1      -     51
UN13654        --> GGCCTCGACGATGTCAAGGTGCGGTACAGACCAAACACACCTCTTGTCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD552482       <-- ..................................................
EV570502       <-- ..................................................
EV570503       <-- ..................................................
EX761202       <-- ..................................................
FD545825       <-- ..................................................
FD528970       <-- ..................................................
FD961081       <-- ..................................................
FD549797       --> GGCCTCGACGATGTCAAGGTGCGGTACAGACCAAACACACCTCTTGTCCT
EV565188       --> ..................................................
EV565189       --> ..................................................
FD532527       --> ..................................................
FD965301       --> ..................................................

               51     -    101
UN13654        --> CAAGGGGCTTACTATAGACATCAAAGGAGGAGAGAAGGTTGGTGTGGTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD552482       <-- ..AGGGACTTACTATAGACATCAAAGGAGGAGAGAAGGTTGGTGTGGTTG
EV570502       <-- ........gTACCATAGACATCAAAGGAGGAGAGAAGGTTGGTGTGGTTG
EV570503       <-- ........gTACCATAGACATCAAAGGAGGAGAGAAGGTTGGTGTGGTTG
EX761202       <-- ..................................................
FD545825       <-- ..................................................
FD528970       <-- ..................................................
FD961081       <-- ..................................................
FD549797       --> CAAGGGGCTTACCATAGACATCAAAGGAGGAGAAAAGGTTGGTGTGGTTG
EV565188       --> ........gTACCATAGACATCAAAGGAGGAGAGAAGGTTGGTGTGGTTG
EV565189       --> ..................................................
FD532527       --> ..................................................
FD965301       --> ..................................................

               101    -    151
UN13654        --> GAAGAACAGGAAGTGGTAAATCGACTTTGATTCAGGTCTTGTTCAGACTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD552482       <-- GAAGAACAGGAAGTGGTAAATCGACTTTGATTCAGGTCTTGTTCAGACTT
EV570502       <-- GAAGAACAGGAAGTGGTAAATCGACTTTGATTCAGGTCTTGTTCAGACTT
EV570503       <-- GAAGAACAGGAAGTGGTAAATCGACTTTGATTCAGGTCTTGTTCAGACTT
EX761202       <-- ............................GATTCAGGTCTTGTTCAGACTT
FD545825       <-- ..................................................
FD528970       <-- ..................................................
FD961081       <-- ..................................................
FD549797       --> GAAGGACAGGAAGTGTTAAATCGACTTTGATTCAGGTCTTGTTCAGACTT
EV565188       --> GAAGAACAGGAAGTGGTAAATCGACTTTGATTCAGGTCTTGTTCAGACTT
EV565189       --> ....................................TCTTGTTCAGACTT
FD532527       --> ..................................................
FD965301       --> ..................................................

               151    -    201
UN13654        --> GTGGAACCGTCCGGTGGGAAGATAATCATCGACGG-AATCGATATCTGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD552482       <-- GTGGAACCGTCCGGTGGGAAGATAATCATCGACGG-AATCGATATCTGCA
EV570502       <-- GTGGAACCGTCCGGTGGGAAGATAATCATCGACGGGAATCGATATCTGCA
EV570503       <-- GTGGAACCGTCCGGTGGGAAGATAATCATCGACGG-AATCGATATCTGCA
EX761202       <-- GTGGAACCGTCTGGTGGGAAGATAATCATCGATGG-AATCGATATCTGCA
FD545825       <-- ..................................................
FD528970       <-- ..................................................
FD961081       <-- ..................................................
FD549797       --> GTGGAACCGTCTGGTGGGAAGATAATCATCGATGG-AATCGATATCTGCA
EV565188       --> GTGGAACCGTCCGGTGGGAAGATAATCATCGACGG-AATCGATATCTGCA
EV565189       --> GTGGAACCGTCCGGTGGGAAGATAATCATCGACGG-AATCGATATCTGCA
FD532527       --> ..................................................
FD965301       --> ..................................................

