1      -     51
UN13646        --> ATCCTCAACTTCTTAAACTTTTATATCTCAAAATACAAATGGACAATAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX748616       <-- ............TTAAACTTT-ATATCTCAAAATACAAATGGACAATAGT
FD971170       <-- ..................................................
EX772396       <-- ..................................................
FD544005       <-- ..................................................
FD973013       <-- ..................................................
EX749247       <-- ..................................................
EW716792       <-- ..................................................
FD540949       <-- ..................................................
FY428192       --> ATCCTCAACTTCTTAAACTTTTATATCTCAAAATACAAATGGACAATAGT
EX752500       --> ..CCTCAACTTCTTAAACTTTTATATCTCAAAATACAAATGGACAATAGT
FD539706       --> ..CCTCAACTTCTTAAACTTT-ATATCTCAAAATACAAATGAACAATAGT
EX752988       --> .....CAACTTCTTAAACTTTTATATCTCAAAATACAAATGGACAATAGT

               51     -    101
UN13646        --> ACAAACCAAATAAGAAAAAAAAA-TCTAACCAACTCGGCATATATATATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX748616       <-- ACAAACCAAATAAGAAAAAAAA--TCTAACCAACTCGGCATATATATATT  Raphanus raphanistrum subsp. maritimus
FD971170       <-- .........ATAAAAAAAAAAAA-TCTAACCAACTCGACATATATATAT-  Raphanus raphanistrum subsp. raphanistrum (MS)
EX772396       <-- .........................CTAACCAACTCGGCATATATATAT-  Raphanus raphanistrum subsp. landra
FD544005       <-- ..................................TCGACATATATATATT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD973013       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX749247       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EW716792       <-- ..................................................  Raphanus sativus var. oleiformis
FD540949       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FY428192       --> ACAAACCAAATAAGAAAAAAAAA-TCTAACCAACTCGGCATATATATATT  Raphanus sativus cv GSK3-1
EX752500       --> ACAAACCAAATAAGAAAAAAAA--TCTAACCAACTCGGCATATATATATT  Raphanus raphanistrum subsp. maritimus
FD539706       --> ACAAACCACATAAGAAAAAAAAAATCTAACCAACTCGACATATATATATT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX752988       --> ACAAACCAAATAAGAAAAAAAAA-TCTAACCAACTTGGCATATATATATT  Raphanus raphanistrum subsp. maritimus

               101    -    151
UN13646        --> ACATTTACGGAGACCATTATATATATTATTTATATATGAGATGCCGCAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX748616       <-- ACATTTACGGAGACCATTATATATATTATTTATATATGAGATGCCGCAAA  Raphanus raphanistrum subsp. maritimus
FD971170       <-- ACATT-ACGAAGATCATTATATATATTATTTATATATGAGATGCCACAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX772396       <-- ACATT-ACGGAGACCATTATATATAT-ATTTATATATGAGATGCCGCAAA  Raphanus raphanistrum subsp. landra
FD544005       <-- ACATT-ACGAAGATCATTATATATATTATTTATATATGAGATGCCACAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD973013       <-- .......cgaAGATCATTATATATATTATTTATATATGAGATGCCACAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX749247       <-- ....................................TGAGATGCCGCAAA  Raphanus raphanistrum subsp. maritimus
EW716792       <-- ..................................................  Raphanus sativus var. oleiformis
FD540949       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FY428192       --> ACATTTACGGAGACCATTATATATATTATTTATATATGAGATGCCACAAA  Raphanus sativus cv GSK3-1
EX752500       --> ACATTTACGGAGACCATTATATATATTATTTATATATGAGATGCCGCAAA  Raphanus raphanistrum subsp. maritimus
FD539706       --> ACATTTACGAAGATCATTATATATATTATTTATATATGAGATGCCACAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX752988       --> ACATTTACGGAGACCATTATATATATTATTTATATATGAGATGCCGCAAA  Raphanus raphanistrum subsp. maritimus

