RadishBase

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Alignment for radish unigene UN13717

               0      -     50
UN13717        --> .CCATAACAGTTTTTTTATTAATGTTTAGAATGATCATAGGGTAACCTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX749724       <-- ..................................................
EV548393       <-- ..................................................
EW724502       <-- ..................................................
FD571828       <-- ..................................................
EX889098       <-- ..................................................
EX886642       <-- ..................................................
EX898435       <-- ..................................................
EX765235       <-- ..................................................
EY938152       <-- ..................................................
EY917459       --> aCCATAACAGTTTTTTTATTAATGTTTAGAATGATCATAGGGTAACCTAT
EY934346       --> gCCATAACAGTTTTTTTATTAATGTTTAGAATGATCATAGGGTAACCTAT
EX907733       --> ..................................................
EW728342       --> ..................................................
EX753342       --> ..................................................
FD575591       --> ..................................................
EV544069       --> ..................................................
EX892896       --> ..................................................
FD944313       --> ..................................................
EX769029       --> ..................................................
FD548053       --> ..................................................

               50     -    100
UN13717        --> GGCCATGTCAAAACTGGAAAGACC-AAGGAAAATAAAAACCAATCTCAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX749724       <-- ............................ggAAATAAAAACCAATCTCAAA
EV548393       <-- ..................................................
EW724502       <-- ..................................................
FD571828       <-- ..................................................
EX889098       <-- ..................................................
EX886642       <-- ..................................................
EX898435       <-- ..................................................
EX765235       <-- ..................................................
EY938152       <-- ..................................................
EY917459       --> GGCCATGTCAAAACTGGAAAGACC-AAGGAAAATAAAAACCAATCTCAAA
EY934346       --> GGCCATGTCAAAACTGGAAAGACC-AAGGAAAATAAAAACCAATCTCAAA
EX907733       --> ..............ggaAAAGACCCAAGGCAAATAAAAACCAATCTCAAA
EW728342       --> ............................ggAAATAAAAACCAATCTCAAA
EX753342       --> ............................ggAAATAAAAACCAATCTCAAA
FD575591       --> ............................ggAAATAAAAGCCAATCTCAAA
EV544069       --> ..............................cAATAAAAACCAATCTCAAA
EX892896       --> ...............................AATAAAAACCAATCTCAAA
FD944313       --> ..............................cAATAAAAACCAATCTCAAA
EX769029       --> ..................................AAAAACCAATCTCAAA
FD548053       --> ..................................AAAAACCAATCTCAAA

               100    -    150
UN13717        --> CTCAAATTCGTCCAGCATGACAGATTCACATGCAAATGCGTCTTTAGTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX749724       <-- CTCAAATTCGTCCAGCATGACAGATTCACATGCAAATGCGTCTTTAGTTA
EV548393       <-- ..................................................
EW724502       <-- ..................................................
FD571828       <-- ..................................................
EX889098       <-- ..................................................
EX886642       <-- ..................................................
EX898435       <-- ..................................................
EX765235       <-- ..................................................
EY938152       <-- ..................................................
EY917459       --> CTCAAATTCGTCCAGCATGACAGATTCACATGCAAATGCGTCTTTAGTTA
EY934346       --> CTCAAATTCGTCCAGCATGACAGATTCACATGCAAATGCGTCTTTAGTTA
EX907733       --> CTCAAATTCGTCCAGCATGACAGATTCACATGCAAATGCGTCTTTAGTTA
EW728342       --> CTCAAATTCGTCCAGCATGACAGATTAACATGCAAATGCGTCTTTAGTTA
EX753342       --> CTCAAATTCGTCCAGCATGACAGATTCACATGCAAATGCGTCTTTAGTTA
FD575591       --> CTCAAATTCGTCCAGCATGACAGATTCACGTGCAAATGCGTCTTTAGTTA
EV544069       --> CTCAAATTCGTCCAGCATGACAGATTCACATGCAAATGCGTCTTTAGTTA
EX892896       --> CTCAAATTCGTCCAGCATGACAGATTCACATGCAAATGCGTCTTTAGTTA
FD944313       --> CTCAAATTCGTCCAGCATGACAGATTCACATGCAAATGCGTCTTTAGTTA
EX769029       --> CTCAAATTCGTCCAGCATGACAGATTCACATGCAAATGCGTCTTTAGTTA
FD548053       --> CTCAAATTCGTCCAGCATGACAGATTCACATGCAAATGCGTCTTTAGTTA

               150    -    200
UN13717        --> CAACACACT-AAGTCTTTCATGATTAAAAAAAAA-CCATAAATAAGTGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX749724       <-- CAACACACT-AAGTCTTTCATGATTAAAAAAAAAACCATAAATAAGTGAA  Raphanus raphanistrum subsp. maritimus
EV548393       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW724502       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD571828       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX889098       <-- ..................................................  Raphanus sativus var. oleiformis
EX886642       <-- ..................................................  Raphanus sativus var. oleiformis
EX898435       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX765235       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY938152       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY917459       --> CAACACACT-AAGTCTTTCATGATTAAAAAAAA--CCATAAATAAGTGAA  Raphanus raphanistrum subsp. landra
EY934346       --> CA-CACACT-AAGTCTTTCATTA-TAGAAAAAAA-CCATAAATAAGTGAA  Raphanus sativus cv Early Scarlet Globe
EX907733       --> CAACACACT-AAGTCTTTCATTAT--AGAAAAAA-CCATAAATAAGTGAA  Raphanus sativus cv Rat-Tail Radish #3870
EW728342       --> CA-CACACT-AAGTCTTTCATTA-TAGAAAAAAA-CCATAAATAAGTGAA  Raphanus sativus cv Early Scarlet Globe
EX753342       --> CAACACACT-AAGTCTTTCATGATTAAAAAAAAAACCATAAATAAGTGAA  Raphanus raphanistrum subsp. maritimus
FD575591       --> CAACACACT-AAGTCTTTCATGAT-AGAAAAAAA-CCATAAATAAGTGAA  Raphanus sativus cv Early Scarlet Globe
EV544069       --> CAACACACT-AAGTCTTTCATGATTAAAAAAAAA-CCATAAATAAGTGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX892896       --> CAACACACT-AAGTCTTTCATGAT-AGAAAAAAA-CCATAAATAAGTGAA  Raphanus sativus var. oleiformis
FD944313       --> CA-CACACT-AAGTCTTTCATTAT-AGAAAAAAA-CCATAAATAAGTGAA  Raphanus sativus cv Early Scarlet Globe
EX769029       --> CAACACACT-AAGTCTTTCATGATTAAAAAAAAA-CCATAAATAAGTGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD548053       --> CAACACACTTAAGTCTTTCATGATTAAAAAAAAA-CCATAAATAAGTGAA  Raphanus raphanistrum subsp. raphanistrum (NY)