               201    -    251
UN13654        --> CTTTGGGACTTCATGATCTTAGGTCAAGATTCGGTATCATCCCTCAAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD552482       <-- CTTTGGGACTTC---ATCTTAGGTCAAGATTCGGTATCATCCCTCAAGAA
EV570502       <-- CTTTGGGACTTCATGATCTTAGGTCAAGATTCGGTATCATCCCTCAAGAA
EV570503       <-- CTTTGGGACTTCATGATCTTAGGTCAAGATTCGGTATCATCCCTCAAGAA
EX761202       <-- CTTTGGGACTTCATGATCTTAGGTCAAGATTCGGTATCATCCCTCAAGAA
FD545825       <-- ..............................TCGGTATCATCCCTCAAGAA
FD528970       <-- ..................................................
FD961081       <-- ..................................................
FD549797       --> CTTTGGGACTTCATGATCTTAGGTCAAGATTCGGTATCATCCCTCAAGAA
EV565188       --> CTTTGGGACTTCATGATCTTAGGTCAAGATTCGGTATCATCCCTCAAGAA
EV565189       --> CTTTGGGACTTCATGATCTTAGGTCAAGATTCGGTATCATCCCTCAAGAA
FD532527       --> ..................................................
FD965301       --> ..................................................

               251    -    301
UN13654        --> CCTGTTCTCTTCGAAGGAACTGTAAGGAGCAACATTGATCCTACAGAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD552482       <-- CCTGTTCTCTTCGAAGGAACTGTAAGGAGCAACATTGATCCTACAGAGAA
EV570502       <-- CCTGTTCTCTTCGAAGGAACTGTAAGGAGCAACATTGATCCTACAGAGAA
EV570503       <-- CCTGTTCTCTTCGAAGGAACTGTAAGGAGCAACATTGATCCTACAGAGAA
EX761202       <-- CCTGTTCTCTTCGAAGGAACTGTCAGGAGCAACATTGATCCTACAGAGAA
FD545825       <-- CCTGTTCTCTTCGAAGGAACTGTAAGGAGCAACATTGATCCTACAGAGAA
FD528970       <-- ..................................................
FD961081       <-- ..................................................
FD549797       --> CCTGTTCTCTTCGAAGGAACTGTAAGGAGCAACATTGATCCTACAGAGAA
EV565188       --> CCTGTTCTCTTCGAAGGAACTGTAAGGAGCAACATTGATCCTACAGAGAA
EV565189       --> CCTGTTCTCTTCGAAGGAACTGTAAGGAGCAACATTGATCCTACAGAGAA
FD532527       --> ..................................................
FD965301       --> ..................................................

               301    -    351
UN13654        --> ATACTCTGATGAAGAAATCTGGAAGATTCTCGAGCGATGTCAACTTAAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD552482       <-- ATACTCTGATGAAGAAATCTGGAAGAGTCTCGAGCGATGTCAACTTAAGG
EV570502       <-- ATACTCTGATGAAGAAATCTGGAAGATTCTCGAGCGATGTCAACTTAAGG
EV570503       <-- ATACTCTGATGAAGAAATCTGGAAGATTCTCGAGCGATGTCAACTTAAGG
EX761202       <-- ATACTCTGACGAAGAAATCTGGAAGAGTCTTGAGCGATGTCAACTTAAGG
FD545825       <-- ATACTCTGATGAAGAAATCTGGAAGAGTCTGGAGCGATGTCAACTTAAGG
FD528970       <-- ..................................................
FD961081       <-- ..................................................
FD549797       --> ATACTCTGATGAAGAAATCTGGAAGAGTCTGGAGCGATGTCAACTTAAGG
EV565188       --> ATACTCTGATGAAGAAATCTGGAAGATTCTCGAGCGATGTCAACTTAAGG
EV565189       --> ATACTCTGATGAAGAAATCTGGAAGATTCTCGAGCGATGTCAACTTAAGG
FD532527       --> ..................................................
FD965301       --> ..................................................