               151    -    201
UN13646        --> ATATTTCTTAAAACT-----TAAATTAATACTTCTTAGCAAATGCATTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX748616       <-- ATATTTCTTAAAACT-----TAAATTAATACTTCTTAGCAAATGCATTAA  Raphanus raphanistrum subsp. maritimus
FD971170       <-- ATATTTCTTAAAACTAGTTTTAAATTAATACTTTTTAGCAAATGCATTAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX772396       <-- -TATTTCTTAAAACT-----TAAATTAATACTTCTTAGCAAATGCATTAA  Raphanus raphanistrum subsp. landra
FD544005       <-- ATATTTCTTAAAACTAGTTTTAAATTAATACTTTTTAGCAAATGCATTAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD973013       <-- ATATTTCTTAAAACTAGTTTTAAATTAATACTTTTTAGCAAATGCATTAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX749247       <-- ATATTTCT-AAAACT-----TAAATTAATACTTCTTAGCAAATGCATTAA  Raphanus raphanistrum subsp. maritimus
EW716792       <-- ........TAAAGCT-----TAAATTAATACTTCTTAGCAAATGCATTAA  Raphanus sativus var. oleiformis
FD540949       <-- .........................................ATGCATTAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FY428192       --> ATATTTCTTAAAACT-----TAAATTAATACTTCTTAGCAAATGCATTAA  Raphanus sativus cv GSK3-1
EX752500       --> ATATTTCTTAAAACT-----TAAATTAATACTTCTTAGCAAATGCATTAA  Raphanus raphanistrum subsp. maritimus
FD539706       --> ATATTTCTTAAAACTAGTTTTAAATTAATACTTTTTAGCAAATGCATTAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX752988       --> ATATTTCTTAAAACT-----TAAATTAATACTTCTTAGCAAATGCATTAA  Raphanus raphanistrum subsp. maritimus

               201    -    251
UN13646        --> TCAAGGACAGGGCGTTGCTAGTTTCGTGACCCACGTTAACAATTCTAGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX748616       <-- TCAAGGACAGGGCGTTGCTAGTTTCGTGACCCACGTTAACAATTCTAGCT  Raphanus raphanistrum subsp. maritimus
FD971170       <-- TCAAGGACAAGGCGTTGCTGGTTTCGTGACCCACGTTAACAATTCTAGCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX772396       <-- TCAAGGACAGGGCGTTGCTAGTTTCGTGACCCACGTTAACAATTCTAGCT  Raphanus raphanistrum subsp. landra
FD544005       <-- TCAAGGACAAGGCGTTGCTGGTTTCGTGACCCACGTTAACAATTCTAGCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD973013       <-- TCAAGGACAAGGCGTTGCTGGTTTCGTGACCCACGTTAACAATTCTAGCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX749247       <-- TCAAGGACAGGGCGTTGCTAGTTTC--GACCCACGTTAACAAT-CTAGCT  Raphanus raphanistrum subsp. maritimus
EW716792       <-- TCAAGGACAGGGCGTTGCTAGTTTCGTGACCCACGTTAACAATTCTAGCT  Raphanus sativus var. oleiformis
FD540949       <-- TCAAGGACAAGGCGTTGCTGGTTTCGTGACCCACGTTAACAATTCTAGCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FY428192       --> TCAAGGACAGGGCGTTGCTAGTTTCGTGACCCACGTTAACAATTCTAGCT  Raphanus sativus cv GSK3-1
EX752500       --> TCAAGGACAGGGCGTTGCTAGTTTCGTGACCCACGTTAACAATTCTAGCT  Raphanus raphanistrum subsp. maritimus
FD539706       --> TCAAGGACAAGGCGTTGCTGGTTTCGTGACCCACGTTAACAATTCTAGCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX752988       --> TCAAGGACAGGGCGTTGCTAGTTTCG--ACCCACGTTAACAATTCTAGCT  Raphanus raphanistrum subsp. maritimus