               200    -    250
UN13717        --> GCAGAGATATGTCAATCACAGATTGATGCACTTTCCAAGTTTTTT-CTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX749724       <-- GCAGAGATATGACAATCACAGATTGATGCACTTTCCAAGTTTTTT-CTGG  Raphanus raphanistrum subsp. maritimus
EV548393       <-- ..............................................CTGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW724502       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD571828       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX889098       <-- ..................................................  Raphanus sativus var. oleiformis
EX886642       <-- ..................................................  Raphanus sativus var. oleiformis
EX898435       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX765235       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY938152       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY917459       --> GCAGAGATATGACAATCACAGATTGATGCACTTTCCAAGTTTTTT-CTGG  Raphanus raphanistrum subsp. landra
EY934346       --> GCAGAAATATGTCAATCACAGATTGATGCACTTTCCAAGTTTTTT-CTGG  Raphanus sativus cv Early Scarlet Globe
EX907733       --> GCAGAGATATGTCAATCACAGATTGATGCACTTTCCAAGTTTTTT-CTGG  Raphanus sativus cv Rat-Tail Radish #3870
EW728342       --> GCAGAGATATGTCAATCACAGATTGATGCACTTTCCAAGTTTTTT-CTGG  Raphanus sativus cv Early Scarlet Globe
EX753342       --> GCAGAGATATGACAATCACAGATTGATGCACTTTCCAAGTTTTTT-CTGG  Raphanus raphanistrum subsp. maritimus
FD575591       --> GCAGAAATATGTGAATCACAGATTGATGCACTTTCCAAGTTTTTT-CTGG  Raphanus sativus cv Early Scarlet Globe
EV544069       --> GCAAAGATATGACAATCACAGATTGATGCACTTTCCAAGTTTTTTTCTGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX892896       --> GCAGAAATATGTGAATCACAGATTGATGCACTTTCCAAGTTTTTTTCTGG  Raphanus sativus var. oleiformis
FD944313       --> GCAGAGATATGTCAATCACAGATTGATGCACTTTCCAAGTTTTT--CTGG  Raphanus sativus cv Early Scarlet Globe
EX769029       --> GCAGAGATATGACAATCACAGATTGATGCACTTTCCAAGTTTTTT-CTGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD548053       --> GCAGAGATATGACAATCACAGATTGATGCACTTTCCAAGTTTTTT-CTGG  Raphanus raphanistrum subsp. raphanistrum (NY)

               250    -    300
UN13717        --> AGTTCCTTTGTTTCTTTCTCTGCTTTCTCCAGATTCTCTCTCAGCTTCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX749724       <-- AGTTCCTTTGTTTCTTTCTCTGCTTTCTCCAGATTCTCTCTCAGCTTCTT
EV548393       <-- AGTTCCTTTGTTTCTTTCTCTGCTTTCTCCAGATTCTCTCTCAGCTTCTT
EW724502       <-- AGTTCCTTTGTTTCTTTCTCTGCTTTCTCCAGATTCTCCCTCAGCTTCTT
FD571828       <-- ..................................................
EX889098       <-- ..................................................
EX886642       <-- ..................................................
EX898435       <-- ..................................................
EX765235       <-- ..................................................
EY938152       <-- ..................................................
EY917459       --> AGTTCCTTTGTTTCTTTCTCTGCTTTCTCCAGATTCTCTCTCAGCTTCTT
EY934346       --> AGTTCCTTTGTTTCTTTCTCTGCTTTCTCCAGATTCTCCCTCAGCTTCTT
EX907733       --> AGTTCCTTTGTTTCTTTCTCTGCTTTCTCCAGATTCTCTCTCAGCTTCTT
EW728342       --> AGTTCCTTTGTTTCTTTCTCTGCTTTCTCCAGATTCTCCCTCAGCTTCTT
EX753342       --> AGTTCCTTTGTTTCTTTCTCTGCTTTCTCCAGATTCTCTCTCAGCTTCTT
FD575591       --> AGTTCCTTTGTTTCTTTCTCTGCGTTCTCCAGATTCTCTCTCAGCTTCTT
EV544069       --> AGTTCCTTTGTTTCTTTCTCTGCTTTCTCCAAATTCTCTCTCAGCTTCTT
EX892896       --> AGTTCCTTTGTTTCTTTCTCTGCTTTCTCCAGATTCTCTCTCAGCTTCTT
FD944313       --> AGTTCCTTTGTTTCTTTCTCTGCTTTCTCCAGATTCTCCCTCAGCTTCTT
EX769029       --> AGTTCCTTTGTTTCTTTCTCTGCTTTCTCCAGATTCTCTCTCAGCTTCTT
FD548053       --> AGTTCCTTTGTTTCTTTCTCTGCTTTCTCCAGATTCTCTCTCAGCTTCTT

