTTCCGTGTATTGCCAACAATTAAAGAACTTGGTCGCAC
EX773490       --> ..................................................
FD535398       --> GTGAATCTGCCTTTCCGTGTATTGCCAACAATTAAAGAACTTGGTCGCAC
EV524680       --> .............gCCGTGTATTGCCAACAATTAAAGAACTTGGTCGCAC
FD548285       --> ..................................................

               1051   -   1101
UN13630        --> ACGCATGGAAGTAAATGTGAAGGTCAAAAGTGTGTTTGGTGCTAAAATGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY435065       <-- ACGAATGGAAGTAAATGTGAAGGTCAAAAGTGTGTTTGGTGCTAAAATGT  Raphanus sativus cv GSK3-1
EX777278       <-- ACGCATGGAAGTAAATGTGAAGGTCAAAAGTGTGTTTGGTGCTAAAATGT  Raphanus raphanistrum subsp. landra
FD582596       <-- ACGAATGGAAGTAAATGTGAAGGTCAAAAGTGTGTTTGGTGCTAAAATGT  Raphanus sativus cv Rat-Tail Radish #3870
EV532335       <-- ACGCATGGAAGTAAATGTGAAGGTCAAAAGTGTGTTTGGTGCTAAAATGT  Raphanus raphanistrum subsp. maritimus
FD977637       <-- ACGCATGGAAGTAAATGTGAAGGTCAAAAGTGTGTTTGGTGCTAAAATGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY926496       <-- ACGAATGAAAGTAAATGTGAAGGTCAAAAGTGTGTTTGGTGCTAAAATGT  Raphanus sativus var. oleiformis
FD981978       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY930255       --> ..................................................  Raphanus sativus var. oleiformis
EV528301       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EW714547       --> ACGAATGGAAGTAAATGTGAAGGTCAAAAGTGTGTTTGGTGCTAAAATGT  Raphanus sativus var. oleiformis
EX773490       --> ..................................................  Raphanus raphanistrum subsp. landra
FD535398       --> ACGCATGGAAGTAAGTGTGAAGGTCAAAAGTGTGTTTGGTGCTAAAATGT  Raphanus raphanistrum subsp. maritimus
EV524680       --> ACGCATGGAAGTAAATGTGAAGGTCAAAAGTGTGTTTGGTGCTAAAATGT  Raphanus raphanistrum subsp. maritimus
FD548285       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               1101   -   1151
UN13630        --> TTGCGCTTGGAGTCGTGGTTAAAATTCCAGTGCCGAAACAAACAGCAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY435065       <-- TTGCGCTTGGAGTCGTGGTTAAAATTCCAGTGCCAAAACAAACAGCAAAG
EX777278       <-- TTGCGCTTGGAGTCGTGGTTAAAATTCCAGTGCCAAAACAAACAGCAAAG
FD582596       <-- TTGCGCTTGGAGTCGTGGTTAAAATTCCAGTGCCAAAACAAACAGCAAAG
EV532335       <-- TTGCGCTTGGAGTCGTGGGAAAAATTCCAGTGCCGAAACAAACAGCAAAG
FD977637       <-- TTGCGCTTGGAGTCGTGGTTAAAATTCCAGTGCCGAAACAAACAGCAAAG
EY926496       <-- TTGCGCTTGGAGTCGTGGTTAAAATTCCAGTGCCGAAACAAACAGCAAAG
FD981978       --> ..................................................
EY930255       --> ..................................................
EV528301       --> ..................................................
EW714547       --> TTGCGCTTGGAGTCGTGGTTAAAATTCCAGTGCCGAAACAAACAGCAAAG
EX773490       --> ..................................................
FD535398       --> TTGCGCTTGGAGTCGTGGTTAAAATTCCAGTGCCGAAACAAACAGCAAAG
EV524680       --> TTGCGCTTGGAGTCGTGGTTAAAATTCCAGTGCCGAAACAAACAGCAAAG
FD548285       --> ..................................................

