RadishBase

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Alignment for radish unigene UN13762

               1      -     51
UN13762        --> GGAGAGAGAGAGAGAGAGAAGAAGAAGAAAGTTTGTTCCGTTACAGCCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530010       <-- ..................................................
EV546171       <-- ..................................................
EV547288       <-- ..................................................
EW728182       <-- ..................................................
EV545649       <-- ..................................................
EV544021       <-- ..................................................
EV570847       <-- ..................................................
FD974816       <-- ..................................................
EW727805       <-- ..................................................
FD553039       <-- ..................................................
EY912139       <-- ..................................................
EY910015       <-- ..................................................
EV570846       <-- ..................................................
EX777819       <-- ..................................................
FD555175       <-- ..................................................
EX774056       --> GGAGAGAGAGAGAGAGAGAAGAAGAAGAAAGTTTGTTCCGTTACAGCCTC
FD533740       --> ..................................................
EV525202       --> ..................................................
EV548331       --> ..................................................
EV550334       --> ..................................................
EY896706       --> ..................................................
EY940855       --> ..................................................
FD569352       --> ..................................................
EV548176       --> ..................................................
EY922455       --> ..................................................
EY946378       --> ..................................................
FD542831       --> ..................................................
FD964100       --> ..................................................
FD981843       --> ..................................................
FD559476       --> ..................................................
EV565562       --> ..................................................
EV565563       --> ..................................................
EY916461       --> ..................................................
EV552358       --> ..................................................
FD964978       --> ..................................................

               51     -    101
UN13762        --> ACAATTGCAACAAAGTTTCGTATAAAAGAAGACATAAATTTCGCTGGTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530010       <-- ..................................................
EV546171       <-- ..................................................
EV547288       <-- ..................................................
EW728182       <-- ..................................................
EV545649       <-- ..................................................
EV544021       <-- ..................................................
EV570847       <-- ..................................................
FD974816       <-- ..................................................
EW727805       <-- ..................................................
FD553039       <-- ..................................................
EY912139       <-- ..................................................
EY910015       <-- ..................................................
EV570846       <-- ..................................................
EX777819       <-- ..................................................
FD555175       <-- ..................................................
EX774056       --> ACAATTGCAACAAAGTTTCGTATAAAAGAAGACATAAATTTCGCTGGTTC
FD533740       --> ...gggGCAACAAAGTTTCGTATAAAAGAAGACATAAATTTCGCTGGTTC
EV525202       --> ..................................................
EV548331       --> ..................................................
EV550334       --> ..................................................
EY896706       --> ..................................................
EY940855       --> ..................................................
FD569352       --> ..................................................
EV548176       --> ..................................................
EY922455       --> ..................................................
EY946378       --> ..................................................
FD542831       --> ..................................................
FD964100       --> ..................................................
FD981843       --> ..................................................
FD559476       --> ..................................................
EV565562       --> ..................................................
EV565563       --> ..................................................
EY916461       --> ..................................................
EV552358       --> ..................................................
FD964978       --> ..................................................

               101    -    151
UN13762        --> CTCCTTTGTCTGAGGTAACCAGAAAAAAAAA-CTCATTGTCAAATTTCT-
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530010       <-- ..................................................
EV546171       <-- ..................................................
EV547288       <-- ..................................................
EW728182       <-- ..................................................
EV545649       <-- ..................................................
EV544021       <-- ..................................................
EV570847       <-- ..................................................
FD974816       <-- ..................................................
EW727805       <-- ..................................................
FD553039       <-- ..................................................
EY912139       <-- ..................................................
EY910015       <-- ..................................................
EV570846       <-- ..................................................
EX777819       <-- ..................................................
FD555175       <-- ..................................................
EX774056       --> CTCCTTTGTCTGAGGTAACCAGAAAAAAAA--CTCATTGTCAAATTTCTC
FD533740       --> CTCCTTTGTCTGAGGTAACCTGAAAAAAAAAACTCATTGTCAAATTTCT-
EV525202       --> .....ggGTCTGAGGTAACCAGAAAAAAAAAACTCATTGTCAAATTTCT-
EV548331       --> .....ggGTCTGAGGTAACCAGAAAAAAAAA-CTCATTGTCAAATTTCT-
EV550334       --> .....ggGTCTGAGGTAACCAGAAAAAAAAA-CTCATTGTCAAATTTCT-
EY896706       --> .....ggGTCTGAGGTAACCAGAAAAAAAAA-CTCATTGTCAAATTTCT-
EY940855       --> .....ggGTCTGAGGTAACCAGAAAAAAAAA-CTCATTGTCAAATTTCT-
FD569352       --> .....ggGTCTGAGGTAACCAGAAAAAAAAA-CTCATTGTCAAATTTCT-
EV548176       --> ...............ggaaCAGAAAAAAAAA-CTCATTGTCAGATTTCT-
EY922455       --> ..................................................
EY946378       --> ..................................................
FD542831       --> ..................................................
FD964100       --> ..................................................
FD981843       --> ..................................................
FD559476       --> ..................................................
EV565562       --> ..................................................
EV565563       --> ..................................................
EY916461       --> ..................................................
EV552358       --> ..................................................
FD964978       --> ..................................................

               151    -    201
UN13762        --> -TTTCTTTTTTTT-C-TTTTGTGGGTTTCCTTCTTTAATTGCTTCCTCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530010       <-- ................cTTTGTGGGGTTC-TTCTTTAATTGCTTCCTCAG  Raphanus raphanistrum subsp. maritimus