               300    -    350
UN13717        --> TATCTCATCGCTCGACCGTTTCTGAGCTTCATTTGCCCTCTTCTCCGCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX749724       <-- TATCTCATCGCTCGACCGTTTCTGAGCTTCATTTGCCCTCTTCTCCGCTT  Raphanus raphanistrum subsp. maritimus
EV548393       <-- TATCTCATCGCTCGACCGTTTCTGAGCTTCATTTGCCCTCTTCTCCGCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW724502       <-- TATCTCATCGCTCGACCGTTTCTGAGCTTCATTTGCCCTCTTCTCAGCTT  Raphanus sativus cv Early Scarlet Globe
FD571828       <-- .......................................CTTCTCAGCTT  Raphanus sativus cv Early Scarlet Globe
EX889098       <-- ..................................................  Raphanus sativus var. oleiformis
EX886642       <-- ..................................................  Raphanus sativus var. oleiformis
EX898435       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX765235       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY938152       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY917459       --> TATCTCATCGCTCGACCGTTTCTGAGCTTCATTTGCCCTCTTCTCCGCTT  Raphanus raphanistrum subsp. landra
EY934346       --> TATCTCATCGCTCGACCGTTTCTGAGCTTCATTTGCCCTCTTCTCAGCTT  Raphanus sativus cv Early Scarlet Globe
EX907733       --> TATCTCATCGCTCGACCGTTTCTGAGCTTCATTTGCCCTCTTCTCCGCTT  Raphanus sativus cv Rat-Tail Radish #3870
EW728342       --> TATCTCATCGCTCGACCGTTTCTGAGCTTCATTTGCCCTCTTCTCAGCTT  Raphanus sativus cv Early Scarlet Globe
EX753342       --> TATCTCATCGCTCGACCGTTTCTGAGCTTCATTTGCCCTCTTCTCCGCTT  Raphanus raphanistrum subsp. maritimus
FD575591       --> TATCTCATCGCTCGACCGTTTCTGAGCTTCATTTGCCCTCTTCTCAGCTT  Raphanus sativus cv Early Scarlet Globe
EV544069       --> TATCTCATCGCTCGACCGTTTCTGAGCTTCATTTGCCCTCTTCTCCGCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX892896       --> TATCTCATCGCTCGACCGTTTCTGAGCTTCATTTGCCCTCTTCTCAAATT  Raphanus sativus var. oleiformis
FD944313       --> TATCTCATCGCTCGACCGTTTCTGAGCTTCATTTGCCCTCTTCTCAGCTT  Raphanus sativus cv Early Scarlet Globe
EX769029       --> TATCTCATCGCTCGACCGTTTCTGAGCTTCATTTGCCCTCTTCTCCGCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD548053       --> TATCTCATCGCTCGA...................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               350    -    400
UN13717        --> CAAGTCTTGCTGCTTGTTCTTCACCTAGCTGCTTCTCCAGCCTCTTTGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX749724       <-- CAAGTCTCGCTGCTTGTTCTTCACCTAGCTGCTTCTCCAGCCTCTTTGCC  Raphanus raphanistrum subsp. maritimus
EV548393       <-- CAAGTCTCGCTGCTTGTTCTTCACCTAGCTGCTTCTCCAGCCTCTTTGCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW724502       <-- CAAGTCTTGCTGCTTGTTCTTCACCTAGCTGCTTCTCCAGCCTCTTTGCC  Raphanus sativus cv Early Scarlet Globe
FD571828       <-- CAAGTCTTGCTGCTTGTTCTTCACCTAGCTGCTTCTCCAGCCTCTTTGCC  Raphanus sativus cv Early Scarlet Globe
EX889098       <-- ..................................................  Raphanus sativus var. oleiformis
EX886642       <-- ..................................................  Raphanus sativus var. oleiformis
EX898435       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX765235       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY938152       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY917459       --> CAAGTCTCGCTGCTTGTTCTTCACCTAGCTGCTTCTCCAGCCTCTTTGCC  Raphanus raphanistrum subsp. landra
EY934346       --> CAAGTCTTGCTGCTTGTTCTTCACCTAGCTGCTTCTCCAGCCTCTTTGCC  Raphanus sativus cv Early Scarlet Globe
EX907733       --> CAAGTCTTGCTGCTTGTTCTTCACCTAGCTGCTTCTCCAGCCTCTTTGCC  Raphanus sativus cv Rat-Tail Radish #3870
EW728342       --> CAAGTCTTGCTGCTTGTTCTTCACCTAGCTGCTTCTCCAGCCTCTTTGCC  Raphanus sativus cv Early Scarlet Globe
EX753342       --> CAAGTCTCGCTGCTTGTTCTTCACCTAGCTGCTTCTCCAGCCTCTTTGCC  Raphanus raphanistrum subsp. maritimus
FD575591       --> CAAGTCTTGCTGCTTGTTCTTCACCTAGCTGCTTCTCCAGCCTCTTTGCC  Raphanus sativus cv Early Scarlet Globe
EV544069       --> CAAGTCTCGCTGCTTGTTCTTCACCTAGCTGCTTCTCCAGCCTCTTTGCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX892896       --> CAAGTCTTGCTGCTTGTTCTTCACCTAGCTGCTTCTCCAGCCTCTTTGCC  Raphanus sativus var. oleiformis
FD944313       --> CAAGTCTTGCTGCTTGTTCTTCACCTAGCTGCTTCTCCAGCCTCTTTGCC  Raphanus sativus cv Early Scarlet Globe
EX769029       --> CAAGTCTCGCTGCTCGTTCTTCACCTAGCTGCTTCTCCAGCCTCTTTGCC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD548053       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               400    -    450
UN13717        --> GTTTCTCTCAGCTTTGTCTCCACCATATCTGTGATGCGATTAAGCTGTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX749724       <-- GTTTCTCTCAGCTTTGTCTCCACCATATCTGTGATGCGATTAAGCTGTCG
EV548393       <-- GTTTCTCTCAGCTTTGTCTCCACCATATCTGTGATGCGATTAAGCTGTCG
EW724502       <-- GTTTCTCTCAGCTTTGTCTCCACCATATATGTGATGCGATTAAGCTGTCG
FD571828       <-- GTTTCTCTCAGCTTTGTCTCCACCATATCTGTGATGCGATTAAGCTGTCG
EX889098       <-- ..................................................
EX886642       <-- ..................................................
EX898435       <-- ..................................................
EX765235       <-- ..................................................
EY938152       <-- ..................................................
EY917459       --> GTTTCTCTCAGCTTTGTCTCCACCATATCTGTGATGCGATTAAGCTGTCG
EY934346       --> GTTTCTCTCAGCTTTGTCTCCACCATATCTGTGATGCGATTAAGCTGTCG
EX907733       --> GTTTCTCTCAGCTTTGTCTCCACCATATCTGTGATACGATTAAGCTGTCG
EW728342       --> GTTTCTCTCAGCTTTGTCTCCACCATATATGTGATGCGATTAAGCTGTCG
EX753342       --> GTTTCTCTCAGCTTTGTCTCCACCATATCTGTGATGCGATTAAGCTGTCG
FD575591       --> GTTTCTCTCAGCTTTGTCTCCACCATATCTGTGATGCGATTAAGCTGTCG
EV544069       --> GTTTCTCTCAGCTTTGTCTCCACCATATCTGTGATGCGATTAAGCTGTCG
EX892896       --> GTTTCTCTCAGCTTTGTCTCCACCATATCTGTGATGCGATTAAGCTGTCG
FD944313       --> GTTTCTCTCAGCCTTGTCTCCACCATATCTGTGATGCGATTAAGCTGTCG
EX769029       --> GTTTCTCTCAGCTTTGTCTCCACCATATCTGTGATGCGATTAAGCTGTCG
FD548053       --> ..................................................

