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Alignment for radish unigene UN13644

               1      -     51
UN13644        --> TTTTTTTTTAAATTAAAACTCTCAATTTCACTATATTCCCTAAAAAAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX777427       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX752978       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX775903       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX777690       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX890875       <-- ..................................................  Raphanus sativus var. oleiformis
EX892130       <-- ..................................................  Raphanus sativus var. oleiformis
FD573659       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY919281       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD537289       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD974810       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY919729       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX771818       --> TTTTTTTTTAAATTAAAACTCTCAATTTCACTATATTCCCTAAAAAAAA-  Raphanus raphanistrum subsp. landra
EX773892       --> TTTTTTTTTAAATTAAAACTCTCAATTTCACTATATTCCCTAAAAAAAA-  Raphanus raphanistrum subsp. landra
FD540872       --> TTTTTTTTTAAATTAAAACTCTCAATTTCACTATATTCCCTAAAAAAAA-  Raphanus raphanistrum subsp. raphanistrum (MS)
FD549519       --> TTTTTTTTTAAATTAAAACTCTCAATTTCACTATATTCCCTAAAAAAAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD978599       --> ..TTTTTTTAAATTAAAACTCTCAATTTCACTATATTCCCTAAAAAAAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV526121       --> .........AAATTAAAACTCTCAATTTCACTATATTCCCTAAAAAAAA-  Raphanus raphanistrum subsp. maritimus
EX886505       --> .........AAATTAAAACTCTCAATTTCACTATATTCCCTAAAAAAAA-  Raphanus sativus var. oleiformis
EY923487       --> .........AAATTAAAACTCTCAATTTCACTATAT-CCCTAAAAAAAA-  Raphanus raphanistrum subsp. landra
EY924007       --> .........AAATTAAAACTCTCAATTTCACTATAT-CCCTAAAAAAAA-  Raphanus raphanistrum subsp. landra
FD558333       --> .........AAATTAAAACTCTCAATTTCACTATATTCCCTAAAAAAAA-  Raphanus raphanistrum subsp. landra
FD569448       --> .........AAATTAAAGCTCTCAATTTCACTATATTCCCTAAAAAAAA-  Raphanus sativus cv Early Scarlet Globe
FD979043       --> .........AAATTAAAACTCTCAATTTCACTATATTCCCTAAAAAAAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FY428959       --> ..........AATTAAAACTCTCA-TTTCACTATATTCCCTAAAAAAAAA  Raphanus sativus cv GSK3-1
EX773616       --> ...........aaTAAAACTCTCAATCTCACTATATTCCCTAAAAAAAA-  Raphanus raphanistrum subsp. landra
FY430957       --> ............attAAACTCTCA-TTTCACTATATTCCCTAAAAAAAAA  Raphanus sativus cv GSK3-1
FY435009       --> ............attAAACTCTCA-TTTCACTATATTCCCTAAAAAAAAA  Raphanus sativus cv GSK3-1
FY437853       --> ............attAAACTCTCA-TTTCACTATATTCCCTAAAAAAAAA  Raphanus sativus cv GSK3-1
FY432066       --> .........................TTTCACTATATTCCCTAAAAAAAAA  Raphanus sativus cv GSK3-1
FY430941       --> .................................TATTCCCTAAAAAAAAA  Raphanus sativus cv GSK3-1
FY439708       --> .....................................CCCTAAAAAAAAA  Raphanus sativus cv GSK3-1
EX765517       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX888132       --> ..................................................  Raphanus sativus var. oleiformis
EX749233       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               51     -    101
UN13644        --> --GAATTCATATTTGCTTTTCTAGAACTCAAATTATTTTCAAGTTCTCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX777427       <-- ................TTTTCTAGAACTCAAATTATTTTCAAGTTCTCTG
EX752978       <-- ....................CTAGAACTCAAATTATTTTCAAGTTCTCTG
EX775903       <-- ....................CTAGAACTCAAATTATTTTCAAGTTCTCTG
EX777690       <-- ....................CTAGAACTCAAATTATTTTCAAGTTCTCTG
EX890875       <-- ....................CTAGAACTCAAATTATTTTCAAGTTCTCTG
EX892130       <-- ..................................................
FD573659       <-- ..................................................
EY919281       <-- ..................................................
FD537289       <-- ..................................................
FD974810       <-- ..................................................
EY919729       <-- ..................................................
EX771818       --> --GAATTCATATTTGCTTTTCTAGAACTCAAATTATTTTCAAGTTCTCTG
EX773892       --> --GAATTCATATTTGCTTTTCTAGAACTCAAATTATTTTCAAGTTCTCTG
FD540872       --> --GAATTCATATTTGCTTTTCTAGAACTCAAATTATTTTCAAGTT-----
FD549519       --> -AGAATTCATATTTGCTTTTCTAGAACTCAAATTATTTTCAAGTTCTCTG
FD978599       --> --GAATTCATATTTGCTTTTCTAGAACTCAAATTATTTTCAAGTTCTCTG
EV526121       --> --GAATTCATATTTGCTTTTCTAGAACTCAAATTATTTTCAAGTTCTCTG
EX886505       --> --GAATTCATATTTGCTTTTCTAGAACTCAAATTATTTTCAAGTTCTCTG
EY923487       --> --GAATTCATATTTGCTTTTCTAGAACTCAAATTATTTTCAAGTTCTCTG
EY924007       --> --GAATTCATATTTGCTTTTCTAGAACTCAAATTATTTTCAAGTTCTCTG
FD558333       --> --GAATTCATATTTGCTTTTCTAGAACTCAAATTATTTTCAAGTTCTCTG
FD569448       --> --GAATTCATATTTGCTTTTCTAGAACTCAAATTATTTTCAAGTTCTCTG
FD979043       --> AAGAATTCATATTTGCTTTTCTAGAACTCAAATTATTTTCAAGTTCTCTG
FY428959       --> --AGAATCATATTTGCTTTTCTAGAACTCAAATTATTTTCAAGTTCTCTG
EX773616       --> --GAATTCATATTTGCTTTTCTAGAACTCAAATTATTTTCAAGTTCTCTG
FY430957       --> --GAATTCATATTTGCTTTTCTAGAACTCAAATTATTTTCAAGTTCTCTG
FY435009       --> -AGAATTCATATTTGCTTTTCTAGAACTCAAATTATTTTCAAGTTCTCTG
FY437853       --> AAGAATTCATATTTGCTTTTCTAGAACTCAAATTATTTTCAAGTTCTCTG
FY432066       --> -AGAATTCATATTTGCTTTTCTAGAACTCAAATTATTTTCAAGTTCTCTG
FY430941       --> -AGAATTCATATTTGCTTTTCTAGAACTCAAATTATTTTCAAGTTCTCTG
FY439708       --> -AGAATTCATATTTGCTTTTCTAGAACTCAAATTATTTTCAAGTTCTCTG
EX765517       --> .......gATATTTGCTTTTCTAGAACTCAAATTATTTTCAAGTTCTCTG
EX888132       --> ..................................................
EX749233       --> ..................................................