               251    -    301
UN13646        --> CGAACCGAGTTCTTGATCCTTCCATCCATGACCCGACCC-GAGAAACCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX748616       <-- CGAACCGAGTTCTTGATCCTTCCATCCATGACCCGACCC-GAGAAACCAT
FD971170       <-- CGAACCGAGTTCTTGATCCTTCCATCCATGACCCGACCC-GAGAAACCAT
EX772396       <-- CGAACCGAGTTCTTGATCCTTCCATCCATGACCCGACCC-GAGAAACCAT
FD544005       <-- CGAACCGAGTTCTTGATCCTTCCATCCATGACCCGACCC-GAGAAACCAT
FD973013       <-- CGAACCGAGTTCTTGATCCTTCCATCCATGACCCGACCC-GAGAAACCAT
EX749247       <-- CGAACCGAGTTCTTGATCCTTCCATCCATGACCCGACCCCGAGAAACCAT
EW716792       <-- CGAACCGAGTTCTTGATCCTTCCATCCATGACCCGACCC-GAGAAACCAT
FD540949       <-- CGAACCGAGTTCTTGATCCTTCCATCCATGACCCGACCC-GAGAAACCAT
FY428192       --> CGAACCGAGTTCTTGATCCTTCCATCCATGACCCGACCC-GAGAAACCAT
EX752500       --> CGAACCGAGTTCTTGATCCTTCCATCCATGACCCGACCC-GAGAAACCAT
FD539706       --> CGAACCGAGTTCTTGATCCTTCCATCCATGACCCGACCC-GAGAAACCAT
EX752988       --> CGAACCGAGTTCTTGATCCTTCCATCCATGACCCGACCC-GAGAAACCAT

               301    -    351
UN13646        --> CGGAGCAAGTGTTCTCATCTGTCAAAGCCGCACTAGTCCAAGTCTGAGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX748616       <-- CGGAGCAAGTGTTCTCATCTGTCAAAGCCGCACTAGTCCAAGTCTGAGCA
FD971170       <-- CGGAGCAAGTGTTCTCATCTGTCAAAGCCGCACTAGTCCAAGTCTGAGCA
EX772396       <-- CGGAGCAAGTGTTCTCATCTGTCAAAGCCGCACTAGTCCAAGTCTGAGCA
FD544005       <-- CGGAGCAAGTGTTCTCATCTGTCAAAGCCGCACTAGTCCAAGTCTGAGCA
FD973013       <-- CGGAGCAAGTGTTCTCATCTGTCAAAGCCGCACTAGTCCAAGTCTGAGCA
EX749247       <-- CGGAGCAAGTGTTCTCATCTGTCAAAGCCGCACTAGTCCAAGTCTGAGCA
EW716792       <-- CGGAGCAAGTGTTCTCATCTGTCAAAGCCGCACTAGTCCAAGTCTGAGCA
FD540949       <-- CGGAGCAAGTGTTCTCATCTGTCAAAGCCGCACTAGTCCAAGTCTGAGCA
FY428192       --> CGGAGCAAGTGTTCTCATCTGTCAAAGCCGCACTAGTCCAAGTCTGAGCA
EX752500       --> CGGAGCAAGTGTTCTCATCTGTCAAAGCCGCACTAGTCCAAGTCTGAGCA
FD539706       --> CGGAGCAAGTGTTCTCATCTGTCAAAGCCGCACTAGTCCAAGTCTGAGCA
EX752988       --> CGGAGCAAGTGTTCTCATCTGTCAAAGCCGCACTAGTCCAAGTCTGAGCA

               351    -    401
UN13646        --> TTACTCATGTGGAACGCAAACTGATCTTGATTTTTGGCACTCCCACATAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX748616       <-- TTACTCATGTGGAACGCAAACTGATCTTGATTTTTGGCACTCCCACATAG
FD971170       <-- TTACTCATGTGGAACGCAAACTGATCTTGATTTTTGGCACTCCCACATAG
EX772396       <-- TTACTCATGTGGAACGCAAACTGATCTTGATTTTTGGCACTCCCACATAG
FD544005       <-- TTACTCATGTGGAACGCAAACTGATCTTGATTTTTGGCACTTCCACATAG
FD973013       <-- TTACTCATGTGGAACGCAAACTGATCTTGATTTTTGGCACTCCCACATAG
EX749247       <-- TTACTCATGTGGAACGCAAACTGATCTTGATTTTTGGCACTCCCACATAG
EW716792       <-- TTGCTCATGTGGAACGCAAACTGATCTTGATTTTTGGCACTCCCACATAG
FD540949       <-- TTACTCATGTGGAACGCAAACTGATCTTGATTTTTGGCACTCCCACATAG
FY428192       --> TTACTCATGTGGAACGCAAACTGATCTTGATTTTTGGCACTCCCACATAG
EX752500       --> TTACTCATGTGGAACGCAAACTGATCTTGATTTTTGGCACTCCCACATAG
FD539706       --> TTACTCATGTGGAACGCAAACTGATCTTGATTTTTGGCACTTCCACATAG
EX752988       --> TTACTCATGTGGAACGCAAACTGATCTTGATTTTTGGCACTCCCACATAG