               450    -    500
UN13717        --> GTCATATGATATCTCTATTTGCTTCTTGAACTCAGATATCTCATCCTTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX749724       <-- GTCATATGATATCTCTATTTGCTTCTTGAACTCAGATATCTCATCCTTTG
EV548393       <-- GTCATATGATATCTCTATTTGCTTCTTGAACTCAGATATCTCATCCTTTA
EW724502       <-- GTCATATGATATCTCTATTTGCTTCTTGAACTCAGATATCTCATCCTTTG
FD571828       <-- GTCATATGATATCTCTATTTGCTTCTTGAACTCAGATATCTCATCCTTTG
EX889098       <-- ..................................................
EX886642       <-- ..................................................
EX898435       <-- ..................................................
EX765235       <-- ..................................................
EY938152       <-- ..................................................
EY917459       --> GTCATATGATATCTCTATTTGCTTCTTGAACTCAGATATCTCATCCTTTG
EY934346       --> GTCATATGATATCACTATTTGCTTCTTGAACTCAGATATCTCATCCTTTG
EX907733       --> GTCATATGATATCTCTATTTGCTTCTTGAGCTCAGATATCTCATCCTTTG
EW728342       --> GTCATATGATATCTCTATTTGCTTCTTGAACTCAGATATCTCATCCTTTG
EX753342       --> GTCATATGATATCTCTATTTGCTTCTTGAACTCAGATATCTCATCCTTTG
FD575591       --> GTCATATGATATCTCTATTTGCTTCTTGAACTCAGATATCTCATCCTTTG
EV544069       --> GTCATATGATATCTCTATTTGCTTCTTGAACTCAAATATCTCATCCTTTA
EX892896       --> GTCATATGATATCTGTATTTGCTTCTTGAACTCAGATATCTCATCCTTTG
FD944313       --> GTCATATGATATCTCTATTTGCTTCTTGAACTCAGATATCTCATCCTTTG
EX769029       --> GTCATATGATATCTCTATTTGCTTCTTGAACTCAGATATCTCATCCTTTG
FD548053       --> ..................................................

               500    -    550
UN13717        --> AATAACCCTTGAGCGATTCAACCTCCTTCTTCTGGTCACGTACCTTGATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX749724       <-- AATAACCCTTGAGCGATTCAACCTCCTTCTTCTGGTCACGTACCTTGATA
EV548393       <-- AATAACCCTTGAGCGATTCAACCTCCTTCTTCTGGTCACGTACCTTGATA
EW724502       <-- AATAACCCTTGAGCGACTCAACCTCCTTCTTCTGGTCACGTACCTTGATA
FD571828       <-- AATAACCCTTGAGCGATTCAACCTCCTTCTTCTGGTCACGTACCTTGATA
EX889098       <-- ......................aactcttTTCTG-TCACGTA--CTGATA
EX886642       <-- ..................................................
EX898435       <-- ..................................................
EX765235       <-- ..................................................
EY938152       <-- ..................................................
EY917459       --> AATAACCCTTGAGCGATTCAACCTCCTTCTTCTGGTCACGTACCTTGATA
EY934346       --> AATAACCCTTGAGCGACTCAACCTCCTTCTTCTGGTCACGTACCTTGATA
EX907733       --> AATAACCCTTGAGCGATCCAACCTCCTTCTTCTGGTCACGTAGCTTGATA
EW728342       --> AATAACCCTTGAGCGACTCAACCTCCTTCTTCTGGTCACGTACCTTGATA
EX753342       --> AATAACCCTTGAGCGATTCAACCTCCTTCTTCTGGTCACGTACCTTGATA
FD575591       --> AATAACCCTTGAGCGATTCAACCTCCTTCTTCTGGTCACGTACCTTGATA
EV544069       --> AATAACCCTTGAGCGATTCAACCTCCTTCTTCTGGTCACGTACCTTGATA
EX892896       --> AATAACCCTTGAGCGATTCAACCTCCTTCTTCTGGTCACGTACCTTGATA
FD944313       --> AATAACCCTTGAGCGACTCAACCTCCTTCTTCTGGTCACGTACCTTGATA
EX769029       --> AATAACCCTTGAGCGATTCAACCTCCTTCTTCTGGTCACGTACCTTGATA
FD548053       --> ..................................................

