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Alignment for radish unigene UN13696

               1      -     51
UN13696        --> GGACAGGCACAGACACAGTTCTCGGTCGGTTCATCGTACATCGGTAATAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV573092       <-- ..................................................
EV573451       <-- ..................................................
EX767687       <-- ..................................................
EW739527       <-- ..................................................
FD951119       <-- ..................................................
EX767599       <-- ..................................................
FD944841       <-- ..................................................
FY441147       <-- ..................................................
FD977109       <-- ..................................................
EX763634       --> GGACAGGCACAGACACAGTTCTCGGTCGGTTCATCGTACATCGGTAATAA
FD940673       --> ....ggaCACAGACACAGTTCTCGGTCGGTTCATCGTACATCGGTAATAA
EV568340       --> .......ggaaaACACAGCTCTCGGTCGGTTCATCGTACATCGGTAATAA
EV568809       --> .......ggaaaACACAGCTCTCGGTCGGTTCATCGTACATCGGTAATAA
EW735436       --> .............CACAGTTCTCGGTCGGTTCATCGTACATCGGTAATAA
EX774011       --> ..................................................
EY938818       --> ..................................................
FD559145       --> ..................................................

               51     -    101
UN13696        --> AAAA-TCTCTCCTTTTTCATATTTTTTTTCCTCTAATAATTTCTGTGGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV573092       <-- ...............TTCATATTTGTTTTCCTCTAATAATTTCTGTGGCA
EV573451       <-- ..................................................
EX767687       <-- ..................................................
EW739527       <-- ..................................................
FD951119       <-- ..................................................
EX767599       <-- ..................................................
FD944841       <-- ..................................................
FY441147       <-- ..................................................
FD977109       <-- ..................................................
EX763634       --> AAAA-TCTCTCCTTTTTCATATTTTTTTTCCTCTAATAATTTCTGTGGCA
FD940673       --> AAAA-TCTCTCCTTTTTCATATTTTTTTTCCTCTAATAATTTCTGTGGCA
EV568340       --> AAAAATCTCTCCTTTTTCATATTTGTTTTCCTCTAATAATTTCTGTGGCA
EV568809       --> AAAAATCTCTCCTTTTTCATATTTGTTTTCCTCTAATAATTTCTGTGGCA
EW735436       --> AAAA-TCTCTCCTTTTTCATATTTTTTTTCCTCTAATAATTTCTGTGGCA
EX774011       --> ..........................gggCCTCTAATAATTTCTGTGGCA
EY938818       --> ..........................................ggGTGGCA
FD559145       --> ..................................................

               101    -    151
UN13696        --> CGAATTGAAAAAGCAAAGGAAAACGTAAATGGGTTCGTACTCAATAGCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV573092       <-- CGAATTGAAAAAGCAAAGGAAAACGTAAATGGGT-CGTACTCAATAGCCA
EV573451       <-- .....................................TACTCAATAGCCA
EX767687       <-- ..................................................
EW739527       <-- ..................................................
FD951119       <-- ..................................................
EX767599       <-- ..................................................
FD944841       <-- ..................................................
FY441147       <-- ..................................................
FD977109       <-- ..................................................
EX763634       --> CGAATTGAAAAAGCAAAGGAAAACGTAAATGGGTTCGTACTCAATAGCCA
FD940673       --> CGAATTGAAAAAGCATAGGAAAACGTAAATGGGTTCGTACTCAATAGCCA
EV568340       --> CGAATTGAAAAAGCAAAGGAAAACGTAAATGGGTTCGTACTCAATAGCCA
EV568809       --> CGAATTGAAAAAGCAAAGGAAAACGTAAATGGGTTCGTACTCAATAGCCA
EW735436       --> CGAATTGAAAAAGCAAAGGAAAACGTAAATGGGTTCGTACTCAATAGCCA
EX774011       --> CGAATTGAAAAAGCAAAGGAAAACGTAAATGGGTTCGTACTCAATAGCCA
EY938818       --> CGAATTGAAAAAGCAAAGGAAAACGTAAATGGGTTCGTACTCAATAGCCA
FD559145       --> ....gTGAAAAAGCAAAGGAAAACGTAAATGGGTTCGTACTCAATAGCCA

               151    -    201
UN13696        --> GTGCTATATCTCGATTTGCGCCTCTAACCCGCTTCGTTAAACCTTTTTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV573092       <-- GTGCTATATCTCGATTTGCGCCTCTAACCCGCTTCGTTAAACCTTTTTCT
EV573451       <-- GTGCTATATCTCGATTTGCGCCTCTAACCCGCTTCGTTAAACCTTTTTCT
EX767687       <-- ..................................................
EW739527       <-- ..................................................
FD951119       <-- ..................................................
EX767599       <-- ..................................................
FD944841       <-- ..................................................
FY441147       <-- ..................................................
FD977109       <-- ..................................................
EX763634       --> GTGCTATATCTCGATTTGCGTCTCTAACCCGCTTCGTTAAACCTTTTTCT
FD940673       --> GTGCTATATCTCGATTTGCGCCTCTAACCCGCTTCGTTAAACCTTTTTCT
EV568340       --> GTGCTATATCTCGATTTGCGCCTCTAACCCGCTTCGTTAAACCTTTTTCT
EV568809       --> GTGCTATATCTCGATTTGCGCCTCTAACCCGCTTCGTTAAACCTTTTTCT
EW735436       --> GTGCTATATCTCGATTTGCGCCTCTAACCCGCTTCGTTAAACCTTTTTCT
EX774011       --> GTGCTATATCTCGATTTGCGCCTCTAACCCGCTTCGTTAAACCTTTTTCT
EY938818       --> GTGCTATATCTCGATTTGCGCCTCTAGCCCGCTTCGTTAAACCTTTTTCT
FD559145       --> GTGCTATATCTCGATTTGCGCCTCTAACCCGCTTCGTTAAACCTTTTTCT