               401    -    451
UN13646        --> CTTCATCTCTTGGACCGACTTGGTCAAACGGTCAATGGTATCGTTGATCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX748616       <-- CTTCATCTCTTGGACCGACTTGGTCAAACGGTCAATGGTATCGTTGATCT
FD971170       <-- CTTCATCTCTTGGACCGACTTGGTCAAACGGTCAATGGTATCGTTGATCT
EX772396       <-- CTTCATCTCTTGGACCGACTTGGTCAAACGGTCAATGGTATCGTTGATCT
FD544005       <-- CTTCATCTCTTGGACCGACTTGGTCAAACGGTCAATGGTATCGTTGATCT
FD973013       <-- CTTCATCTCTTGGACCGACTTGGTCAAACGGTCAATGGTATCGTTGATCT
EX749247       <-- CTTCATCTCTTGGACCGACTTGGTCAAACGGTCAATGGTATCGTTGATCT
EW716792       <-- CTTCATCTCTTGGACCGACTTGGTCAAACGGTCAATGGTATCGTTGATCT
FD540949       <-- CTTCATCTCTTGGACCGACTTGGTCAAACGGTCAATGGTATCGTTGATCT
FY428192       --> CTTCATCTCTTGGACCGACTTGGTCAAACGGTCAATGGTATCGTTGATCT
EX752500       --> CTTCATCTCTTGGACCGACTTGGTCAAACGGTCAATGGTATCGTTGATCT
FD539706       --> CTTCATCTCTTGGACCGACTTGGTCAAACGGTCAATGGTATCGTTGATCT
EX752988       --> CTTCATCTCTTGGACCGACTTGGTCAAACGGTCAATGGTATCGTTGATCT

               451    -    501
UN13646        --> CCTCAACGCAGTCCTTGATGGCTTCGACCTCGCGCTTCTTAAGGCCCTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX748616       <-- CCTCAACGCAGTCCTTGATGGCTTCGACCTCGCGCTTCTTAAGGCCCTTG
FD971170       <-- CCTCAACGCAGTCCTTGATGGCTTCGACCTCGCGCTTCTTAAGGCCCTTG
EX772396       <-- CCTCAACGCAGTCCTTGATGGCTTCGACCTCGCGCTTCTTAAGGCCCTTG
FD544005       <-- CCTCAACGCAGTCCTTGATGGCTTCGACCTCGCGCTTCTTAAGGCCCTTG
FD973013       <-- CCTCAACGCAGTCCTTGATGGCTTCGACCTCGCGCTTCTTAAGGCCCTTG
EX749247       <-- CCTCAACGCAGTCCTTGATGGCTTCGACCTCGCGCTTCTTAAGGCCCTTG
EW716792       <-- CCTCAACGCAGTCCTTGATGGCTTCAACCTCGCGCTTCTTAAGGCCCTTG
FD540949       <-- CCTCAACGCAGTCCTTGATGGCTTCGACCTCGCGCTCCTTAAGGCCCTTG
FY428192       --> CCTCAACGCAGTCCTTGATGGCTTCGACCTCGCGCTTCTTAAGGCCCTTG
EX752500       --> CCTCAACGCAGTCCTTGATGGCTTCGACCTCGCGCTTCTTAAGGCCCTTG
FD539706       --> CCTCAACGCAGTCCTTGATGGCTTCGACCTCGCGCTTCTTAAGGCCCTTG
EX752988       --> CCTCAACGCAGTCCTTGATGGCTTCGACCTCGCGCTTCTTAAGGCCCTTG