               101    -    151
UN13644        --> TTTGATTATCGAGAAACATGACTATTGCTTTAACGATCGGAGGAA-GTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX777427       <-- TTTGATTATCGAGAAACATGACTATTGCTTTAACGATCGGAGGAAAGTGG  Raphanus raphanistrum subsp. landra
EX752978       <-- TTTGAT-ATCGAGAAACATGACTATTGCTTTAACGATCGGAGGAA-GTGG  Raphanus raphanistrum subsp. maritimus
EX775903       <-- TTTGATTATCGAGAAACATGACTATTGCTTTAACGATCGGAGGAA-GTGG  Raphanus raphanistrum subsp. landra
EX777690       <-- TTTGATTATCGAGAAACATGACTATTGCTTTAACGATCGGAGGAA-GTGG  Raphanus raphanistrum subsp. landra
EX890875       <-- TTTGATTATCGAGAAACATGACTATTGCTTTAACGATCGGAGGAA-GTGG  Raphanus sativus var. oleiformis
EX892130       <-- ........gCGAGAAACATGACTATTGCTTTAACGATCGGAGGAA-GTGG  Raphanus sativus var. oleiformis
FD573659       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY919281       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD537289       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD974810       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY919729       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX771818       --> TTTGATTATCGAGAAACATGACTATTGCTTTAACGATCGGAGGAA-GTGG  Raphanus raphanistrum subsp. landra
EX773892       --> TTTGATTATCGAGAAACATGACTATTGCTTTAACGATCGGAGGAA-GTGG  Raphanus raphanistrum subsp. landra
FD540872       --> -TTGATTATCGAGAAACATGACTATTGCTTTAACGATCGGAGGAA-GCGG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD549519       --> TTTGATTATCGAGAAACATGACTATTGCTTTAACGATCGGAGGAA-GCGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD978599       --> TTTGATTATCGAGAAACATGACTATTGCTTTAACGATCGGAGGAA-GCGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV526121       --> TTTGATTATCGAGAAACATGACTATTGCTTTAACGATCGGAGGAA-GTGG  Raphanus raphanistrum subsp. maritimus
EX886505       --> TTTGATTATCGAGAAACATGACTATTGCTTTAACGATCGGAGGAA-GTGG  Raphanus sativus var. oleiformis
EY923487       --> TTTGATTATCGAGAAACACGACTATTGCTTTAACGATCGGAGGAA-GTGG  Raphanus raphanistrum subsp. landra
EY924007       --> TTTGATTATCGAGAAACACGACTATTGCTTTAACGATCGGAGGAA-GTGG  Raphanus raphanistrum subsp. landra
FD558333       --> TTTGATTATCGAGAAACATGACTATTGCTTTAACGATCGGAGGAA-GTGG  Raphanus raphanistrum subsp. landra
FD569448       --> TTTGATTATCGAGAAACATGACTATTGCTTTAACGATCGGAGGAA-GTGG  Raphanus sativus cv Early Scarlet Globe
FD979043       --> TTTGATTATCGAGAAACATGACTATTGCTTTAACGATCGGAGGAA-GCGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FY428959       --> TTTGATTATCGAGAAACATGACTATTGCTTTAACGATCGGAGGAA-GCGG  Raphanus sativus cv GSK3-1
EX773616       --> TTTGATTATCGAGAAACATGACTATTGCTTTAACGATCGGAGGAA-GTGG  Raphanus raphanistrum subsp. landra
FY430957       --> TTTGATTATCGAGAAACATGACTATTGCTTTAACGATCGGAGGAA-GCGG  Raphanus sativus cv GSK3-1
FY435009       --> TTTGATTATCGAGAAACATGACTATTGCTTTAACGATCGGAGGAA-GCGG  Raphanus sativus cv GSK3-1
FY437853       --> TTTGATTATCGAGAAACATGACTATTGCTTTAACGATCGGAGGAA-GCGG  Raphanus sativus cv GSK3-1
FY432066       --> TTTGATTATCGAGAAACATGACTATTGCTTTAACGATCGGAGGAA-GCGG  Raphanus sativus cv GSK3-1
FY430941       --> TTTGATTATCGAGAAACATGACTATTGCTTTAACGATCGGAGGAA-GCGG  Raphanus sativus cv GSK3-1
FY439708       --> TTTGATTATCGAGAAACATGACTATTGCTTTAACGATCGGAGGAA-GCGG  Raphanus sativus cv GSK3-1
EX765517       --> TTTGATTATCGAGAAACATGACTATTGCTTTAACGATCGGAGGAA-GCGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX888132       --> ........gCGAGAAACATGACTATTGCTTTAACGATCGGAGGAA-GTGG  Raphanus sativus var. oleiformis
EX749233       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               151    -    201
UN13644        --> GTTCTCTGGTCTACCC-GGATCTTCGTTTTCCTCATCTTCTTCATCGCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX777427       <-- GTTCTCTGGTCTACCCCGGATCTTCGTTTTCCTCATCTTCTTCATCGCTC
EX752978       <-- GTTCTCTGGTCTACCC-GGATCTTCGTTTTCCTCATCTTCTTCATCGCTC
EX775903       <-- GTTCTCTGGTCTACCC-GGATCTTCGTTTTCCTCATCTTCTTCATCGCTC
EX777690       <-- GTTCTCTGGTCTACCC-GGATCTTCGTTTTCCTCATCT--TTCATCGCTC
EX890875       <-- GTTCTCTGGTCTACCC-GGATCTTCGTTTTCCTCATCTTCTTCATCGCTC
EX892130       <-- GTTCTCTGGTCTACCC-GGATCTTCGTTTTCCTCATCTTCTTCATCGCTC
FD573659       <-- ....TCTGGTCTACCC-GGATCTTCGTTTTCCTCATCTTCTTCATCGCTC
EY919281       <-- ......................TTCGTTTTCCTCATCTTCTTCATCGCTC
FD537289       <-- .........................GTTTTCCTCATCTTCTTCATCGCTC
FD974810       <-- ...................................TCTTCTTCATCGCTC
EY919729       <-- .....................................TTCTTCATCGCTC
EX771818       --> GTTCTCTGGTCTACCC-GGATCTTCGTTTTCCTCATCTTCTTCATCGCTC
EX773892       --> GTTCTCTGGTCTACCC-GGATCTTCGTTTTCCTCATCTT--TCATCGCTC
FD540872       --> GTTCTCTGGTCTACCC-GGATCTTCGTTTTCCTCATCTTCTTCATCGCTC
FD549519       --> GTTCTCTGGTCTACCC-GGATCTTCGTTTTCCTCATCTTCTTCATCGCTC
FD978599       --> GTTCTCTGGTCTACCC-GGATCTTCGTTTTCCTCATCTTCTTCATCGCTC
EV526121       --> GTTCTCTGGTCTACCC-GGATCTTCGTTTTCCTCATCTTCTTCATCGCTC
EX886505       --> GTTCTCTGGTCTACCC-GGATCTTCGTTTTCCTCATCTTCTTCATCGCTC
EY923487       --> GTTCTCTGGTCTACCC-GGATCTTCGTTTTCCTCATCTTCTTCATCGCTC
EY924007       --> GTTCTCTGGTCTACCC-GGATCTTCGTTTTCCTCATCTTCTTCATCGCTC
FD558333       --> GTTCTCTGGTCTACCC-GGATCTTCGTTTTCCTCATCTTCTTCATCGCTC
FD569448       --> GTTCTCTGGTCTACCC-GGATCTTCGTTTTCCTCATCTTCTTCATCGCTC
FD979043       --> GTTCTCTGGTCTACCC-GGATCTTCGTTTTCCTCATCTTCTTCATCGCTC
FY428959       --> GTTCTCTGGTCTACCC-GGATCTTCGTTTTCCTCATCTTCTTCATCGCTC
EX773616       --> GTTCTCTGGTCTACCC-GGATCTTCGTTTTCCTCATCTTCTTCATCGCTC
FY430957       --> GTTCTCTGGTCTACCC-GGATCTTCGTTTTCCTCATCTTCTTCATCGCTC
FY435009       --> GTTCTCTGGTCTACCC-GGATCTTCGTTTTCCTCATCTTCTTCATCGCTC
FY437853       --> GTTCTCTGGTCTACCC-GGATCTTCGTTTTCCTCATCTTCTTCATCGCTC
FY432066       --> GTTCTCTGGTCTACCC-GGATCTTCGTTTTCCTCATCTTCTTCATCGCTC
FY430941       --> GTTCTCTGGTCTACCC-GGATCTTCGTTTTCCTCATCTTCTTCATCGCTC
FY439708       --> GTTCTCTGGTCTACCC-GGATCTTCGTTTTCCTCATCTTCTTCATCGCTC
EX765517       --> GTTCTCTGGTCTACCC-GGATCTTCGTTTTCCTCATCTTCTTCATCGCTC
EX888132       --> GTTCTCTGGTCTACCC-GGATCTTCGTTTTCCTCATCTTCTTCATCGCTC
EX749233       --> ....TCTGGTCTACCC-GGATCTTCGTTTTCCTCATCTTCTTCATCGCTC

               201    -    251
UN13644        --> CGATTGAAGAACAGCAGACGAAAGGACACGAAGATGCTGAACAGGAAAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX777427       <-- CGATTGAAGAACAGCAGACGAAAGGACACGAAGATGCTGAACAGGAAAGG