               201    -    251
UN13696        --> TACATCAATTGCCCTTGCAACAGAGCCCTGAGGCCAAAGAGATCTGATCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV573092       <-- TACATCAATTGCCCTTGCAACAGAGCCCTGAGGCCAAAGAGATCTGATCA  Raphanus raphanistrum subsp. landra
EV573451       <-- TACATCAATTGCCCTTGCAACAGAGCCCTGAGGCCAAAGAGATCTGATCA  Raphanus raphanistrum subsp. landra
EX767687       <-- ...............................GGCCAAAGAGATTTGATCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW739527       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD951119       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX767599       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD944841       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FY441147       <-- ..................................................  Raphanus sativus cv GSK3-1
FD977109       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX763634       --> TACATCAATTGCCCTTGCAACAGAGCCCTGAGGCCAAAGAGATTTGATCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD940673       --> TACATCAATTGCCCTTGCAACAGAGCCCTGAGGCCAAAGAGATTTGATCA  Raphanus sativus var. oleiformis
EV568340       --> TACATCAATTGCCCTTGCAACAGAGCCCTGAGGCCAAAGAGATCTGATCA  Raphanus raphanistrum subsp. landra
EV568809       --> TACATCAATTGCCCTTGCAACAGAGCCCTGAGGCCAAAGAGATCTGATCA  Raphanus raphanistrum subsp. landra
EW735436       --> TACATCAATTGCCCTTGCAACAGAGCCCTGAGGCCAAAGAGATTTGATCA  Raphanus sativus cv Rat-Tail Radish #3870
EX774011       --> TACATCAATTGCCCTTGCAACAGAGCCCTGAGGCCAAAGAGATCTGATCA  Raphanus raphanistrum subsp. landra
EY938818       --> TACATCAATTGCCCTTGCAACAGAGCCCTGAGGCCAAAGAGATTTGATCA  Raphanus sativus cv Early Scarlet Globe
FD559145       --> TACATCAATTGCCCTTGCAACAGAGCCCTGAGGCCAAAGAGATCTGATCA  Raphanus raphanistrum subsp. landra

               251    -    301
UN13696        --> GCTTCGTGTGTTCTCAATGGCGTTGGAAGCGAAGGAATCACCAGCAAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV573092       <-- GCTTCGTGTGTTCTCAATGGCGTTGGAAGCGAAGGAATCACCAGCAAACA  Raphanus raphanistrum subsp. landra
EV573451       <-- GCTTCGTGTGTTCTCAATGGCGTTGGAAGCGAAGGAATCACCAGCAAACA  Raphanus raphanistrum subsp. landra
EX767687       <-- GCTTCGTGTGTTCTCAATGGTGACGGAAGCGAAGGAATCACCAGCAAACA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW739527       <-- .........................GAAGCGAAGGAATCACCAGCAAACA  Raphanus sativus cv Rat-Tail Radish #3870
FD951119       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX767599       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD944841       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FY441147       <-- ..................................................  Raphanus sativus cv GSK3-1
FD977109       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX763634       --> GCTTCGTGTGTTCTCAATGGTGACGGAAGCGAAGGAATCACCAGCAAACA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD940673       --> GCTTCGTGTGTTCTCAATGGCGTCGGAAGCGAAGGAATCACCAGCAAACA  Raphanus sativus var. oleiformis
EV568340       --> GCTTCGTGTGTTCTCAATGGCGTTGGAAGCGAAGGAATCACCAGCAAACA  Raphanus raphanistrum subsp. landra
EV568809       --> GCTTCGTGTGTTCTCAATGGCGTTGGAAGCGAAGGAATCACCAGCAAACA  Raphanus raphanistrum subsp. landra
EW735436       --> GCTTCGTGTGTTCTCAATGGTGACGGAAGCGAAGGAATCACCAGCAAACA  Raphanus sativus cv Rat-Tail Radish #3870
EX774011       --> GCTTCGTGTGTTCTCAATGGCGTTGGAAGCGAAGGAATCACCAGCAAACA  Raphanus raphanistrum subsp. landra
EY938818       --> GCTTCGTGTGTTCTCAATGGCGTCGGAAGCGAAGGAATCACCGGCAAACA  Raphanus sativus cv Early Scarlet Globe
FD559145       --> GCTTCGTGTGTTCTCAATGGCGTTGGAAGCGAAGGAATCACCAGCAAACA  Raphanus raphanistrum subsp. landra

