RadishBase

| | | |
Alignment for radish unigene UN13642

               -5     -     45
UN13642        --> ......GAAAAGAAAAAGAAAA--GAAAAAGACCAAACAGGAAAAGAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY937343       <-- ..................................................
FD574671       <-- ..................................................
EY937194       <-- ..................................................
FD945096       <-- ..................................................
FD575695       <-- ..................................................
EW716328       --> ......GAAAAGAAAA-GAAAA--GAAAAAGACCAAACAGGAAAAGAAAG
FD534956       --> ....ggtgAAAGAAAA-GAAAA--GAAAAAGACCAAACAGGAAAAGAAAG
FY437137       --> cggcacgaggAGAAAAAGAAAA-AGAAAAAGACCAAACAGGAAAAGAAAG
EY941847       --> .........ggGAAAAAGAAAAAGGAAAAAGACCAAACAGGAAAAGAAAG
EX765299       --> .........ggagAAAAGAAAA--GAAAAAGACCAAACAGGAAAAGAAAG
EY904751       --> ................................ggAAACAGGAAAAGTAAG
EX773255       --> .............................................GAAAG
FD571953       --> .............................................GAAAG
EY912830       --> .............................................ggAAG
FD543898       --> .............................................gtAAG
EX762053       --> ..................................................
FD989734       --> ..................................................
FY453706       --> ..................................................
FY439237       --> ..................................................
FY446761       --> ..................................................
FY449255       --> ..................................................
FD570715       --> ..................................................
EY941664       --> ..................................................
FD949442       --> ..................................................
EW726297       --> ..................................................

               45     -     95
UN13642        --> AATGTCAGACGTAGAACAAGAAGAAGAAACGTCAAGTGCTG---TTAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY937343       <-- ..................................................
FD574671       <-- ..................................................
EY937194       <-- ..................................................
FD945096       <-- ..................................................
FD575695       <-- ..................................................
EW716328       --> AATGTCAGACGTAGAACAAGAAGAAGAAACGTCAAGTGCTG---TTAGAG
FD534956       --> AATGTCAGACGTAGAACAAGAAGAAGAAACGTCAAGTGCTG---TTAGAG
FY437137       --> AATGTCAGACGTAGAACAAGAAGAAGAAACGTCAAGTGCTG---TTAGAG
EY941847       --> AATGTCAGACGTAGAACAAGAAGAAGAAACGTCAAGTGCTG---TTAGAG
EX765299       --> AATGTCAGACGTAGAACAAGAAGAAGAAACGTCAAGTGCTG---TTAGAG
EY904751       --> AATGTCAGACGTAGAACAAGAAGGAGAAACGTCAAGTGCTG---TTAGAG
EX773255       --> AATGTCAGACGTAGAACAAGAAGAAGAAACGTCAAGTGCTG---TTAGGG
FD571953       --> AATGTCAGACGTAGAACAAGAAGAAGAAACGTCAAGTGCTG---TTAGAG
EY912830       --> AATGTCAGACGTAGAACAAGAAGAAGAAACGTCGAGTGCTG---TTAGAG
FD543898       --> AATGTCAGACGCAGAACAAGAAGAAGAAACGTCAAGTGCTGCTGTTAGAG
EX762053       --> ....TCAGACGTAGAACAAGAAGAAGAAACGTCAAGTGCTG---TTAGAG
FD989734       --> ....TCAGACGTAGAACAAGAAGAAGAAACGTCAAGTGCTG---TTAGAG
FY453706       --> ....TCAGACGTAGAACAAGAAGAAGAAACGTCAAGTGCTG---TTAGAG
FY439237       --> ...................GAAGAAGAA-CGTCAAGTGCTG---TTAGAG
FY446761       --> ......................GAAGAAACGTCAAGTGCTG---TTAGAG
FY449255       --> .................................................G
FD570715       --> ..................................................
EY941664       --> ..................................................
FD949442       --> ..................................................
EW726297       --> ..................................................

               95     -    145
UN13642        --> GTTCGTTAAGTTTCGATCTTCCCGAGGAAGTCCTTCAAGTCTTACCGTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY937343       <-- ..................................................
FD574671       <-- ..................................................
EY937194       <-- ..................................................
FD945096       <-- ..................................................
FD575695       <-- ..................................................
EW716328       --> GTTCGTTAAGTTTCGATCTTCCCGAGGAAGTCCTTCAAGTCTTACCGTCC
FD534956       --> GTTCGTTAAGTTTCGATCTTCCCGAGGAGGTCCTTCAAGTCTTACCGTCC
FY437137       --> GTTCGTTAAGTTTCGATCTTCCCGAGGAAGTCCTTCAAGTCTTACCGTCC
EY941847       --> GTTCGTTAAGTTTCGATCTTCCCGAGGAAGTCCTTCAAGTCTTACCGTCC
EX765299       --> GTTCGTTAAGTTTCGATCTTCCCGAGGAAGTCCTTCAAGTCTTACCGTCC
EY904751       --> GTTCGTTAAGTTTCGATCTTCCCGAGGAAGTCCTTCAAGTCTTACCGTCC
EX773255       --> GTTCGTTAAGTTTCGATCTTCCCGAGGAAGTCCTTCAAGTCTTACCGTCC
FD571953       --> GTTCGTTAAGTTTCGATCTTCCCGAGGAAGTCCTTCAAGTCTTACCGTCC
EY912830       --> GTTCGTTAAGTTTCGATCTTCCCGAGGAAGTCCTTCAAGTCTTACCGTCC
FD543898       --> GTTCGTTAAGTTTCGATCTTCCCGAGGAAGTCCTTCAAGTCCTACCATCC
EX762053       --> GTTCGTTAAGTTTCGATCTTCCCGAGGAAGTCCTTCAAGTCTTACCGTCC
FD989734       --> GTTCGTTAAGTTTCGATCTTCCCGAGGAAGTCCTTCAAGTCTTACCGTCC
FY453706       --> GTTCGTTAAGTTTCGATCTTCCCGAGGAAGTCCTTCAAGTCTTACCGTCC
FY439237       --> GTTCGTTAAGTTTCGATCTTCCCGAGGAAGTCCTTCAAGTCTTACCGTCC
FY446761       --> GTTCGTTAAGTTTCGATCTTCCCGAGGAAGTCCTTCAAGTCTTACCGTCC
FY449255       --> GTTCGTTAAGTTTCGATCTTCCCGAGGAAGTCCTTCAAGTCTTACCGTCC
FD570715       --> ..................................................
EY941664       --> ..................................................
FD949442       --> ..................................................
EW726297       --> ..................................................