               1151   -   1201
UN13630        --> ACGAACTTCCAAGTGACAACTGGTCGTGCTAAGTACAACCCATCAATCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY435065       <-- ACGAACTTCCAAGTGACAACTGGTCGTGCTAAGTACAACCCATCAATCGA
EX777278       <-- ACGAACTTCCAAGTGACAACTGGTCGTGCTAAGTACAACCCATCAATCGA
FD582596       <-- ACGAACTTCCAAGTGACAACTGGTCGTGCTAAGTACAACCCATCAATCGA
EV532335       <-- ACGAACTTCCAAGTGACAACTGGTCGTGCTAAGTACAACCCATCAATCGA
FD977637       <-- ACGAACTTCCAAGTGACAACTGGTCGTGCTAAGTACAACCCATCAATCGA
EY926496       <-- ACTAACTTCCAAGTGACAACTGGTCGTGCTAAGTACAACCTATCAATCGA
FD981978       --> ..................................................
EY930255       --> ..................................................
EV528301       --> ..................................................
EW714547       --> ACTAACTTCCAAGTGACAACTGGTCGTGCTAAGTACAACCCATCAATCGA
EX773490       --> ..................................................
FD535398       --> ACGAACTTCCAAGTGACAACTGGTCGTGCTAAGTACAACCCATCAATCGA
EV524680       --> ACGAACTTCCAAGTGACAACTGGTCGTGCTAAGTACAACCCATCAATCGA
FD548285       --> ..................................................

               1201   -   1251
UN13630        --> TTGCTTGGTTTGGAAGATAAGAAAATTTCCCGGACAAACAGAGTCCACAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY435065       <-- TTGCTTAGTTTGGAAGATAAGAAAATTTCCCGGACAAACAGAGTCCACAC  Raphanus sativus cv GSK3-1
EX777278       <-- TTGCTTAGTTTGGAAGATAAGAAAATTTCCCGGACAAACAGAGTCCACAC  Raphanus raphanistrum subsp. landra
FD582596       <-- TTGCTTAGTTTGGAAGATAAGAAAATTTCCCGGACAAACAGAGTCCACAC  Raphanus sativus cv Rat-Tail Radish #3870
EV532335       <-- TTGCTTGGTTTGGAAGATAAGAAAATTTCCCGGACAAACAGAGTCTACAC  Raphanus raphanistrum subsp. maritimus
FD977637       <-- TTGCTTGGTTTGGAAGATAAGAAAATTTCCCGGACAAACAGAGTCTACAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY926496       <-- TTGCTTGGTTTGGAAGATAAGAAAATTTCCCGGACAAACAGAGTCCACAC  Raphanus sativus var. oleiformis
FD981978       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY930255       --> ..................................................  Raphanus sativus var. oleiformis
EV528301       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EW714547       --> TTGCTTGGTTTGGAAGATAAGAAAATTTCCCGGACAAACAGAGTCCACAC  Raphanus sativus var. oleiformis
EX773490       --> ..................................................  Raphanus raphanistrum subsp. landra
FD535398       --> TTGCTTGGTTTGGAAGATAAGAAAATTTCCCGGACAAACAGAGTCTACAC  Raphanus raphanistrum subsp. maritimus
EV524680       --> TTGCTTGGTTTGGAAGATAAGAAAATTTCCCGGACAAACAGAGTCTACAC  Raphanus raphanistrum subsp. maritimus
FD548285       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               1251   -   1301
UN13630        --> TAAGTGCAGAGATTGAGTTGATCTCAACAATGGGAGAAAAGAAATCTTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY435065       <-- TAAGCGCAGAGATTGAGTTGATCTCAACAATGGGAGAAAAGAAATCTTGG
EX777278       <-- TAAGTGCAGAGATTGAGTTGATCTCAACAATGGGAGAAAAGAAATCTTGG
FD582596       <-- TAAGCGCAGAGATTGAGTTGATTTCAACAATGGGAGAAAAGAAATCTTGG
EV532335       <-- TAAGTGCAGAGATTGAGTTGATCTCAACAATGGGAGAAAAGAAATCTTGG
FD977637       <-- TAAGTGCAGAGATTGAGTTGATCTCAACAATGGGAGAAAAGAAATCTTGG
EY926496       <-- TAAGTGCAGAGATTGAGTTGATCTCAACAATGGGAGAAAAGAAATCTTGG
FD981978       --> ..................................................
EY930255       --> ..................................................
EV528301       --> ..................................................
EW714547       --> TAAGTGCAGAGATTGAGTTGATCTCAACAATGGGAGAAAA-AAATCTTGG
EX773490       --> ..................................................
FD535398       --> TAAGTGCAGAGATTGAGTTGATCTCAACAATGGGAGAAAAGAAATCTTGG
EV524680       --> TAAGTGCAGAGATTGAGTTGATCTCAACAATGGGAGAAAAGAAATCTTGG
FD548285       --> ............gTGAGTTGATCTCGACAATGGGAGAAAAGAAATCTTGG