               301    -    351
UN13696        --> ATCCTGGCTTGTCAACGGTTCGTGATGAAGCTACCAAAGGGTATATCATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV573092       <-- ATCCTGGCTTGTCAACGGTTCGTGATGAAGCTACCAAAGGGTATATCATG  Raphanus raphanistrum subsp. landra
EV573451       <-- ATCCTGGCTTGTCAACGGTTCGTGATGAAGCTACCAAAGGGTATATCATG  Raphanus raphanistrum subsp. landra
EX767687       <-- ATCCTGGCTTGTCAACGGTTCGTGATGAGGCTACCAAAGGGTATATCATG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW739527       <-- ATCCTGGCTTGTCAACGGTTCGTGATGAGGCTACCAAAGGGTATATCATG  Raphanus sativus cv Rat-Tail Radish #3870
FD951119       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX767599       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD944841       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FY441147       <-- ..................................................  Raphanus sativus cv GSK3-1
FD977109       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX763634       --> ATCCTGGCTTGTCAACGGTTCGTGATGAGGCTACCAAAGGGTATATCATG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD940673       --> ATCCTGGCTTGTCAACGGTTCGTGATGAAGCTACCAAAGGGTATATCATG  Raphanus sativus var. oleiformis
EV568340       --> ATCCTGGCTTGTCAACGGTTCGTGATGAAGCTACCAAAGGGTATATCATG  Raphanus raphanistrum subsp. landra
EV568809       --> ATCCTGGCTTGTCAACGGTTCGTGATGAAGCTACCAAAGGGTATATCATG  Raphanus raphanistrum subsp. landra
EW735436       --> ATCCTGGCTTGTCAACGGTTCGTGATGAGGCTACCAAAGGGTATATCATG  Raphanus sativus cv Rat-Tail Radish #3870
EX774011       --> ATCCTGGCTTGTCAACGGTTCGTGATGAAGCTACCAACGGGTATATCATG  Raphanus raphanistrum subsp. landra
EY938818       --> ATCCTGGCTTGTCAACGGTTCGTGATGAAGCTACCAAAGGGTATATCATG  Raphanus sativus cv Early Scarlet Globe
FD559145       --> ATCCTGGCTTGTCAACGGTTCGTGATGAAGCTACCAAAGGGTATATCATG  Raphanus raphanistrum subsp. landra

               351    -    401
UN13696        --> CAGCAGACTATGTTTCGAGTGAAGGACCCTAAAGCTAGTCTTGACTTTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV573092       <-- CAGCAGACTATGTTTCGAGTGAAGGACCCTAAAGCTAGTCTTGACTTTTA  Raphanus raphanistrum subsp. landra
EV573451       <-- CAGCAGACTATGTTTCGAGTGAAGGACCCTAAAGCTAGTCTTGACTTTTA  Raphanus raphanistrum subsp. landra
EX767687       <-- CAGCAGACTATGTTTCGAGTGAAGGACCCTAAGGCTAGTCTTGACTTTTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW739527       <-- CAGCAGACTATGTTTCGAGTGAAGGACCCTAAGGCTAGTCTTGACTTTTA  Raphanus sativus cv Rat-Tail Radish #3870
FD951119       <-- .................AGTGAAGGACCCTAAAGCTAGTCTTGACTTTTA  Raphanus sativus cv Rat-Tail Radish #3870
EX767599       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD944841       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FY441147       <-- ..................................................  Raphanus sativus cv GSK3-1
FD977109       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX763634       --> CAGCAGACTATGTTTCGAGTGAAGGACCCTAAGGCTAGTCTTGACTTTTA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD940673       --> CAGCAGACTATGTTTCGAGTGAAGGACCCTAAGGCTAGTCTTGACTTTTA  Raphanus sativus var. oleiformis
EV568340       --> CAGCAGACTATGTTTCGAGTGAAGGACCCTAAAGCTAGTCTTGACTTTTA  Raphanus raphanistrum subsp. landra
EV568809       --> CAGCAGACTATGTTTCGAGTGAAGGACCCTAAAGCTAGTCTTGACTTTTA  Raphanus raphanistrum subsp. landra
EW735436       --> CAGCAGACTATGTTTCGAGTGAAGGACCCTAAGGCTAGTCTTGACTTTTA  Raphanus sativus cv Rat-Tail Radish #3870
EX774011       --> CAGCAGACTATGTTTCGAGTGAAGGACCCTAAAGCTAGTCTTGACTTTTA  Raphanus raphanistrum subsp. landra
EY938818       --> CAGCAGACTATGTTTCGAGTGAAGGACCCTAAGGCTAGTCTTGACTTTTA  Raphanus sativus cv Early Scarlet Globe
FD559145       --> CAGCAGACTATGTTTCGAGTGAAGGACCCTAAAGCTAGTCTTGACTTTTA  Raphanus raphanistrum subsp. landra