               145    -    195
UN13642        --> GATCCATTCGAGCAGCTGGATGTGGCCCGCAAAATCACATCCATTGCTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY937343       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD574671       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY937194       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD945096       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD575695       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EW716328       --> GATCCATTCGAGCAGCTGGATGTGGCCCGCAAAATCACATCCATTGCTCT  Raphanus sativus var. oleiformis
FD534956       --> GATCCATTCGAGCAGCTGGATGTGGCCCGCAAAATCACATCCATTGCTCT  Raphanus raphanistrum subsp. maritimus
FY437137       --> GATCCATTCGAGCAGCTGGATGTTGCCCGCAAAATCACATCCATTGCTCT  Raphanus sativus cv GSK3-1
EY941847       --> GATCCATTCGAGCAGCTGGATGTTGCCCGCAAAATCACATCCATTGCTCT  Raphanus sativus cv Early Scarlet Globe
EX765299       --> GATCCATTCGAGCAGCTGGATGTGGCCCGCAAAATCACATCCATTGCTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY904751       --> GATCCATTCGAGCAGCTGGATGTGGCCCGCAAAATCACATCCATTGCTCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX773255       --> GATCCATTCGAGCAGCTGGATGTGGCCCGCAAAATCACATCCATTGCTCT  Raphanus raphanistrum subsp. landra
FD571953       --> GATCCATTCGAGCAGCTGGATGTTGCCCGCAAAATCACATCCATTGCTCT  Raphanus sativus cv Early Scarlet Globe
EY912830       --> GATCCATTCGAGCAGCTGGATGTGGCCCGCAAAATCACATCCATTGCTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD543898       --> GATCCATTCGAGCAGCTGGATGTGGCCCGCAAAATCACATCCATTGCTCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX762053       --> GATCCATTCGAGCAGCTGGATGTGGCCCGCAAAATCACATCCATTGCTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD989734       --> GATCCATTCGAGCAGCTGGATGTGGCCCGCAAAATCACATCCATTGCTCT  Raphanus raphanistrum subsp. landra
FY453706       --> GATCCATTCGAGCAGCTGGATGTTGCCCGCAAAATCACATCCATTGCTCT  Raphanus sativus cv GSK3-1
FY439237       --> GATCCATTCGAGCAGCTGGATGTTGCCCGCAAAATCACATCCATTGCTCT  Raphanus sativus cv GSK3-1
FY446761       --> GATCCATTCGAGCAGCTGGATGTTGCCCGCAAAATCACATCCATTGCTCT  Raphanus sativus cv GSK3-1
FY449255       --> GATCCATTCGAGCAGCTGGATGTTGCCCGCAAAATCACATCCATTGCTCT  Raphanus sativus cv GSK3-1
FD570715       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY941664       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD949442       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EW726297       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               195    -    245
UN13642        --> CTCGACACGTGTCTCTGCTCTCGAATCAGAGTCGTCCGATCTCCGTGAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY937343       <-- ..................................................
FD574671       <-- ..................................................
EY937194       <-- ..................................................
FD945096       <-- ..................................................
FD575695       <-- ..................................................
EW716328       --> CTCGACACGTGTCTCTGCTCTCGAATCAGAGTCGTCCGATCTCCGTGAGC
FD534956       --> CTCGACACGTGTCTCTGCTCTCGAATCAGAGTCGTCCGATCTCCGTGGGC
FY437137       --> CTCGACACGTGTCTCTGCTCTCGAATCAGAGTCGTCCGATCTCCGTGAGC
EY941847       --> CTCGACACGTGTCTCTGCTCTCGAATCAGAGTCGTCCGATCTCCGTGAGC
EX765299       --> CTCGACACGTGTCTCTGCTCTCGAATCAGAGTCGTCCGATC--CGTGAGC
EY904751       --> CTCGACACGTGTCTCTGCTCTCGAATCAGAGTCGTCCGATCTCCGTGAGC
EX773255       --> CTCGACACGTGTCTCTGCTCTCGAATCAGAGTCGTCCGATCTCCGTGAGC
FD571953       --> CTCGACACGTGTCTCTGCTCTCGAATCAGAGTCGTCCGATCTCCGTGAGC
EY912830       --> CTCGACACGTGTCTCTGCTCTCGAATCAGAGTCGTCCGATCTCCGTGAGC
FD543898       --> CTCGACACGTGTCTCTGCTCTCGAATCAGAGTCGTCCGATCTTCGTGAGC
EX762053       --> CTCGACACGTGTCTCTGCTCTCGAATCAGAGTCGTCCGATCTCCGTGAGC
FD989734       --> CTCGACACGTGTCTCTGCTCTCGAATCAGAGTCGTCCGATCTCCGTGAGC
FY453706       --> CTCGACACGTGTCTCTGCTCTCGAATCAGAGTCGTCCGATCTCCGTGAGC
FY439237       --> CTCGACACGTGTCTCTGCTCTCGAATCAGAGTCGTCCGATCTCCGTGAGC
FY446761       --> CTCGACACGTGTCTCTGCTCTCGAATCAGAGTCGTCCGATCTCCGTGAGC
FY449255       --> CTCGACACGTGTCTCTGCTCTCGAATCAGAGTCGTCCGATCTCCGTGAGC
FD570715       --> ............................GAGTCGTCCGATCTCCGTGAGC
EY941664       --> ..................................................
FD949442       --> ..................................................
EW726297       --> ..................................................

               245    -    295
UN13642        --> TTCTCGCCGAGAAAGACAATCAAATCGCCGAGCTCCAATCACACGC-GGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY937343       <-- ..................................................
FD574671       <-- ..................................................
EY937194       <-- ..................................................
FD945096       <-- ..................................................
FD575695       <-- ..................................................
EW716328       --> TTCTCGCCGAGAAAGACAATCAAATCGCCGAGCTCCAATCACACGC-GGA
FD534956       --> TTCTCGCCGAGAAAGACAATCAAATCGCCGAGCTCCAATCACACGC-GGA
FY437137       --> TTCTCGCCGAGAAAGACAATCAAATCGCCGAGCTCCAATCACACGCNGGA
EY941847       --> TTCTCGCCGAGAAAGACAATCAAATCGCCGAGCTCCAATCACACGC-GGA
EX765299       --> TTCTCGCCGAGAAAGACAATCAAATCGCCGAGCTCCAATCACACGC-GGA
EY904751       --> TTCTCGCCGAGAAAGACAATCAAATCGCCGAGCTCCAATCACACGC-GGA
EX773255       --> TTCTCGCCGAGAAAGACAATCAAATCGCCGAGCTCCAATCACACGC-GGA
FD571953       --> TTCTCGCCGAGAAAGACAATCAAATCGCCGAGCTCCAATCACACGC-GGA
EY912830       --> TTCTCGCCGAGAAAGACAATCAAATCGCCGAGCTCCAATCACACGC-GGA
FD543898       --> TTCTCGCCGAGAAAGACAATCAAATCGCCGAGCTCCAATCACACGT-GGA
EX762053       --> TTCTCGCCGAGAAAGACAATCAAATCGCCGAGCTCCAATCACACGC-GGA
FD989734       --> TTCTCGCCGAGAAAGACAATCAAATCGCCGAGCTCCAATCACACGC-GGA
FY453706       --> TTCTCGCCGAGAAAGACAATCAAATCGCCGAGCTCCAATCACACGC-GGA
FY439237       --> TTCTCGCCGAGAAAGACAATCAAATCGCCGAGCTCCAATCACACGC-GGA
FY446761       --> TTCTCGCCGAGAAAGACAATCAAATCGCCGAGCTCCAATCACACGC-GGA
FY449255       --> TTCTCGCCGAGAAAGACAATCAAATCGCCGAGCTCCAATCACACGC-GGA
FD570715       --> TTCTCGCCGAGAAAGACAATCAAATCGCCGAGCTCCAATCACACGC-GGA
EY941664       --> ..................................................
FD949442       --> ..................................................
EW726297       --> ..................................................