EX752978       <-- CGATTGAAGAACAGCAGACGAAAGGACACGAAGATGCTGAACAGGAAAGG
EX775903       <-- CGATTGAAGAACAGCAGACGAAAGGACACGAAGATGCTGAACAGGAAAGG
EX777690       <-- CGATTGAAGAACAGCAGACGAAAGGACACGAAGATGCTGAACAGGAAAGG
EX890875       <-- CGATTGAAGAACAGCAGACGAAAGGACACGAAGATGCTGAACAGGAAAGG
EX892130       <-- CGATTGAAGAACAGCAGACGAAAGGACACGAAGATGCTGAACAGGAAAGG
FD573659       <-- CGATTGAAGAACAGCAGACGAAAGGACACGAAGATGCTGAACAGGAAAGG
EY919281       <-- CGATTGAAGAACAGCAGACGAAAGGACACGAAGATGCTGAACAGGAAAGG
FD537289       <-- CGATTGAAGAACAGCAGACGAAAGGACACGAAGATGCTGAACAGGAAAGG
FD974810       <-- CGATTGAAGAACAGCAGACGAAAGGACACGAAGATGCTGAACAGGAAAGG
EY919729       <-- CGATTGAAGAACAGCAGACGAAAGGACACGAAGATGCTGAACAGGAAAGG
EX771818       --> CGATTGAAGAACAGCAGACGAAAGGACACGAAGATGCTGAACAGGAAAGG
EX773892       --> CGATTGAAGAACAGCAGACGAAAGGACACGAAGATGCTGAACAGGAAAGG
FD540872       --> CGATTGAAGAACAGCAGACGAAAGGACACGAAGATGCTGAACAGGAAAGG
FD549519       --> CGATTGAAGAACAGCAGACGAAAGGACACGAAGATGCTGAACAGGAAAGG
FD978599       --> CGATTGAAGAACAGCAGACGAAAGGACACGAAGATGCTGAACAGGAAAGG
EV526121       --> CGATTGAAGAACAGCAGACGAAAGGACACGAAGATGCTGAACAGGAAAGG
EX886505       --> CGATTGAAGAACAGCAGACGAAAGGACACGAAGATGCTGAACAGGAAAGG
EY923487       --> CGATTGAAGAACAGCAGACGAAAGGACACGAAGATGCTGAACAGGAAAGG
EY924007       --> CGATTGAAGAACAGCAGACGAAAGGACACGAAGATGCTGAACAGGAAAGG
FD558333       --> CGATTGAAGAACAGCAGACGAAAGGACACGAAGATGCTGAACAGGAAAGG
FD569448       --> CGATTGAAGAACAGCAGACGAAAGGACACGAAGATGCTGAACAGGAAAGG
FD979043       --> CGATTGAAGAACAGCAGACGAAAGGACACGAAGATGCTGAACAGGAAAGG
FY428959       --> CGATTGAAGAACAGCAGACGAAAGGACACGAAGATGCTGAACAGGAAAGG
EX773616       --> CGATTGAAGAACAGCAGACGAAAGGACACGAAGATGCTGAACAGGAAAGG
FY430957       --> CGATTGAAGAACAGCAGACGAAAGGACACGAAGATGCTGAACAGGAAAGG
FY435009       --> CGATTGAAGAACAGCAGACGAAAGGACACGAAGATGCTGAACAGGAAAGG
FY437853       --> CGATTGAAGAACAGCAGACGAAAGGACACGAAGATGCTGAACAGGAAAGG
FY432066       --> CGATTGAAGAACAGCAGACGAAAGGACACGAAGATGCTGAACAGGAAAGG
FY430941       --> CGATTGAAGAACAGCAGACGAAAGGACACGAAGATGCTGAACAGGAAAGG
FY439708       --> CGATTGAAGAACAGCAGACGAAAGGACACGAAGATGCTGAACAGGAAAGG
EX765517       --> CGATTGAAGAACAG---ACGAAAGGACACGAAGATGCTGAACAGGAAAGG
EX888132       --> CGATTGAAGAACAGCAGACGAAAGGACACGAAGATGCTGAACAGGAAAGG
EX749233       --> CGATTGAAGAACAGCAGACGAAAGGACACGAAGATGCTGAACAGGAAAGG

               251    -    301
UN13644        --> AGTCATCTGTTCTTCATCTTCTGTAATGGATCCGTATAAGACCCTTAGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX777427       <-- AGTCATCTGTTCTTCATCTTCTGTAATGGATCCGTATAAGACCCTTAGGA  Raphanus raphanistrum subsp. landra
EX752978       <-- AGTCATCTGTTCTTCATCTTCTGTAATGGATCCGTATAAGACCCTTAGGA  Raphanus raphanistrum subsp. maritimus
EX775903       <-- AGTCATCTGTTCTTCATCTTCTGTAATGGATCCGTATAAGACCCTTAGGA  Raphanus raphanistrum subsp. landra
EX777690       <-- AGTCATCTGTTCTTCATCTTCTGTAATGGATCCGTATAAGACCCTTAGGA  Raphanus raphanistrum subsp. landra
EX890875       <-- AGTCATCTGTTCTTCATCTTCTGTAATGGATCCGTATAAGACCCTTAGGA  Raphanus sativus var. oleiformis
EX892130       <-- AGTCATCTGTTCTTCATCTTCTGTAATGGATCCGTATAAGACCCTTAGGA  Raphanus sativus var. oleiformis
FD573659       <-- AGTCATCTGTTCTTCATCTTCTGTAATGGATCCGTATAAGACCCTTAGGA  Raphanus sativus cv Early Scarlet Globe
EY919281       <-- AGTCATCTGTTCTTCATCTTCTGTAATGGATCCGTATAAGACCCTTAGGA  Raphanus raphanistrum subsp. landra
FD537289       <-- AGTCATCTGTTCTTCATCTTCTGTAATGGATCCGTATAAGACCCTTAGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD974810       <-- AGTCATCTGTTCTTCAACTTCTGTAATGGATCCGTATAAGACCCTTAGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY919729       <-- AGTCATCTGTTCTTCATCTTCTGTAATGGATCCGTATAAGACCCTTAGGA  Raphanus raphanistrum subsp. landra
EX771818       --> AGTCATCTGTTCTTCATCTTCTGTAATGGATCCGTATAAGACCCTTAGGA  Raphanus raphanistrum subsp. landra
EX773892       --> AGTCATCTGTTCTTCATCTTCTGTAATGGATCCGTATAAGACCCTTAGGA  Raphanus raphanistrum subsp. landra
FD540872       --> AGTCATCTGTTCTTCATCTTCTGTAATGGATCCGTATAAGACCCTTAGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD549519       --> AGTCATCTGTTCTTCAACTTCTGTAATGGATCCGTATAAGACCCTTAGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD978599       --> AGTCATCTGTTCTTCAACTTCTGTAATGGATCCGTATAAGACCCTTAGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV526121       --> AGTCATCTGTTCTTCATCTTCTGTAATGGATCCGTATAAGACCCTTAGGA  Raphanus raphanistrum subsp. maritimus
EX886505       --> AGTCATCTGTTCTTCATCTTCTGTAATGGATCCGTATAAGACCCTTAGGA  Raphanus sativus var. oleiformis
EY923487       --> AGTCATCTGTTCTTCATCTTCTGTAATGGATCCGTATAAGACCCTTAGGA  Raphanus raphanistrum subsp. landra
EY924007       --> AGTCATCTGTTCTTCATCTTCTGTAATGGATCCGTATAAGACCCTTAGGA  Raphanus raphanistrum subsp. landra
FD558333       --> AGTCATCTGTTCTTCATCTTCTCTAATGGATCCGTATAAGACCCTTAGGA  Raphanus raphanistrum subsp. landra
FD569448       --> AGTCATCTGTTCTTCATCTTCTGTAATGGATCCGTATAAGACCCTTAGGA  Raphanus sativus cv Early Scarlet Globe
FD979043       --> AGTCATCTGTTCTTCAACTTCTGTAATGGATCCGTATAAGACCCTTAGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FY428959       --> AGTCATCTGTTCTTCAACTTCTGTAATGGATCCGTATAAGACCCTTAGGA  Raphanus sativus cv GSK3-1
EX773616       --> AGTCATCTGTTCTTCATCTTCTGTAATGGATCCGTATAAGACCCTTAGGA  Raphanus raphanistrum subsp. landra
FY430957       --> AGTCATCTGTTCTTCAACTTCTGTAATGGATCCGTATAAGACCCTTAGGA  Raphanus sativus cv GSK3-1
FY435009       --> AGTCATCTGTTCTTCAACTTCTGTAATGGATCCGTATAAGACCCTTAGGA  Raphanus sativus cv GSK3-1
FY437853       --> AGTCATCTGTTCTTCAACTTCTGTAATGGATCCGTATAAGACCCTTAGGA  Raphanus sativus cv GSK3-1
FY432066       --> AGTCATCTGTTCTTCAACTTCTGTAATGGATCCGTATAAGACCCTTAGGA  Raphanus sativus cv GSK3-1
FY430941       --> AGTCATCTGTTCTTCAACTTCTGTAATGGATCCGTATAAGACCCTTAGGA  Raphanus sativus cv GSK3-1
FY439708       --> AGTCATCTGTTCTTCAACTTCTGTAATGGATCCGTATAAGACCCTTAGGA  Raphanus sativus cv GSK3-1
EX765517       --> AGTCATCTGTTCTTCATCTTCTGTAATGGATCCGTATAAGACCCTTAGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX888132       --> AGTCATCTGTTCTTCATCTTCTGTAATGGATCCGTATAAGACCCTTAGGA  Raphanus sativus var. oleiformis
EX749233       --> AGTCATCTGTTCTTCATCTTCTGTAATGGATCCGTATAAGACCCTTAGGA  Raphanus raphanistrum subsp. maritimus

               301    -    351