               401    -    451
UN13696        --> CTCACGTGTCCTGGGAATGTCATTGCTGAAGAGGCTAGATTTCTCTGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV573092       <-- CTCACGTGTCCTGGGAATGTCGTTGCTGAAGAGGCTAGATTTCTTTGAGA
EV573451       <-- CTCACGTGTCCTGGGAATGTCGTTGCTGAAGAGGCTAGATTTCTCTGAGA
EX767687       <-- CTCACGTGTCCTGGGAATGTCATTGCTGAAGAGGCTAGATTTCTCTGAGA
EW739527       <-- CTCACGTGTCCTGGGAATGTCATTGCTGAAGAGGCTAGATTTCTCTGAGA
FD951119       <-- CTCACGTGTCCTCGGATTGTCATTGCTGAAGAGGCTAGATTTCTCTGAGA
EX767599       <-- ...........................................TCTGAGA
FD944841       <-- ..................................................
FY441147       <-- ..................................................
FD977109       <-- ..................................................
EX763634       --> CTCACGTGTCCTGGGAATGTCATTGCTGAAGAGGCTAGATTTCTCTGAGA
FD940673       --> CTCACGTGTCCTGGGAATGTCATTGCTGAAGAGGCTAGATTTCGCTGAGA
EV568340       --> CTCACGTGTCCTGGGAATGTCGTTGCTGAAGAGGCTAGATTTCTCTGAGA
EV568809       --> CTCACGTGTCCTGGGAATGTCGTTGCTGAAGAGGCTAGATTTCTCTGAGA
EW735436       --> CTCACGTGTCCTGGGAATGTCATTGCTGAAGAGGCTAGATTTCTCTGAGA
EX774011       --> CTCACGTGTCCTGGGAATGTCATTGCTGAAGAGGCTAGATTTCTCTGAGA
EY938818       --> CTCACGTGTCCTGGGAATGTCATTGCTGAAGAGGCTAGATTTCGCTGAGA
FD559145       --> CTCACGTGTCCTGGGAATGTCATTGCTGAAGAGGCTAGATTTCTCTGAGA

               451    -    501
UN13696        --> TGAAATTCAGCTTGTACTTCGTGGGCTACGAGGATACTTCAACAGCTCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV573092       <-- TGAAATTCAGCTTGTACTTCGTGGGCTACGAGGATACTTCAACAGCTCCA
EV573451       <-- TGAAATTCAGCTTGTACTTCGTGGGCTACGAGGATACTTCAACAGCTCCA
EX767687       <-- TGAAATTCAGCTTGTACTTCGTGGGCTACGAGGATACTTCAACAGCTCCA
EW739527       <-- TGAAATTCAGCTTGTACTTCGTGGGCTACGAGGATACTTCAACAGCTCCA
FD951119       <-- TGAAATTCAGCTTGTACTTCGTGGGCTACGAGGATACTTCAACAGCTCCA
EX767599       <-- TGAAATTCAGCTTGTACTTCGTGGGCTACGAGGATACTTCAACAGCTCCA
FD944841       <-- ..................................................
FY441147       <-- ..................................................
FD977109       <-- ..................................................
EX763634       --> TGAAATTCAGCTTGTACTTCGTGGGCTACGAGGATACTTCAACAGCTCCA
FD940673       --> TGAAATTTAGCTTGTACTTCTTGGGCTACGAGGACACTTCAACAGCTCCA
EV568340       --> TGAAATTCAGCTTGTACTTCGTGGGCTACGAGGATACTTCAACAGCTCCA
EV568809       --> TGAAATTCAGCTTGTACTTCGTGGGCTACGAGGATACTTCAACAGCTCCA
EW735436       --> TGAAATTCAGCTTGTACTTCGTGGGCTACGAGGATACTTCAACAGCTCCA
EX774011       --> TGAAATTCAGCTTGTACTTCGTGGGCTACGAGGATACTTCAACAGCTCCA
EY938818       --> TGAAATTTAGCTTGTACTTCTTGGGCTACGAGGACACTTCAACAGCTCCA
FD559145       --> TGAAATTCAGCTTGTACTTCGTGGGCTACGAGGATACTTCAACAGCTCCA