               501    -    551
UN13646        --> AAACGCGTCAGACGCGAGACGAAGAGTTTGGTGGATTGGGCTCGGCTCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX748616       <-- AAACGCGTCAGACGCGAGACGAAGAGTTTGGTGGATTGGGCTCGGCTCAG
FD971170       <-- AAACGCGTCAGACGCGAGACGAAGAGTTTGGTGGATTGGGCTCGGCTCAG
EX772396       <-- AAACGCGTCAGACGCGAGACGAAGAGTTTGGTGGATTGGGCTCGGCTCAG
FD544005       <-- AAACGCGTCAGACGCGAGACGAAGAGTTTGGTGGATTGGGCTCGGCTCAG
FD973013       <-- AAACGCGTCAGACGCGAGACGAAGAGTTTGGTGGATTGGGCTCGGCTCAG
EX749247       <-- AAACGCGTCAGACGCGAGACGAAGAGTTTGGTGGATTGGGCTCGGCTCAG
EW716792       <-- AAACGCGTCAGACGCGAGACGAAGAGTTTGGTGGATTGGGCTCGGCTCAG
FD540949       <-- AAACGCGTCAGACGCGAGACGAAGAGTTTGGTGGATTGGGCTCGGCTCAG
FY428192       --> AAACGCGTCAGACGCGAGACGAAGAGTTTGGTGGATTGGGCTCGGCTCAG
EX752500       --> AAACGCGTCAGACGCGAGACGAAGAGTTTGGTGGATTGGGCTCGGCTCAG
FD539706       --> AAACGCGTCAGACGCGAGACGAAGAGTTTGGTGGATTGGGCTCGGCTCAG
EX752988       --> AAACGCGTCAAACGCGAGACGAAAAGTTTGGTGGATTGGGCTCGGCTCAG

               551    -    601
UN13646        --> GGTAACGGCTAGAGCGGTCTCGGCTAAGCGTTTAGGGCTTGTTTGTATGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX748616       <-- GGTAACGGCTAGAGCGGTCTCGGCTAAGCGTTTAGGGCTTGTTTGTATGG  Raphanus raphanistrum subsp. maritimus
FD971170       <-- GGTAACGGCTAGAGCGGTCTCGGCTAAGCGTTTAGGGCTTGTTTGTATAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX772396       <-- GGTAACGGCTAGAGCGGTCTCGGCTAAGCGTTTAGGGCTTGTTTGTATGG  Raphanus raphanistrum subsp. landra
FD544005       <-- GGTAACGGCTAGAGCGGTCTCGGCTAAGCGTTTAGGGCTTGTTTGTATAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD973013       <-- GGTAACGGCTAGAGCGGTCTCGGCTAAGCGTTTAGGGCTTGTTTGTATAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX749247       <-- GGTAACGGCTAGAGCGGTCTCGGCTAAGCGTTTAGGGCTTGTTTGTATGG  Raphanus raphanistrum subsp. maritimus
EW716792       <-- GGTAACGGCTAGAGTGGTCTCGGCTAAGCGTTTAGGGCTTGTTTGTATAG  Raphanus sativus var. oleiformis
FD540949       <-- GGTAACGGCTAGAGCGGTCTCGGCCAAGCGTTTAGGGCTTGTTTGTATAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FY428192       --> GGTTACGGCTAGAGCGGTCTCGGCTAAGCGTTTAGGGCTTGTTTGTATGG  Raphanus sativus cv GSK3-1
EX752500       --> GGTAACGGCTAGAGCGGTCTCGGCTAAGCGTTTAGGGCTTGTTTGTATGG  Raphanus raphanistrum subsp. maritimus
FD539706       --> GGTAACGGCTAGAGCGGTCTCGGCTAAGCGTTTAGGGCTTGTTTGTATAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX752988       --> GGTAACGGCTAGAGCGGTCTCGGCTAAGCGTTTAGGGCTTGTTTGTATGG  Raphanus raphanistrum subsp. maritimus