               1301   -   1351
UN13630        --> ACAAGGCCACCAATCCAAATGGAATTTCAAGTGCCAATGTTCACAGCCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY435065       <-- ACAAGGCCACCAATCCAAATGGAATTTCAAGTGCCAATGTTCACAGCCTC
EX777278       <-- ACAAGGCCACCAATCCAAATGGAATTTCAAGTGCCAATGTTCACGGCCTC
FD582596       <-- ACAAGGCCACCAATCCAAATGGAATTTCAAGTGCCAATGTTCACAGCCTC
EV532335       <-- ACAAGGCCACCAATCCAAATGGAATTTCAAGTGCCAATGTTCACAGCCTC
FD977637       <-- ACAAGGCCACCAATCCAAATGGAATTTCAAGTGCCAATGTTCACAGCCTC
EY926496       <-- ACAAGGCCACCAATCCAAATGGAATTTCAAGTGCCAATGTTCACAGCCTC
FD981978       --> ..................................................
EY930255       --> ..................................................
EV528301       --> ..................................................
EW714547       --> ACAAAGCCACCAATCCAAATGGAATTTCAAGTGCCAATGTTCACAGCCTC
EX773490       --> ..................................................
FD535398       --> ACAAGGCCACCAATCCAAATAGAATTTCAAGTGCCAATGTTCACAGCCTC
EV524680       --> ACAAGGCCACCAATCCAAATGGAATTTCAAGTGCCAATGTTCACAGCCTC
FD548285       --> ACAAGGCCACCAATCCAAATGGAATTTCAAGTGCCAATGTTCACAGCCTC

               1351   -   1401
UN13630        --> TGGTTTGCGAGTTCGTTTCCTCAAGGTGTGGGAGAAGAGCGGTTACAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY435065       <-- TGGTTTGCGAGTTCGTTTCCTCAAGGTGTGGGAGAAGAGCGGTTACAACA
EX777278       <-- TGGTTTGCGAGTTCGTTTCCTCAAGGTGTGGGAGAAGAGCGGTTACAACA
FD582596       <-- TGGTTTGCGAGTTTGTTTCCTCAAGGTGTGGGAGAAGAGCGGTTACAACA
EV532335       <-- TGGTTTGCGAGTTCGTTTCCTCAAGGTGTGGGAGAAGAGCGGTTACAACA
FD977637       <-- TGGTTTGCGAGTTCGTTTCCTCAAGGTGTGGGAGAAGAGCGGTTACAACA
EY926496       <-- TGGTTTGCGAGTTCGTTTCCTCAAGGTGTGGGAGAAGAGCGGTTACAACA
FD981978       --> ..................................................
EY930255       --> ..................................................
EV528301       --> ..................................................
EW714547       --> TGGTTTGCGAGTTCGTTTCCTCAAGtg.......................
EX773490       --> ..................................................
FD535398       --> TGGTTTGCGAGTTCGTTTCCTCAAGGTGTGGGAGAAGAGCGGTTACAACA
EV524680       --> TGGTTTGCGAGTTCGTTTCCTCAAGGTGTGGGAGAAGAGCGGTTACAACA
FD548285       --> TGGTTTGCGAGTTCGTTTCCTCAAGGTGTGGGAGAAGAGCGGTTACAACA