               351    -    401
UN13654        --> AGGTTGTTTCATCCAAGCCCGGGAAGCTTGATTCTCTCGTGGCGGATAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD552482       <-- AGGTTGTTTCATCCAAGCCCGGGAAGCTTGATTCTCTCGTGGCGGATAGT  Raphanus raphanistrum subsp. landra
EV570502       <-- AGGTTGTTTCATCCAAGCCCGGGAAGCTTGATTCTCTCGTGGCGGATAGT  Raphanus raphanistrum subsp. landra
EV570503       <-- AGGTTGTTTCATCCAAGCCCGGGAAGCTTGATTCTCTCGTGGCGGATAGT  Raphanus raphanistrum subsp. landra
EX761202       <-- AGGTTGTTTCATCCAAGCCCGGGAAGCTTGATTCTCTTGTGGCGGATAGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD545825       <-- AGGTTGTTTCATCCAAGCCCGGGGAGCTTGATTCTCTTGTGGCGGATAGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD528970       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD961081       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD549797       --> AGGTTGTTTCATCCAAGCCCGGGGAGCTTGATTCTCTTGTGGCGGATAGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV565188       --> AGGTTGTTTCATCCAAGCCCGGGAAGCTTGATTCTCTCGTGGCGGATAGT  Raphanus raphanistrum subsp. landra
EV565189       --> AGGTTGTTTCATCCAAGCCCGGGAAGCTTGATTCTCTCGTGGCGGATAGT  Raphanus raphanistrum subsp. landra
FD532527       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD965301       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               401    -    451
UN13654        --> GGTGAGAATTGGAGTGTTGGTCAGAGACAGTTACTGTGTTTGGGAAGGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD552482       <-- GGTGAGAATTGGAGTGTTGGTCAGAGACAGTTACTGTGTTTGGGAAGGGT
EV570502       <-- GGTGAGAATTGGAGTGTTGGTCAGAGACAGTTACTGTGTTTGGGAAGGGT
EV570503       <-- GGTGAGAATTGGAGTGTTGGTCAGAGACAGTTACTGTGTTTGGGAAGGGT
EX761202       <-- GGTGAGAATTGGAGTGTTGGTCAAAGACAGTTACTCTGTTTGGGAAGGGT
FD545825       <-- GGTGAGAACTGGAGTGTTGGTCAGAGACAGTTACTGTGTTTGGGAAGGGT
FD528970       <-- ..................................................
FD961081       <-- ..................................................
FD549797       --> GGTGAGAACTGGAGTGTTGGTCAGAGACAGTTACTGTGTTTGGGAAGGGT
EV565188       --> GGTGAGAATTGGAGTGTTGGTCAGAGACAGTTACTGTGTTTGGGAAGGGT
EV565189       --> GGTGAGAATTGGAGTGTTGGTCAGAGACAGTTACTGTGTTTGGGAAGGGT
FD532527       --> ..................................................
FD965301       --> ..................................................