               295    -    345
UN13642        --> GTCTCTCGACGCGTCTCTCTCCGACGCGTTGCAAAAGCTTTCTCTCGCCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY937343       <-- ..................................................
FD574671       <-- ..................................................
EY937194       <-- ..................................................
FD945096       <-- ..................................................
FD575695       <-- ..................................................
EW716328       --> GTCTCTCGACGCGTCTCTCTCCGACGCGTTGCAAAAGCTTTCTCTCGCCG
FD534956       --> GTCTCTCGACGCGTCTCTCTCCGACGCGTTGCAAAAGCTTTCTCTCGCCG
FY437137       --> GTCTCTCGACGCGTCTCTCTCCGACGCGTTGCAAAAGCTTTCTCTCGCCG
EY941847       --> GTCTCTCGACGCGTCTCTGTCCGACGTGTTGCAAAAGCTTTCTCTCGCCG
EX765299       --> GTCTCTCGACGCGTCTCTCTCCGACGCGTTGCAAAAGCTTTCTCTCGCCG
EY904751       --> GTCTCTCGACGCGTCTCTCTCCGACGCGTTGCAAAAGCTTTCTCTCGCCG
EX773255       --> GTCTCTCGACGCGTCTCTCTCCGACGCGTTGCAAAAGCTTTCTCTCGCCG
FD571953       --> GTCTCTCGACGCGTCTCTGTCCGACGCGTTGCAAAAGCTTTCTCTCGCCG
EY912830       --> GTCTCTCGACGCGTCTCTCTCCGACGCGTTGCAAAAGCTTTCTCTCGCCG
FD543898       --> GTCTCTCGACGCGTCTCTCTCCGACGCGTTGCAAAAGCTTTCTCTCGCCG
EX762053       --> GTCTCTCGACGCGTCTCTCTCCGACGCGTTGCAAAAGCTTTCTCTCGCCG
FD989734       --> GTCTCTCGACGCGTCTCTCTCCGACGCGTTGCAAAAGCTTTCTCTCGCCG
FY453706       --> GTCTCTCGACGCGTCTCTCTCCGACGCGTTGCAAAAGCTTTCTCTCGCCG
FY439237       --> GTCTCTCGACGCGTCTCTCTCCGACGCGTTGCAAAAGCTTTCTCTCGCCG
FY446761       --> GTCTCTCGACGCGTCTCTCTCCGACGCGTTGCAAAAGCTTTCTCTCGCCG
FY449255       --> GTCTCTCGACGCGTCTCTCTCCGACGCGTTGCAAAAGCTTTCTCTCGCCG
FD570715       --> GTCTCTCGACGCGTCTCTGTCCGACGCGTTGCAAAAGCTTTCTCTCGCCG
EY941664       --> ..................................................
FD949442       --> ..................................................
EW726297       --> ..................................................

               345    -    395
UN13642        --> AAGATGAAAAGGAGAATCTGGTCAGAGAGAACTCTTCGTTGTCGAGTACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY937343       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD574671       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY937194       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD945096       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD575695       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EW716328       --> AAGATGAAAAGGAGAATCTGGTCAGAGAGAACTCTTCGTTGTCGAGTACT  Raphanus sativus var. oleiformis
FD534956       --> AAGATGAAAGGGAGAATCTGGTGAGAGAGAACTCTTCGTTGTCGAGTACT  Raphanus raphanistrum subsp. maritimus
FY437137       --> AAGATGAAAAGGAGAATCTGGTCAGAGAGAACTCTTCGTTGTCGAGTACT  Raphanus sativus cv GSK3-1
EY941847       --> AAGATGAAAAGGAGAATCTGGTCAGAGAGAACTCTTCGTTGTCGAGTACT  Raphanus sativus cv Early Scarlet Globe
EX765299       --> AAGATGAAAGGGAGAATCTGGTGAGAGAGAACTCTTCGTTGTCGAGTACT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY904751       --> AAGATGAAAAGGAGAATCTGGTGAGAGAGAACTCTTCGTTGTCGAGTACT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX773255       --> AAGATGAAAAGGAGAATCTGGTCAGAGAGAACTCTTCGTTGTCGAGTACT  Raphanus raphanistrum subsp. landra
FD571953       --> AAGATGAAAAGGAGAATCTGGTCAGAGAGAACTCTTCGTTGTCGAGTACT  Raphanus sativus cv Early Scarlet Globe
EY912830       --> AAGATGAAAGGGAGAATCTGGTGAGAGAGAACTCTTCGTTGTCGAGTACT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD543898       --> AAGATGAAAAGGAGAATCTGGTCAGAGAGAACTCATCGTTGTCGAGTACT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX762053       --> AAGATGAAAGGGAGAATCTGGTGAGAGAGAACTCTTCGTTGTCGAGTACT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD989734       --> AAGATGAAAAGGAGAATCTGGTCAGAGAGAACTCTTCGTTGTCGAGTACT  Raphanus raphanistrum subsp. landra
FY453706       --> AAGATGAAAAGGAGAATCTGGTCAGAGAGAACTCTTCGTTGTCGAGTACT  Raphanus sativus cv GSK3-1
FY439237       --> AAGATGAAAAGGAGAATCTGGTCAGAGAGAACTCTTCGTTGTCGAGTACT  Raphanus sativus cv GSK3-1
FY446761       --> AAGATGAAAAGGAGAATCTGGTCAGAGAGAACTCTTCGTTGTCGAGTACT  Raphanus sativus cv GSK3-1
FY449255       --> AAGATGAAAAGGAGAATCTGGTCAGAGAGAACTCTTCGTTGTCGAGTACT  Raphanus sativus cv GSK3-1
FD570715       --> AAGATGAAAAGGAGAATCTGGTCAGAGAGAACTCTTCGTTGTCGAGTACT  Raphanus sativus cv Early Scarlet Globe
EY941664       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD949442       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EW726297       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               395    -    445
UN13642        --> GTCAGGAGACTCCAGAGAGATGTCTCTAAGCTTGAGGGTTTCAGGAAGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY937343       <-- ..................................................
FD574671       <-- ..................................................
EY937194       <-- ..................................................
FD945096       <-- ..................................................
FD575695       <-- ..................................................
EW716328       --> GTCAGGAGACTCCAGAGAGATGTCTCTAAGCTTGAGGGTTTCAGGAAGAC
FD534956       --> GTCAGGAGACTCCAGAGAGATGTCTCTAAGCTTGAGGGTTTCAGGAAGAC
FY437137       --> GTCAGGAGACTCCAGAGAGATGTCTCTAAGCTTGAGGGTTTCAGGAAGAC
EY941847       --> GCCAGGAGACTCCAGAGAGATGTCTCTAAGCTTGAGGGTTTCAGGAAGAC
EX765299       --> GTCAGGAGACTCCAGAGAGATGTCTCTAAGCTTGAGGGTTTCAGGAAGAC
EY904751       --> GTCAGGAGACTCCAGAGAGATGTCTCTAAGCTTGAGGGTTTCAGGAAGAC
EX773255       --> GTCAGGAGACTCCAGAGGGATGTCTCTAAGCTTGAGGGTTTCAGGAAGAC
FD571953       --> GTCAGGAGACTCCAGAGAGATGTCTCTAAGCTTGAGGGTTTCAGGAAGAC
EY912830       --> GTCAGGAGACTCCAGAGAGATGTCTCTAAGCTTGAGGGTTTCAGGAAGAC
FD543898       --> GTCAGGAGACTCCAGAGAGATGTCTCTAAGCTTGAGGGTTTCAGGAAGAC
EX762053       --> GTCAGGAGACTCCAGAGAGATGTCTCTAAGCTTGAGGGTTTCAGGAAGAC
FD989734       --> GTCAGGAGACTCCAGAGGGATGTCTCTAAGCTTGAGGGTTTCAGGAAGAC
FY453706       --> GTCAGGAGACTCCAGAGAGATGTCTCTAAGCTTGAGGGTTTCAGGAAGAC
FY439237       --> GTCAGGAGACTCCAGAGAGATGTCTCTAAGCTTGAGGGTTTCAGGAAGAC
FY446761       --> GTCAGGAGACTCCAGAGAGATGTCTCTAAGCTTGAGGGTTTCAGGAAGAC
FY449255       --> GTCAGGAGACTCCAGAGAGATGTCTCTAAGCTTGAGGGTTTCAGGAAGAC
FD570715       --> GTCAGGAGACTCCAGAGAGATGTCTCTAAGCTTGAGGGTTTCAGGAAGAC
EY941664       --> ..................................................
FD949442       --> ..................................................
EW726297       --> ..................................................