UN13644        --> TCCGACCCGATTCATCTGAGTACGAGGTCAAGCAAGCTTTCAGACAACTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX777427       <-- TCCGACCCGATTCATCTGAGTACGAGGTCAAGCAAGCTTTCAGACAACTC  Raphanus raphanistrum subsp. landra
EX752978       <-- TACGACCCGATTCATCTGAGTACGAGGTCAAGCAAGCTTTCAGACAACTC  Raphanus raphanistrum subsp. maritimus
EX775903       <-- TCCGACCCGATTCATCTGAGTACGAGGTCAAGCAAGCTTTCAGACAACTC  Raphanus raphanistrum subsp. landra
EX777690       <-- TCCGACCCGATTCATCTGAGTACGAGGTCAAGCAAGCTTTCAGACAACTC  Raphanus raphanistrum subsp. landra
EX890875       <-- TCCGACCCGATTCATCTGAGTACGAGGTCAAGCAAGCTTTCAGACAACTC  Raphanus sativus var. oleiformis
EX892130       <-- TCCGACCCGATTCATCTGAGTACGAGGTCAAGCAAGCTTTCAGACAACTC  Raphanus sativus var. oleiformis
FD573659       <-- TACGACCCGATTCATCTGAGTACGAGGTCAAGCAAGCTTTCAGACAACTC  Raphanus sativus cv Early Scarlet Globe
EY919281       <-- TCCGACCCGATTCATCTGAGTACGAGGTCAAGCAAGCTTTCAGACAACTC  Raphanus raphanistrum subsp. landra
FD537289       <-- TCCGACCCGACTCATCTGAGTACGAGGTCAAGCAAGCTTTCAGACAACTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD974810       <-- TCCGACCCGATTCATCTGAGTACGAGGTCAAGCAAGCTTTCAGACAACTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY919729       <-- TCCGACCCGATTCATCTGAGTACGAGGTCAAGCAAGCTTTCAGACAACTC  Raphanus raphanistrum subsp. landra
EX771818       --> TCCGACCCGATTCATCTGAGTACGAGGTCAAGCAAGCTTTCAGACAACTC  Raphanus raphanistrum subsp. landra
EX773892       --> TCCGACCCGATTCATCTGAGTACGAGGTCAAGCAAGCTTTCAGACAACTC  Raphanus raphanistrum subsp. landra
FD540872       --> TCCGACCCGACTCATCTGAGTACGAGGTCAAGCAAGCTTTCAGACAACTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD549519       --> TCCGACCCGATTCATCTGAGTACGAGGTCAAGCAAGCTTTCAGACAACTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD978599       --> TCCGACCCGATTCATCTGAGTACGAGGTCAAGCAAGCTTTCAGACAACTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV526121       --> TACGACCCGATTCATCTGAGTACGAGGTCAAGCAAGCTTTCAGACAACTC  Raphanus raphanistrum subsp. maritimus
EX886505       --> TCCGACCCGATTCATCTGAGTACGAGGTCAAGCAAGCTTTCAGACAACTC  Raphanus sativus var. oleiformis
EY923487       --> TCCGACCCGATTCATCTGAGTACGAGGTCAAGCAAGCTTTCAGACAACTC  Raphanus raphanistrum subsp. landra
EY924007       --> TCCGACCCGATTCATCTGAGTACGAGGTCAAGCAAGCTTTCAGACAACTC  Raphanus raphanistrum subsp. landra
FD558333       --> TCCGACCCGATTCATCTGAGTACGAGGTCAAGCAAGCTTTCAGACAACTC  Raphanus raphanistrum subsp. landra
FD569448       --> TACGACCCGATTCATCTGAGTACGAGGTCAAGCAAGCTTTCAGACAACTC  Raphanus sativus cv Early Scarlet Globe
FD979043       --> TCCGACCCGATTCATCTGAGTACGAGGTCAAGCAAGCTTTCAGACAACTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FY428959       --> TCCGACCCGATTCATCTGAGTACGAGGTCAAGCAAGCTTTCAGACAACTC  Raphanus sativus cv GSK3-1
EX773616       --> TCCGACCCGATTCATCTGAGTACGAGGTCAAGCAAGCTTTCAGACAACTC  Raphanus raphanistrum subsp. landra
FY430957       --> TCCGACCCGATTCATCTGAGTACGAGGTCAAGCAAGCTTTCAGACAACTC  Raphanus sativus cv GSK3-1
FY435009       --> TCCGACCCGATTCATCTGAGTACGAGGTCAAGCAAGCTTTCAGACAACTC  Raphanus sativus cv GSK3-1
FY437853       --> TCCGACCCGATTCATCTGAGTACGAGGTCAAGCAAGCTTTCAGACAACTC  Raphanus sativus cv GSK3-1
FY432066       --> TCCGACCCGATTCATCTGAGTACGAGGTCAAGCAAGCTTTCAGACAACTC  Raphanus sativus cv GSK3-1
FY430941       --> TCCGACCCGATTCATCTGAGTACGAGGTCAAGCAAGCTTTCAGACAACTC  Raphanus sativus cv GSK3-1
FY439708       --> TCCGACCCGATTCATCTGAGTACGAGGTCAAGCAAGCTTTCAGACAACTC  Raphanus sativus cv GSK3-1
EX765517       --> TCCGACCCGATTCATCTGAGTACGAGGTCAAGCAAGCTTTCAGACAACTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX888132       --> TCCGACCCGATTCATCTGAGTACGAGGTCAAGCAAGCTTTCAGACAACTC  Raphanus sativus var. oleiformis
EX749233       --> TACGACCCGATTCATCTGAGTACGAGGTCAAGCAAGCTTTCAGACAACT.  Raphanus raphanistrum subsp. maritimus

               351    -    401
UN13644        --> GCCAAAAAGTATCATCCTGATGTTTGCAGAGGAAGCAACTGTGGAGTGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX777427       <-- GTCAAAAAGTATCATCCTGATGTTTGCAGAGGAAGCAACTGTGGAGTGTA
EX752978       <-- GCCAAAAAGTATCATCCTGATGTTTGCAGAGGAAGCAACTGTGGAGTGCA
EX775903       <-- GTCAAAAAGTATCATCCTGATGTTTGCAGAGGAAGCAACTGTGGAGTGTA
EX777690       <-- GCCAAAAAGTATCATCCTGATGTTTGCAGAGGAAGCAACTGTGGAGTGCA
EX890875       <-- GCCAAAAAGTATCATCCTGATGTTTGCAGAGGAAGCAACTGTGGAGTGCG
EX892130       <-- GCCAAAAAGTATCATCCTGATGTTTGCAGAGGAAGCAACTGTGGAGTGCA
FD573659       <-- GCCAAAAAGTATCATCCTGATGTTTGCAGAGGAAGCAACTGTGGAGTGCA
EY919281       <-- GCCAAAAAGTATCATCCTGATGTTTGCAGAGGAAGCAACTGTGGAGTGCA
FD537289       <-- GCCAAAAAGTATCATCCTGATGTTTGCAGAGGAAGCAACTGTGGAGTGCA
FD974810       <-- GCCAAAAAGTATCATCCTGATGTTTGCAGAGGAAGCAACTGTGGAGTGCA
EY919729       <-- GCCAAAAAGTATCATCCTGATGTTTGCAGAGGAAGCAACTGTGGAGTGCA
EX771818       --> GTCAAAAAGTATCATCCTGATGTTTGCAGAGGAAGCAACTGTGGAGTGTA
EX773892       --> GCCAAAAAGTATCATCCTGATGTTTGCAGAGGAAGCAACTGTGGAGTGCA
FD540872       --> GCCAAAAAGTATCATCCTGATGTTTGCAGAGGAAGCAACTGTGGAGTGCA
FD549519       --> GCCAAAAAGTATCATCCTGATGTTTGCAGAGGAAGCAACTGTGGAGTGCA
FD978599       --> GCCAAAAAGTATCATCCTGATGTTTGCAGAGGAAGCAACTGTGGAGTGCA
EV526121       --> GCCAAAAAGTATCATCCTGATGTTTGCAGAGGAAGCAACTGTGGAGTGCA
EX886505       --> GCCAAAAAGTATCATCCTGATGTTTGCAGAGGAAGCAACTGTGGAGTGCG
EY923487       --> GCCAAAAAGTATCATCCTGATGTTTGCAGAGGAAGCAACTGTGGAGTGCA
EY924007       --> GCCAAAAAGTATCATCCTGATGTTTGCAGAGGAAGCAACTGTGGAGTGCA
FD558333       --> GCCAAAAAGTATCATCCTGATGTTTGCAGAGGAAGCAACTGTGGAGTGCA
FD569448       --> GCCAAAAAGTATCATCCTGATGTTTGCAGAGGAAGCAACTGTGGAGTGCA
FD979043       --> GCCAAAAAGTATCATCCTGATGTTTGCAGAGGAAGCAACTGTGGAGTGCA
FY428959       --> GCCAAAAAGTATCATCCTGATGTTTGCAGAGGAAGCAACTGTGGAGTGCA
EX773616       --> GTCAAAAAGTATCATCCTGATGTTTGCAGAGGAAGCAACTGTGGAGTGTA
FY430957       --> GCCAAAAAGTATCATCCTGATGTTTGCAGAGGAAGCAACTGTGGAGTGCA
FY435009       --> GCCAAAAAGTATCATCCTGATGTTTGCAGAGGAAGCAACTGTGGAGTGCA
FY437853       --> GCCAAAAAGTATCATCCTGATGTTTGCAGAGGAAGCAACTGTGGAGTGCA
FY432066       --> GCCAAAAAGTATCATCCTGATGTTTGCAGAGGAAGCAACTGTGGAGTGCA
FY430941       --> GCCAAAAAGTATCATCCTGATGTTTGCAGAGGAAGCAACTGTGGAGTGCA
FY439708       --> GCCAAAAAGTATCATCCTGATGTTTGCAGAGGAAGCAACTGTGGAGTGCA
EX765517       --> GCCAAAAAGTATCATCCTGATGTTTGCAGAGGAAGCAACTGTGGAGTGCA
EX888132       --> GCCAAAAAGTATCATCCTGATGTTTGCAGAGGAAGCAACTGTGGAGTGCA
EX749233       --> ..................................................