               550    -    600
UN13717        --> GCCTCTTCCTGAAGTTCATGAAACAATTCATCTGTAAACGGTTTTCCATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX749724       <-- GCCTCTTCCTGAAGTTCATGAAACAATTCATCTGTAAACGGTTTTCCATT  Raphanus raphanistrum subsp. maritimus
EV548393       <-- GCCTCTTCCTGAAGTTCATGAAACAATTCATCTGTAAACGGTTTTCCATT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW724502       <-- GCCTCTTCCTGAAGTTCATGAAACAATTCATCTGTAAACGGTTTTCCATT  Raphanus sativus cv Early Scarlet Globe
FD571828       <-- GCCTCTTCCTGAAGTTCATGGAACAGTTCATCTGTAAACGGTTTTCCATT  Raphanus sativus cv Early Scarlet Globe
EX889098       <-- GC-TC--TCTGAAGT-CATGGAACAGT-CATCTGTAAACGGTTT-CCAT-  Raphanus sativus var. oleiformis
EX886642       <-- ............AGTTCATGGAACAGTTCATCTGTAAACGGTTTTCCATT  Raphanus sativus var. oleiformis
EX898435       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX765235       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY938152       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY917459       --> GCCTCTTCCTGAAGTTCATGAAACAATTCATCTGTAAACGGTTTTCCATT  Raphanus raphanistrum subsp. landra
EY934346       --> GCCTCTTCCTGAAGTTCATGAAACAATTCATCTGTAAACGGTTTTCCATT  Raphanus sativus cv Early Scarlet Globe
EX907733       --> GCTTCTTCCTGAAGTTCATGGAACAGTTCATCTGTAAACGGTTTTCCATT  Raphanus sativus cv Rat-Tail Radish #3870
EW728342       --> GCCTCTTCCTGAAGTTCATGAAACAATTCATCTGTAAACGGTTTTCCATT  Raphanus sativus cv Early Scarlet Globe
EX753342       --> GCCTCTTCCTGAAGTTCATGAAACAATTCATCTGTAAACGGTTTTCCATT  Raphanus raphanistrum subsp. maritimus
FD575591       --> GCCTCTTCCTGAAGTTCATGGAACAGTTCATCTGTAAACGGTTTTCCATT  Raphanus sativus cv Early Scarlet Globe
EV544069       --> GCCTCTTCCTGAAGTTCATGAAACAATTCATCTGTAAACGGTTTTCCATT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX892896       --> GCCTCTTCCTGAAGTTCATGGAACAGTTCATCTGTAAACGGTTTTCCATT  Raphanus sativus var. oleiformis
FD944313       --> GCCTCTTCCTGAAGTTCATGAAACAATTCATCTGTAAACGGTTTTCCATT  Raphanus sativus cv Early Scarlet Globe
EX769029       --> GCCTCTTCCTGAAGTTTATGAAACAATTCATCTGTAAACGGTTTTCCATT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD548053       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               600    -    650
UN13717        --> GTTCTTTCTGGAGATGGAATCAACATGTGAGAGGAGCTTCTGAACTTGCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX749724       <-- GTTCTTTCTGGAGATGGAATCAACATGTGAGAGGAGCTTCTGAACTTGCG
EV548393       <-- GTTCTTTCTGGAGATGGAATCAACATGTGAGAGGAGCTTCTGAACTTGCG
EW724502       <-- GTTCTTTCTGGAGATGGAATCAACATGTGAGAGGAGCTTCTGAACTTGCG
FD571828       <-- GTTCTTTCTGGAGATGGAATCAACATGTGAGAGGAGCTTCTGAACTTGCG
EX889098       <-- GT-CTTTCTG-AGATGGAATCAACATGTGAGAGGAGCTTCTGAAATTGCG
EX886642       <-- GTTCTTTCTGGAGATGGAATCAACATGTGAGAGGAGCTTCTGAACTTGCG
EX898435       <-- ...CTTTCTG-AGATGGA-TCAACATGTGAGAGGAGCT-CTGAACTTGCG
EX765235       <-- ..................................................
EY938152       <-- ..................................................
EY917459       --> GTTCTTTCTGGAGATGGAATCAACATGTGAGAGGAGCTTCTGAACTTGCG
EY934346       --> GTTCTTTCTGGAGATGGAATCAACATGTGAGAGGAGCTTCTGAACTTGCG
EX907733       --> GTTCTTTCTGGAGATGGAATCAACATGTGAGAGGAGCTTCTGAACTTGCG
EW728342       --> GTTCTTTCTGGAGATGGAATCAACATGTGAGAGGAGCTTCTGAACTTGCG
EX753342       --> GTTCTTTCTGGAGATGGAATCAACATGTGAGAGGAGCTTCTGAACTTGCG
FD575591       --> GTTCTTTCTG........................................
EV544069       --> GTTCTTTCTGGAGATGGAATCAACATGTGAGAGGAGCTTCTGAACTTGCG
EX892896       --> GTTCTTTCTGGAGATGGAATCAACATGTGAGAGGAGCTTCTGAAATTGCG
FD944313       --> GTTCTTTCTGGAGATGGAATCAACATGTGAGAGGAGCTTCTGAACTTGCG
EX769029       --> GTTCTTTCTGGAGATGGAATCAACATGTGAGAGGAGCTTCTGAACTTGCG
FD548053       --> ..................................................

               650    -    700
UN13717        --> CAGCTTTCTTGCGCTTATCCTTAGTCTTGTTATCAAACAGTACCATTCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX749724       <-- CAGCTTTCTTGCGCTc..................................
EV548393       <-- CAGCTTTCTTGCGCTTATCCTTAGTCTTGTTATCAAACAGTACCATTCGA
EW724502       <-- CAGCTTTCTTGCGCTTATCCTTAGTCTTGTTATCAAACAGTACCATTCGA
FD571828       <-- CAGCTTTCTTGCGCTTATCCTTAGTCTTGTTATCAAACAGTACCATTCGA
EX889098       <-- CAGCTTTCTTGCGCTTATC-TTAGTCTTGTTATCAAACAGTACCATTCGA
EX886642       <-- CAGCTTTCTTGCGCTTATCCTTAGTCTTGTTATCAAACAGTACCATTCGA
EX898435       <-- CAGCTT-CTTGCGCTTATCTTTAGTCTTGTTATCAAACAGTACCATTCGA
EX765235       <-- ..................................................
EY938152       <-- ..................................................
EY917459       --> CAGCTTTCTTGCGCTTATCCTTAGTCTTGTTATCAAAC............
EY934346       --> CAGCTTTCTTGCGCTTATCCTTAGTCTTGTTATCAAACAGTACCATTCGA
EX907733       --> CAGCTTTCTTGCGCTTATCCTTAGTCTTGTTAT.................
EW728342       --> CAGCTTTCTTGCGCTTATCCTTAGTCTTGTTATCAAACAGTACCATTCGA
EX753342       --> CAGCTTTCTTGCGCTc..................................
FD575591       --> ..................................................
EV544069       --> CAGCTTTCTTGCGCTTATCCTTAGTCTTGTTATCAAACAGTACCATTCGA
EX892896       --> CAGCTTTCTTGCGCTTATCCTTAGTCTTGTTATCAAACAGTACCATTCGA
FD944313       --> CAGCTTTCTTGCGCTTATCCTTAGTCTTGTTATCAAACAGTACCATTCGA
EX769029       --> CAGCTTTCTTGCGCTTATCCTTAGTCTTGTTATCAAACAGTACCATTCGA
FD548053       --> ..................................................