EV546171       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV547288       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW728182       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV545649       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV544021       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV570847       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD974816       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW727805       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD553039       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY912139       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY910015       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV570846       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX777819       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD555175       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX774056       --> TTTTCTTTTTTTT-C-TTTTGTGGGTTTCCTTCTTTAATTGCTTCCTCAG  Raphanus raphanistrum subsp. landra
FD533740       --> -TTTCTTTTTTTTTC-TTTTGTGGGGTTCCTTCTTTAATTGCTTCCCCAG  Raphanus raphanistrum subsp. maritimus
EV525202       --> -TTTCTTTTTTTT-C-TTTTGTGGGGTTCCTTCTTTAATTGCTTCCTCAG  Raphanus raphanistrum subsp. maritimus
EV548331       --> -TTT-TCTTTTTT-C-TTTTGTGGGTTTCCTTCTTTAATTGCTTCCTCAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV550334       --> -TTT-TCTTTTTT-C-TTTTGTGGGTTTCCTTCTTTAATTGCTTCCTCAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY896706       --> -TTTCTTTTTTTT-CCTTTTGTGGGGTTCCTTCTTTAATTGCTTCCTCAG  Raphanus raphanistrum subsp. maritimus
EY940855       --> -TTTCTTTTTTTTTC-TTTTGTGGGGTTCCTTCTTTAATTGCTTCCTCAG  Raphanus sativus cv Early Scarlet Globe
FD569352       --> -TTTCTTTTTTTT-C-TTTTGTGGGGTTCCTTCTTTAATTGCTTCCTCAG  Raphanus sativus cv Early Scarlet Globe
EV548176       --> -TTT----TTTTT-C-TTTTGTGGGTTTCCTTCTTTAATTGCTTCCTCGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY922455       --> ....................GTGGGTTTCCTTCTTTAATTGCTTCCTCAG  Raphanus raphanistrum subsp. landra
EY946378       --> ....................GTGGGGTTCCTTCTTTAATTGCTTCCTCAG  Raphanus sativus cv Rat-Tail Radish #3870
FD542831       --> ....................GTGGGTTTCCTTCTTTAATTGCTTCCTCGG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD964100       --> ....................GTGGGGTTCCTTCTTTAATTGCTTCCTCAG  Raphanus raphanistrum subsp. maritimus
FD981843       --> ....................GTGGGTTTCCT-CTTTAATTGCTTCCTCGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD559476       --> ....................ggGGGTTTCCTTCTTTAATTGCTTCCTCAG  Raphanus raphanistrum subsp. landra
EV565562       --> ..................................................  Raphanus raphanistrum subsp. landra
EV565563       --> ..................................................  Raphanus raphanistrum subsp. landra
EY916461       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV552358       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD964978       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               201    -    251
UN13762        --> ACGAGCTCTTGATCTGGTTCACTTATTAGGATCCTGGAGAGGAGGAAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530010       <-- ACGAGCTCTTGATCTGGTTCACTTATTAGGATCCTGGAGAGGAGGAAACA  Raphanus raphanistrum subsp. maritimus
EV546171       <-- ......................gtctgAGGATCCTGGAGAGGAGGAA-CA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV547288       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW728182       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV545649       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV544021       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV570847       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD974816       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW727805       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD553039       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY912139       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY910015       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV570846       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX777819       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD555175       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX774056       --> ACGAGCTCTTGATCTGGTTCA--T-TTAGGATCCTGGAGAGGAGGAAACA  Raphanus raphanistrum subsp. landra
FD533740       --> ACGAGCTCTTGATCTGGTTCGCTTATTAGGATCCTGGAGAGGAGGAAACA  Raphanus raphanistrum subsp. maritimus
EV525202       --> ACGAGCTCTTGATCTGGTTCACTTATTAGGATCCTGGAGAGGAGGAAACA  Raphanus raphanistrum subsp. maritimus
EV548331       --> ACGAGCTCTTGATCTGGTTCATTTATTAGGATCCTGGAGAGGAGGAAACA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV550334       --> ACGAGCTCTTGATCTGGTTCATTTATTAGGATCCTGGAGAGGAGGAAACA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY896706       --> ACGAGCTCTTGATCTGGTTCACTTATTAGGATCCTGGAGAGGAGGAAACA  Raphanus raphanistrum subsp. maritimus
EY940855       --> ACGAGCTCTTGATCTGGTTCACTTATTAGGATCCTGGAGAGGAGGAAACA  Raphanus sativus cv Early Scarlet Globe
FD569352       --> ACGAGCTCTTGATCTGGTTCACTTATTAGGATCCTGGAGAGGAGGAAACA  Raphanus sativus cv Early Scarlet Globe
EV548176       --> ACGAGCTCTTGATCTGGTTCATTTATTAGGATCCTGGAGAGGAGGAAACA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY922455       --> ACGAGCTCTTGATCTGGTTCA--T-TTAGGATCCTGGAGAGGAGGAAACA  Raphanus raphanistrum subsp. landra
EY946378       --> ACGAGCTCTTGATCTGGTTCACTTATTAGGATCCTGGAGAGGAGGAGACA  Raphanus sativus cv Rat-Tail Radish #3870
FD542831       --> ACGAGCTCTTGATCTGGTTCATTTATTAGGATCCTGGAGAGGAGGAAACA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD964100       --> ACGAGCTCTTGATCTGATTCACTTATTAGGATCCTGGAGAGGAGGAAACA  Raphanus raphanistrum subsp. maritimus
FD981843       --> ACGAGCTCTTGATCTGGTTCATTTATTAGGATCCTGGAGAGGAGGAAACA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD559476       --> ACGAGCTCTTGATCTGGTTCA--T-TTAGGATCCTGGAGAGGAGGAAACA  Raphanus raphanistrum subsp. landra
EV565562       --> ...................................GGAGAGGAGGAAACA  Raphanus raphanistrum subsp. landra
EV565563       --> ....................................GAGAGGAGGAAACA  Raphanus raphanistrum subsp. landra
EY916461       --> .................................................g  Raphanus raphanistrum subsp. raphanistrum (NY)
EV552358       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD964978       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               251    -    301
UN13762        --> ACAAACAAACAAAAAAA-CCCCAAAA-A--AGAAAGAGAGAGAGA--AAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530010       <-- ACAAAC----AAAAAAA-CCCCAAAA-A--AGAAAGAGAGAGAGA--AAA  Raphanus raphanistrum subsp. maritimus
EV546171       <-- ACAAACAA--AAAAAAA-CCCCAAAA-A--AGAAAGAGAGAGAGA--AAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV547288       <-- ....ggAAACAAAAAAAAACCCAAAA-A--AGAAAGAGAGAGAGA--AAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW728182       <-- ............AAAAT-CCCAAAAAGA--AGAAAGAGAGAGAGA--AAA  Raphanus sativus cv Early Scarlet Globe
EV545649       <-- .............AAAA-ACCCAAAA-A--AGAAAGAGAGAGAGA--AAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV544021       <-- ......................AAAA-A--AGAAAGAGAGAGAGA--AAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV570847       <-- ...................caaAAAG-A--AGAAAGAGAGAGAGA--AAA  Raphanus raphanistrum subsp. landra
FD974816       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW727805       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD553039       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY912139       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY910015       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV570846       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX777819       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD555175       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX774056       --> ACAAACAAACAAAAAAA-TCCCAAAA-AGAAGAAAGAGAGAGAGA--AAA  Raphanus raphanistrum subsp. landra
FD533740       --> ACAAACAAA--AAAAAA-CCCCAAAA-A--AGAAAGAGAGAGAGA--AAA  Raphanus raphanistrum subsp. maritimus
EV525202       --> ACAAACAAA----AAAA-CCCCAAAA-A--AGAAAGAGAGAGAGA--AAA  Raphanus raphanistrum subsp. maritimus