               401    -    451
UN13644        --> GTTTCAGACAATCAACGAAGCTTACGATATTGTGTTGAAGCAAATAAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX777427       <-- GTTTCAGACAATCAACGAAGCTTACGATATTGTGTTGAAGCAAATAAAGA
EX752978       <-- GTTTCAGACAATCAACGAAGCTTACGATATTGTGTTGAAGCAAATAAAGA
EX775903       <-- GTTTCAGACAATCAACGAAGCTTACGATATTGTGTTGAAGCAAATAAAGA
EX777690       <-- GTTTCAGACAATCAACGAAGCTTACGATATTGTGTTGAAGCAAATAAAGA
EX890875       <-- GTTTCAGACAATCAACGAAGCTTACGATATTGTGTTGAAGCAAATAAAGA
EX892130       <-- GTTTCAGACAATCAACGAAGCTTACGATATTGTGTTGAAGCAAATAAAGA
FD573659       <-- GTTTCAGACAATCAACGAAGCTTACGATATTGTGTTGAAGCAAATAAAGA
EY919281       <-- GTTTCAGACAATCAACGAAGCTTACGATATTGTGTTGAAGCAAATAAAGA
FD537289       <-- GTTTCAGACAATCAATGAAGCTTACGATATTGTGTTGAAGCAAATAAAGA
FD974810       <-- GTTTCAGACAATCAACGAAGCTTACGATATTGTGTTGAAGCAAATAAAGA
EY919729       <-- GTTTCAGACAATCAACGAAGCTTACGATATTGTGTTGAAGCAAATAAAGA
EX771818       --> GTTTCAGACAATCAACGAAGCTTACGATATTGTGTTGAAGCAAATAAAGA
EX773892       --> GTTTCAGACAATCAACGAAGCTTACGATATTGTGTTGAAGCAAATAAAGA
FD540872       --> GTTTCAGACAATCAATGAAGCTTACGATATTGTGTTGAAGCAAATAAAGA
FD549519       --> GTTTCAGACAATCAACGAAGCTTACGATATTGTGTTGAAGCAAATAAAGA
FD978599       --> GTTTCAGACAATCAACGAAGCTTACGATATTGTGTTGAAGCAAATAAAGA
EV526121       --> GTTTCAGACAATCAACGAAGCTTACGATATTGTGTTGAAGCAAATAAAGA
EX886505       --> GTTTCAGACAATCAACGAAGCTTACGATATTGTGTTGAAGCAAATAAAGA
EY923487       --> GTTTCAGACAATCAACGAAGCTTACGATATTGTGTTGAAGCAAATAAAGA
EY924007       --> GTTTCAGACAATCAACGAAGCTTACGATATTGTGTTGAAGCAAATAAAGA
FD558333       --> GTTTCAGACAATCAACGAAGCTTACGATATTGTGTTGAAGCAAATAAAGA
FD569448       --> GTTTCAGACAATCAACGAAGCTTACGATATTGTGTTGAAGCAAATAAAGA
FD979043       --> GTTTCAGACAATCAACGAAGCTTGCGATATTGTGTTGAAGCAAATAAAGA
FY428959       --> GTTTCAGACAATCAACGAAGCTTACGATATTGTGTTGAAGCAAATAAAGA
EX773616       --> GTTTCAGACAATCAACGAAGCTTACGATATTGTGTTGAAGCAAATAAAGA
FY430957       --> GTTTCAGACAATCAACGAAGCTTACGATATTGTGTTGAAGCAAATAAAGA
FY435009       --> GTTTCAGACAATCAACGAAGCTTACGATATTGTGTTGAAGCAAATAAAGA
FY437853       --> GTTTCAGACAATCAACGAAGCTTACGATATTGTGTTGAAGCAAATAAAGA
FY432066       --> GTTTCAGACAATCAACGAAGCTTACGATATTGTGTTGAAGCAAATAAAGA
FY430941       --> GTTTCAGACAATCAACGAAGCTTACGATATTGTGTTGAAGCAAATAAAGA
FY439708       --> GTTTCAGACAATCAACGAAGCTTACGATATTGTGTTGAAGCAAATAAAGA
EX765517       --> GTTTCCGACAATCAACGAAGCTTACGATATTGTGTTGAAGCAAATAAAGA
EX888132       --> GTTTCAGACAATCAACGAAGCTTACGATATTGTGTTGAAGCAAATAAAGA
EX749233       --> ..................................................

               451    -    501
UN13644        --> ATCAGATGGAGGGAACAGAGGAGTTTCAGCCATTCGATGTCTATGAAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX777427       <-- ATCAGATGGAGGGAACAGAGGAGTTTCAGCCATTCGATGTCTATGAAGAG
EX752978       <-- ATCAGATGGAGGGAACAGAGGAGTTTCAGCCATTCGATGTCTATGAAGAG
EX775903       <-- ATCAGATGGAGGGAACAGAGGAGTTTCAGCCATTCGATGTCTATGAAGAG
EX777690       <-- ATCAGATGGAGGGAACAGAGGAGTTTCAGCCATTCGATGTCTATGAAGAG
EX890875       <-- ATCAGATGGAGGGAACAGAGGAGTTTCAGCCATTCGATGTCTATGAAGAG
EX892130       <-- ATCAGATGGAGGGAACAGAGGAGTTTCAGCCATTCGATGTCTATGAAGAG
FD573659       <-- ATCAGATGGAGGGAACAGAGGAGTTTCAGCCATTCGATGTCTATGAAGAG
EY919281       <-- ATCAGATGGAGGGAACAGAGGAGTTTCAGCCATTCGATGTCTATGAAGAG
FD537289       <-- ATCAGATGGAGGGAACAGAGGAGTTTCAGCCATTCGATGTCTATGAAGAG
FD974810       <-- ATCAGATGGAGGGAACAGAGGAGTTTCAGCCATTCGATGTCTATGAAGAG
EY919729       <-- ATCAGATGGAGGGAACAGAGGAGTTTCAGCCATTCGATGTCTATGAAGAG
EX771818       --> ATCAGATGGAGGGAACAGAGGAGTTTCAGCCATTCGATGTCTATGAAGAG
EX773892       --> ATCAGATGGAGGGAACAGAGGAGTTTCAGCCATTCGATGTCTATGAAGAG
FD540872       --> ATCAGATGGAGGGAACAGAGGAGTTTCAGCCATTCGATGTCTATGAAGAG
FD549519       --> ATCAGATGGAGGGAACAGAGGAGTTTCAGCCATTCGATGTCTATGAAGAG
FD978599       --> ATCAGATGGAGGGAACAGAGGAGTTTCAGCCATTCGATGTCTATGAAGAG
EV526121       --> ATCAGATGGAGGGAACAGAGGAGTTTCAGCCATTCGATGTCTATGAAGAG
EX886505       --> ATCAGATGGAGGGAACAGAGGAGTTTCAGCCATTCGATGTCTATGAAGAG
EY923487       --> ATCAGATGGAGGGAACAGAGGAGTTTCAGCCATTCGATGTCTATGAAGAG
EY924007       --> ATCAGATGGAGGGAACAGAGGAGTTTCAGCCATTCGATGTCTATGAAGAG
FD558333       --> ATCAGATGGAGGGAACAGAGGAGTTTCAGCCATTCGATGTCTATGAAGAG
FD569448       --> ATCAGATGGAGGGAACAGAGGAGTTTCAGCCATTCGATGTCTATGAAGAG
FD979043       --> ATCAGATGGAGGGAACAGAGGAGTTTCAGCCATTCGATGTCTATGAAGAG
FY428959       --> ATCAGATGGAGGGAACAGAGGAGTTTCAGCCATTCGATGTCTATGAAGAG
EX773616       --> ATCAGATGGAGGGAACAGAGGAGT..........................
FY430957       --> ATCAGATGGAGGGAACAGAGGAGTTTCAGCCATTCGATGTCTATGAAGAG
FY435009       --> ATCAGATGGAGGGAACAGAGGAGTTTCAGCCATTCGATGTCTATGAAGAG
FY437853       --> ATCAGATGGAGGGAACAGAGGAGTTTCAGCCATTCGATGTCTATGAAGAG
FY432066       --> ATCAGATGGAGGGAACAGAGGAGTTTCAGCCATTCGATGTCTATGAAGAG
FY430941       --> ATCAGATGGAGGGAACAGAGGAGTTTCAGCCATTCGATGTCTATGAAGAG
FY439708       --> ATCAGATGGAGGGAACAGAGGAGTTTCAGCCATTCGATGTCTATGAAGAG
EX765517       --> ATCAGATGGAGGGAACAGAGGAGTTTCAGCCATTCGATGTCTATGAAGAG
EX888132       --> ATCAGATGGAGGGAACAGAGGAGTTTCAGCCATTCGATGTCTATGAAGAG
EX749233       --> ..................................................