               1401   -   1451
UN13630        --> CGGTGGAGTGGGTTCGCTACATAACAAAAGCTGGATCTTATGAGATCAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY435065       <-- CGGTGGAGTGGGTTCGATACATAACAAAAGCTGGATCTTATGAGATCAGA
EX777278       <-- CGGTGGAGTGGGTTCGATACATAACAAAAGCTGGATCTTATGAGATCAGA
FD582596       <-- CGGTGGAGTGGGTTCGATACATAACAAAAGCTGGATCTTATGAGATCAGA
EV532335       <-- CGGTGGAGTGGGTTCGCTACATAACAAAAGCTGGATCTTATGAGATCAGA
FD977637       <-- CGGTGGAGTGGGTTCGCTACATAACAAAAGCTGGATCTTATGAGATCAGA
EY926496       <-- CGGTGGAGTGGGTTCGATACATAACAAAAGCTGGATCTTATGAGATCAGA
FD981978       --> ..................................................
EY930255       --> ..................................................
EV528301       --> ..................................................
EW714547       --> ..................................................
EX773490       --> ..................................................
FD535398       --> CGGTGGAGTGGGTTCGCTACATAACAAAAGCTGGATCTTATGAGATCAGA
EV524680       --> CGGTGGAGTGGGTTCGCTACATAACAAAAGCTGGATCTTATGAGATCAGA
FD548285       --> CGGTGGAGTGGGTTCGCTACATAACAAAAGCTGGATCTTATGAGATCAGA

               1451   -   1501
UN13630        --> TGCTGAAGTTAAAGATCACACTTCAGGTTAAGTCACATCAAACTCCGAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY435065       <-- TGCTGAAGTTAAAGATCACACTTCAGGTTAAGTCACATCAAACTCCGAGG
EX777278       <-- TGCTGAAGTTAAAGATCACACTTCAGGTTAAGTCACATCAAACTCCGAGG
FD582596       <-- TGCTGAAGTTAAAGATCACACTTCAGGTTAAGTCACATCAAACTCCGAGG
EV532335       <-- TGCTGAAGTTAAAGATCACACTTCAGGTTAAGTCACATCAAACTCCGAGG
FD977637       <-- TGCTGAAGTTAAAGATCGCACTTCAGGTTAAGTCACATCAAACTCCGAGG
EY926496       <-- TGCTGAAGTTAAAGATCACACTTCAGGTTAAGTCACATCAAACTCCGAGG
FD981978       --> ..................................................
EY930255       --> ..................................................
EV528301       --> ..................................................
EW714547       --> ..................................................
EX773490       --> ..................................................
FD535398       --> TGCTGAAGTTAAAGATCACACTTCAGGCTAAGTCACATCAAACTCCGAGG
EV524680       --> TGCTGAAGTTAAAGATCACACTTCAGGTTAAGTCACATCAAACTCCGAGG
FD548285       --> TGCTGAAGTTAAAGATCACACTTCAGGTTAAGTCACATCAAACTCCGAGG

               1501   -   1551
UN13630        --> CTCATGGCTTCTAGCTTTTGTTCCTTGTTCAAACAAGAGTTAAATATCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY435065       <-- CTCATGGCTTCTAGCTTTTGTTCCTTGTTCAAACAAGAGTTAAATATCAT
EX777278       <-- CTCATGGCTTCTAGCTTTTGTTCCTTGTTCAAACAAGAGTTAAATATCAT
FD582596       <-- CTCATGGCTTCTAGCTTTTGTTCCTTGTTCAAACAAGAGTTAAATATCAT
EV532335       <-- CTCATGGCTTCTAGCTTTTGTTCCTTGTTCAAACAAGAGTTAAATATCAT
FD977637       <-- CTCATGGCTTCTAGCTTTTGTTCCTTGTTCAAACAAGAGTTAAATATCAT
EY926496       <-- CTCATGGCTTCTAGCTTTTGTTCCTTGTTCAAACAAGAGTTAAATATCAT
FD981978       --> ..................................................
EY930255       --> ..................................................
EV528301       --> ..................................................
EW714547       --> ..................................................
EX773490       --> ..................................................
FD535398       --> CTCATGGCTTCTAGCTTTTGTTCCTTGTTCAAACAAGAGTTAAATATCAT
EV524680       --> TTCATGGCTTCTAGCTTTTGTTCCTTGTTCAAACAAGAGTTAAATATCAT
FD548285       --> CTCATGGCTTCTAGCTTTTGTTCCTTGTTCAAACAAGAGTTAAATATCAT