               451    -    501
UN13654        --> TATGCTGAAACGGTGCCGGATTCTGTTTTTGGATGAAGCAACTGCGTCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD552482       <-- TATGCTGAAACGGTGCCGGATTCTGTTTTTGGATGAAGCAACTGCGTCAG  Raphanus raphanistrum subsp. landra
EV570502       <-- TATGCTGAAACGGTGCCGGATTCTGTTTTTGGATGAAGCAACTGCGTCAG  Raphanus raphanistrum subsp. landra
EV570503       <-- TATGCTGAAACGGTGCCGGATTCTGTTTTTGGATGAAGCAACTGCGTCAG  Raphanus raphanistrum subsp. landra
EX761202       <-- TATGCTGAAACGGTGCCGGATTCTGTTTTTGGATGAAGCAACTGCTTCGG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD545825       <-- TATGCTGAAACGGTGCCGGATTCTGTTTTTGGATGAAGCAGCTGCTTCAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD528970       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD961081       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD549797       --> TATGCTGAAACGGTGCCGGATTCTGTTTTTGGATGAAGCAGCTGCTTCAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV565188       --> TATGCTGAAACGGTGCCGGATTCTGTTTTTGGATGAAGCAACTGCGTCAG  Raphanus raphanistrum subsp. landra
EV565189       --> TATGCTGAAACGGTGCCGGATTCTGTTTTTGGATGAAGCAACTGCGTCAG  Raphanus raphanistrum subsp. landra
FD532527       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD965301       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               501    -    551
UN13654        --> TTGATTCGCAGACTGATGCTATGATCCAGAAGATCATAAGGGAGGACTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD552482       <-- TTGATTCGCAGACTGATGCTATGATCCAGAAGATCATAAGGGAGGACTTC
EV570502       <-- TTGATTCGCAGACTGATGCTATGATCCAGAAGATCATAAGGGAGGACTTC
EV570503       <-- TTGATTCGCAGACTGATGCTATGATCCAGAAGATCATAAGGGAGGACTTC
EX761202       <-- TTGATTCGCAGACTGATGCTATGATCCAGAAGATTATAAGGGAGGACTTC
FD545825       <-- TTGATTCGCAGACTGATGCTATGATCCAGAAGATAATCAGGGAGGACTTC
FD528970       <-- .....................gGATCCAGAAGATCATAAGGGAGGACTTC
FD961081       <-- .....................gGATCCAGAAGATCATAAGGGAGGACTTC
FD549797       --> TT................................................
EV565188       --> TTGATTCGCAGACTGATGCTATGATCCAGAAGATCATAAGGGAGGACTTC
EV565189       --> TTGATTCGCAGACTGATGCTATGATCCAGAAGATCATAAGGGAGGACTTC
FD532527       --> .....................gGATCCAGAAGATCATAAGGGAGGACTTC
FD965301       --> .....................gGATCCAGAAGATCATAAGGGAGGACTTC

               551    -    601
UN13654        --> TCGTCGTGTACCATCATCAGCATAGCTCATAGGATTCCAACGGTTATGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD552482       <-- TCGTCGTGTACCATCATCAGCATAGCTCATAGGATTCCAACGGTTATGGA
EV570502       <-- TCGTCGTGTACCATCATCAGCATAGCTCATAGGATTCCAACGGTTATGGA
EV570503       <-- TCGTCGTGTACCATCATCAGCATAGCTCATAGGATTCCAACGGTTATGGA
EX761202       <-- TCGTCGTGTACCATCATCAGCATAGCTCATAGGATTCCAACGGTTATGGA
FD545825       <-- TCGTCTTGTACTATCATCAGCATTGCTCATAGGATTCCAACGGTTATGGA
FD528970       <-- TCGTCGTGTACCATCATCAGCATAGCTCATAGGATTCCAACGGTTATGGA
FD961081       <-- TCGTCGTGTACCATCATCAGCATAGCTCATAGGATTCCAACGGTTATGGA
FD549797       --> ..................................................
EV565188       --> TCGTCGTGTACCATCATCAGCATAGCTCATAGGATTCCAACGGTTATGGA
EV565189       --> TCGTCGTGTACCATCATCAGCATAGCTCATAGGATTCCAACGGTTATGGA
FD532527       --> TCGTCGTGTACCATCATCAGCATAGCTCATAGGATTCCAACGGTTATGGA
FD965301       --> TCGTCGTGTACCATCATCAGCATAGCTCATAGGATTCCAACGGTTATGGA

               601    -    651
UN13654        --> CTGTGATCGTGTTCTTGTTATAGACGCAGGAAAAGCGAAAGAGTATGATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD552482       <-- CTGTGATCGTGTTCTTGTTATAGACGCAGGAAAAGCGAAAGAGTATGATA
EV570502       <-- CTGTGATCGTGTTCTTGTTATAGACGCAGGAAAAGCGAAAGAGTATGATA
EV570503       <-- CTGTGATCGTGTTCTTGTTATAGACGCAGGAAAAGCGAAAGAGTATGATA
EX761202       <-- CTGTGATCGTGTTCTTGTTATAGACGCAGGAAAAGCGAAAGAGTATGATA
FD545825       <-- CTGTGATCGTGTTCTTGTTATAGACGCAGGAAAAGCGAAAGAGTATGATA
FD528970       <-- CTGTGATCGTGTTCTTGTTATAGACGCAGGAAAAGCGAAAGAGTATGATA
FD961081       <-- CTGTGATCGTGTTCTTGTTATAGACGCAGGAAAAGCGAAAGAGTATGATA
FD549797       --> ..................................................
EV565188       --> CTGTGATCGTGTTCTTGTTATAGACGCAGGAAAAGCGAAAGAGTATGATA
EV565189       --> CTGTGATCGTGTTCTTGTTATAGACGCAGGAAAAGCGAAAGAGTATGATA
FD532527       --> CTGTGATCGTGTTCTTGTTATAGACGCAGGAAAAGCGAAAGAGTATGATA
FD965301       --> CTGTGATCGTGTTCTTGTTATAGACGCAGGAAAAGCGAAAGAGTATGATA