EV548331       --> ACAAACAAA---AAAAA-CCC-AAAA-A--AGAAAGAGAGAGAGA--AAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV550334       --> ACAAACAAA--AAAAAA-CCC-AAAA-A--AGAAAGAGAGAGAGA--AAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY896706       --> ACAAACAAA--AAAAAA-CCCCAAAA-A--AGAAAGAGAGAGAGA--AAA  Raphanus raphanistrum subsp. maritimus
EY940855       --> ACAAACAAA--AAAAAA-CCCCAAAA-A--AGAAAGAGAGAGAGA--AAA  Raphanus sativus cv Early Scarlet Globe
FD569352       --> ACAAACAAA--AAAAAA-CCCCAAAA-A--AGAAAGAGAGAGAGA--AAA  Raphanus sativus cv Early Scarlet Globe
EV548176       --> ACAAACAAACAAAAAA--CCCCAAAA-A--AGAAAGAGAGAGAGA--AAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY922455       --> ACAAACAAACAAAAAAA-TCCCAAAA-AGAAGAAAGAGAGAGAGA--AAA  Raphanus raphanistrum subsp. landra
EY946378       --> ACAAACAAA---AAAAA-CCCCAAAA-A--AGAAAGAGAGAGAGA--AAA  Raphanus sativus cv Rat-Tail Radish #3870
FD542831       --> ACAAACAAA----AAAA-GCCCAAAA-A--AGAAAGAGAGAGAGAGAAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD964100       --> ACAAACAAA--AAAAAA-CCCCAAAA-A--AGAAAGAGAGAGAGA--AAA  Raphanus raphanistrum subsp. maritimus
FD981843       --> ACAAACAAACAAAAA---CCCCAAAA-A--AGAAAGAGAGAGAGAGAAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD559476       --> ACAAACAAACAAAAAAA-TCCCAAAA-AGAAGAAAGAGAGAGAGA--AAA  Raphanus raphanistrum subsp. landra
EV565562       --> ACAAACAAGCAAAAAAA-TCCCAAAA-AGAAGAAAGAGAGAGAGA--AAA  Raphanus raphanistrum subsp. landra
EV565563       --> ACAAACAAGCAAAAAAA-TCCAAAAAGA--AGAAAGAGAGAGAGA--AAA  Raphanus raphanistrum subsp. landra
EY916461       --> gaAAACAAACAAAAAA--CCCCAAAA-A--AGAAAGAGAGAGAGA--AAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV552358       --> ....ggAAACAAAAAAAAACCCAAAA-A--AGAAAGAGAGAGAGA--AAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD964978       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               301    -    351
UN13762        --> CAAAAAAGAATGTCTTTCACAGGAACTACTGACAAATGCAATGCTTGCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530010       <-- CAAAAAAGAATGTCTTTCACAGGAACTACTGACAAATGCAATGCTTGCGA  Raphanus raphanistrum subsp. maritimus
EV546171       <-- CAAAAAAGAATGTCTTTCACAGGAACTACTGACAAATGCAATGCTTGCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV547288       <-- CAAAAAAGAATGTCTTTCACAGGAACTACTGACAAATGCAATGCTTGCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW728182       <-- CAAAAAAAAATGTCTTTCACAGGAACTACTGACAAATGCAATGCTTGCGA  Raphanus sativus cv Early Scarlet Globe
EV545649       <-- CAAAAAAGAATGTCTTTCACAGGAACTACTGACAAATGCAATGCTTGCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV544021       <-- CAAAAAAGAATGTCTTTCACAGGAACTACTGACAAATGCAATGCTTGCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV570847       <-- CAAAAAA-AATGTCTTTCACAGGAACTACTGACAAATGCAATGCTTGCGA  Raphanus raphanistrum subsp. landra
FD974816       <-- .......GAATGTCTTTCACAG-AACTACTGACAAATGCAATGCTTGCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW727805       <-- ..........TGTCTTTCACAGGAACTACTGACAAATGCAATGCTTGCGA  Raphanus sativus cv Early Scarlet Globe
FD553039       <-- ...................CAGGAACTACTGACAAATGCAATGCTTGCGA  Raphanus raphanistrum subsp. landra
EY912139       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY910015       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV570846       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX777819       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD555175       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX774056       --> CAAAAAA-AATGTCTTTCACAGGAACTACTGACAAATGCAATGCTTGCGA  Raphanus raphanistrum subsp. landra
FD533740       --> CAAAAAAGAATGTCTTTCACAGGAACTACTGACAAATGCAATGCTTGCGA  Raphanus raphanistrum subsp. maritimus
EV525202       --> CAAAAAAGAATGTCTTTCACAGGAACTACTGACAAATGCAATGCTTGCGA  Raphanus raphanistrum subsp. maritimus
EV548331       --> CAAAAAAGAATGTCTTTCACAGGAACTACTGACAAATGCAATGCTTGCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV550334       --> CAAAAAAGAATGTCTTTCACAGGAACTACTGACAAATGCAATGCTTGCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY896706       --> CAAAAAAGAATGTCTTTCACAGGAACTACTGACAAATGCAATGCTTGCGA  Raphanus raphanistrum subsp. maritimus
EY940855       --> CAAAAAAGAATGTCTTTCACAGGAACTACTGACAAATGCAATGCTTGCGA  Raphanus sativus cv Early Scarlet Globe
FD569352       --> CAAAAAAGAATGTCTTTCA--TGAACTACTGACAAATGCAATGCTTGCGA  Raphanus sativus cv Early Scarlet Globe
EV548176       --> CAAAAAAGAATGTCTTTCACAGGAACAACTGACAAATGCAATGCTTGCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY922455       --> CAAAAAA-AATGTCTTTCACAGGAACTACTGACAAATGCAATGCTTGCGA  Raphanus raphanistrum subsp. landra
EY946378       --> CAAAAAAGAATGTCTTTCACAGGAACTACTGACAAATGCAATGCTTGCGA  Raphanus sativus cv Rat-Tail Radish #3870
FD542831       --> CAAAAAAGAATGTCTTTCACAGGAACTACTGACAAATGCAATGCTTGTGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD964100       --> CAAAAAAGAATGTCTTTCACAGGAACTACTGACAAATGCAATGCTTGCGA  Raphanus raphanistrum subsp. maritimus
FD981843       --> CAAAAAAGAATGTCTTTCACAGGAACTACTGACAAATGCAATGCTTGCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD559476       --> CAAAAAA-AATGTCTTTCACAGGAACTACTGACAAATGCAATGCTTGCGA  Raphanus raphanistrum subsp. landra
EV565562       --> CAAAAAA-AATGTCTTTCACAGGAACTACTGACAAATGCAATGCTTGCGA  Raphanus raphanistrum subsp. landra
EV565563       --> CAAAAAA-AATGTCTTTCACAGGAACTACTGACAAATGCAATGCTTGCGA  Raphanus raphanistrum subsp. landra
EY916461       --> CAAAAAAGAATGTCTTTCACAGGAACTACTGACAAATGCAATGCTTGCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV552358       --> CAAAAAAGAATGTCTTTCACAGGAACTACTGACAAATGCAATGCTTGCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD964978       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               351    -    401
UN13762        --> TAAGACAGTCTATGTGATGGACATGTTGTCCATTGAAGGAATGCCTTACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530010       <-- TAAGACAGTCTATGTGATGGACATGTTGTCCATTGAGGGAATGCCTTACC
EV546171       <-- TAAGACAGTCTATGTGATGGACATGTTGTCCATTGAAGGAATGCCTTACC
EV547288       <-- TAAGACAGTCTATGTGATGGACATGTTGTCCATTGAAGGAATGCCTTACC
EW728182       <-- TAAGACAGTCTATGTGATGGACATGTTGTCCATTGAAGGAATGCCTTACC
EV545649       <-- TAAGCCAGTCTATGTGATGGACATGTTGTCCATTGAAGGAATGCCTTACC
EV544021       <-- TAAGACAGTCTATGTGATGGACATGTTGTCCATTGAAGGAATGCCTTACC
EV570847       <-- TAAGACAGTCTATGTGATGGACATGTTGTCCATTGAAGGAATGCCTTACC
FD974816       <-- TAAGACAGTCTATGTGATGGACATGTTGTCCATTGAAGGAATGCCTTACC
EW727805       <-- TAAGACAGTCTATGTGATGGACATGTTGTCCATTGAAGGAATGCCTTACC
FD553039       <-- TAAGACAGTCTATGTGATGGACATGTTGTCCATTGAAGGAATGCCTTACC
EY912139       <-- .....................................GGAATGCCTTACC
EY910015       <-- ..................................................
EV570846       <-- ..................................................
EX777819       <-- ..................................................
FD555175       <-- ..................................................
EX774056       --> TAAGACAGTCTATGTGATGGACATGTTGTCCATTGAAGGAATGCCTTACC
FD533740       --> TAAGACAGTCTATGTGATGGACATGTTGTCCATTGAAGGAATGCCTTACC
EV525202       --> TAAGACAGTCTATGTGATGGACATGTTGTCCATTGAGGGAATGCCTTACC
EV548331       --> TAAGACAGTCTATGTGATGGACATGTTGTCCATTGAAGGAATGCCTTACC
EV550334       --> TAAGCCAGTCTATGTGATGGACATGTTGTCCATTGAAGGAATGCCTTACC
EY896706       --> TAAGACAGTCTATGTGATGGACATGTTGTCCATTGAAGGAATGCCTTACC
EY940855       --> TAAGACAGTCTATGTGATGGACATGTTGTCCATTGAAGGAATGCCTTACC
FD569352       --> TAAGACAGTCTATGTGATGGACATGTTGTCCATTGAAGGAATGCCCTACC
EV548176       --> TAAGACAGTCTATGTGATGGACATGTTGTCCATTGAAGGAATGCCTTACC
EY922455       --> TAAGACAGTCTATGTGATGGACATGTTGTCCATTGAAGGAATGCCTTACC
EY946378       --> TAAGACAGTCTATGTGATGGACATGTTGTCCATTGAAGGAATGCCTTACC
FD542831       --> TAAGACAGTCTATGTGATGGACATGTTGTCCATTGAAGGAATGCCTTACC
FD964100       --> TAAGACAGTCTATGTGATGGACATGTTGTCCATTGAAGGAATGCCTTACC
FD981843       --> TAAGACAGTCTATGTGATGGACATGTTGTCCATTGAAGGAATGCCTTACC
FD559476       --> TAAGACAGTCTATGTGATGGACATGTTGTCCATTGAAGGAATGCCTTACC
EV565562       --> TAAGACAGTCTATGTGATGGACATGTTGTCCATTGAAGGAATGCCTTACC
EV565563       --> TAAGACAGTCTATGTGATGGACATGTTGTCCATTGAAGGAATGCCTTACC
EY916461       --> TAAGACAGTCTATGTGATGGACATGTTGTCCATTGAAGGAATGCCTTACC
EV552358       --> TAAGACAGTCTATGTGATGGACATGTTGTCCATTGAAGGAATGCCTTACC
FD964978       --> ..................................................