               601    -    651
UN13646        --> CGTTTGCGTAGGCTGAGAGGGAGTGGAAGCACACGGCTGGGTATGTGGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX748616       <-- CGTTTGCGTAGGCTGAGAGGGAGTGGAAGCACACGGCTGGGTATGTGGTG
FD971170       <-- CGTTTGCGTAGGCTGAGAGGGAGTGGAAGCACACGGCTGGGTATGTGGTG
EX772396       <-- CGTTTGCGTAGGCTGAGAGGGAGTGGAAGCACACGGCTGGGTATGTGGTG
FD544005       <-- CGTTTGCGTAGGCTGAGAGGGAGTGGAAGCACACGGCTGGGTATGTGGTG
FD973013       <-- CGTTTGCGTAGGCTGAGAGGGAGTGGAAGCACACGGCTGGGTATGTGGTG
EX749247       <-- CGTTTGCGTAGGCTGAGAGGGAGTGGAAGCACACGGCTGGGTATGTGGTG
EW716792       <-- CGTTTGCGTAGGCTGAGAGGGAGTGGAAGCACACGGCTGGGTATGTGGTG
FD540949       <-- CGTTTGCGTAGGCTGAGAGGGAGTGGAAGCACACGGCTGGGTATGTGGTG
FY428192       --> CGTTTGCGTAGGCTGAGAGGGAGTGGAAGCACACGGCTGGGTATGTGGTG
EX752500       --> CGTTTGCGTAGGCTGAGAGGGAGTGGAAGCACACGGCTGGGTATGTGGTG
FD539706       --> CGTTTGCGTAGGCTGAGAGGGAGTGGAAGCACACGGCTGGGTATGTGGTG
EX752988       --> CGTTTGCGTAGGCTGAGAGGGAGTGGAAGCACACGGCTGGGTATGTGGTG

               651    -    701
UN13646        --> GTTTTGCAAGAGGATTGGATGAAGTTCACGGCTTTGTTGGAGGCTCCAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX748616       <-- GTTTTGCAAGAGGATTGGATGAAGTTCACGGCTTc...............
FD971170       <-- GTTTTGCAAGAAGATTGGATGAAGTTCACGGCTTTGTTGGAGGCTCCAGC
EX772396       <-- GTTTTGCAAGAGGATTGGATGAAGTTCACGGCTTTGTTGGAGGCTCCAGC
FD544005       <-- GTTTTGCAAGA-AATTGGATGAAGTTCACGGCTTTGTTGGAGGCTCCAGC
FD973013       <-- GTTTTGCAAGAAGATTGGATGAAGTTCACGGCTTTGTTGGAGGCTCCAGC
EX749247       <-- GTTTTGCAAGAGGATTGGATGAAGTTCACGGCTTTGTTGGAGGCTCCAGC
EW716792       <-- GTTTTGCAAGAGGATTGGATGAAGTTCACGGCTTTGTTGGAGGCTCCAGC
FD540949       <-- GTTTTGCAAGAAGATTGGATGAAGTTCACGGCTTTGTTGGAGGCTCCAGC
FY428192       --> GTTTTGCAAGAGGATTGGATGAAGTTCACGGCTTTGTTGGAGGCTCCAGC
EX752500       --> GTTTTGCAAGAGGATTGGATGAAGTTCACGGCTTc...............
FD539706       --> GTTTTGCAAGA-AATTGGATGAAGTTCACGGCTTTGTTGGAGGCTCCAGC
EX752988       --> GTTTTGCAAGAGGATTGGATGAAGTTCACGGCTTTGTTGGAGGCTCCAGC