               445    -    495
UN13642        --> GCTTATGATGTCTCTTCAAGACGACGACCAAAATGCAGGAACAACACAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY937343       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD574671       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY937194       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD945096       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD575695       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EW716328       --> GCTTATGATGTCTCTTCAAGACGACGACCAAAATGCAGGAACGACACAAA  Raphanus sativus var. oleiformis
FD534956       --> GCTTATGATGTCTCTTCAAGACGACGACCAAAATGCAGGAACGACACAAA  Raphanus raphanistrum subsp. maritimus
FY437137       --> GCTTATGATGTCTC....................................  Raphanus sativus cv GSK3-1
EY941847       --> GCTTATGATGCCTCTTCAAGACGACGACCAAAATGCAGGAACAACACAAA  Raphanus sativus cv Early Scarlet Globe
EX765299       --> GCTTATGATGTCTCTTCAAGACGACGACCAAAATGCAGGAACGGCACAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY904751       --> GCTTATGATGTCTCTTCAAGACGACGACCAAAATGCggg...........  Raphanus raphanistrum subsp. raphanistrum (MS)
EX773255       --> GCTTATGATGTCTCTTCAAGACGACGACCAAAATGCAGGAACAACACAAA  Raphanus raphanistrum subsp. landra
FD571953       --> GCTTATGATGTCTCTTCAAGACGACGACCAAAATGCAGGAACAACACAAA  Raphanus sativus cv Early Scarlet Globe
EY912830       --> GCTTATGATGTCTCTTCAAGACGACGACCAAAATGCAGGAACGACACAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD543898       --> GCTTATGATGTCTCTTCAAGACGACGACCAAAATGCAGGAACAACACAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX762053       --> GCTTATGATGTCTCTTCAAGACGACGACCAAAATGCAGGAACGACGCAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD989734       --> GCTTATGATGTCTCTTCAAGACGACGACCAAAATGCAGGAACAACACAAA  Raphanus raphanistrum subsp. landra
FY453706       --> GCTTATGATGTCTCTTCAAGACGACGACCAAAATGCAGGAACAACACAAA  Raphanus sativus cv GSK3-1
FY439237       --> GCTTATGATGTCTCTTCAAGACGACGACCAAAATGCAGGAACAACACAAA  Raphanus sativus cv GSK3-1
FY446761       --> GCTTATGATGTCTCTTCAAGACGACGACCAAAATGCAGGAACAACACAAA  Raphanus sativus cv GSK3-1
FY449255       --> GCTTATGATGTCTCTTCAAGACGACGACCAAAATGCAGGAACAACACAAA  Raphanus sativus cv GSK3-1
FD570715       --> GCTTATGATGTCTCTTCAAGACGACGACCAAAATGCAGGAACAACACAAA  Raphanus sativus cv Early Scarlet Globe
EY941664       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD949442       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EW726297       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               495    -    545
UN13642        --> TCATTGCTAAGCCAACACCAAACGATGAAGATTCTCCATTTCAACCTTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY937343       <-- ..................................................
FD574671       <-- ..................................................
EY937194       <-- ..................................................
FD945096       <-- ..................................................
FD575695       <-- ..................................................
EW716328       --> TCATTGCTAAGCCAACACCAAACGATGAAGATTCTCCATTTCAACCTTCA
FD534956       --> TCATTGCTAAGCCAACACCAAACGATGAAGATTCTCCATTTCAACCTTCA
FY437137       --> ..................................................
EY941847       --> TCATTGCTAAGCCAACACCAAACGATGAAGATTCTCCATTTCAACCTTCA
EX765299       --> TCATTGCTAAGCCAACACCAAACGATGAAGATTCTCCATTTCAACCTTCA
EY904751       --> ..................................................
EX773255       --> TTATTGCTAAGCCAACACCAAATGATGAAGATTCTCCATTTCAACCTTCA
FD571953       --> TCATTGCTAAGCCAACACCAAACGATGAAGATTCTCCATTTCAACCTTCA
EY912830       --> TCATTGCTAAGCCAACACCAAACGATGAAGATTCTCCATTTCAACCTTCA
FD543898       --> TTATTGCTAAGCCAACACCAAACGATGAAGATTCTCCATTTCAACCTTCA
EX762053       --> TCATTGCTAAGCCAACACCAAACGATGAAGATTCTCCATTTCAACCTTCA
FD989734       --> TTATTGCTAAGCCAACACCAAATGATGAAGATTCTCCATTTCAACCTTCA
FY453706       --> TCATTGCTAAGCCAACACCAAACGATGAAGATTCTCCATTTCAACCTTCA
FY439237       --> TCATTGCTAAGCCAACACCAAACGATGAAGATTCTCCATTTCAACCTTCA
FY446761       --> TCATTGCTAAGCCAACACCAAACGATGAAGATTCTCCATTTCAACCTTCA
FY449255       --> TCATTGCTAAGCCAACACCAAACGATGAAGATTCTCCATTTCAACCTTCA
FD570715       --> TCATTGCTAAGCCAACACCAAACGATGAAGATTCTCCATTTCAACCTTCA
EY941664       --> ..................................................
FD949442       --> ..................................................
EW726297       --> ..................................................