               401    -    451
UN13762        --> ACAAGTCTTGCTTCAAATGCACCCATTGCAAAGGCACCCTTGTGATGAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530010       <-- ACAAGTCTTGCTTCAAATGCACCCATTGCAAAGGCACCCTTGTGATGAGC  Raphanus raphanistrum subsp. maritimus
EV546171       <-- ACAAGTCTTGCTTCAAATGCACCCATTGCAAAGGCACCCTTGTGATGAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV547288       <-- ACAAGTCTTGCTTCAAATGCACCCATTGCAAAGGCACCCTTGTGATGAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW728182       <-- ACAAGTCTTGCTTCAAGTGTACCCATTGCAAAGGCACCCTTGTGATGAGC  Raphanus sativus cv Early Scarlet Globe
EV545649       <-- ACAAGTCTTGCTTCAAATGCACCCATTGCAAAGGCACCCTTGTGATGAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV544021       <-- ACAAGTCTTGCTTCAAATGCACCCATTGCAAAGGCACCCTTGTGATGAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV570847       <-- ACAAGTCTTGCTTCAAGTGTACCCATTGCAAAGGCACCCTTGTGATGAGC  Raphanus raphanistrum subsp. landra
FD974816       <-- ACAAGTCTTGCTTCAAATGCACCCATTGCAAAGGCACCCTTGTGATGAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW727805       <-- ACAAGTCTTGCTTCAAGTGTACCCATTGCAAAGGCACCCTTGTGATGAGC  Raphanus sativus cv Early Scarlet Globe
FD553039       <-- ACAAGTCTTGCTTCAAGTGTACCCATTGCAAAGGCACCCTTGTGATGAGC  Raphanus raphanistrum subsp. landra
EY912139       <-- ACAAGTCTTGCTTCAAATGCACCCATTGCAAAGGCACCCTTGTGATGAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY910015       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV570846       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX777819       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD555175       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX774056       --> ACAAGTCTTGCTTCAAGTGTACCCATTGCAAAGGCACCCTTGTGATGAGC  Raphanus raphanistrum subsp. landra
FD533740       --> ACAAGTCTTGCTTCAAATGCACCCATTGCAAAGGCACCCTTGTGATGAGC  Raphanus raphanistrum subsp. maritimus
EV525202       --> ACAAGTCTTGCTTCAAATGCACCCATTGCAAAGGCACCCTTGTGATGAGC  Raphanus raphanistrum subsp. maritimus
EV548331       --> ACAAGTCTTGCTTCAAATGCACCCATTGCAAAGGCACCCTTGTGATGAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV550334       --> ACAAGTCTTGCTTCAAATGCACCCATTGCAAAGGCACCCTTGTGATGAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY896706       --> ACAGGTCTTGCTTCAAATGCACCCATTGCAAAGGCACCCTTGTGATGAGC  Raphanus raphanistrum subsp. maritimus
EY940855       --> ACAAGTCTTGCTTCAAATGCACCCATTGCAAAGGCACCCTTGTGATGAGC  Raphanus sativus cv Early Scarlet Globe
FD569352       --> ACAAGTCTTGCTTCAAATGCACCTATTGCAAAGGCACCCTTGTGATGAGC  Raphanus sativus cv Early Scarlet Globe
EV548176       --> ACAAGTCTTGCTTCAAATGCACCCATTGCAAAGGCACCCTTGTGATGAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY922455       --> ACAAGTCTTGCTTCAAGTGTACCCATTGCAAAGGCACCCTTGTGATGAGC  Raphanus raphanistrum subsp. landra
EY946378       --> ACAAGTCTTGCTTCAAATGCACCCATTGCAAAGGCACCCTTGTGATGAGC  Raphanus sativus cv Rat-Tail Radish #3870
FD542831       --> ACAAGTCTTGCTTCAAATGCACCCATTGCAAAGGCACCCTCGTGATGAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD964100       --> ACAAGTCTTGCTTCAAATGCACCCATTGCAAAGGCACCCTTGTGATGAGC  Raphanus raphanistrum subsp. maritimus
FD981843       --> ACAAGTCTTGCTTCAAATGCACCCATTGCAAAGGCACCCTTGTGATGAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD559476       --> ACAAGTCTTGCTTCAAGTGTACCCATTGCA-TGGCACCCTTGTGATGAGC  Raphanus raphanistrum subsp. landra
EV565562       --> ACAAGTCTTGCTTCAAGTGTACCCATTGCAAAGGCACCCTTGTGATGAGC  Raphanus raphanistrum subsp. landra
EV565563       --> ACAAGTCTTGCTTCAAGTGTACCCATTGCAAAGGCACCCTTGTGATGAGC  Raphanus raphanistrum subsp. landra
EY916461       --> ACAAGTCTTGCTTCAAATGCACCCATTGCAAAGGCACCCTTGTGATGAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV552358       --> ACAAGTCTTGCTTCAAATGCACCCATTGCAAAGGCACCCTTGTGATGAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD964978       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               451    -    501
UN13762        --> AACTATTCATCCATGGACGGAGTCTTGTACTGCAAGACTCATTTTGAGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530010       <-- AACTATTCATCCATGGACGGAGTCTTGTACTGCAAGACTCATTTTGAGCA  Raphanus raphanistrum subsp. maritimus
EV546171       <-- AACTATTCATCCATGGACGGAGTCTTGTACTGCAAGACTCATTTTGAGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV547288       <-- AACTATTCATCCATGGACGGAGTCTTGTACTGCAAGACTCATTTTGAGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW728182       <-- AACTATTCATCCATGGATGGAGTCTTGTACTGCAAGACTCATTTTGAGCA  Raphanus sativus cv Early Scarlet Globe
EV545649       <-- AACTATTCATCCATGGACGGAGTCTTGTACTGCAAGACTCATTTTGAGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV544021       <-- AACTATTCATCCATGGACGGAGTCTTGTACTGCAAGACTCATTTTGAGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV570847       <-- AACTATTCATCCATGGATGGAGTCTTGTACTGCAAGACTCATTTTGAGCA  Raphanus raphanistrum subsp. landra
FD974816       <-- AACTATTCATCCATGGACGGAGTCTTGTACTGCAAGACTCATTTTGAGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW727805       <-- AACTATTCATCCATGGATGGAGTCTTGTACTGCAAGACTCATTTTGAGCA  Raphanus sativus cv Early Scarlet Globe
FD553039       <-- AACTATTCATCCATGGATGGAGTCTTGTACTGCAAGACTCATTTTGAGCA  Raphanus raphanistrum subsp. landra
EY912139       <-- AACTATTCATCCATGGACGGAGTCTTGTACTGCAAGACTCATTTTGAGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY910015       <-- .................................AAGACTCATTTTGAGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV570846       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX777819       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD555175       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX774056       --> AACTATTCATCCATGGATGGAGTCTTGTACTGCAAGACTCATTTTGAGCA  Raphanus raphanistrum subsp. landra
FD533740       --> AACTATTCATCCGTGGACGGAGTCTTGTACTGCAAGACTCATTTTGAGCA  Raphanus raphanistrum subsp. maritimus
EV525202       --> AACTATTCATCCATGGACGGAGTCTTGTACTGCAAGACTCATTTTGAGCA  Raphanus raphanistrum subsp. maritimus
EV548331       --> AACTATTCATCCATGGACGGAGTCTTGTACTGCAAGACTCATTTTGAGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV550334       --> AACTATTCATCCATGGACGGAGTCTTGTACTGCAAGACTCATTTTGAGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY896706       --> AACTATTCATCCATGGACGGAGTCTTGTACTGCAAGACTCATTTTGAGCA  Raphanus raphanistrum subsp. maritimus
EY940855       --> AACTATTCATCCATGGACGGAGTCTTGTACTGCAAGACTCATTTTGAGCA  Raphanus sativus cv Early Scarlet Globe
FD569352       --> AACTATTCATCCATGGACGGAGTCTTGTACTGCAAGACTCATTTTGAGCA  Raphanus sativus cv Early Scarlet Globe
EV548176       --> AACTATTCATCCATGGACGGAGTCTTGTACTGCAAGACTCATTTTGAGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY922455       --> AACTATTCATCCATGGATGGAGTCTTGTACTGCAAGACTCATTTTGAGCA  Raphanus raphanistrum subsp. landra
EY946378       --> AACTATTCATCCATGGACGGAGTCTTGTACTGCAAGACTCATTTTGAGCA  Raphanus sativus cv Rat-Tail Radish #3870
FD542831       --> AACTATTCATCCATGGACGGAGTCTTGTACTGCAAGACTCATTTTGAGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD964100       --> AACTATTCATCCATGGACGGAGTCTTGTACTGCAAGACTCATTTTGAGCA  Raphanus raphanistrum subsp. maritimus
FD981843       --> AACTATTCATCCATGGACGGAGTCTTGTACTGCAAGACTCATTTTGAGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD559476       --> AACTATTCATCCATGGATGGAGTCTTGTACTGCAAGACTCATTTTGAGCA  Raphanus raphanistrum subsp. landra
EV565562       --> AACTATTTATCCATGGATGGAGTCTTGTACTGCAAGACTCATTTTGAGCA  Raphanus raphanistrum subsp. landra
EV565563       --> AACTATTCATCCATGGATGGAGTCTTGTACTGCAAGACTCATTTTGAGCA  Raphanus raphanistrum subsp. landra
EY916461       --> AACTATTCATCCATGGACGGAGTCTTGTACTGCAAGACTCATTTTGAGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV552358       --> AACTATTCATCCATGGACGGAGTCTTGTACTGCAAGACTCATTTTGAGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD964978       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               501    -    551
UN13762        --> ACTCTTCAAGGAATCTGGCAATTTCAGCAAAAATTTCCAACCAGGAAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530010       <-- ACTCTTCAAGGAATCTGGCAATTTCAGCAAAAATTTCCAACCAGGAAAAA
EV546171       <-- ACTCTTCAAGGAATCTGGCAATTTCAGCAAAAATTTCCAACCAGGAAAAA
EV547288       <-- ACTCTTCAAGGAATCTGGCAATTTCAGCAAAAATTTCCAACCAGGAAAAA
EW728182       <-- ACTCTTCAAGGAATCTGGCAATTTCAGCAAAAATTTCCAACCAGGAAAAA
EV545649       <-- ACTCTTCAAGGAATCTGGCAATTTCAGCAAAAATTTCCAACCAGGAAAAA
EV544021       <-- ACTCTTCAAGGAATCTGGCAATTTCAGCAAAAATTTCCAACCAGGAAAAA
EV570847       <-- ACTCTTCAAGGAATCTGGCAATTTCAGCAAAAATTTCCAACCAGGAAAAA
FD974816       <-- ACTCTTCAAGGAATCTGGCAATTTCAGCAAAAATTTCCAACCAGGAAAAA
EW727805       <-- ACTCTTCAAGGAATCTGGCAATTTCAGCAAAAATTTCCAACCAGGAAAAA
FD553039       <-- ACTCTTCAAGGAATCTGGCAATTTCAGCAAAAATTTCCAACCAGGAAAAA
EY912139       <-- ACTCTTCAAGGAATCTGGCAATTTCAGCAAAAATTTCCAACCAGGAAAAA
EY910015       <-- ACTCTTCAAGGAATCTGGCAATTTCAGCAAAAATTTCCAACCAGGAAAAA
EV570846       <-- ..................................................