               701    -    751
UN13646        --> CCGTGAGGCTGCGGTGGCGGCAGTGAGCGCCGGCGAGAAGAAGAAGAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX748616       <-- ..................................................
FD971170       <-- CCGTGAGGCTGCGGTGGCGGCAGTGAGCGCCGGCGAGAAGAAGAAGAAGA
EX772396       <-- CCGTGAGGCTGCGGTGGCGGCAGTGAGCGCCGGCGAGAAGAAGAAGGAGA
FD544005       <-- CCGTGAGGCTGCGGTGGCGGCAGTGAGCGCCGGCGAGAAGAAGAAGAAGA
FD973013       <-- CCGTGAGGCTGCGGTGGCGGCAGTGAGCGCCGGCGAGAAGAAGAAGAAGA
EX749247       <-- CCGTGAGGCTACGGTGGCGGCAGTGAGCGCCGGCGAGAAGAAGAAGGAGA
EW716792       <-- CCGTGAGGCTGCGGTGGCGGCAGTGAGCGCCGGCGAGAAGAAGAAGGAGA
FD540949       <-- CCGTGAGGCTGCGGTGGCGGCAGTGAGCGCCGGCGAGAAGAAGAA---GA
FY428192       --> CCGTGAGGCTGCGGTGGCGGCAGTGAGCGCCGGCGAGAAGAAGAAGAAGA
EX752500       --> ..................................................
FD539706       --> CCGTGAGGCTGCGGTGGCGGCAGTGAGCGCCGGCGAGAAGAAGAAGA...
EX752988       --> CCGTGAGGCTAC-GTGGCGGCAGTGAGCGCCGGCGAGAAGAAGAAGA-GA

               751    -    801
UN13646        --> TTGAGAGGATTAGAAAGAGAGTTTGGTTTAGTTTTGCCATTGGTGTTTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX748616       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD971170       <-- TTGAGAGAATTAGAAAGAGAGTTTGGTTTAGTTTTGCCATTGGTGTTTCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX772396       <-- TTGAGAGGATTAGAAAGAGAGTTTGGTTTAGTTTTGCCATTGGTGTTTCT  Raphanus raphanistrum subsp. landra
FD544005       <-- TTGAGAGAATTAGAAAGAGAGTTTGGTTTAGTTTTGCCATTGGTGTTTCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD973013       <-- TTGAGAGAATTAGAAAGAGAGTTTGGTTTAGTTTTGCCATTGGTGTTTCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX749247       <-- TTGAGAGGATTAGAAAGAGAGTTTGGTTTAGTTTTGCCATTGGTGTTTCT  Raphanus raphanistrum subsp. maritimus
EW716792       <-- TTGAGAGGATAAGAAAGAGAGTTTGGTTTAGTTTTGCCATTGGTGTTTCT  Raphanus sativus var. oleiformis
FD540949       <-- TTGAGAGAATTAGAAAGAGAGTTTGGTTTAGTTTTGCCATTGGTGTTTCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FY428192       --> TTGAGAGGATTAGAAAGAGAGTTTGGTTTAGTTTTGCCATTGGTGTTTCT  Raphanus sativus cv GSK3-1
EX752500       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD539706       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX752988       --> TTGAGAGGAT-AGAAAGAGAGTT...........................  Raphanus raphanistrum subsp. maritimus

               801    -    851
UN13646        --> TGTAAGAAAGCTAGATAGAAAGTGAAAGAATTGAGTGTCCC.
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX748616       <-- ..........................................
FD971170       <-- TGTAAGAAAGCTAGATAGAAAGTGAAAGAATTGAGTGTgtcc
EX772396       <-- TGTAAGAAAGCTAGATAGGAAGTc..................
FD544005       <-- TGTAAGAAAGCTAGATAGAAAGTGAAAGAATTGAGTGTCC..
FD973013       <-- TGTAAGAAAGCTAGATAGAAAGTGAAAGAATTGAGTGTCC..
EX749247       <-- TGTAAGAAAGCTAGATAGGAAGTGAGAGAATTGAGTGTCC..
EW716792       <-- TGTAAGAAAGCTAGAGAGAAAGTGAGAGAATTGAGTGTgtcc
FD540949       <-- TGTAAGAAAACTAGATAGAAAGTGAAAGAATTGAGTGTCCC.
FY428192       --> TGTA......................................
EX752500       --> ..........................................
FD539706       --> ..........................................
EX752988       --> ..........................................