               501    -    551
UN13644        --> GGATTCAACGGAATGAACGATCCAGATTGTGACACGTGGGAGGAATGG-A
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX777427       <-- GGATTCAACGGAATGAACGATCCAGATTGTGACACGTGGGAGGAATGG-A
EX752978       <-- GGATTCAACGGAATGAACGATCCAGATTGTGACACGTGGGAGGAATGG-A
EX775903       <-- GGATTCAACGGAATGAACGATCCAGATTGTGACACGTGGGAGGAATGG-A
EX777690       <-- GGATTCAACGGAATGAACGATCCAGATTGTGACACGTGGGAGGAATGG-A
EX890875       <-- GGATTCAACGGAATGAACGATCCAGATTGTGACACGTGGGAGGAATGG-A
EX892130       <-- GGATTCAACGGAATGAACGATCCAGATTGTGACACGTGGGAGGAATGG-A
FD573659       <-- GGATTCAACGGAATGAACGATCCAGATTGTGACACGTGGGAGGAATGG-A
EY919281       <-- GGATTCAACGGAATGAACGATCCAGATTGTGACACGTGGGAGGAATGG-A
FD537289       <-- GGACTCAACGGAATGAACGATCCAGATTGTGACACGTGGGAGGAATGG-A
FD974810       <-- GGATTCAACGGAATGAACGATCCAGATTGTGACACGTGGGAGGAATGG-A
EY919729       <-- GGATTCAACGGAATGAACGATCCAGATTGTGACACGTGGGAGGAATGG-A
EX771818       --> GGATTCAACGGAATGAACGATCCAGATTGTGACACGTGGGAGGAATGG-A
EX773892       --> GGATTCAACGGAATGAACGATCCAGATTGTGACACGTGGGAGGAATGG-A
FD540872       --> GGACTCAACGGAATGAACGATCCAGATTGTGACACGTGGGAGGA-TGG-A
FD549519       --> GGATTCAACGGAATGAACGATCCAGATTGTGACACGTGGGAGGAATGG-A
FD978599       --> GGATTCAACGGAATGAACGATCCAGATTGTGACACGTGGGAGGAATGGGA
EV526121       --> GGATTCAACGGAATGAACGATCCAGATTGTGACACGTGGGAGGAATGG-A
EX886505       --> GGATTCAACGGAATGAACGATCCAGATTGTGACACGTGGGAGGAATGG-A
EY923487       --> GGATTCAACGGAATGAACGATCCAGATTGTGACACGTGGGAGGAATGG-A
EY924007       --> GGATTCAACGGAATGAACGATCCAGATTGTGACACGTGGGAGGAATGG-A
FD558333       --> GGATTCAACGGAATGAACGATCCAGATTGTGACACGTGGGAGGAATGG-A
FD569448       --> GGATTCAACGGAATGAACGATCCAGATTGTGACACGTGGGAGGAATGG-A
FD979043       --> GGATTCAACGGAATGAACGATCCAGATTGTGACACGTGGGAGGAATGG-A
FY428959       --> GGATTCAACGGAATGAACGATCCAGATTGTGACACGTGGGAGGAATGG-A
EX773616       --> ..................................................
FY430957       --> GGATTCAACGGAATGAACGATCCAGATTGTGACACGTGGGAGGAATGG-A
FY435009       --> GGATTCAACGGAATGAACGATCCAGATTGTGACACGTGGGAGGAATGG-A
FY437853       --> GGATTCAACGGAATGAACGATCCAGATTGTGACACGTGGGAGGAATGG-A
FY432066       --> GGATTCAACGGAATGAACGATCCAGATTGTGACACGTGGGAGGAATGG-A
FY430941       --> GGATTCAACGGAATGAACGATCCAGATTGTGACACGTGGGAGGAATGG-A
FY439708       --> GGATTCAACGGAATGAACGATCCAGATTGTGACACGTGGGAGGAATGG-A
EX765517       --> GGATTCAACGGAATGAATGATCCAGATTGTGACACGTGGGAGGAATGG-A
EX888132       --> GGATTCAACGGAATGAACGATCCAGATTGTGACACGTGGGAGGAATGG-A
EX749233       --> ..................................................

               551    -    601
UN13644        --> TGGGG--TGGG-AAGGTGCAGGAACCAGAGACTACTCCTCTCACGTGAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX777427       <-- TGGGG--TGGG-AAGGTGCAGGAATCAGAGACTACTCCTCTCACGTGAAT  Raphanus raphanistrum subsp. landra
EX752978       <-- TGGGG--TGGA-AAGGTGCAGAAACCAGAGACTACTCCTCTCACGTGAAT  Raphanus raphanistrum subsp. maritimus
EX775903       <-- TGGGG--TGGG-AAGGTGCAGGAATCAGAGACTACTCCTCTCACGTGAAT  Raphanus raphanistrum subsp. landra
EX777690       <-- TGGGG--TGGG-AAGGTGCAGGAATCAGAGACTACTCCTCTCACGTGAAT  Raphanus raphanistrum subsp. landra
EX890875       <-- TGGGA--TGGG-AAGGTGCAGGAACCAGAGACTACTCCTCTCACGTGAAT  Raphanus sativus var. oleiformis
EX892130       <-- TGGGA--TGGG-AAGGTGCAGGAACCAGAGACTACTCCTCTCACGTGAAT  Raphanus sativus var. oleiformis
FD573659       <-- TGGGG--TGGG-AAGGTGCAGGAACCAGAGACTACTCCCCTCACGTGAAT  Raphanus sativus cv Early Scarlet Globe
EY919281       <-- TGGGG--TGGG-AAGGTGCAGGAATCAGAGACTACTCCTCTCACGTGAAT  Raphanus raphanistrum subsp. landra
FD537289       <-- TGGGG--TGGG-AAGGTGCAGGAACCAGAGACTACTCCTCTCACGTGAAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD974810       <-- TGGGG--TGGG-AAGGTGCAGGAACCAGAGACTACTCCTCTCACGTGAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY919729       <-- TGGGG--TGGG-AAGGTGCAGGAATCAGAGACTACTCCTCTCACGTGAAT  Raphanus raphanistrum subsp. landra
EX771818       --> TGGGG--GGGGGAAGGTGCAGGAATCAGAGACTACTCCTCTCACGTGAAT  Raphanus raphanistrum subsp. landra
EX773892       --> TGGGG.............................................  Raphanus raphanistrum subsp. landra
FD540872       --> TGGGGGTTGGG-AAGGT.................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD549519       --> TGGGG--TGGG.......................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD978599       --> TGGGGGTTGGG-AAGGTGCAG-AACCAGAGACTACTCCTCTCACGTGAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV526121       --> TGGGG--TGGG-AAGGTGCAGGAACCAGAGACTACTCCTCTCACGTGAAT  Raphanus raphanistrum subsp. maritimus
EX886505       --> TGGGG-ATGGG-AAGGT.................................  Raphanus sativus var. oleiformis
EY923487       --> TGGGGgt...........................................  Raphanus raphanistrum subsp. landra
EY924007       --> TGGGG--TGGG-AAGGTGCAG-AATCAGAGACTACTCCTCTCACGTGAAT  Raphanus raphanistrum subsp. landra
FD558333       --> TGGGG--TGGG-AAGGT.................................  Raphanus raphanistrum subsp. landra
FD569448       --> TGGGG--TGGG-AAagg.................................  Raphanus sativus cv Early Scarlet Globe
FD979043       --> TGGGG--TGGG-AAGGT.................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY428959       --> TGGGG--TGGG-AAGGTGCAGGAAC-AGAGACTACTC-TCTCATGTGA..  Raphanus sativus cv GSK3-1
EX773616       --> ..................................................  Raphanus raphanistrum subsp. landra
FY430957       --> TGGGG--TGGG-AAGGTGCAGGAACCAGAGACTACTCCTCTCATGTGAAT  Raphanus sativus cv GSK3-1
FY435009       --> TGGGG--TGGG-AAGGTGCAGGAACCAGAGACTACTCCTCTCATGTGAAT  Raphanus sativus cv GSK3-1
FY437853       --> TGGGG--TGGG-AAGGTGCAGGAACCAGAGACTACTCCTCTCATGTGAAT  Raphanus sativus cv GSK3-1
FY432066       --> TGGGG--TGGG-AAGGTGCAGGAACCAGAGACTACTCCTCTCATGTGAAT  Raphanus sativus cv GSK3-1
FY430941       --> TGGGG--TGGG-AAGGTGCAGGAACCAGAGACTACTCCTCTCATGTGAAT  Raphanus sativus cv GSK3-1
FY439708       --> TGGGG--TGGG-AAGGTGCAGGAACCAGAGACTACTCCTCTCATGTGAAT  Raphanus sativus cv GSK3-1
EX765517       --> TGGGG--TGGG-AAGGTGCAGGAACCAGAGACTACTCCTCTCACGTGAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX888132       --> TG................................................  Raphanus sativus var. oleiformis
EX749233       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               601    -    651
UN13644        --> CCTTACGCGTGAAGACGACGGTGACCGACTTGGCAATGATTGTATGCAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX777427       <-- CCTTACGCGTGAAGACGACGGCGACCTACTTGGCAATGATTGTATGCAGA  Raphanus raphanistrum subsp. landra
EX752978       <-- CCTTACGCGTGAAGACGACGGTGACCGACTTGGCAATGATTGTATGCAGA  Raphanus raphanistrum subsp. maritimus
EX775903       <-- CCTTACGCGTGAAGACGACGGCGACCTACTTGGCAATGATTGTATGCAGA  Raphanus raphanistrum subsp. landra
EX777690       <-- CCTTACGCGTGAAGACGACGGCGACCTACTTGGCAATGATTGTATGCAGA  Raphanus raphanistrum subsp. landra
EX890875       <-- CCTTACGCGTGAAGACGACGGTGACCGACTTGGCAATGATTGTATGCAGA  Raphanus sativus var. oleiformis
EX892130       <-- CCTTACGCGTGAAGACGACGGTGATCGACTTGGCAATGATTGTATGCAGA  Raphanus sativus var. oleiformis
FD573659       <-- CCTTACGCGTGAAGACGACGGTGACCGACTTGGCAATGATTGTATGCAGA  Raphanus sativus cv Early Scarlet Globe
EY919281       <-- CCTTACGCGTGAAGACGACGGCGACCTACTTGGCAATGATTGTATGCAGA  Raphanus raphanistrum subsp. landra