               545    -    595
UN13642        --> AGATATTCATCAATCCAGTCTCAAGCTTCTGAAGCTGTTGAACCAGC---
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY937343       <-- ............ATCCAGCCTCAAACTTCTGAAGCTGTTGAGCCAGC---  Raphanus sativus cv Early Scarlet Globe
FD574671       <-- .....................CAAGCTTCTGAAGCTGTTGAGCCAGC---  Raphanus sativus cv Early Scarlet Globe
EY937194       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD945096       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD575695       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EW716328       --> AGATATTCATCAATCCAATCTCAAGCTTCTGAAGTTGTTGAACCAGCAGC  Raphanus sativus var. oleiformis
FD534956       --> AGATATTCATCAATCCAGTCTCAAGCTTCTGAAGTTGTTGAACCAGCAGC  Raphanus raphanistrum subsp. maritimus
FY437137       --> ..................................................  Raphanus sativus cv GSK3-1
EY941847       --> AGATATTCATCAATCCAGCCTCAAACTTCTGAAGCTGTTGAGCCAGC---  Raphanus sativus cv Early Scarlet Globe
EX765299       --> AGATATTCATCAATCCAGTCTCAAGCTTCTGAAGTTGTTGAACCAGCAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY904751       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX773255       --> AGATGTTCATCAATCCAATCTCAAGCTTCTGAAGCTGTTGAACCAAC---  Raphanus raphanistrum subsp. landra
FD571953       --> AGATATTCATCAATCCAGTCTCAAGCTTCTGAAGCTGTTGAGCCAGC---  Raphanus sativus cv Early Scarlet Globe
EY912830       --> AGATATTCATCAATCCAGTCTCAAGCTTCTGAAGTTGTTGAACCAGCAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD543898       --> AGATATTCATCAATCCAGTCTCAAGCTTCTGAAGCTGTTGAACCAGC---  Raphanus raphanistrum subsp. raphanistrum (MS)
EX762053       --> AGATATTCATCAATCCAGTCTCAAGCTTCTGAAGTTGTTGAACCAGCAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD989734       --> AGATATTCATCAATCCAATCTCAAGCTTCTGAAGCTGTTGAACCAAC---  Raphanus raphanistrum subsp. landra
FY453706       --> AGATATTCATCAATCCAGTCTCAAGCTTCTGAAGCTGTTGAACCAGC---  Raphanus sativus cv GSK3-1
FY439237       --> AGATATTCATCAATCCAGTCTCAAGCTTCTGAAGCTGTTGAACCAGC---  Raphanus sativus cv GSK3-1
FY446761       --> AGATATTCATCAATCCAGTCTCAAGCTTCTGAAGCTGTTGAACCAGC---  Raphanus sativus cv GSK3-1
FY449255       --> AGATATTCATCAATCCAGTCTCAAGCTTCTGAAGCTGTTGAACCAGC---  Raphanus sativus cv GSK3-1
FD570715       --> AGATATTCATCAATCCAGTCTCAAGCTTCTGAAGCTGTTGAGCCAGC---  Raphanus sativus cv Early Scarlet Globe
EY941664       --> ............ATCCAGTCTCAAGCTTCTGAAGCTGTTGAGCCAGC---  Raphanus sativus cv Early Scarlet Globe
FD949442       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EW726297       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               595    -    645
UN13642        --> TCCAGTGGACAACGAAAGCGAAG------CTCCTAAACCGAGTTTATCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY937343       <-- TCCAGTTGACAACGAAAGCGAAG------CTTCTAAACCGAGTTTATCGA  Raphanus sativus cv Early Scarlet Globe
FD574671       <-- TCCAGTTGACAACGAAAGCGAAG------CTTCTAAACCGAGTTTATCGA  Raphanus sativus cv Early Scarlet Globe
EY937194       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD945096       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD575695       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EW716328       --> TCCAGTGGACAACGAAACCGAAG------CTCCTAAACCGAGTTTATCGA  Raphanus sativus var. oleiformis
FD534956       --> TCCAGTGGACAACGAAAGCGAAG------CTCCTAAACCGAGTTTATCGA  Raphanus raphanistrum subsp. maritimus
FY437137       --> ..................................................  Raphanus sativus cv GSK3-1
EY941847       --> TCCAGTTGACAACGAAAGCGAAG------CTTCTAAACCGAGTTTAT...  Raphanus sativus cv Early Scarlet Globe
EX765299       --> TCCAGTGGACAACGAAAGCGAAG------CTCCTAAACCGAGTTTATCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY904751       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX773255       --> TCCAGTGGACAACGAAAGCGAAGTGGCAGCTCCTAAACCGAGTTTATCAA  Raphanus raphanistrum subsp. landra
FD571953       --> TCCAGTTGACAACGAAAGCGAAG------CTTCTAAACCGAGTTTATCGA  Raphanus sativus cv Early Scarlet Globe
EY912830       --> TCCAGTGGACAACGAAAGCGAAG------CTCCTAAACCGAGTTTATCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD543898       --> TCCAGTGGACAACGAAAGCGAAG------CTCCTAAACCGAGTTTATCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX762053       --> TCCAGTGGACAACGAAAGCGAAG------CTCCTAAACCGAGTTTATCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD989734       --> TCCAGTGGACAACGAAAGCGAAGTGGCAGCTCCTAAACCGAGTTTATCAA  Raphanus raphanistrum subsp. landra
FY453706       --> TCCAGTGGACAACGAAAGCGAAG------CTCCTAAACCGAGTTTATCAA  Raphanus sativus cv GSK3-1
FY439237       --> TCCAGTGGACAACGAAAGCGAAG------CTCCTAAACCGAGTTTATCAA  Raphanus sativus cv GSK3-1
FY446761       --> TCCAGTGGACAACGAAAGCGAAG------CTCCTAAACCGAGTTTATCAA  Raphanus sativus cv GSK3-1
FY449255       --> TCCAGTGGACAACGAAAGCGAAG------CTCCTAAACCGAGTTTATCAA  Raphanus sativus cv GSK3-1
FD570715       --> TCCAGTTGACAACGAAAGCGAAG------CTTCTAAACCGAGTTTATCGA  Raphanus sativus cv Early Scarlet Globe
EY941664       --> TCCAGTTGACAACGAAAGCGAAG------CTTCTAAACCGAGTTTATCGA  Raphanus sativus cv Early Scarlet Globe
FD949442       --> gCCAGTTGACAACGAAAGCGAAG------CTTCTAAACCGAGTTTATCGA  Raphanus sativus cv Early Scarlet Globe
EW726297       --> ..............................................gCGA  Raphanus sativus cv Early Scarlet Globe

               645    -    695
UN13642        --> ACAGTGTTCCATTAGTATCTCAGACTGCTACGCCTCGGCTTACTCCTCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY937343       <-- ACAGTGTTCCATTAGTATCTCAGACTGCTACGCCTCGGCTTACTCCTCCT  Raphanus sativus cv Early Scarlet Globe
FD574671       <-- ACAGTGTTCCATTAGTATCTCAGACTGCTACGCCTCGGCTTACTCCTCCT  Raphanus sativus cv Early Scarlet Globe
EY937194       <-- ....................CAGACTGCTACGCCTCGGCTTACTCCTCCT  Raphanus sativus cv Early Scarlet Globe
FD945096       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD575695       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EW716328       --> ACAGTGTTCCATTAGTATCTCAGACTGCTACGCCTCGGCTTACTCCTCCT  Raphanus sativus var. oleiformis
FD534956       --> ACAGTGTTCCATTAGTATCTCAGACTGCTACGCCTCGGCTTACTCCTCCT  Raphanus raphanistrum subsp. maritimus
FY437137       --> ..................................................  Raphanus sativus cv GSK3-1
EY941847       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX765299       --> ACAGTGTTCCATTAGTATCTCAGACTGCTACGCCTCGGCTTACTCCTCCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY904751       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX773255       --> ACAGTCTTCCATTAGTATCTCAGACTGCTACGCCTCGGCTTACTCCTCCT  Raphanus raphanistrum subsp. landra
FD571953       --> ACAGTGTTCCATTAGTATCTCAGACCGCTACGCCTCGGCTTACTCCTCCT  Raphanus sativus cv Early Scarlet Globe
EY912830       --> ACAGTGTTCCATTAGTATCTCAGACTGCTACGCCTCGGCTTACTCCTCCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD543898       --> ACAGTCTTCCATTAGTATCTCAGACTGCTACGCCTCGGCTTACTCCTCCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX762053       --> ACAGTGTTCCATTAGTATCTCAGACTGCTACGCCTCGGCTTACTCCTCCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD989734       --> ACAGTCTTCCATTAGTATCTCAGACTGCTACGCCTCGGCTCACTCCTCCT  Raphanus raphanistrum subsp. landra
FY453706       --> ACAGTCTTCCATTAGTATCTCAGACTGCTACGCCTCGGCTTACTCCTCCT  Raphanus sativus cv GSK3-1
FY439237       --> ACAGTCTTCCATTAGTATCTCAGACTGCTACGCCTCGGCTTACTCCTCCT  Raphanus sativus cv GSK3-1
FY446761       --> ACAGTCTTCCATTAGTATCTCAGACTGCTACGCCTCGGCTTACTCCTCCT  Raphanus sativus cv GSK3-1
FY449255       --> ACAGTCTTCCATTAGTATCTCAGACTGCTACGCCTCGGCTTACTCCTCCT  Raphanus sativus cv GSK3-1
FD570715       --> ACAGTGTTCCATTAGTATCTCAGACTGCTACGCCTCGGCTTACTCCTCCT  Raphanus sativus cv Early Scarlet Globe
EY941664       --> ACAGTGTTCCATTAGTATCTCAGACTGCTACGCCTCGGCTTACTCCTCCT  Raphanus sativus cv Early Scarlet Globe
FD949442       --> ACAGTGTTCCATTAGTATCTCAGACTGCTACGCCTCGGCTTACTCCTCCT  Raphanus sativus cv Early Scarlet Globe
EW726297       --> ACAGTGTTCCATTAGTATCTCAGACTGCTACGCCTCGGCTTACTCCTCCT  Raphanus sativus cv Early Scarlet Globe