EX777819       <-- ..................................................
FD555175       <-- ..................................................
EX774056       --> ACTCTTCAAGGAATCTGGCAATTTCAGCAAAAATTTCCAATCAGGAAAAA
FD533740       --> ACTCTTCAAGGAATCTGGCAATTTCAGCAAAAATTTCCAACCAGGAAAAA
EV525202       --> ACTCTTCAAGGAATCTGGCAATTTCAGCAAAAATTTCCAACCAGGAAAAA
EV548331       --> ACTCTTCAAGGAATCTGGCAATTTCAGCAAAAATTTCCAACCAGGAAAAA
EV550334       --> ACTCTTCAAGGAATCTGGCAATTTCAGCAAAAATTTCCAACCAGGAAAAA
EY896706       --> ACTCTTCAAGGAATCTGGCAATTTCAGCAAAAATTTCCAACCAGGAAAAA
EY940855       --> ACTCTTCAAGGAATCTGGCAATTTCAGCAAAAATTTCCAACCAGGAAAAA
FD569352       --> ACTCTTCAAGGAATCTGGCAATTTCAGCAAAAATTTCCAACCAGGAAAAA
EV548176       --> ACTCTTCAAGGAATCTGGCAATTTCAGCAAAAATTTCCAACCAGGAAAAA
EY922455       --> ACTCTTCAAGGAATCTGGCAATTTCAGCAAAAATTTCCAACCAGGAAAAA
EY946378       --> ACTCTTCAAGGAATCTGGCAATTTCAGCAAAAATTTCCAACCAGGAAAAA
FD542831       --> ACTCTTCAAGGAATCTGGCAATTTCAGCAAAAATTTCCAGCCAGGAAAAA
FD964100       --> ACTCTTCAAGGAATCTGGTAATTTCAGCAAAAATTTCCAACCAGGAAAAA
FD981843       --> ACTCTTCAAGGAATCTGGCAATTTCAGCAAAAATTTCCAACCAGGAAAAA
FD559476       --> ACTCTTCAAGGAATCTGGCAATTTCAGCAAAAATTTCCAACCAGGAAAAA
EV565562       --> ACTCTTCAAGGAATCTGGCAATTTCAGCAAAAATTTCCAACCAGGAAAAA
EV565563       --> ACTCTTCAAGGAATCTGGCAATTTCAGCAAAAATTTCCAACCAGGAAAAA
EY916461       --> ACTCTTCAAGGAATCTGGCAATTTCAGCAAAAATTTCCAACCAGGAAAAA
EV552358       --> ACTCTTCAAGGAATCTGGCAATTTCAGCAAAAATTTCCAACCAGGAAAAA
FD964978       --> ..................................................

               551    -    601
UN13762        --> CTGAGAAGCCGGAGCAGAATAAGACTCCAAGCAAGATATCTTCAATCTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530010       <-- CTGAGAAGCCGGAGCAGAATAAGACTCCAAGCAAGATATCTTCAATCTTC
EV546171       <-- CTGAGAAGCCGGAGCAGAATAAGACTCCAAGCAAGATATCTTCAATCTTC
EV547288       <-- CTGAGAAGCCGGAGCAGAATAAGACTCCAAGCAAGATATCTTCAATCTTC
EW728182       <-- CTGAGAAGCCGGAGCAGAATAAGACTCCAAGCAAGATATCTTCAATCTTC
EV545649       <-- CTGAGAAGCCGGAGCAGAATAAGACTCCAGGCAAGATATCTTCAATCTTC
EV544021       <-- CTGAGAAGCCGGAGCAGAATAAGACTCCAAGCAAGATATCTTCAATCTTC
EV570847       <-- CTGAGAAGCCGGAGCAGAATAAGACTCCAAGCAAGATATTTTCAATTTTT
FD974816       <-- CTGAGAAGCCGGAGCAGAATAAGACTCCAAGCAAGATATCTTCAATCTTC
EW727805       <-- CTGAGAAGCCGGAGCAGATTAAGACTCCAAGCAAGATATCTTCAATCTTC
FD553039       <-- CTGAGAAGCCGGAGCAGAATAAGACTCCAAGCAAGATATTTTCAATTTTT
EY912139       <-- CTGAGAAGCCGGAGCAGAATAAGACTCCAAGCAAGATACCTTCAATCTTC
EY910015       <-- CTGAGAAGCCGGAGCAGAATAAGACTCCAAGCAAGATATCTTCAATCTTC
EV570846       <-- ..................................................
EX777819       <-- ..................................................
FD555175       <-- ..................................................
EX774056       --> CTGAGAAGCCGGAGCAGAATAAGACTCCAAGCAAGATATCTTCAATCTTC
FD533740       --> CTGAGAAGCCGGAGCAGAATAAGACTCCAAGCAAGATATCTTCAATCTTC
EV525202       --> CTGAGAAGCCGGAGCAGAATAAGACTCCAAGCAAGATATCTTCAATCTTC
EV548331       --> CTGAGAAGCCGGAGCAGAATAAGACTCCAAGCAAGATATCTTCAATCTTC
EV550334       --> CTGAGAAGCCGGAGCAGAATAAGACTCCAGGCAAGATATCTTCAATCTTC
EY896706       --> CTGAGAAGCCGGAGCAGAATAAGACTCCAAGCAAGATATCTTCAATCTTC
EY940855       --> CTGAGAAGCCGGAGCAGAATAAGACTCCAAGCAAGATATCTTCAATCTTC
FD569352       --> CTGAGAAGCCGGAGCAGAATAAGACTCCAAGCAAGATATCTTCAATCTTC
EV548176       --> CTGAGAAGCCGGAGCAGAATAAGACTCCAAGCAAGATATCTTCAATCTTC
EY922455       --> CTGAGAAGCCGGAGCAGAATAAGACTCCAAGCAAGATATCTTCAATCTTC
EY946378       --> CTGAGAAGCCGGAGCAGAATAAGACTCCAAGCAAGATATCTTCAATCTTC
FD542831       --> CTGAGAAGCCGGAGCAGAATAAGACTCCAAGCAAGATATCTTCAATCTTC
FD964100       --> CTGAGAAGCCGGAGCAGAATAAGACTCCAAGCAAGATATCTTCAATCTTC
FD981843       --> CTGAGAAGCCGGAGCAGAATAAGACTCCAAGCAAGATATCTTCAATCTTC
FD559476       --> CTGAGAAGCCGGAGCAGAATAAGACTCCAAGCAAGATATCTTCAATCTTC
EV565562       --> CTGAGAAGCCGGAGCAGAATAAGACTCCAAGCAAGATATCTTCAATCTTC
EV565563       --> CTGAGAAGCCGGAGCAGAATAAGACTCCAAGCAAGATATCTTCAATCTTC
EY916461       --> CTGAGAAGCCGGAGCAGAATAAGACTCCAAGCAAGATACCTTCAATCTTC
EV552358       --> CTGAGAAGCCGGAGCAGAATAAGACTCCAAGCAAGATATCTTCAATCTTC
FD964978       --> .........................................gCAATCTTC

               601    -    651
UN13762        --> TGTGGAACACAAGACAAGTGTGCTGCTTGTGAGAAAACTGTTTACCCTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530010       <-- TGTGGAACACAAGACAAGTGTGCTGCTTGTGAGAAAACTGTTTACCCTCT
EV546171       <-- TGTGGAACACAAGACAAGTGTGCTGCTTGTGAGAAAACTGTTTACCCTCT
EV547288       <-- TGTGGAACACAAGACAAGTGTGCTGCTTGTGAGAAAACTGTTTACCCTCT
EW728182       <-- TGTGGAACACAAGACAAGTGTGCTGCTTGTGAGAAAACTGTTTACCCTCT
EV545649       <-- TGTGGAACACAAGACAAGTGTGCTGCTTGTGAGAAAACTGTTTACCCTCT
EV544021       <-- TGTGGAACACAAGACAAGTGTGCTGCTTGTGAGAAAACTGTTTACCCTCT
EV570847       <-- TGTGGAACACAAGACAAGTGTGCTGCTTGTGAGAAAACTGTTTACCCTCT
FD974816       <-- TGTGGAACACAAGACAAGTGTGCTGCTTGTGAGAAAACTGTTTACCCTCT
EW727805       <-- TGTGGAACACAAGACAAGTGTGCTGCTTGTGAGAAAACTGTTTACCCTCT
FD553039       <-- TGTGGAACACAAGACAAGTGTGCTGCTTGTGAGAAAACTGTTTACCCTCT
EY912139       <-- TGTGGAACACAAGACAAGTGTGCTGCTTGTGAGAAAACTGTTTACCCTCT
EY910015       <-- TGTGGAACACAAGACAAGTGTGCTGCTTGTGAGAAAACTGTTTACCCTCT
EV570846       <-- ..................................................