               651    -    701
UN13654        --> GTCCGGTTCGTTTGCTGGAGAGACGGTCGTTGTTTGCTGCATTGGTTCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD552482       <-- GTCCGGTTCGTTTGCTGGAGAGACGGTCGTTGTTTGCTGCATTGGTTCAA
EV570502       <-- GTCCGGTTCGTTTGCTGGAGAGACGGTCGTTGTTTGCTGCATTGGTTCAA
EV570503       <-- GTCCGGTTCGTTTGCTGGAGAGACGGTCGTTGTTTGCTGCATTGGTTCAA
EX761202       <-- GTCCGGTTCGTTTGCTGGAGAGACGGTCGTTGTTTGCTGCATTGGTTCAA
FD545825       <-- GTCCGGTTCGTTTGCTGGAGAGACGGTCGTTGTTTGCTGCATTGGTTCAA
FD528970       <-- GTCCGGTTCGTTTGCTGGAGAGACGGTCGTTGTTTGCTGCATTGGTTCAA
FD961081       <-- GTCCGGTTCGTTTGCTGGAGAGACGGTCGTTGTTTGCTGCATTGGTTCAA
FD549797       --> ..................................................
EV565188       --> GTCCGGTTCGTTTGCTGGAGAGACGGTCGTTGTTTGCTGCATTGGTTCAA
EV565189       --> GTCCGGTTCGTTTGCTGGAGAGACGGTCGTTGTTTGCTGCATTGGTTCAA
FD532527       --> GTCCGGTTCGTTTGCTGGAGAGACGGTCGTTGTTTGCTGCATTGGTTCAA
FD965301       --> GTCCGGTTCGTTTGCTGGAGAGACGGTCGTTGTTTGCTGCATTGGTTCAA

               701    -    751
UN13654        --> GAGTATGCTCTCCGGTCTGCCGGAATATGAAACCATTGTCTTCTTCATTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD552482       <-- GAGTATGCTCTCCGGTCTGCCGGAATATGAAACCATTGTCTTCTTCATTT
EV570502       <-- GAGTATGCTCTCCGGTCTGCCGGAATATGAAACCATTGTCTTCTTCATTT
EV570503       <-- GAGTATGCTCTCCGGTCTGCCGGAATATGAAACCATTGTCTTCTTCATTT
EX761202       <-- GAGTATGCTCTCCGGTCTGCCGGAATATGAAACCATTGTCTTCTTCATTT
FD545825       <-- GAGTATGCTCTCCGGTCTGCCGGAATATGAAACCATTGTCTTCTTCATTT
FD528970       <-- GAGTATGCTCTCCGGTCTGCCGGAATATGAAACCATTGTCTTCTTCATTT
FD961081       <-- GAGTATGCTTTCCGGTCTGCCGGAATATGAAACCATTGTTTTTTTCATTT
FD549797       --> ..................................................
EV565188       --> GAGTATGCTCTCCGGTCTGCCGGAATATGAAACCATTGTCTTCTTCATTT
EV565189       --> GAGTATGCTCTCCGGTCTGCCGGAATATGAAACCATTGTCTTCTTCATTT
FD532527       --> GAGTATGCTCTCCGGTCTGCCGGAATATGAAACCATTGTCTTCTTCATTT
FD965301       --> GAGTATGCTCTCCGGTCTGCCGGAATATGAAACCATTGTCTTCTTCATTT