               700    -    750
UN13717        --> TTGTCACATAGCTCAAGCATCTCTTTCAGAAACTCAGGGCAAGCCTGAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX749724       <-- ..................................................
EV548393       <-- TTGTCACATAGCTCAAGCATCTCTTTCAGAAACTCAGGGCAAGCCTGAGC
EW724502       <-- TTGTCACATAGCTCAAGCATCTCTTTCAGAAACTCAGGGCAAGCCTGAGC
FD571828       <-- TTGTCACATAGCTCAAGCATCTCTTTCAGAAACTCAGGGCAAGCCTGAGC
EX889098       <-- TTGTCACATAGCTCAAGCATCTCTTTCAGAAACTCAGGGCAAGCCTGAGC
EX886642       <-- TTGTCACATAGCTCAAGCATCTCTTTCAGAAACTCAGGGCAAGCCTGAGC
EX898435       <-- TTGTCACATAGCTCAAGCATCTCTTTCAGAAACTCAGGGCAAGCCTGAGC
EX765235       <-- ...............................................AGC
EY938152       <-- ..................................................
EY917459       --> ..................................................
EY934346       --> TTG...............................................
EX907733       --> ..................................................
EW728342       --> TTGTCACATAGCTCAAGCATCTCTTTCAGAAACTCAGGGCAAGCCTGAGC
EX753342       --> ..................................................
FD575591       --> ..................................................
EV544069       --> TTGTCACATAGCTCAAGCATCTCTTTCAGAAACTCAGGGCAAGCCTGAGC
EX892896       --> TTGTCACATAGCTCAAGCATCTCTTTCAGAAACTCAGGGCAAGCCTGAGC
FD944313       --> TTGTCACATAGCTCAAGCATCTCTTTCAGAAACTCAGGGCAAGCCTGAGC
EX769029       --> TTGTCACATAGCTCAAGCATCTCTTTCAGAAACTCAGGGCAAGCCTGAGC
FD548053       --> ..................................................

               750    -    800
UN13717        --> CAAATACTCCTCCAACGTCTCTTCATTCTCTTCCAGCTCATCACCACCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX749724       <-- ..................................................
EV548393       <-- CAAATACTCCTCCAACGTCTCTTCATTCTCTTCCAGCTCATCACCACCAG
EW724502       <-- CAAATACTCCTCCAACGTCTCTTCATTCTCTTCCAGTTCATCACCACCAG
FD571828       <-- CAAATACTCCTCCAACGTCTCTTCATTCTCTTCCAGCTCATCACCACCAG
EX889098       <-- CAAATACTCCTCCAACGTCTCTTCATTCTCTTCCAGCTCATCACCACCAG
EX886642       <-- CAAATACTCCTCCAACGTCTCTTCATTCTCTTCCAGCTCATCACCACCAG
EX898435       <-- CAAATACTCCTCCAACGTCTCTTCATTCTCTTCCAGCTCATCACCACCAG
EX765235       <-- CAAATACTCCTCCAACGTCTCTTCATTCTCTTCCAGCTCATCACCACCAG
EY938152       <-- ..................................................
EY917459       --> ..................................................
EY934346       --> ..................................................
EX907733       --> ..................................................
EW728342       --> CAAATACTCCTCCAACGTCTCTTCATTCTCTTCCAGTTCATCACCACCAG
EX753342       --> ..................................................
FD575591       --> ..................................................
EV544069       --> CAAATACTCCTCCAACGTCTCTTCATTCTCTTCCAGCTCATCACCACCAG
EX892896       --> CAAATACTCC........................................
FD944313       --> CAAATACTCCTCCAACGTCTCTTCATTCTCTTCCAGTTCATCACCACCAG
EX769029       --> CAAATACTCCTCCAA...................................
FD548053       --> ..................................................

               800    -    850
UN13717        --> TGAACACAATGATCATATAATCAGCGATCTTACTACCAAACAGAGTTTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX749724       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV548393       <-- TGAACACAATGATCATATAATCAGCGATCTTACTACCAAACAGc......  Raphanus raphanistrum subsp. raphanistrum (NY)
EW724502       <-- TAAACACAATGATCATATAATCAGCGATCTTACTACCAAACAGAGTTTGC  Raphanus sativus cv Early Scarlet Globe
FD571828       <-- TGAACACAATGATCATATAATCAGCGATTTTACTACCAAACAGAGTTTGC  Raphanus sativus cv Early Scarlet Globe
EX889098       <-- TGAACACAATGATCATATAATCAGCGATTTTACTACCAAACAGAGTTTGC  Raphanus sativus var. oleiformis
EX886642       <-- TGAACACAATGATCATATAATCAGCGATTTTACTACCAAACAGAGTTTGC  Raphanus sativus var. oleiformis
EX898435       <-- TGAACACAATGATCATATAATCAGCGATTTTACTACCAAACAGAGTTTGC  Raphanus sativus cv Early Scarlet Globe
EX765235       <-- TGAACACAATGATCATATAATCAGCGATCTTACTACCAAACAGAGTTTGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY938152       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY917459       --> ..................................................  Raphanus raphanistrum subsp. landra
EY934346       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX907733       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EW728342       --> TAAACACAATGATCATATAATCAGCGATCTTACTACCAAACAGAGTTTGC  Raphanus sativus cv Early Scarlet Globe
EX753342       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD575591       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EV544069       --> TGAACACAATGATCATATAATCAGCGATCTTACTACCAAACAGc......  Raphanus raphanistrum subsp. raphanistrum (NY)
EX892896       --> ..................................................  Raphanus sativus var. oleiformis
FD944313       --> TAAACACAATGATCATATAATCAGCGATCTTACTACCAAACAGAGTTTGC  Raphanus sativus cv Early Scarlet Globe
EX769029       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD548053       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               850    -    900
UN13717        --> AAGTGATAGAGAGCAGATTTCTCCTCCTCGGAGAGCCGACCCCTCACAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX749724       <-- ..................................................
EV548393       <-- ..................................................
EW724502       <-- AAGTGATAGAGAGCAGATTTCTCCTCCTCGc...................
FD571828       <-- AAGTGATAGAGAGCAGATTTCTCCTCCTCGGAGAGCCGACCCCTCACAGA
EX889098       <-- AAGTGATAGAGAGCAGATTTCTCCTCCTCGGAGAGCCGACCCCTCACAGA
EX886642       <-- AAGTGATAGAGAGCAGATTTCTCCTCCTCGGAGAGCCGACCCCTCACAGA
EX898435       <-- AAGTGATAGAGAGCAGATTTCTCCTCCTCGGAGAGCCGACCCCTCACAGA
EX765235       <-- AAGTGATAGAGAGCAGATTTCTCCTCCTCGGAGAGCCGACCCCTCACAGA
EY938152       <-- ..................................................
EY917459       --> ..................................................
EY934346       --> ..................................................
EX907733       --> ..................................................
EW728342       --> AAGTGATAGAGAGCAGATTTCTCCTCCTCGc...................
EX753342       --> ..................................................
FD575591       --> ..................................................
EV544069       --> ..................................................
EX892896       --> ..................................................
FD944313       --> AAGTGATAGAGAGCAGATTTCTCCTCCTCGGAAAGCCGACCCCTCACAGA
EX769029       --> ..................................................
FD548053       --> ..................................................