EX777819       <-- ..................................................
FD555175       <-- ..................................................
EX774056       --> TGTGGAACACAAGACAAGTGTGCTGCTTGTGAGAAAACTGTTTACCCTCT
FD533740       --> TGTGGAACACAAGACAAGTGTGCTGCTTGTGAGAAAACTGTTTACCCTCT
EV525202       --> TGTGGAACACAAGACAAGTGTGCTGCTTGTGAGAAAACTGTTTACCCTCT
EV548331       --> TGTGGAACACAAGACAAGTGTGCTGCTTGTGAGAAAACTGTTTACCCTCT
EV550334       --> TGTGGAACACAAGACAAGTGTGCTGCTTGTGAGAAAACTGTTTACCCTCT
EY896706       --> TGTGGAACACAAGACAAGTGTGCTGCTTGTGAGAAAACTGTTTACCCTCT
EY940855       --> TGTGGAACACAAGACAAGTGTGCTGCTTGTGAGAAAACTGTTTACCCTCT
FD569352       --> TGTGGAACACAAGACAAGTGTGCTGCTTGCGAGAAAACTGTTTACCCTCT
EV548176       --> TGTGGAACACAAGACAAGTGTGCTGCTTGTGAGAAAACTGTTTACCCTCT
EY922455       --> TGTGGAACACAAGACAAGTGTGCTGCTTGTGAGAAAACTGTTTACCCTCT
EY946378       --> TGTGGAACACAAGACAAGTGTGCTGCTTGTGAGAAAACTGTTTACCCTCT
FD542831       --> TGTGGAACACAAGACAAGTGTGCTGCTTGTGAGAAAACTGTTTACCCTCT
FD964100       --> TGTGGAACACAAGACAAGTGTGCTGCTTGTGAGAAAACTGTTTACCCTCT
FD981843       --> TGTGGAACACAAGACAAGTGTGCTGCTTGTGAGAAAACTGTTTACCCTCT
FD559476       --> TGTGGAACACAAGACAAGTGTGCTGCTTGTGAGAAAACTGTTTACCCTCT
EV565562       --> TGTGGAACACAAGACAAGTGTGCTGCTTGTGAGAAAACTGTTTACCCTCT
EV565563       --> TGTGGAACACAAGACAAGTGTGCTGCTTGTGAGAAAACTGTTTACCCTCT
EY916461       --> TGTGGAACACAAGACAAGTGTGCTGCTTGTGAGAAAACTGTTTACCCTCT
EV552358       --> TGTGGAACACAAGACAAGTGTGCTGCTTGTGAGAAAACTGTTTACCCTCT
FD964978       --> TGTGGAACACAAGACAAGTGTGCTGCTTGTGAGAAAACTGTTTACCCTCT

               651    -    701
UN13762        --> TGAAAAGGTGCAAATGGAAGGAGAATGCTTCCACAAGACATGTTTCAAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530010       <-- TGAAAAGGTGCAAATGGAAGGAGAATGCTTCCACAAGACATGTTTCAAGT
EV546171       <-- TGAAAAGGTGCAAATGGAAGGAGAATGCTTCCACAAGACATGTTTCAAGT
EV547288       <-- TGAAAAGGTGCAAATGGAAGGAGAATGCTTCCACAAGACATGTTTCAAGT
EW728182       <-- TGAAAAGGTGCAAATGGAAGGAGAATGCTTCCACAAGACATGTTACAAGT
EV545649       <-- TGAAAAGGTGCAAATGGAAGGAGAATGCTTCCACAAGACATGTTTCAAGT
EV544021       <-- TGAAAAGGTGCAAATGGAAGGAGAATGCTTCCACAAGACATGTTTCAAGT
EV570847       <-- TGAAAAGGTGCAAATGGAAGGAGAATGCTTCCACAAGACATGTTTCAAGT
FD974816       <-- TGAAAAGGTGCAAATGGAAGGAGAATGCTTCCACAAGACATGTTTCAAGT
EW727805       <-- TGAAAAGGTGCAAATGGAAGGAGAATGCTTCCACAAGACATGTTTCAAGT
FD553039       <-- TGAAAAGGTGCAAATGGAGGGAGAATGCTTCCACAAGACATGTTTCAAGT
EY912139       <-- TGAAAAGGTGCAAATGGAAGGAGAATGCTTCCACAAGACATGTTTCAAGT
EY910015       <-- TGAAAAGGTGCAAATGGAAGGAGAATGCTTCCACAAGACATGTTTCAAGT
EV570846       <-- .........................TGCTTCCACAAGACATGTTTCAAGT
EX777819       <-- ..................................................
FD555175       <-- ..................................................
EX774056       --> TGAAAAG-TGCAAATGGAAG-AG-ATGCTTCCACA...............
FD533740       --> TGAAAAGGTGCAAATGGAAGGAGAATGCTTCCACAAGACATGTTTCAAGT
EV525202       --> TGAAAAGGTGCAAATGGAAGGAGAATGCTTCCACAAGACATGTTTCAAGT
EV548331       --> TGAAAAGGTGCAAATGGAAGGAGAATGCTTCCACAAGACATGTTTCAAGT
EV550334       --> TGAAAAGGTGCAAATGGAAGGAGAATGCTTCCACAAGACATGTTTCAAGT
EY896706       --> TGAAAAGGTGCAAATGGAAGGAGAATGCTTCCACAAGACATGTTTCAAGT
EY940855       --> TGAAAAGGTGCAAATGGAAGGAGAATGCTTCCACAAGACATGTTTCAAGT
FD569352       --> TGAAAAGGTGCAAATGGAAGGAGAATGCTTCCACAAGACATGTTTCAAGT
EV548176       --> TGAAAAGGTGCAAATGGAAGGAGAATGCTTCCACAAGACATGTTTCAAGT
EY922455       --> TGAAAAGGTGCAAATG..................................
EY946378       --> TGAAAAGGTGCAAATGGAAGGAGAATGCTTCCACAAGACATGTTTCAAGT
FD542831       --> TGAAAAGGTGCAAATGGAAGGAGAATGCTTCCACAAGACATGTTTCAAGT
FD964100       --> TGAAAAGGTGCAAATGG.................................
FD981843       --> TGAAAAGGTGCAAATGGAAGGAGAATGCTTCCACAAGACATGTTTCAAGT
FD559476       --> TGAAAAGGTGCAAATGGAAGGAGAATGCTTCCACAAGACATGTTTCAAGT
EV565562       --> TGAAAAGGTGCAAATGGAAGGAGAATGCTTCCACAAGACATGTTTCAAGT
EV565563       --> TGAAAAGGTGCAAATGGAAGGAGAATGCTTCCACAAGACATGTTTCAAGT
EY916461       --> TGAAAAGGTGCAAATGGAAGGAGAATGCTTCCACAAGACATGTTTCAAGT
EV552358       --> TGAAAAGGTGCAAATGGAAGGAGAATGCTTCCACAAGACATGTTTCAAGT
FD964978       --> TGAAAAGGTGCAAATGGAAGGAGAATGCTTCCACAAGACATGTTTCAAGT

               701    -    751
UN13762        --> GCGCTCACGGTGGCTGCACGCTGACTCATTCC-TCGTACGCTTCCCTGG-
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530010       <-- GCGCTCACGGTGGCTGCACGCTGACTCATTCC-TCGTACGCTTCCCTGG-
EV546171       <-- GCGCTCACGGTGGCTGCACGCTGACTCATTCC-TCGTACGCTTCCCTGG-
EV547288       <-- GCGCTCACGGTGGCTGCACGCTGACTCATTCC-TCGTACGCTTCCCTGG-
EW728182       <-- GCGCTCACGGTGGCTGCACGCTGACTCATTCC-TCGTACGCTTCCCTGG-
EV545649       <-- GCGCTCACGGTGGCTGCACGCTGACTCATTCC-TCGTACGCTTCCCTGG-
EV544021       <-- GCGCTCACGGTGGCTGCACGCTGACTCATTCC-TCGTACGCTTCCCTGG-
EV570847       <-- GCGCTCACGGTGGCTGCACGCTGACTCATTCC-TCGTACGCTTCCCTGG-
FD974816       <-- GCGCTCACGGTGGCTGCACGCTGACTCATTCC-TCGTACGCTTCCCTGG-
EW727805       <-- GCGCTCACGGTGGCTGCACGCTGACTCATTCC-TCGTACGCTTCCCTGG-
FD553039       <-- GCGCTCACGGTGGCTGCACGCTGACTCATTCC-TCGTACGCTTCCCTGG-
EY912139       <-- GCGCTCACGGTGGCTGCACGCTGACTCATTCC-TCGTACGCTTCCCTGG-
EY910015       <-- GCGCTCACGGTGGCTGCACGCTGACTCATTCC-TCGTACGCTTCCCTGG-
EV570846       <-- GCGCTCACGGTGGCTGCACGCTGACTCATTCC-TCGTACGCTTCCCTGG-
EX777819       <-- ..................................................