               695    -    745
UN13642        --> GGTTCTCCACCAGCATTATCAGCTTCTAGTACCCCTAAAACGACTTCAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY937343       <-- GGTTCTCCACCAGCATTATCAGCTTCTAGTACCCCTAAAACGACTTCAAG  Raphanus sativus cv Early Scarlet Globe
FD574671       <-- GGTTCTCCACCAGCATTATCAGCTTCTAGTACCCCTAAAACGACTTCAAG  Raphanus sativus cv Early Scarlet Globe
EY937194       <-- GGTTCTCCACCAGCATTATCAGCTTCTAGTACCCCTAAAACGACTTCAAG  Raphanus sativus cv Early Scarlet Globe
FD945096       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD575695       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EW716328       --> GGTTCTCCACCAGCATTATCTGCTTCTAGTACCCCTAAA-CGACTTCA-G  Raphanus sativus var. oleiformis
FD534956       --> GGTTCTCCACCAGCATTATCTGCTTCTAGTACCCCTAAAACGACTTCAAG  Raphanus raphanistrum subsp. maritimus
FY437137       --> ..................................................  Raphanus sativus cv GSK3-1
EY941847       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX765299       --> GGTTCTCCACCAGCAT-ATCTGCTTCTAGT....................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY904751       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX773255       --> GGTTCTCCACCAGCATTATCAGCTTCTAGTACCCCTAAA-CGACTTCA-G  Raphanus raphanistrum subsp. landra
FD571953       --> GGTTCTCCACCAGCATTATCAGCTTCTAGTACCCCTAAAACGTCTTCA-G  Raphanus sativus cv Early Scarlet Globe
EY912830       --> GGTTCTCCACCAGCATCATCTGCTTCTAGTACCCCTAAAACGACTTCAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD543898       --> GGTTCTCCACCAGCATTATCTGCTTCTAGTACCCCTAAA-CGACTTCA-G  Raphanus raphanistrum subsp. raphanistrum (MS)
EX762053       --> GGTTCTCCACCAGCATTATCTGCTTCTAGTACCCCTAAAACGACTTCAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD989734       --> GGTTCTCCACCAGCATTATCAGCTTCTAGTACCCCTAAAACGACTTCAAG  Raphanus raphanistrum subsp. landra
FY453706       --> GGTTCTCCACCAGCATTATCAGCTTCTAGTACCCCTAAAACGACTTCAAG  Raphanus sativus cv GSK3-1
FY439237       --> GGTTCTCCACCAGCATTATCAGCTTCTAGTACCCCTAAAACGACTTCAAG  Raphanus sativus cv GSK3-1
FY446761       --> GGTTCTCCACCAGCATTATCAGCTTCTAGTACCCC...............  Raphanus sativus cv GSK3-1
FY449255       --> GGTTCTCCACCAGCATTATCAGCTTCTAGTACCCCTAAAACGACTTCAAG  Raphanus sativus cv GSK3-1
FD570715       --> GGTTCTCCACCAGCATTATCAGCTTCTAGTACCCCTAAAACGACTTCAAG  Raphanus sativus cv Early Scarlet Globe
EY941664       --> GGTTCTCCACCAGCATTATCAGCTTCTAGTACCCCTAAAACGACTTCAAG  Raphanus sativus cv Early Scarlet Globe
FD949442       --> GGTTCTCCACCAGCATTATCAGCTTCTAGTACCCCTAAAACGACTTCAAG  Raphanus sativus cv Early Scarlet Globe
EW726297       --> GGTTCTCCACCAGCATTATCAGCTTCTAGTACCCCTAAAACGACTTCAAG  Raphanus sativus cv Early Scarlet Globe

               745    -    795
UN13642        --> ACCTATCTCCCCTCGTCGCCATTCTGTATCCTTCTCTACTACTAGAGGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY937343       <-- ACCTATCTCCCCTCGTCGCCATTCTGTATCCTTCTCTACTACTAGAGGCA
FD574671       <-- ACCTATCTCCCCTCGTCGCCATTCTGTATCCTTCTCTACTACTATAGGCA
EY937194       <-- ACCTATCTCCCCTCGTCGCCATTCTGTATCCTTCTCTACTACTAGAGGCA
FD945096       <-- ..................................TCTACTACTAGAGGCA
FD575695       <-- ..................................................
EW716328       --> A-CTATCTCCCCTCGTCGCCAT-CTGTATCCT-CTCTACTACTAG.....
FD534956       --> ACCTATCT..........................................
FY437137       --> ..................................................
EY941847       --> ..................................................
EX765299       --> ..................................................
EY904751       --> ..................................................
EX773255       --> ACCTATCTCCCCTCGTCGCCATTCTGTATCCT-CTCTACTA.........
FD571953       --> ACCTATCTCCCCTCGTCGCCATTCTGTATCCTTCTCTACTACTAGAGGCA
EY912830       --> ACCTATCTCCCCTCGTCGCCATTCTGTATCCTTCTCTACTACTAGAGGCA
FD543898       --> ACCTATCTCCCCTCGTCGCCATTCTGTGTCCTTCTCTACTACTAG.....
EX762053       --> ACCTATCTCCC-TCGTCGCCATTCTGTATCCTTCTCTACTACTAGAGGCA
FD989734       --> ACCTATCTCCCCTCGTCGCCATTCTGTATC....................
FY453706       --> ACCTATCTCCCCTCGTCGCCATTCTGTATCCTTCTCTACTACTAGAGGCA
FY439237       --> ACCTATCTCCCCTCGTCGCCATTCTGTATCCTTCTCTACTACTAGAGGCA
FY446761       --> ..................................................
FY449255       --> ACCTATCTCCCCTCGTCGCCATTCTGTATCCTTCTCTACTACTAGAGGCA
FD570715       --> ACCTATCTCCCCTCGTCGCCATTCTGTATCCTTCTCTACTACTATAGGCA
EY941664       --> ACCTATCTCCCCTCGTCGCCATTCTGTATCCTTCTCTACTACTAGAGGCA
FD949442       --> ACCTATCTCCCCTCGTCGCCATTCTGTATCCTTCTCTACTACTAGAGGCA
EW726297       --> ACCTATCTCCCCTCGTCGCCATTCTGTATCCTTCTCTACTACTAGAGGCA

               795    -    845
UN13642        --> TGTTTGATGATAATAGATCTTCTATCTCAATCTCAGAGCCTGGATCCCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY937343       <-- TGTTTGATGATAATAGATCTTCTATCTCAATCTCAGAGCCTGGATCCCAC
FD574671       <-- TGTTTGATGATAATAGATCTTCTATCTCAATCTCAGAGCCTGGATCCCAC
EY937194       <-- TGTTTGATGATAATAGATCTTCTATCTCAATCTCAGAGCCTGGATCCCAC
FD945096       <-- TGTTTGATGATAATAGATCTTCTATCTCAATCTCAGAGCCTGGATCCCAC
FD575695       <-- ..................................................
EW716328       --> ..................................................
FD534956       --> ..................................................
FY437137       --> ..................................................
EY941847       --> ..................................................
EX765299       --> ..................................................
EY904751       --> ..................................................
EX773255       --> ..................................................
FD571953       --> TGTTTGATGATAta....................................
EY912830       --> TGTTTGATGATAATAGATCTTCTATCTCA-TCTCAGAGCCTGGGTCCCAC
FD543898       --> ..................................................
EX762053       --> TGTTTGATGATA-TAGATCTTCTATCTCA-TCTCAGAGCtgggt......
FD989734       --> ..................................................
FY453706       --> TGTTTGATGATAATAGATCTTCTATCTCGATCTCAGAGCCTGGATCCCAC
FY439237       --> TGTTTGATGATAATAGATCTTCTATCTCGATCTCAGAGCCTGGATCCCAC
FY446761       --> ..................................................
FY449255       --> TGTTTGATGATAATAGATCTTCTATCTCGATCTCAGAGCCTGGATCCCAC
FD570715       --> ..................................................
EY941664       --> TGTTTGATGATAATAGATCTTCTATCTCAATCTCAGAGCCTGGATCCCAC
FD949442       --> TGTTTGATGATAATAGATCTTCTATCTCAATCTCAGAGCCTGGATCCCAC
EW726297       --> TGTTTGATGATAATAGATCTTCTATCTCAATCTCAGAGCCTGGATCCCAC