               501    -    551
UN13696        --> ACGGATCCAACTGAGAGAACTGTTTGGACCTTTGGTCGACCAGCAACAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV573092       <-- ACGGATCCAACTGAGAGAACTGTTTGGACCTTTGGTCGACCAGCAACAAT  Raphanus raphanistrum subsp. landra
EV573451       <-- ACGGATCCAACTGAGAGAACTGTTTGGACCTTTGGTCGACCAGCAACAAT  Raphanus raphanistrum subsp. landra
EX767687       <-- ACGGATCCAACTGAGAGAACGGTTTGGACCTTTGGTCGACCAGCAACGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW739527       <-- ACGGATCCAACTGAGAGAACGGTTTGGACCTTTGGTCGACCAGCAACGAT  Raphanus sativus cv Rat-Tail Radish #3870
FD951119       <-- ACGGATCCAACTGAGAGAACGGTTTGGACCTTTGGTCGACCAGCAACGAT  Raphanus sativus cv Rat-Tail Radish #3870
EX767599       <-- ACGGATCCAACTGAGAGAACGGTTTGGACCTTTGGTCGACCAGCAACGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD944841       <-- ................GAATTGTTTGGACCTTTGGTCGACCAGCAACAAT  Raphanus sativus cv Early Scarlet Globe
FY441147       <-- .......................TTGGACCTTTGGTCGACCAGCAACGAT  Raphanus sativus cv GSK3-1
FD977109       <-- ...............................................gAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX763634       --> ACGGATCCAACTGAGAGAACGGTTTGGACCTTTGGTCGACCAGCAACGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD940673       --> ACGGATCCAACTGAGAGAATGGTTTGGACCTTTGGTCGACCTGCCACAAT  Raphanus sativus var. oleiformis
EV568340       --> ACGGATCCAACTGAGAGAACTGTTTGGACCTTTGGTCGACCAGCAACAAT  Raphanus raphanistrum subsp. landra
EV568809       --> ACGGATCCAACTGAGAGAACTGTTTGGACCTTTGGTCGACCAGCAACAAT  Raphanus raphanistrum subsp. landra
EW735436       --> ACGGATCCAACTGAGAGAACGGTTTGGACCTTTGGTCGACCAGCAACGAT  Raphanus sativus cv Rat-Tail Radish #3870
EX774011       --> ACGGATCCAACTGAGAGAACTGTTTGGACCTTTGGTCGACCAGCAACAAT  Raphanus raphanistrum subsp. landra
EY938818       --> ACGGATCCAACTGAGAGAACGGTTTGGACCTTTGGTCGACCTGCCACAAT  Raphanus sativus cv Early Scarlet Globe
FD559145       --> ACGGATCCAACTGAGAGAACTGTTTGGACCTTTGGTCGACCAGCAACAAT  Raphanus raphanistrum subsp. landra

               551    -    601
UN13696        --> TGAGCTGACTCACAACTGGGGCACAGAGAGTGATCCCGAGTTTAAAGGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV573092       <-- TGAGCTGACTCACAACTGGGGCACAGAGAGTGATCCCGAGTTTAAAGGTT
EV573451       <-- TGAGCTGACTCACAACTGGGGCACAGAGAGTGATCCCGAGTTTAAAGGTT
EX767687       <-- TGAGCTGACTCACAACTGGGGCACAGAGAGTGATCCCGAGTTTAAAGGTT
EW739527       <-- TGAGCTGACTCACAACTGGGGCACAGAGAGTGATCCCGAGTTTAAAGGTT
FD951119       <-- TGAGCTGACTCACAACTGGGGCACAGAGAGTGATCCCGAGTTTAAAGGTT
EX767599       <-- TGAGCTGACTCACAACTGGGGCACAGAGAGTGATCCCGAGTTTAAAGGTT
FD944841       <-- TGAGCTGACTCACAACTGGGGCACAGAGAGTGATCCCGAGTTTAAAGGTT
FY441147       <-- TGAGCTGACTCACAACTGGGGCACAGAGAGTGATCCCGAGTTTAAAGGTT
FD977109       <-- TGAGTTGACTCACAACTGGGGCACAGAGAGTGATCCCGAGTTTAAAGGTT
EX763634       --> TGAGCTGACTCACAACTGGGGCACAGAGAGTGATCCCGAGTTTAAAGGTT
FD940673       --> TGAGCTGACTCACAACTGGGGCACAGAGAGTGATCCCGAGTTTAAAGGTT
EV568340       --> TGAGCTGACTCACAACTGGGGCACAGAGAGTGATCCCGAGTTTAAAGGTT
EV568809       --> TGAGCTGACTCACAACTGGGGCACAGAGAGTGATCCCGAGTTTAAAGGTT
EW735436       --> TGAGCTGACTCACAACTGGGGCACAGAGAGTGATCCCGAGTTTAAAGGTT
EX774011       --> TGAGCTGACTCACAACTGGGGCACAGAGAGTGATCCCGAGTTTAAAGGTT
EY938818       --> TGAGCTGACTCACAACTGGGGCACACAGAGTGATCCCGAGTTTAAAGGTT
FD559145       --> TGAGCTGACTCACAACTGGGGCACAGAGAGTGATCCCGAGTTTAAAGGTT