FD537289       <-- CCTTACGCGTGAAGACGACGGTGACCGACTTGGCAATGATTGTATGCAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD974810       <-- CCTTACGCGTGAAGACGATGGTGACCGACTTGGCAATGATTGTATGCAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY919729       <-- CCTTACGCGTGAAGACGACGGCGACCTACTTGGCAATGATTGTATGCAGA  Raphanus raphanistrum subsp. landra
EX771818       --> CCTTACGCGTGAAGACGACGGCGACCTACTTGGCAATGATTGTATGCAGA  Raphanus raphanistrum subsp. landra
EX773892       --> ..................................................  Raphanus raphanistrum subsp. landra
FD540872       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD549519       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD978599       --> CCTTACGCGTGAAGACGATGGTGACCGACTTGGCAATGATTGTATGCAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV526121       --> CCTTACGCGTGAAGACGACGGTGACCGACTTGGCAATGATTGTATGCAGA  Raphanus raphanistrum subsp. maritimus
EX886505       --> ..................................................  Raphanus sativus var. oleiformis
EY923487       --> ..................................................  Raphanus raphanistrum subsp. landra
EY924007       --> CCTTACGCGTGAAGACGACGGCGACCTACTT...................  Raphanus raphanistrum subsp. landra
FD558333       --> ..................................................  Raphanus raphanistrum subsp. landra
FD569448       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD979043       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY428959       --> ..................................................  Raphanus sativus cv GSK3-1
EX773616       --> ..................................................  Raphanus raphanistrum subsp. landra
FY430957       --> CCTTACGCGTGAAGACGACGGTGACCGACTTGGCAATGATTGTATGCAGA  Raphanus sativus cv GSK3-1
FY435009       --> CCTTACGCGTGAAGACGACGGTGACCGACTTGGCAATGATTGTATGCAGA  Raphanus sativus cv GSK3-1
FY437853       --> CCTTACGCGTGAAGACGACGGTGACCGACTTGGCAATGATTGTATGCAGA  Raphanus sativus cv GSK3-1
FY432066       --> CCTTACGCGTGAAGACGACGGTGACCGACTTGGCAATGATTGTATGCAGA  Raphanus sativus cv GSK3-1
FY430941       --> CCTTACGCGTGAAGACGACGGTGACCGACTTGGCAATGATTGTATGCAGA  Raphanus sativus cv GSK3-1
FY439708       --> CCTTACGCGTGAAGACGACGGTGACCGACTTGGCAATGATTGTATGCAGA  Raphanus sativus cv GSK3-1
EX765517       --> CCTTACGCGTGAAGACGACGGTGACCGACTTGGCAATGATTGTATGCAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX888132       --> ..................................................  Raphanus sativus var. oleiformis
EX749233       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               651    -    701
UN13644        --> TAAA-TAACAACAG----AGAGAGAGAGA--CTGTAAGATCAATGTAAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX777427       <-- TAAA-TAACAACAG----AGAGAGAGGGA--CTGTAAGATCAATGTAAAT  Raphanus raphanistrum subsp. landra
EX752978       <-- TAAA-TAACAACAG----AGAGAGAGAGAGACTGTAAGATCAATGTAAAT  Raphanus raphanistrum subsp. maritimus
EX775903       <-- TAAA-TAACAACAG----AGAGAGAGGGA--CTGTAAGATCAATGTAAAT  Raphanus raphanistrum subsp. landra
EX777690       <-- TAAA-TAACAACAG----AGAGAGAGGGA--CTGTAAGATCAATGTAAAT  Raphanus raphanistrum subsp. landra
EX890875       <-- TAAAATAACAACAG----AGAGAGACAGA--CTGTAAGATCAATGTAAAT  Raphanus sativus var. oleiformis
EX892130       <-- TAAAATAACAACAG----AGAGAGACAGA--CTGTAAGATCAATGTAAAT  Raphanus sativus var. oleiformis
FD573659       <-- TAAA-TAACAACAGCGAGAGAGAGAGAGA--CTGTAAGATCAATGTAAAT  Raphanus sativus cv Early Scarlet Globe
EY919281       <-- TAAA-TAACAACAG----AGAGAGAGGGA--CTGTAAGATCAATGTAAAT  Raphanus raphanistrum subsp. landra
FD537289       <-- TAAA-TAACAACAG----AGAGAGAGAGAGACTGTAAGATCAATGTAAAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD974810       <-- TAAA-TAACAACAG----AGAGAGAGAGA--CTGTAAGATCAATGTAAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY919729       <-- TAAA-TAACAACAG----AGAGAGAGGGA--CTGTAAGATCAATGTAAAT  Raphanus raphanistrum subsp. landra
EX771818       --> TAAA-TAACAACAG----AGAGAGAGGGA--CTGTAAGATCAATGTAAAT  Raphanus raphanistrum subsp. landra
EX773892       --> ..................................................  Raphanus raphanistrum subsp. landra
FD540872       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD549519       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD978599       --> TAAA-TAACAACAG----AGAGAGAGAGA--CTGTAAGATCAATGTAAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV526121       --> TAAA-TAACAACAG----AGAGAGAGAGAGACTGTAAGATCAATGTAAAT  Raphanus raphanistrum subsp. maritimus
EX886505       --> ..................................................  Raphanus sativus var. oleiformis
EY923487       --> ..................................................  Raphanus raphanistrum subsp. landra
EY924007       --> ..................................................  Raphanus raphanistrum subsp. landra
FD558333       --> ..................................................  Raphanus raphanistrum subsp. landra
FD569448       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD979043       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY428959       --> ..................................................  Raphanus sativus cv GSK3-1
EX773616       --> ..................................................  Raphanus raphanistrum subsp. landra
FY430957       --> TAAA-TAACAACAG----AGAGAGAGAGA--CTGTAAGATCAATGTAAAT  Raphanus sativus cv GSK3-1
FY435009       --> TAAA-TAACAACAG----AGAGAGAGAGA--CTGTAAGATCAATGTAAAT  Raphanus sativus cv GSK3-1
FY437853       --> TAAA-TAACAACAG----AGAGAGAGAGA--CTGTAAGATCAATGTAAAT  Raphanus sativus cv GSK3-1
FY432066       --> TAAA-TAACAACAG----AGAGAGAGAGA--CTGTAAGATCAATGTAAAT  Raphanus sativus cv GSK3-1
FY430941       --> TAAA-TAACAACAG----AGAGAGAGAGA--CTGTAAGATCAATGTAAAT  Raphanus sativus cv GSK3-1
FY439708       --> TAAA-TAACAACAG----AGAGAGAGAGA--CTGTAAGATCAATGTAAAT  Raphanus sativus cv GSK3-1
EX765517       --> TAAA-TAACAACAG----AGAGAGAGA----CTGTAAGATCAATGTAAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX888132       --> ..................................................  Raphanus sativus var. oleiformis
EX749233       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               701    -    751
UN13644        --> AGTTGAAATTGTCTCTCTTGAATGGCTCTTAAATGTAAATAAAGTCATTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX777427       <-- AGTTGAAATTGTCTCTCTTGAATGGCTCTTAGATGTAAATAAAGTCATTT
EX752978       <-- AGTTGAAATTGTCTCTCTTGAATGGCTCTTAAATGTAAATAAAGTCATTT
EX775903       <-- AGTTGAAATTGTCTCTCTTGAATGGCTCTTAGATGTAAATAAAGTCATTT
EX777690       <-- AGTTGAAATTGTCTCTCTTGAATGGCTCTTAAATGTAAATAAAGTCATTT
EX890875       <-- AGTTGAAATTGTCTCTCTTGAATGGCTCTTAAATGTAAATAAAGTCATTT
EX892130       <-- AGTTGAAATTGTCTCTCTTGAATGGCTCTTAAATGTAAATAAAGTCATTT
FD573659       <-- AGTTGAAATTGTCTCTCTTGAATGGCTCTTAAATGTAAATAAAGTCATTT
EY919281       <-- AGTTGAAATTGTCTCTCTTGAATGGCTCTTAAATGTAAATAAAGTCATTT
FD537289       <-- AGTTGAAATTGTCTCTCTTGAATGGCTCTTAAATGTAAATAAAGTCATTT
FD974810       <-- AGTTGAAATTGTCTCTCTTGAATGGCTCTTAAATGTAAATAAAGTCATTT
EY919729       <-- AGTTGAAATTGTCTCTCTTGAATGGCTCTTAAATGTAAATAAAGTCATTT
EX771818       --> AGTTGAAATTGTCTCTCTTGAATGGCTCTTAGATGTAAATAAAGTCATTT
EX773892       --> ..................................................