               900    -    950
UN13717        --> GAACACCAAAAGAACAGCATGGATCCCATCTTCAGCCAAAGTCATGCATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX749724       <-- ..................................................
EV548393       <-- ..................................................
EW724502       <-- ..................................................
FD571828       <-- GAACACCAAAAGAACAGCATGGATCCCATCTTCAGCCAAAGTCATGCATC
EX889098       <-- GAACACCAAAAGAACAGCATGGATCCCATCTTCAGCCAAAGTCATGCATC
EX886642       <-- GAAAACCAAAAGAACAGCATGGATCCCATCTTCAGCCAAAGTCATGCATC
EX898435       <-- GAACACCAAAAGAACAGCATGGATCCCATCTTCAGCCAAAGTCATGCATC
EX765235       <-- GAACACCAACAGAACAGCATGGATCCCATCTTCAGCCAAAGTCATGCATC
EY938152       <-- ...gACCAACAGAACAGCATGGATCCCATCTTCAGCCAAAGTCATGCATC
EY917459       --> ..................................................
EY934346       --> ..................................................
EX907733       --> ..................................................
EW728342       --> ..................................................
EX753342       --> ..................................................
FD575591       --> ..................................................
EV544069       --> ..................................................
EX892896       --> ..................................................
FD944313       --> GAAGAC-AACAGAACAGCATGGATCCCATCTTCAGCCAA-GTCATGCATC
EX769029       --> ..................................................
FD548053       --> ..................................................

               950    -   1000
UN13717        --> TCACAATTTCTTTACAGATAAAAGCAGCTGCCATCGACACATCAAACAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX749724       <-- ..................................................
EV548393       <-- ..................................................
EW724502       <-- ..................................................
FD571828       <-- TCACAATTTCTTTACAGATAAAAGCAGCTGCCATCGACACATCAAACAGA
EX889098       <-- TCACAATTTCTTTACAGATAAAAGCAGCTGCCATCGACACATCAAACAGA
EX886642       <-- TCACAATTTCTTTACAGATAAAAGCAGCTGCCATCGACACATCAAACAGA
EX898435       <-- TCACAATTTCTTTACAGATAAAAGCAGCTGCCATCGACACATCAAACAGA
EX765235       <-- TCACAATTTCTTTACAGATAAAAGCAGCCGCCATCGACACATCAAACAGA
EY938152       <-- TCACAATTTCTTTACAGATAAAAGCAGCCGCCATCGACACATCAAACAGA
EY917459       --> ..................................................
EY934346       --> ..................................................
EX907733       --> ..................................................
EW728342       --> ..................................................
EX753342       --> ..................................................
FD575591       --> ..................................................
EV544069       --> ..................................................
EX892896       --> ..................................................
FD944313       --> TCACAATT-CTT-A-AGATAAA-GCAGCCGC-ATCGACACATCAA-CAGA
EX769029       --> ..................................................
FD548053       --> ..................................................

               1000   -   1050
UN13717        --> CCAGGAGTGTCAACGACATTGATGACCTGGCCATCATCTTGAGTAACTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX749724       <-- ..................................................
EV548393       <-- ..................................................
EW724502       <-- ..................................................
FD571828       <-- CCAGGAGTGTCAACGACATTGATGACCTGGCCATCATCTc..........
EX889098       <-- CCAGGAGTGTCAACGACATTGATGACCTGGCCATCATCTTGAGTAACTCT
EX886642       <-- CCAGGAGTGTCAACGACATTGATGACCTGGCCATCATCTTGAGTAACTCT
EX898435       <-- CCAGGAGTGTCAACGACATTGATGACCTGGCCATCATCTTGAGTAACTCT
EX765235       <-- CCAGGAGTATCAACGACATTGATGACCTGGCCATCGTCTTGTGTAACTCT
EY938152       <-- CCAGGAGTATCAACGACATTGATGACCTGGCCATCATCTTGAGTAACTCT
EY917459       --> ..................................................
EY934346       --> ..................................................
EX907733       --> ..................................................
EW728342       --> ..................................................
EX753342       --> ..................................................
FD575591       --> ..................................................
EV544069       --> ..................................................
EX892896       --> ..................................................
FD944313       --> C-AGGAGTATCA-CGACATga.............................
EX769029       --> ..................................................
FD548053       --> ..................................................

               1050   -   1100
UN13717        --> ATGTGACTCGCATGTGGTTGTCACTCCTAGAGTACTAACTCTCGACCTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX749724       <-- ..................................................
EV548393       <-- ..................................................
EW724502       <-- ..................................................
FD571828       <-- ..................................................
EX889098       <-- ATGTGACTCGCATGTGGTTGTCACTCCTAGAGTACTAACTCTCGACCTAA
EX886642       <-- ATGTGACTCGCATGTGGTTGTCACCCCTAGAGTACTAACTCTCGACCTAA
EX898435       <-- ATGTGACTCGCATGTGGTTGTCACTCCTAGAGTACTAACTCTCGACCTAA
EX765235       <-- ATGTGACTCGCATGTGGCTGTCACTCCTAGAGTACTAACTCTCGACCTAA
EY938152       <-- -TGTGACTCGCATGTGGTTGTCACTCCTAGAGTACTAACTCTCGACCTAA
EY917459       --> ..................................................
EY934346       --> ..................................................
EX907733       --> ..................................................
EW728342       --> ..................................................
EX753342       --> ..................................................
FD575591       --> ..................................................
EV544069       --> ..................................................
EX892896       --> ..................................................
FD944313       --> ..................................................
EX769029       --> ..................................................
FD548053       --> ..................................................

               1100   -   1150
UN13717        --> AGGCTTTTGTCCCAAGGATGCTGTTCCCTGTTGCACTCTTTCCGTTTCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX749724       <-- ..................................................
EV548393       <-- ..................................................
EW724502       <-- ..................................................
FD571828       <-- ..................................................
EX889098       <-- AGGCTTTTGTCCCAAGGATGCTGTTCCCTGTTGCACTCTTTCCGTTTCCA
EX886642       <-- AGGCTTTTGTCCCAAGGATGCTGTTCCCTGTCGCACTCTTTCCGTTTCCA
EX898435       <-- AGGCTTTTGTCCCAAGGATGCTGTTCCCTGTTGCACTCTTTCCGTTTCCA
EX765235       <-- AGGCTTTTGTCCCAAGGATGCTGTTCCCTGTTGCACTCTTTCCGTTTCCA
EY938152       <-- AGGCTTTCGTCCCAAGGATGCTGTTCCC-GTTGCACTCTTTCCGTTTCCA
EY917459       --> ..................................................
EY934346       --> ..................................................
EX907733       --> ..................................................
EW728342       --> ..................................................
EX753342       --> ..................................................
FD575591       --> ..................................................
EV544069       --> ..................................................
EX892896       --> ..................................................
FD944313       --> ..................................................
EX769029       --> ..................................................
FD548053       --> ..................................................