               1551   -   1601
UN13630        --> TGAATTGGTTTTCTCTTCTCTTTTGTGGTTTTCTACGAGTTATAGTTTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY435065       <-- TGAATTGGTTTTCTCTTCTCTTTTGTGGTTTTCTACGAATTATAGTTTAA
EX777278       <-- TGAATTGGTTTTCTCTTCTCTTTTGTGGTTTTCTACGAGTTATAGTTTAA
FD582596       <-- TGAATTGGTTTTCTCTTCTCTTTTGTGGTTTTCTACGAATTATAGTTTAA
EV532335       <-- TGAATTGGTTTTCTCTTCTCTTTTGTGGTTTTCTACGAGTTATAGTTTAA
FD977637       <-- TGAATTGGTTTTCTCTTCTCTTTTGTGGTTTTCTACGAGTTATAGTTTAA
EY926496       <-- TGAATTGGTTTTCTCTTCTCTTTTGTGGTTTTCTACGAATTATATTTTAA
FD981978       --> ..................................................
EY930255       --> ..................................................
EV528301       --> ..................................................
EW714547       --> ..................................................
EX773490       --> ..................................................
FD535398       --> TGAATTGGTTTTTTCTTCTCTTTTGTGGTTTTCTACGAGTTATAGTTTAA
EV524680       --> TGAATTGGTTTTCTCTTCTCTTTTGTGGTTTTCTACGAGTTATAGTTTAA
FD548285       --> TGAATTGGTTTTCTCTTCTCTTTTGTGGTTTTCTACGAGTTATAGTTTAA

               1601   -   1651
UN13630        --> ATTAATTTGTAGTTTGCGTCATCGTATTTGTGAAAGAAATATTAATCGGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY435065       <-- ATTAATTTGTAGTTTGCGTCATCGTATTTGTGAAAGAAATATTAATCGGG
EX777278       <-- ATTAATTTGTAGTTTGCGTCATCGTATTTGTGAAAGAAATATTAATCGGG
FD582596       <-- ATTAATTTGTAGTTTGCGTCATCGTATTTGTGAAAGAAATATTAATCGGG
EV532335       <-- ATTAATTTGTAGTTTGCGTCATCGTATTTGTGAAAGAAATATTAATCGGG
FD977637       <-- ATTAATTTGTAGTTTGCGTCATCGTATTTGTGAAAGAAATATTAATCGGG
EY926496       <-- ATTAATTTGTAGTTTGCGTCATCGTATTTGTGAAAGAAATATTAATCGGG
FD981978       --> ..................................................
EY930255       --> ..................................................
EV528301       --> ..................................................
EW714547       --> ..................................................
EX773490       --> ..................................................
FD535398       --> ATTAATTTGTAGTTTGCGTCATCGTATTTGTGAAAGAAATATTAATCGGG
EV524680       --> ATTAATTTGTAGTTTGCGTCATCGTATTTGTGAAAGAAATATTAATCGGG
FD548285       --> ATTAATTTGTAGTTTGCGTCATCGTATTTGTGAAAGAAATATTAATCGGG

               1651   -   1701
UN13630        --> CTTATATGTTAAATAAATTGTATTTTCGTATGACATAGGAAATAACGCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY435065       <-- CTTATATGTTAAATAAATTGatttcg........................
EX777278       <-- CTTATATGTTAAATAAATTGTATTTTCGTATGAC................
FD582596       <-- CTTATATGTT........................................
EV532335       <-- CTTATATGTT........................................
FD977637       <-- CTTATATGTTAAATAAATTGTATTTTCGTATGACATAGGAAATAACGCAA
EY926496       <-- CTTATATGTTAAATAGATTGTATTTTCGTATGACg...............
FD981978       --> ..................................................
EY930255       --> ..................................................
EV528301       --> ..................................................
EW714547       --> ..................................................
EX773490       --> ..................................................
FD535398       --> CTTATATGTTAAATAAATTGTATTTTCGTATGAC................
EV524680       --> CTTATATGTTAA-TAAATTGTATTTTCGTA....................
FD548285       --> CTTATATGTTAAATAAATTGTATTTTCGTATG..................

               1701   -   1751
UN13630        --> TTAGTC
                   ~~~~~~
FY435065       <-- ......
EX777278       <-- ......
FD582596       <-- ......
EV532335       <-- ......
FD977637       <-- TTAGTC
EY926496       <-- ......
FD981978       --> ......
EY930255       --> ......
EV528301       --> ......
EW714547       --> ......
EX773490       --> ......
FD535398       --> ......
EV524680       --> ......
FD548285       --> ......