               751    -    801
UN13654        --> TGTTTCTGTTAGCTGATATCAACATAAACAGACGTGTTGTCTTTGTATTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD552482       <-- TGTTTCTGTTAGCTGATATCAACATAAACAGACGTGTTGTCTTTGTATTT
EV570502       <-- TGTTTCTGTTAGCTGATATCAACATAAACAGACGTGTTGTCTTTGTATTT
EV570503       <-- TGTTTCTGTTAGCTGATATCAACATAAACAGACGTGTTGTCTTTGTATTT
EX761202       <-- TGTTTCTGTTAGTTGATATCAACATAAACAGACGTGTTGTCTTTGTATTT
FD545825       <-- TGTTTCTGTTAGCTGATATCAACATAAACAGACGTGTTGTCTTTGTATTT
FD528970       <-- TGTTTCTGTTAGCTGATATCAACATAAACAGACGTGTTGTCTTTGTATTT
FD961081       <-- TGTTTCTGTTAGCTGATATCAACATAAACAGACGTGTTGTCTTTGTATTT
FD549797       --> ..................................................
EV565188       --> TGTTTCTGTTAGCTGATATCAACATAAACAGACGTGTTGTCTTTGTATTT
EV565189       --> TGTTTCTGTTAGCTGATATCAACATAAACAGACGTGTTGTCTTTGTATTT
FD532527       --> TGTTTCTGTTAGCTGATATCAACATAAACAGACGTGTTGTCTTTGTATTT
FD965301       --> TGTTTCTGTTAGCTGATATCAACATAAACAGACGTGTTGTCTTTGTATTT

               801    -    851
UN13654        --> TGATTCAGAATCTCTGACGTTTGATGTTGAATTTTCAATAAAACTTCTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD552482       <-- TGATTCAGAATCTCTGACGTTTGATGTTGAATTTTCAATAAAACTTCTAA
EV570502       <-- TGATTCAGAATCTCTGACGTTTGATGTTGAATT.................
EV570503       <-- TGATTCAGAATCTCTGACGTTTGATGTTGAATTTTCAATAAAACTTCTAA
EX761202       <-- TGATTCAGAATCTCTGACGTTTGATGTTGAATTTTCAATAAAACTTCTAA
FD545825       <-- TGATTCAGAATCTCTGACGTTTGATGTTGAATTTTCAATAAAACTTCTAA
FD528970       <-- TGATTCAGAATTTCTGACGTTTGATGTTGAATTTTCAATAAAACTTCTAA
FD961081       <-- TGATTCAGAATTTCTGACGTTTGATGTTGAATTTTCAATAAAACTTTTAA
FD549797       --> ..................................................
EV565188       --> TGATTCAGAATCTCTGACGTTTGATGTTGAATTTTCAATAAAACTTCTAA
EV565189       --> TGATTCAGAATCTCTGACGTTTGATGTTGAATTTTCAATAAAACTTCTAA
FD532527       --> TGATTCAGAATCTCTGACGTTTGATGTTGAATTTTCAATAAAACTTCTAA
FD965301       --> TGATTCAGAATCTCTGACGTTTGATGTTGAATTTTCAATAAAACTTCTAA

               851    -    901
UN13654        --> TAATAACAAGTTTCATTCGGGCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~
FD552482       <-- TAATAACAAGTTTCATTCGGGCc.
EV570502       <-- ........................
EV570503       <-- TAATAACAAGTTTCATTCGGGCT.
EX761202       <-- TAATAACAAGTTTCATTCGGGCT.
FD545825       <-- TAATAACAAGTTTCATTCGGGCTC
FD528970       <-- TAATAACAAGTTTCATTCGGGCT.
FD961081       <-- TAATAACAAGTTTCATTCGGGCT.
FD549797       --> ........................
EV565188       --> TAATAACAAGTTTCATTC......
EV565189       --> TAATAACAAGTTTCATTCGGGCT.
FD532527       --> TAATAACAAGTTTCATTCGGGCT.
FD965301       --> TAATAACAAGTTTCATTCGGGCT.