               601    -    651
UN13696        --> ATCATAATGGGAACTCCGAACCTAAAGGATTTGGGCATATTGGGGTTACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV573092       <-- ATCATAATGGGAACTCCGAACCTAAAGGATTTGGGCATATTGGGGTTACA
EV573451       <-- ATCATAATGGGAACTCCGAACCTAAAGGATTTGGGCATATTGGGGTTACA
EX767687       <-- ATCATAATGGGAACTCCGAACCTAAAGGATTTGGGCATATTGGGGTTACA
EW739527       <-- ATCATAATGGGAACTCCGAACCTAAAGGATTTGG-CATATTGGGGTTACA
FD951119       <-- ATCATAATGGGAACTCCGAACCTAAAGGATTTGGGCATATTGGGGTTACA
EX767599       <-- ATCATAATGGGAACTCCGAACCTAAAGGATTTGGGCATATTGGGGTTACA
FD944841       <-- ATCATAATGGGAACTCCGAACCTAAAGGATTTGGGCATATTGGGGTTACA
FY441147       <-- ATCATAATGGGAACTCCGAACCTAAAGGATTTGGGCATATTGGGGTTACA
FD977109       <-- ATCATAATGGGAACTCCGAACCTAAAGGATTTGGGCATATTGGGGTTACA
EX763634       --> ATCATAATGGGAACTCCGAACCTAAAGGATTTGGGCATATTGGGGTTACA
FD940673       --> ATCATAATGGGAACTCCGAACCTAAAGGATTTGGGCATATTGGGGTTACA
EV568340       --> ATCATAATGGGAACTCCGAACCTAAAGGATTTGGGCATATTGGGGTTACA
EV568809       --> ATCATAATGGGAACTCCGAACCTAAAGGATTTGGGCATATTGGGGTT...
EW735436       --> ATCATAATGGGAACTCCGAACCTAAAG-ATTTGG-CATATTGGGGTTACA
EX774011       --> ATCATAATGGGAACTCCGAACCTAAAGGATTTGGGCATATTGGGGTTACA
EY938818       --> ATCATAATGGGAACTCCGAACCTAAAGGATTTGGGCATATTGGGGTTACA
FD559145       --> ATCATAATGGGAACTCCGAACCTAAAGGATTTGGGCATATTGGGGTTACA

               651    -    701
UN13696        --> GTTGATGATGTGCACAAGGCATGCGAGAGATTTGAACAACTCGGAGTGG-
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV573092       <-- GTTGATGATGTGCACAAGGCATGCGAGAGATTTGAACAACTCGGAGTGG-  Raphanus raphanistrum subsp. landra
EV573451       <-- GTTGATGATGTGCACAAGGCATGCGAGAGATTTGAACAACTCGGAGTGG-  Raphanus raphanistrum subsp. landra
EX767687       <-- GTTGATGATGTGCACAAGGCATGCGAGAGATTTGAACAACTCGGAGTGG-  Raphanus raphanistrum subsp. raphanistrum (NY)
EW739527       <-- GTTGATGATGTGCACAAGGCATGCGAGAGATTTGAACAACTCGGAGTGG-  Raphanus sativus cv Rat-Tail Radish #3870
FD951119       <-- GTTGATGATGTGCACAAGGCATGCGAGAGATTTGAACAACTCGGAGTGG-  Raphanus sativus cv Rat-Tail Radish #3870
EX767599       <-- GTTGATGATGTGCCCAAGGCATGCGAGAGATTTGAACAACTCGGAGTGG-  Raphanus raphanistrum subsp. raphanistrum (NY)
FD944841       <-- GTTGATGATGTGCACAAGGCATGCGAGAGATTCGAACAACTGGGGGTGG-  Raphanus sativus cv Early Scarlet Globe
FY441147       <-- GTTGATGATGTGCACAAGGCATGCGAGAGATTTGAACAACTCGGAGTGG-  Raphanus sativus cv GSK3-1
FD977109       <-- GTTGATGATGTGCACAAGGCATGCGAGAGATTTGAACAACTGGGAGTGG-  Raphanus raphanistrum subsp. raphanistrum (NY)
EX763634       --> GTTGATGATGTGCACAAAGCATGCGAGAGATTTGA-CAACTCGGAGTGG-  Raphanus raphanistrum subsp. raphanistrum (NY)
FD940673       --> GTTGATGATGTGCACAAG-CATGCGAGAGATT-G-ACAACTGGGGGTGG-  Raphanus sativus var. oleiformis
EV568340       --> GTTGATGATGTGCACAAGGCATGCGAGAGATTTGAACAACTCGGAGTGG-  Raphanus raphanistrum subsp. landra
EV568809       --> ..................................................  Raphanus raphanistrum subsp. landra
EW735436       --> GTTGATGATGTGCACAAG-CATGCGAGAGA....................  Raphanus sativus cv Rat-Tail Radish #3870
EX774011       --> GTTGATGATGTGCACAAG-CATGCGAGAGATTCGAACAACTGGGGGTGGG  Raphanus raphanistrum subsp. landra
EY938818       --> GTTGATGATGTGCACAAGGCATGCGAGAGATTTGAACAACTGGGGGTGG-  Raphanus sativus cv Early Scarlet Globe
FD559145       --> GTTGATGATGTGCACAAGGCATGCGAGAGATTCGAACAACTGGGGGTGG-  Raphanus raphanistrum subsp. landra