FD540872       --> ..................................................
FD549519       --> ..................................................
FD978599       --> AGTTGAA-TTGTCTCTCTTGA-TGGCTCT--AATGTAAATAAAGTCAT..
EV526121       --> AGTTGAAATTGTCTCTCTTGAATGGCTCTTAAATGTAAATAAAGTCATTT
EX886505       --> ..................................................
EY923487       --> ..................................................
EY924007       --> ..................................................
FD558333       --> ..................................................
FD569448       --> ..................................................
FD979043       --> ..................................................
FY428959       --> ..................................................
EX773616       --> ..................................................
FY430957       --> AGTTGAAATTGTCTCTCTTGAATGGCTCTTAAATGTAAATAAAGTCATTT
FY435009       --> AGTTGAAATTGTCTCTCTTGAATGGCTCTTAAATGTAAATAAAGTCATTT
FY437853       --> AGTTGAAATTGTCTCTCTTGAATGGCTCTTAAATGTAAATAAAGTCATTT
FY432066       --> AGTTGAAATTGTCTCTCTTGAATGGCTCTTAAATGTAAATAAAGTCATTT
FY430941       --> AGTTGAAATTGTCTCTCTTGAATGGCTCTTAAATGTAAATAAAGTCATTT
FY439708       --> AGTTGAAATTGTCTCTCTTGAATGGCTCTTAAATGTAAATAAAGTCATTT
EX765517       --> AGTTGAAATTGTCTCTCTTGAATGGCTC......................
EX888132       --> ..................................................
EX749233       --> ..................................................

               751    -    801
UN13644        --> CTATGTTATGTAAA-CTCTCAAA-GATTCAGTGATTA---GCTTAAAAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX777427       <-- CTATGTTATGTAAAATTCTCAAA-GATTCAGTGATTA---GCTTAAAAGC  Raphanus raphanistrum subsp. landra
EX752978       <-- CTATGTTATGTAAA-CTCTCAAA-GATTCAGTGATTA---GCTTAAAAGC  Raphanus raphanistrum subsp. maritimus
EX775903       <-- CTATGTTATGTAAAATTCTCAAA-GATTCAGTGATTA---GCTTAAAAGC  Raphanus raphanistrum subsp. landra
EX777690       <-- CTATGTTATGTAAAATTCTCAAA-GATTCAGTGATTA---GCTTAAAAGC  Raphanus raphanistrum subsp. landra
EX890875       <-- CTATGTTATGTAAAATTCTCAAA-GATTCAGTGATTA---GCTTAAAAGC  Raphanus sativus var. oleiformis
EX892130       <-- CTATGTTATGTAAAATTCTCAAA-GATTCAGTGATTA---GCTTAAAAGC  Raphanus sativus var. oleiformis
FD573659       <-- CTATGTTATGTAAA-CTCTCAAA-GATTCAGTGATTA---GC........  Raphanus sativus cv Early Scarlet Globe
EY919281       <-- CTATGTTATGTAAAATTCTCAAA-GATTCAGTGATTA---GCTTAAAAGC  Raphanus raphanistrum subsp. landra
FD537289       <-- TTCCGTTATGTAAA-C-CTCAAAACATTCACGGATAA---GCTCAAAAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD974810       <-- CTATGTTATGTAAA-CTCTCAAA-GATTCAGTGATTATTAGCTTAAAAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY919729       <-- CTATGTTATGTAAAATTCTCAAA-GATTCAGTGATTA---GCTTAAAAGC  Raphanus raphanistrum subsp. landra
EX771818       --> CTATGTTATGTAAA-TTCTCAAA-G.........................  Raphanus raphanistrum subsp. landra
EX773892       --> ..................................................  Raphanus raphanistrum subsp. landra
FD540872       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD549519       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD978599       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV526121       --> CTATGTTATGTAAA-CTCTCAAA-GATTCAGTGATTA---GCTTAAAAGC  Raphanus raphanistrum subsp. maritimus
EX886505       --> ..................................................  Raphanus sativus var. oleiformis
EY923487       --> ..................................................  Raphanus raphanistrum subsp. landra
EY924007       --> ..................................................  Raphanus raphanistrum subsp. landra
FD558333       --> ..................................................  Raphanus raphanistrum subsp. landra
FD569448       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD979043       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY428959       --> ..................................................  Raphanus sativus cv GSK3-1
EX773616       --> ..................................................  Raphanus raphanistrum subsp. landra
FY430957       --> CTATGTTATGTAAA-CTCTCAAA-GATTCAGTGATTA---GCTTAAAAGC  Raphanus sativus cv GSK3-1
FY435009       --> CTATGTTATGTAAA-CTCTCAAA-GATTCAGTGATTA---GCTTAAAAGC  Raphanus sativus cv GSK3-1
FY437853       --> CTATGTTATGTAAA-CTCTCAAA-GATTCAGTGATTA---GCTTAAAAGC  Raphanus sativus cv GSK3-1
FY432066       --> CTATGTTATGTAAA-CTCTCAAA-GATTCAGTGATTA---GCTTAAAAGC  Raphanus sativus cv GSK3-1
FY430941       --> CTATGTTATGTAAA-CTCTCAAA-GATTCAGTGATTA---GCTTAAAAGC  Raphanus sativus cv GSK3-1
FY439708       --> CTATGTTATGTAAA-CTCTCAAA-GATTCAGTGATTA---GCTTAAAAGC  Raphanus sativus cv GSK3-1
EX765517       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX888132       --> ..................................................  Raphanus sativus var. oleiformis
EX749233       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               801    -    851
UN13644        --> TTTCCTGAATTTGGATCTAATGATA--ATAATTTGGATTCGAAGTTTGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX777427       <-- TTTCCTGAATTTGGATCTAATGATA--ATttggattc.............
EX752978       <-- TTTCCTGAATTTGGATCTAATGATA--ATAATTTGGATTCGAAGTTTGTT
EX775903       <-- TTTCCTGAATTTGGATCTAATGATA--ATttggattc.............
EX777690       <-- TTTCCTGAATTTGGATCTAATGATA--ATAATTTGGATT...........
EX890875       <-- TTTCCTGAATTTGGATCTAATGATA--ATAATTTGGATTCGAAGTTTGTT
EX892130       <-- CTTCCTGAATTTGGATCTAATGATA--ATAATTTGGATT...........
FD573659       <-- ..................................................
EY919281       <-- TTTCCTGAATTTGGATCc................................
FD537289       <-- TTTCCTGAATTCGGATCTAATGATATAATAATTTGGATTCGAAGTT....
FD974810       <-- TTTCCTG...........................................
EY919729       <-- TTTCCTGAATTTGGATCc................................
EX771818       --> ..................................................
EX773892       --> ..................................................
FD540872       --> ..................................................
FD549519       --> ..................................................
FD978599       --> ..................................................
EV526121       --> TTTC..............................................
EX886505       --> ..................................................
EY923487       --> ..................................................
EY924007       --> ..................................................
FD558333       --> ..................................................
FD569448       --> ..................................................
FD979043       --> ..................................................
FY428959       --> ..................................................
EX773616       --> ..................................................
FY430957       --> TTTCCTGAATTTGGATCTAATGATA--ATAATTTGGATTCG.........
FY435009       --> TTTCCTGAATTTGGATCTAATGATA--ATAATTTGGATTCGAAGTTTGTT
FY437853       --> TTTCCTGAATTTGGATCTAATGATA--ATAATTTGGATTCGAAGTTTaaa
FY432066       --> TTTCCTGAATTTGGATCTAATGATA--ATAATTTGGATTCG.........
FY430941       --> TTTCCTGAATTTGGATCTAATGATA--ATAATTTGGATTCG.........
FY439708       --> TTTCCTGAATTTGGATCTAATGATA--ATAATTTGGATTCGAAGTTTGTT
EX765517       --> ..................................................
EX888132       --> ..................................................
EX749233       --> ..................................................

               851    -    901
UN13644        --> TC
                   ~~
EX777427       <-- ..
EX752978       <-- cc
EX775903       <-- ..
EX777690       <-- ..
EX890875       <-- ..
EX892130       <-- ..
FD573659       <-- ..
EY919281       <-- ..
FD537289       <-- ..
FD974810       <-- ..
EY919729       <-- ..
EX771818       --> ..
EX773892       --> ..
FD540872       --> ..
FD549519       --> ..
FD978599       --> ..
EV526121       --> ..
EX886505       --> ..
EY923487       --> ..
EY924007       --> ..
FD558333       --> ..
FD569448       --> ..
FD979043       --> ..
FY428959       --> ..
EX773616       --> ..
FY430957       --> ..
FY435009       --> TC
FY437853       --> aa
FY432066       --> ..
FY430941       --> ..
FY439708       --> TC
EX765517       --> ..
EX888132       --> ..
EX749233       --> ..