FD555175       <-- ..................................................
EX774056       --> ..................................................
FD533740       --> GCGCTCACGGTGGCTGCACGCTGACTCATTCC-TCGTA............
EV525202       --> GCGCTCACGGTGGCTGCACGCTGACTCATTCC-TCGTACGCTTCCCTGGG
EV548331       --> GCGCTCACGGTGGCTGCACGCTGACTCATTCC-TCGTACGCTTCCCTGG-
EV550334       --> GCGCTCACGGTGGCTGCACGCTGACTCATTCC-TCGTACGCTTCCCTGG-
EY896706       --> GCGCTCACGGTGGCTGCACGCTGACTCATTCC-TCGTACGCTTCCCTGG-
EY940855       --> GCGCTCACGGTGGCTGCACGCTGACTCATTCC-TCGTACGCTTCCCTGG-
FD569352       --> GCGCTCACGGTGGCTGCACGCTGACTCATTCC-TCGTACGCTTCCCTGG-
EV548176       --> GCGCTCACGGTGGCTGCACGCTGACTCATTCC-TCGTACGCTTCCCTGGG
EY922455       --> ..................................................
EY946378       --> GCGCTCACGGTGGCTGCACGCTGACTCATTCC-TCGTACGCTTCCCTGG-
FD542831       --> GCGCTCACGGTGGCTGCACGCTGACTCATTCC-TCGTACGCTTCCCTGG-
FD964100       --> ..................................................
FD981843       --> GCGCTCACGGTGGCTGCACGCTGACTCATTCC-TCGTACGCTTCCCTGG-
FD559476       --> GCGCTCACGGTGGCTGCACGCTGACTCATTCC-TCGTACGCTTCCCTGG-
EV565562       --> GCGCTCACGGTGGCTGCACGCTGACTCATTCC-TCGTACGCTTCCCTGGG
EV565563       --> GCGCTCACGGTGGCTGCACGCTGACTCATTCCCTCGTACGCTTCCCTGG-
EY916461       --> GCGCTCACGGTGGCTGCACGCTGACTCATTCC-TCGTACGCTTCCCTGG-
EV552358       --> GCGCTCACGGTGGCTGCACGCTGACTCATTCC-TCGTACGCTTCCCTGG-
FD964978       --> GCGCTCACGGTGGCTGCACGCTGACTCATTCC-TCGTACGCTTCCCTGG-

               751    -    801
UN13762        --> ATGGCGTTCTCTATT-GCCGGCATCACTTTAACCAACTCTTCCTCGAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530010       <-- ATGGCGTTCTCTATT-GCCGGCATCACTTTAACCAACTCTTCCTCGAGAA
EV546171       <-- ATGGCGTTCTCTACT-GCCGGCATCACTTTAACCAACTCTTCCTCGAGAA
EV547288       <-- ATGGCGTTCTCTATT-GCCGGCATCACTTTAACCAACTCTTCCTCGAGAA
EW728182       <-- ATGGCGTTCTCTATT-GCCGGCATCACTTTAACCAACTCTTCCTCGAGAA
EV545649       <-- ATGGCGTTCTCTATT-GCCGGCATCACTTTAACCAACTCTTCCTCGAGAA
EV544021       <-- ATGGCGTTCTCTATT-GCCGGCATCACTTTAACCAACTCTTCCTCGAGAA
EV570847       <-- ATGGCGTTCTTTATT-GCCGGCATCACTTTAACCAACTTTTCCTCGAGAA
FD974816       <-- ATGGCGTTCTCTACT-GCCGGCATCACTTTAACCAACTCTTCCTCGAAAA
EW727805       <-- ATGGCGTTCTCTATT-GCCGGCATCACTTTAACCAACTCTTCCTCGAGAA
FD553039       <-- ATGGCGTTCTTTATT-GCCGGCATCACTTTAACCAACTTTTCCTCGAGAA
EY912139       <-- ATGGCGTTCTCTATT-GCCGGCATCACTTTAAC-AACTCTTCCTCGAGAA
EY910015       <-- ATGGCGTTCTCTACT-GCCGGCATCACTTTAACCAACTCTTCCTCGAGAA
EV570846       <-- ATGGCGTTTTTTATT-GCCGGCATCACTTTAACCAACTTTTCCTCG....
EX777819       <-- ............ATT-GCCGGCATCACTTTAACCAACTTTTCCTCGAGAA
FD555175       <-- ........................................TCCTCGAGAA
EX774056       --> ..................................................
FD533740       --> ..................................................
EV525202       --> ATGGCGTTCTCTATT-GCCGGCATCACTTTAACCAACTCTTCCTCGAGAA
EV548331       --> ATGGCGTTCTCTATT-GCCGGCATCACTTTAACCAACTCTTCCTCGAGAA
EV550334       --> ATGGCGTTCTCTATT-GCCGGCATCACTTTAACCAACTCTTCCTCGAGAA
EY896706       --> ATGGCGTTCTCTATT-GCCGGCATCAC.......................
EY940855       --> ATGG..............................................
FD569352       --> ATGGCGTTCTCTATT-GCCGGCATCACTTTAACCAACTCTTCCTCGAGAA
EV548176       --> ATGGCGTTCTCTATT-GCCGGCATCACTTTAACCAACTCTTCCTCGAGAA
EY922455       --> ..................................................
EY946378       --> ATGGCGTTCTCTATT-GCCGGCATCACTTTAACCAACTCTTCCTCGAGAA
FD542831       --> ATGGCGTTCTCTATT-GCCGGCATCACTTTAACCAACTCTTCCTCGAGAA
FD964100       --> ..................................................
FD981843       --> ATGGCGTTCTCTATT-GCCGGCATCACTTTAACCAACTCTTCCTCGAGAA
FD559476       --> ATGGCGTTCTCTATT-GCCGGCATCACTTTAACCAACTCTTCCTCGAGAA
EV565562       --> ATGGCGTTCTCTATTTGCCGGCATCACTTTAACCAACTTTTCCTCGAGAA
EV565563       --> ATGGCGTTCTCTATT-GCCGGCATCACTTTAACCAACTTTTCCTCGAGAA
EY916461       --> ATGGCGTTCTCTATT-GCCGGCATCACTTTTAACAACTCTTCCT......
EV552358       --> ATGGCGTTCTCTATT-GCCGGCATCACTTTAACCAACTCTTCCTCGAGAA
FD964978       --> ATGGCGTTCTCTATT-GCCGGCATCACTTTAACCAACTCTTCCTCGAGAA

               801    -    851
UN13762        --> AGGCAACTACGCTCACGTTCTCCAAGCAGCCAACCACCGTCGCACGGCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530010       <-- AGGCAACTACGCTCACGTTCTCCAAGCAGCCAACCACCGTCGCACGGCCT
EV546171       <-- AGGCAACTACGCTCACGTTCTCCAAGCAGCCAACCACCGTCGCACGGCCT
EV547288       <-- AGGCAACTACGCTCACGTTCTCCAAGCAGCCAACCACCGTCGCACGGCCT
EW728182       <-- AGGCAACTACGCTCACGTTCTCCAAGCAGCCAACCACCGTCGCACGGCCT
EV545649       <-- AGGCAACTACGCTCACGTTTTCCAAGCAGCCAACCACCGTCGCACGGCCT
EV544021       <-- AGGCAACTACGCTCACGTTTTCCAAGCAGCCAACCACCGTCGCGCGGCCT
EV570847       <-- AGGCAACTACGCTCACGTTTTCCAAGCAGCCAACCACCGTCGCACGGCCT
FD974816       <-- AGGCAACTACGCTCACGTTCTCCAAGCAGCCAACCACCGTCGCACGGCCT
EW727805       <-- AGGCAACTACGCTCACGTTCTCCAAGCAGCCAACCACCGTCGCACGGCCT
FD553039       <-- AGGCAACTACGCTCACGTTTTCCAAGCAGCCAACCACCGTCGCACGGCCT
EY912139       <-- AGGCAACTACGCTCACGTTCTCCAAGCAGCCAACCACCGTCGCACGGCCT
EY910015       <-- AGGCAACTACGCTCACGTTCTCCAAGCAGCCAACCACCGTCGCACAGCCT
EV570846       <-- ..................................................