               701    -    751
UN13696        --> AGTTTGTCAAG-AAACCTAACGATGGAAAGATGAAGAACTTAGCCTTCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV573092       <-- AGTTTGTCAAG-AAACCTAACGATGGAAAGATGAAGAACTTAGCCTTCAT
EV573451       <-- AGTTTGTCAAG-AAACCTAACGATGGAAAGATGAAGAACTTAGCCTTCAT
EX767687       <-- AGTTTGTCAAG-AAACCTAACGATGGAAAGATGAAGAACTTAGCCTTCAT
EW739527       <-- AGTTTGTCAAG-AAACCTAACGATGGAAAGATGAAGAACTTAGCCTTCAT
FD951119       <-- AGTTTGTCAAG-AAACCTAACGATGGAAAGATGAAGAACTTAGCCTTCAT
EX767599       <-- AGTTTGTCAAGGAAACCTAACGATGGAAAGATGAAGAACTTAGCCTTCAT
FD944841       <-- AGTTTGTCAAG-AAACCTAACGATGGAAAGATGAAGAACTTAGCCTTCAT
FY441147       <-- AGTTTGTCAAG-AAACCTAACGATGGAAAGATGAAGAACTTAGCCTTCAT
FD977109       <-- AGTTTGTCAAG-AAACCTAAGGATGGAAAGATGAAGAACTTAGCCTTCAT
EX763634       --> AGTTTGTCAAG-AAACCTAACGATGGAAAGATGAAGAACTTAGCCTTCAT
FD940673       --> AGTTTGTCAAG-AAccta................................
EV568340       --> AGTTTGTCAAG-AAACCTAACGATGGAAAGATGAAGAACTTAGCCTTCAT
EV568809       --> ..................................................
EW735436       --> ..................................................
EX774011       --> AGTTTGTCAAG-AAACCTAACGATGGAAATATGAAGAACATAGCCTTCAT
EY938818       --> AGTTTGTCAAG-AAACCTAACGATGGAAAGATGAAGAca...........
FD559145       --> AGTTTGTCAAG-AAACCTAACGATGGAAATATGAAGAACATAGCCTTCAT

               751    -    801
UN13696        --> AAAGGATCCAGATGGCTACTGGATCGAGATCTTTGATCTCAAGACTATCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV573092       <-- AAAGGATCCAGATGGCTACTGGATCGAGATCTTTGATCTCAAGACTATCG
EV573451       <-- AAAGGATCCAGATGGCTACTGGATCGAGATCTTTGATCTCAAGACTATCG
EX767687       <-- AAAGGATCCAGATGGCTACTGGATCGAGATCTTTGATCTCAAGACTATCG
EW739527       <-- AAAGGATCCAGATGGCTACTGGATCGAGATCTTTGATCTCAAGACTATCG
FD951119       <-- AAAGGATCCTGATGGCTACTGGATCGAGATCTTTGATCTCAAGACTATCG
EX767599       <-- AAAGGATCCAGATGGCTACTGGATCGAGATCTTTGATCTCAAGACTATCG
FD944841       <-- AAAGGATCCAGATGGCTACTGGATCGAGATCTTTGATCTCAAGACTATCG
FY441147       <-- AAAGGATCCTGATGGCTACTGGATCGAGATCTTTGATCTCAAGACTATCG
FD977109       <-- AAAGGATCCAGA......................................
EX763634       --> ..................................................
FD940673       --> ..................................................
EV568340       --> AAAGGATCCAGATGGCTACTGGATCGAGATCTTTGATCTCAAGACTATCG
EV568809       --> ..................................................
EW735436       --> ..................................................
EX774011       --> TAAG-ATCCTGATGGCTACTGGATCGAGATCTTTGATCTCAAGACTATCG
EY938818       --> ..................................................
FD559145       --> TAAGGATCCTGATGGCTACTGGATCGAGATCTTTGATCTCAAGAC.....

               801    -    851
UN13696        --> GGACAACAGCCGGAAACGCAGCCTGAGGAAGAAGTACAGATTGTGTGCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV573092       <-- GGACAACAGCCGGAAACGCAGCCTGAGGAAGAAGTACAGATTGTGTGCTG
EV573451       <-- GGACAACAGCCGGAAACGCAGCCTGAGGAAGAAGTACAGATTGTGTGCTG
EX767687       <-- GGACAACAGCCGGAAACGCAGCCTGAGGAAGAAGTACAGATTGTGTGCTG
EW739527       <-- GGACAACAGCCGGAAACGCAGCCTGAGGAAGAAGTACAGATTGTGTGCTG
FD951119       <-- GGACAACAGCCGGAAACGCAGCCTGAGGAAGAAGTACAGATTGTGTGCTG
EX767599       <-- GGACAACAGCCGGAAACGCAGCCTGAGGAAGAAGTACAGATTGTGTGCTG
FD944841       <-- GGACAACAGCCGGAAACGCAGCCTGAGGAAGAAGTACAGATTGTGTGCTG
FY441147       <-- GGACAACAGCCGGAAACGCAGCCTGAGGAAGAAGTACAGATTGTGTGCTG
FD977109       <-- ..................................................
EX763634       --> ..................................................
FD940673       --> ..................................................
EV568340       --> GGACAACAGCCGGAA-CGCAGCCTGAG--AGAAGTACAGATTGTGTGCTG
EV568809       --> ..................................................
EW735436       --> ..................................................
EX774011       --> GGACA-CAGCCGGAA-CGCAGCTTGAG-----AGTAC-GATTGTGTGCTG
EY938818       --> ..................................................
FD559145       --> ..................................................