               845    -    895
UN13642        --> ACCGGACGAACTCGGGTTGATGGAAAAGAGTTCTTCCGACAAGTCAGGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY937343       <-- ACCGGACGAACTCGGGTTGATGGAAAAGAGTTCTTCCGACAAGTCAGGAG
FD574671       <-- ACCGGACGAACTCGGGTTGATGGAAAAGAGTTCTTCCGACAAGTCAGGAG
EY937194       <-- ACCGGACGAACTCGGGTTGATGGAAAAGAGTTCTTCCGACAAGTCAAGAG
FD945096       <-- ACCGGACGAACTCGGGTTGATGGAAAAGAGTTCTTCCGACAAGTCAGGAG
FD575695       <-- ..................................................
EW716328       --> ..................................................
FD534956       --> ..................................................
FY437137       --> ..................................................
EY941847       --> ..................................................
EX765299       --> ..................................................
EY904751       --> ..................................................
EX773255       --> ..................................................
FD571953       --> ..................................................
EY912830       --> ACCGGACG..........................................
FD543898       --> ..................................................
EX762053       --> ..................................................
FD989734       --> ..................................................
FY453706       --> ACCGGACGAACTCGGGTTGATGGAAAAGAGTTCTTCCGACAAGTCAGGAG
FY439237       --> ACCGGACGAACTCGGGTTGATGGAAAAGAGTTCTTCCGACAAGTCAGGAG
FY446761       --> ..................................................
FY449255       --> ACCGGACGAACTCGGGTTGATGGAAAAGAGTTCTTCCGA...........
FD570715       --> ..................................................
EY941664       --> ACCGGACGAACTCGGGTTGATGGAAAAGAGTTCTTCCGACAAGTCAAGAG
FD949442       --> ACCGGACGAACTCGGGTTGATGGAAAAGAGTTCTTCCGACAAGTCAGGAG
EW726297       --> ACCGGACGAACTCGGGTTGATGGAAAAGAGTTCTTCCGACAAGTCAGGAG

               895    -    945
UN13642        --> CCGGTTATCTTACGAGCAGTTTGGTGCATTCCTTGGAAATGTGAAGGATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY937343       <-- CCGGTTATCTTACGAGCAGTTTGGTGCATTCCTTGGAAATGTGAAGGATC
FD574671       <-- CCGGTTATCTTACGAGCAGTTTGGTGCATTCCTTGGAAATGTGAAGGATC
EY937194       <-- CCGGTTATCTTACGAGCAGTTTGGTGCATTCCTTGGAAATGTGAAGGATC
FD945096       <-- CCGGTTATCTTACGAGCAGTTTGGTGCATTCCTTGGAAATGTGAAGGATC
FD575695       <-- .........TTACGAGCAGTTTGGTGCATTCCTTGGAAATGTGAAGGATC
EW716328       --> ..................................................
FD534956       --> ..................................................
FY437137       --> ..................................................
EY941847       --> ..................................................
EX765299       --> ..................................................
EY904751       --> ..................................................
EX773255       --> ..................................................
FD571953       --> ..................................................
EY912830       --> ..................................................
FD543898       --> ..................................................
EX762053       --> ..................................................
FD989734       --> ..................................................
FY453706       --> CCGGTTATCTTACGAGCAGTTTGGTGCATT....................
FY439237       --> CCGGTTATCTTACGAGC.................................
FY446761       --> ..................................................
FY449255       --> ..................................................
FD570715       --> ..................................................
EY941664       --> CCGGTTATCTTACGAGCAGTTTGGTGCATTCCTTGGAAATGTGAAGGATC
FD949442       --> CCGGTTATCTTACGAGCAGTTTGGTGCATTCCTTGGAAATGTGAAGGATC
EW726297       --> CCGGTTATCTTACGAGCAGTTTGGTGCATTCCTTGGAAATGTGAAGGATC

               945    -    995
UN13642        --> TTAACGCCCACAAGCAAACAAAAGATGAAACGCTTAGGAAAGCTGAAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY937343       <-- TTAACGCCCACAAGCAAACAAAAGATGAAACGCTTAGGAAAGCTGAAGAG
FD574671       <-- TTAACGCCCACAAGCAAACAAAAGATGAAACGCTTAGGAAAGCTGAAGAG
EY937194       <-- TTAACGCCCACAAGCAAACAAAAGATGAAACGCTTAGGAAAGCTGAAGAG
FD945096       <-- TTAACGCCCACAAGCAAACAAAAGATGAAACGCTTAGGAAAGCTGAAGAG
FD575695       <-- TTAACGCCCACAAGCAAACAAAAGATGAAACGCTTAGGAAAGCTGAAGAG
EW716328       --> ..................................................
FD534956       --> ..................................................
FY437137       --> ..................................................
EY941847       --> ..................................................
EX765299       --> ..................................................
EY904751       --> ..................................................
EX773255       --> ..................................................
FD571953       --> ..................................................
EY912830       --> ..................................................
FD543898       --> ..................................................
EX762053       --> ..................................................
FD989734       --> ..................................................
FY453706       --> ..................................................
FY439237       --> ..................................................
FY446761       --> ..................................................
FY449255       --> ..................................................
FD570715       --> ..................................................
EY941664       --> TTAACGCCCACAAGCAAACAAAAGATGAAACGCTTAGGAAAGCTGAAGAG
FD949442       --> TTAACGCCCACAAGCAAACAAAAGATGAAACGCTTAGGAAAGCTGAAGAG
EW726297       --> TTAACGCCCACAAGCAAACAAAAGATGAAACGCTTAGGAAAGCTGAAGAG

               995    -   1045
UN13642        --> ATATTCGGAAGCGACAACAGAGATCTCTATGTCATATTCGAGGGCTTGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY937343       <-- ATATTCGGAAGCGACAACAGAGATCTCTATGTCATATTCGAGGGCTTGAT
FD574671       <-- ATATTCGGAAGCGACAACAGAGATCTTTATGTCATATTCGAGGGCTTGAT
EY937194       <-- ATATTCGGAAGCGACAACAGAGATCTCTATGTCATATTCGAGGGCTCGAT
FD945096       <-- ATATTCGGAAGCGACAACAGAGATCTCTATGTCATATTCGAGGGCTTGAT
FD575695       <-- ATATTCGGAAGCGACAACAGAGATCTTTATGTCATATTCGAGGGCTTGAT
EW716328       --> ..................................................
FD534956       --> ..................................................
FY437137       --> ..................................................
EY941847       --> ..................................................
EX765299       --> ..................................................
EY904751       --> ..................................................
EX773255       --> ..................................................
FD571953       --> ..................................................
EY912830       --> ..................................................
FD543898       --> ..................................................
EX762053       --> ..................................................
FD989734       --> ..................................................
FY453706       --> ..................................................
FY439237       --> ..................................................
FY446761       --> ..................................................
FY449255       --> ..................................................
FD570715       --> ..................................................
EY941664       --> ATATTCGGAAGCGACAACAGAGATCTCTATGTCATATTCGAGGGCTCGAT
FD949442       --> ATATTCGGAAGCGACAACAGAGATCTCTATGTCATATTCGAGGGCTTGAT
EW726297       --> ATATTCGGAAGCGACAACAGAGATCTCTATGTCATATTCGAGGGCTTGAT