               1150   -   1200
UN13717        --> GTACGGCCCACAAGAACTAGGGTTCGAGTAGGGTTTGAGGATGAAGCAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX749724       <-- ..................................................
EV548393       <-- ..................................................
EW724502       <-- ..................................................
FD571828       <-- ..................................................
EX889098       <-- GCACGGCCCACAAGAACTAGGGTTCGAGTAGGGTTTGAGGATGAAGCAAA
EX886642       <-- GTACGGCCCACAAGAACTAGGGTTCGAGTAGGGTTTGAGGATGAAGCAAA
EX898435       <-- GTACGGCCCACAAGAACTAGGGTTCGAGTAGGGTTTGAGGATGAAGCAAA
EX765235       <-- GTACGGCCCACAAGAACTAGGGTTCGAGTAGGGTTTGAGGATGAAGCAAA
EY938152       <-- GTACGGCCCACAAGAACTAGGGTTCGAGTAGGGTTTGAGGATGAAGCAAA
EY917459       --> ..................................................
EY934346       --> ..................................................
EX907733       --> ..................................................
EW728342       --> ..................................................
EX753342       --> ..................................................
FD575591       --> ..................................................
EV544069       --> ..................................................
EX892896       --> ..................................................
FD944313       --> ..................................................
EX769029       --> ..................................................
FD548053       --> ..................................................

               1200   -   1250
UN13717        --> TTCCCAATCATCTTCCATCAAATCTCCACCCATCTTCAACAAACTCATAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX749724       <-- ..................................................
EV548393       <-- ..................................................
EW724502       <-- ..................................................
FD571828       <-- ..................................................
EX889098       <-- TTCCCAATCATCTTCCATCAAATCTCCACCCATCTTCAACAAACTCATAT
EX886642       <-- TTCCCAATCATCTTCCATCAAATCTCCACCCATCTTCAACAAACTCATAT
EX898435       <-- TTCCCAATCATCTTCCATCAAATCTCCACCCATCTTCAACAAACTCATAT
EX765235       <-- TTCCCAATCATCTTCCATCAAATCTCCACCCATCTTCAACAAACTCATAT
EY938152       <-- TTCCCAATCATCTTCCATCAAATCTCCACCCATCTTCAACAAACTCATAT
EY917459       --> ..................................................
EY934346       --> ..................................................
EX907733       --> ..................................................
EW728342       --> ..................................................
EX753342       --> ..................................................
FD575591       --> ..................................................
EV544069       --> ..................................................
EX892896       --> ..................................................
FD944313       --> ..................................................
EX769029       --> ..................................................
FD548053       --> ..................................................

               1250   -   1300
UN13717        --> ACC-TT--CTTGCTTGCAGAGAGAGGAACTAAAACTCAAAGACAGAACAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX749724       <-- ..................................................
EV548393       <-- ..................................................
EW724502       <-- ..................................................
FD571828       <-- ..................................................
EX889098       <-- ACC-TT--CTTGCTTGCAGAGAGAGGAACTAAAACTCAAAGACAGAACAG
EX886642       <-- ACC-TT--CTTGCTTGCAGAGAGAGGAACTAAAAC...............
EX898435       <-- ACC-TT--CTTGCTTGCAGAGAGAGGAACTAAAACTCAAAGACAGAACAG
EX765235       <-- ACC-TTTTCTTGCTTGCAGAGAGAGGAACTAAAACTCAAAGACAGAACAG
EY938152       <-- ACCCTT--CTTGCTTGCAGAGA--GGAACTAAAACTCCAAGACAGAACAG
EY917459       --> ..................................................
EY934346       --> ..................................................
EX907733       --> ..................................................
EW728342       --> ..................................................
EX753342       --> ..................................................
FD575591       --> ..................................................
EV544069       --> ..................................................
EX892896       --> ..................................................
FD944313       --> ..................................................
EX769029       --> ..................................................
FD548053       --> ..................................................

               1300   -   1350
UN13717        --> AACTAGAACTAATCAACAGATCAAAGACAAAC-GATGAGGTAAGAGAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX749724       <-- ..................................................
EV548393       <-- ..................................................
EW724502       <-- ..................................................
FD571828       <-- ..................................................
EX889098       <-- AACTAGAACTAATCAACAGATCAAAGACAAAC-GATGAGGTcc.......
EX886642       <-- ..................................................
EX898435       <-- AACTAGAACTAATCAACAGATCAAAGACAAAC-GATGAGGTcc.......
EX765235       <-- AACTAGAACTAATCAACAGATCAAAGACAAAC-GATcccct.........
EY938152       <-- AACTAGAACCAA-CAACAGATCAAAGACAAACCGATGAGGTAAGAGAGAG
EY917459       --> ..................................................
EY934346       --> ..................................................
EX907733       --> ..................................................
EW728342       --> ..................................................
EX753342       --> ..................................................
FD575591       --> ..................................................
EV544069       --> ..................................................
EX892896       --> ..................................................
FD944313       --> ..................................................
EX769029       --> ..................................................
FD548053       --> ..................................................

               1350   -   1400
UN13717        --> AGAGAGGAGATTTACTTGTTGCTTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~
EX749724       <-- ..........................
EV548393       <-- ..........................
EW724502       <-- ..........................
FD571828       <-- ..........................
EX889098       <-- ..........................
EX886642       <-- ..........................
EX898435       <-- ..........................
EX765235       <-- ..........................
EY938152       <-- AGAGAGGAGATTTACTTGTTGCTTCC
EY917459       --> ..........................
EY934346       --> ..........................
EX907733       --> ..........................
EW728342       --> ..........................
EX753342       --> ..........................
FD575591       --> ..........................
EV544069       --> ..........................
EX892896       --> ..........................
FD944313       --> ..........................
EX769029       --> ..........................
FD548053       --> ..........................