               851    -    901
UN13696        --> TTTGTCTTCTTCTTGTGTTCCTTCCACCTGATCTTGAATACAAATAAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV573092       <-- TTTGTCTTCTTCTTGTGTTCCTTCCCCCTGATCTTGAATACAAATAAAGA
EV573451       <-- TTTGTCTTCTTCTTGTGTTCCTTCCCCCTGATCTTGAATACAAATAAAGA
EX767687       <-- TTTGTCTTCTTCTTGTGTTCCTTCCACCTGATCTTGAATACAAATAAAGA
EW739527       <-- TTTGTCTTCTTCTTGTGTTCCTTCCACCTGATCTTGAATACAAATAAAGA
FD951119       <-- TTTGTCTTCTTCTTGTGTTCCTTCCACCTGATCTTGAATACAAATAAAGA
EX767599       <-- TTTGTCTTCTTCTTGTGTTCCTTCCCCCTGATCTTGAATACAAATAAAGA
FD944841       <-- TTTGTCTTCTTCTTGTGTTCCTTCCACCTGATCTTGAATACAAATAAAGA
FY441147       <-- TTTGTCTTCTTCTTGTGTTCCTTCCACCTGATCTTGAATACAAATAAAGA
FD977109       <-- ..................................................
EX763634       --> ..................................................
FD940673       --> ..................................................
EV568340       --> TTTGTCTTCTTCTT....................................
EV568809       --> ..................................................
EW735436       --> ..................................................
EX774011       --> -TTGTCTTCTTCTTGTGTcttccactgagctga.................
EY938818       --> ..................................................
FD559145       --> ..................................................

               901    -    951
UN13696        --> TGTTGCCTGTCTCAACGAATAAAAGAAACTACGTTATCAATGCGTCTTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV573092       <-- TGTTGCCTGTCTCAACGAATAAAAGAAACTACGTTATCAATGCGTCTTTT
EV573451       <-- TGTTGCCTGTCTCAACGAATAAAAGAAACTACGTTATCAATGCGTCTTTT
EX767687       <-- TGTTGCCTGTCTCAACGAATAAAAGAAACTACGTTATCAATGCGTCTTTT
EW739527       <-- TGTTGCCTGTCTCAACGAATAAAAGAAACTACGTTATCAATGCGTCTTTT
FD951119       <-- TGTTGCCTGTCTCAACGAATAAAAGAAACTACGTTATCAATGCGTCTTTT
EX767599       <-- TGTTGCCTGTCTCAACGAATAAAAGAAACTACGCTATCAATGCGTCTTTT
FD944841       <-- TGTTGCCTGTCTCAACGAATAAAAGAAACTACGTTATCAATGCGTCTTTT
FY441147       <-- TGTTGCCTGTCTCAACGAATAAAAGAAACTACGTTATCAATGCGTCTTTT
FD977109       <-- ..................................................
EX763634       --> ..................................................
FD940673       --> ..................................................
EV568340       --> ..................................................
EV568809       --> ..................................................
EW735436       --> ..................................................
EX774011       --> ..................................................
EY938818       --> ..................................................
FD559145       --> ..................................................

               951    -   1001
UN13696        --> TCTTGATATTAACAATGAGTTGAGTTAAATAAGTTGTTATCAATGAGAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV573092       <-- T.................................................
EV573451       <-- TCTTG.............................................
EX767687       <-- TCTTGATATTAACAATGAGTTGAGTTAAATAAGTTGTTATCAATGAGAAT
EW739527       <-- TCTTGATATTAACAATGAGTTGAGTTAAATAAGTTGTTATCAATGAGAAT
FD951119       <-- TCTTGATATTAACAATGAGTTGAGTTAAATAAGTTGTTATCAATGAGAAT
EX767599       <-- TCTTGATATTAACAATGAGTTGAGTTAAATAAGTTGTTATCAATGAGGAT
FD944841       <-- TCTTGATATTAACAATGAGTTGAGTTAAATAAGTTGTTATCAATGAGAAT
FY441147       <-- TCTTGATATTAACAATGAG...............................
FD977109       <-- ..................................................
EX763634       --> ..................................................
FD940673       --> ..................................................
EV568340       --> ..................................................
EV568809       --> ..................................................
EW735436       --> ..................................................
EX774011       --> ..................................................
EY938818       --> ..................................................
FD559145       --> ..................................................

               1001   -   1051
UN13696        --> CAGTTTGATTTGATGGCAATGTGTGAATGTTATCTGTTTCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV573092       <-- ..........................................
EV573451       <-- ..........................................
EX767687       <-- CAGTTTGATTTG..............................
EW739527       <-- CAGTTTGATTT...............................
FD951119       <-- CAGTTTGGTTTGATGGC.........................
EX767599       <-- CAGTTTGATTTGATGTCAATGTGTGAATGTTATCTGTTTCCC
FD944841       <-- CAGTTTGATTTGATGGC.........................
FY441147       <-- ..........................................
FD977109       <-- ..........................................
EX763634       --> ..........................................
FD940673       --> ..........................................
EV568340       --> ..........................................
EV568809       --> ..........................................
EW735436       --> ..........................................
EX774011       --> ..........................................
EY938818       --> ..........................................
FD559145       --> ..........................................