               1045   -   1095
UN13642        --> CACTCGCAACGCTCACTGAGAATTTGCATTCTTGTGTTATGCACGTTAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY937343       <-- CACTCGCAACGCTCACTGAGAATTTGCATTCTTGTGTTATGCACGTTAAA
FD574671       <-- CACTCGCAACGCTCACTGAGAATTTGCATTCTCGTGTTATGCACGTTAAA
EY937194       <-- CACTCGCAACGCTCACTGAGAATTTGCATTCTTGTGTTACGCACGTTAAA
FD945096       <-- CACTCGCAACGCTCACTGAGAATTTGCATTCTTGTGTTATGCACGTTAAA
FD575695       <-- CACTCGCAACGCTCACTGAGAATTTGCATTCTTGTGTTATGCACGTTAAA
EW716328       --> ..................................................
FD534956       --> ..................................................
FY437137       --> ..................................................
EY941847       --> ..................................................
EX765299       --> ..................................................
EY904751       --> ..................................................
EX773255       --> ..................................................
FD571953       --> ..................................................
EY912830       --> ..................................................
FD543898       --> ..................................................
EX762053       --> ..................................................
FD989734       --> ..................................................
FY453706       --> ..................................................
FY439237       --> ..................................................
FY446761       --> ..................................................
FY449255       --> ..................................................
FD570715       --> ..................................................
EY941664       --> CACTCGCAACGCTCACTGAGAATTTGCATTCTTGTGTTACGCACGTTAAA
FD949442       --> CACTCGCAACGCTCACTGAGAATTTGCATTCTTGTGTTATGCACGTTAAA
EW726297       --> CACTCGCAACGCTCACTGAGAATTTGCATTCTTGTGTTATGCACGTTAAA

               1095   -   1145
UN13642        --> AGTTATATACTCGGAACTCTTCAGACTCAAATTTCTTTCGTTTTCTTGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY937343       <-- AGTTATATACTCGGAACTCTTCAGACTCAAATTTCTTTCGTTTTCTTGGC
FD574671       <-- AGTTATATACTCGGAACTCTTCAGACTCAAATTTCTTTCGTTTTCTTGGC
EY937194       <-- AGTTATATACTCGGAACTCTTCAGACTCAAATTTCTTTCGTTTTCTTGGC
FD945096       <-- AGTTATATACTCGGAACTCTTCAGACTCAAATTTCTTTCGTTTTCTTGGC
FD575695       <-- AGTTATATACTCGGAACTCTTCAGACTCAAATTTCTTTCGTTTTTTTGGC
EW716328       --> ..................................................
FD534956       --> ..................................................
FY437137       --> ..................................................
EY941847       --> ..................................................
EX765299       --> ..................................................
EY904751       --> ..................................................
EX773255       --> ..................................................
FD571953       --> ..................................................
EY912830       --> ..................................................
FD543898       --> ..................................................
EX762053       --> ..................................................
FD989734       --> ..................................................
FY453706       --> ..................................................
FY439237       --> ..................................................
FY446761       --> ..................................................
FY449255       --> ..................................................
FD570715       --> ..................................................
EY941664       --> AGTTATATACTCGGAACTCTTCAGACTCAAATTTCTTTCGTTTTCTTGGC
FD949442       --> AGTTATATACTCGGAACTCTTCAGACTCAAATTTCTTTCGTTTTCTTGGC
EW726297       --> AGTTATATACTCGGAACTCTTCAGACTCAAATTTCTTTCGTTTTCTTGGC

               1145   -   1195
UN13642        --> TGTCAAGTAAGACCAAGTGAACCGACAATTTGTTTTGTATCACCTGTTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY937343       <-- TGTCAAGTAAGACCAAGTGAACCGACAATTTGTTTTGTATCACCTGTTCA
FD574671       <-- TGTCAAGTAAGACCAAGTGAACCGACAATTTGTTTTGTATCACCTGTTCA
EY937194       <-- TGTCAAGTAAGACCAAGTGAACCGACAATTTGTTTTGTATCACCTGTTCA
FD945096       <-- TGTCAAGTAAGACCAAGTGAACCGACAATTTGTTTTGTATCACCTGTTCA
FD575695       <-- TGTCAAGTAAGACCAAGTGAACCGACAATTTGTTTTGTATCACCTGTTCA
EW716328       --> ..................................................
FD534956       --> ..................................................
FY437137       --> ..................................................
EY941847       --> ..................................................
EX765299       --> ..................................................
EY904751       --> ..................................................
EX773255       --> ..................................................
FD571953       --> ..................................................
EY912830       --> ..................................................
FD543898       --> ..................................................
EX762053       --> ..................................................
FD989734       --> ..................................................
FY453706       --> ..................................................
FY439237       --> ..................................................
FY446761       --> ..................................................
FY449255       --> ..................................................
FD570715       --> ..................................................
EY941664       --> TGTCAAGTAAGACCAAGTGAACCGACAATTTGTTTTGTATCACCTGTTCA
FD949442       --> TGTCAAGTAAGACCAAGTGAACCGACAATTTGTTTTGTATCACCTGTTCA
EW726297       --> TGTCAAGTAAGACCAAGTGAACCGACAATTTGTTTTGTATCACCTGTTCA

               1195   -   1245
UN13642        --> TGTCGTGTATTTATATCTTTCTCACATCTTCAATAAAACTACATTTCGT.
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY937343       <-- TGTCGTGTATTTATATCTTTCTCACATCTTCAATAAAACTACATTTCGTc
FD574671       <-- TGTCGTGTATTTATATCTTTCCCACATCTTCAATAAAACTACATTTCacc
EY937194       <-- TGTCGTGT..........................................
FD945096       <-- TGTCGTGTATTTATATCTTTCTCACATCTTCAgc................
FD575695       <-- TGTCGTGTATTTATATCTTTCTCACATCTTCAATAAAACTACATTTCGTt
EW716328       --> ..................................................
FD534956       --> ..................................................
FY437137       --> ..................................................
EY941847       --> ..................................................
EX765299       --> ..................................................
EY904751       --> ..................................................
EX773255       --> ..................................................
FD571953       --> ..................................................
EY912830       --> ..................................................
FD543898       --> ..................................................
EX762053       --> ..................................................
FD989734       --> ..................................................
FY453706       --> ..................................................
FY439237       --> ..................................................
FY446761       --> ..................................................
FY449255       --> ..................................................
FD570715       --> ..................................................
EY941664       --> TGTCGTGT..........................................
FD949442       --> TGTCGTGTATTTATATCTTTCTCACATCTTCAgc................
EW726297       --> TGTCGTGTATTTATATCTTTCTCACATCTTCAATAAAACTACATTTCGTc

               1245   -   1295
UN13642        --> .....
                   ~~~~~
EY937343       <-- ag...
FD574671       <-- .....
EY937194       <-- .....
FD945096       <-- .....
FD575695       <-- t....
EW716328       --> .....
FD534956       --> .....
FY437137       --> .....
EY941847       --> .....
EX765299       --> .....
EY904751       --> .....
EX773255       --> .....
FD571953       --> .....
EY912830       --> .....
FD543898       --> .....
EX762053       --> .....
FD989734       --> .....
FY453706       --> .....
FY439237       --> .....
FY446761       --> .....
FY449255       --> .....
FD570715       --> .....
EY941664       --> .....
FD949442       --> .....
EW726297       --> aactt