EX777819       <-- AGGCAACTACGCTCACGTTTTCCAAGCAGCCAACCACCGTCGCACGGCCT
FD555175       <-- AGGCAACTACGCTCACGTTCTCCAAGCAGCCAACCACCGTCGCACGGCCT
EX774056       --> ..................................................
FD533740       --> ..................................................
EV525202       --> AGGCAACTACGCTCACGTTCTCCAAGCAGCCAACCACCGTCGCACGGCCT
EV548331       --> AGGCAACTACGCTCACGTTCTCCAAGCAGCCAACCACCGTCGCGCGGCCT
EV550334       --> AGGCAACTACGCTCACGTTCTCCAAGCAGCCAACCACCGTCGCACGGCCT
EY896706       --> ..................................................
EY940855       --> ..................................................
FD569352       --> AG-C-ACTACGCTCACGTTCTCCAAGCAGCCAAC-ACCGTCGCACGGCCT
EV548176       --> AGGCAACTACGCTCACGTTCTCCAAGCAGCCAACCACCGTCGCACGGCCT
EY922455       --> ..................................................
EY946378       --> AG-CAACTACGCTCATGTTCTCCAAGCAGCCAACCACCGTCGCACGGCCT
FD542831       --> AGGCAACTACGCTCACGTTCTCCAAGCAGCCAACCACCGTCGCACGGCCT
FD964100       --> ..................................................
FD981843       --> AGGCAACTACGCTCACGTTCTCCAAGCAGCCAACCACCGTCGCACGGCCT
FD559476       --> AGGCAACTACGCTCACGTTCTCCAAGCAGCCAACCACCGTCGCACGGCCT
EV565562       --> AGGCAACTACGCTCACGTTCTCCAAGCAGCCAACCACCGTCGCACGGCCT
EV565563       --> AGGCAACTACGCTCACGTTCTCCAAGCAGCCAACCACCGTCGCACGGCCT
EY916461       --> ..................................................
EV552358       --> AGGCAACTACGCTCACGTTCTCCAAGCAGCCAACCACCGTCGCACGGCCT
FD964978       --> AGGCAACTACGCTCACGTTCTCCAAGCAGCCAACCACCGTCGCACGGCCT

               851    -    901
UN13762        --> CAGGCAACACTCTTCCTCCGGAGACCACTGAAGAGGTAGCCGTCGAAGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530010       <-- CAGGCAACACTCTTCCTCCGGAGACCACTGAAGAGGTAGCCGTCGAAGCC  Raphanus raphanistrum subsp. maritimus
EV546171       <-- CAGGCAACACTCTTCCTCCGGAGACCACTGAAGAGGTAGCCGTCGAAGCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV547288       <-- CAGGCAACACTCTTCCTCCGGAGACCACTGAAGAGGTAGCCGTCGAAGCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW728182       <-- CAGGCAACACTCTTCCTCCGGAGATCACTGAAGAGGTAGCCGTCGAAGCC  Raphanus sativus cv Early Scarlet Globe
EV545649       <-- CAGGCAACACTCTTCCTCCGGAGACCACTGAAGAGGTAGCCGTCGAAGCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV544021       <-- CAGGCAACACTCTTCCTCCGGAGACCACTGAAGAGGTAGCCGTCGAAGCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV570847       <-- CAGGCAACACTCTTCCTCCGGAGATCACTGAAGAGGTAGCCGTCGAAGCC  Raphanus raphanistrum subsp. landra
FD974816       <-- CAGGCAACACTCTTCCTCCGGAGACCACTGAAGAGGTAGCCGTCGAAGCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW727805       <-- CAGGCAACACTCTTCCTCCGGAGATCACTGAAGAGGTAGCCGTCGAAGCC  Raphanus sativus cv Early Scarlet Globe
FD553039       <-- CAGGCAACACTCTTCCTCCGGAGATCACTGAAGAGGTAGCCGTCGAAGCC  Raphanus raphanistrum subsp. landra
EY912139       <-- CAGGCAACACTCTTCCTCCGGAGATCACTGAAGAGGTAGCCGTCGAAGCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY910015       <-- CAGGCAACACTCTTCCTCCGGAGACCACTGAAGAGGTAGCCGTCGAAGCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV570846       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX777819       <-- CAGGCAACACTCTTCCTCCGGAGATCACTGAAGAGGTAGCCGTCGAAGCC  Raphanus raphanistrum subsp. landra
FD555175       <-- CAGGCAACACTCTTCCTCCGGAGATCACTGAAGAGGTAGCCGTCGAAGCC  Raphanus raphanistrum subsp. landra
EX774056       --> ..................................................  Raphanus raphanistrum subsp. landra
FD533740       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV525202       --> CAG-CAACACTCTTCCTCCGGAGACCACTGA-GAGGTAGCCGTCGA-GCC  Raphanus raphanistrum subsp. maritimus
EV548331       --> CAG-CAACACTCTTCCTCCGGAGACCACTGA...................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV550334       --> CACGCAACACTCTTCCTCCGGAGACCACTGAAGAGGTAGCCGTCGAAGCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY896706       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY940855       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD569352       --> CAG-CGACACTCTTCCTCCG-AGACCACTGAAGAG-TAGCCGTCGA-GCC  Raphanus sativus cv Early Scarlet Globe
EV548176       --> CAGGCAACACTCTTCCTCCGGAGACCACTGAAGAGGTAGCCGTCGAAGCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY922455       --> ..................................................  Raphanus raphanistrum subsp. landra
EY946378       --> CAG-CAACACTCTT....................................  Raphanus sativus cv Rat-Tail Radish #3870
FD542831       --> C.................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD964100       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD981843       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD559476       --> CACGCAACACTCTTCCTCCGGAGATCACTGAAGAG-TAGCCGTCGAAGCC  Raphanus raphanistrum subsp. landra
EV565562       --> CAGGCAACACTCTTCCTCCGGAGATCACTGAAGAGGTAGCCGTCGAAGCC  Raphanus raphanistrum subsp. landra
EV565563       --> CAGGCAACACTCTTCCTCCGGAGATCACTGAAGAGGTAGCCGTCGAAGCC  Raphanus raphanistrum subsp. landra
EY916461       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV552358       --> CAGGCAACACTCTTCCTCCGGAGACCACTGAAGAGGTAGCCGTCGAAGCC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD964978       --> CAGGCAACACTCTTCCTCCGGAGACCACTGAAGAGGTAGCCGTCGAAGCC  Raphanus raphanistrum subsp. maritimus

               901    -    951
UN13762        --> AAAGAAGAGAACGACGTTTCAGAGTCTTGAAAA-CAA-AAA-CATCTTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530010       <-- AAAGAAGAGAACGACGTTTCAGAGTCTTGAAAA-CAA-AAA-TATCTTCC  Raphanus raphanistrum subsp. maritimus
EV546171       <-- AAAGAAGAGAACGACGTTTCAGAGTCTTGAAAA-CAA-AAA-TATCTTCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV547288       <-- AAAGAAGAGAACGACGTTTCAGAGTCTTGAAAA-CAA-AAA-CATCTTCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW728182       <-- AAAGAAGAGAACGACGTTTCAGAGTCTTGAAAA-CAA-AAAACATCTTCC  Raphanus sativus cv Early Scarlet Globe
EV545649       <-- AAAGAAGAGAACGACGTTTCAGAGTCTTGAAAA-CAA-AAA-CATCTTCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV544021       <-- AAAGAAGAGAACGACGTTTCAGAGTCTTGAAAA-CAA-AAA-CATCTTCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV570847       <-- AAAGAAGAGAACGACGTTTCAGAGTCTTGAAAA-CAA-AAAACATCTTCC  Raphanus raphanistrum subsp. landra
FD974816       <-- AAAGAAGAGAACGACGTTTCAGAGTCTTGAAAA-CAA-AAA-TATCTTCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW727805       <-- AAAGAAGAGAATGACGTTTCAGAGTCTTGAAAA-C...............  Raphanus sativus cv Early Scarlet Globe
FD553039       <-- AAAGAAGAGAACGACGTTTCAGAGTCTTGAAAA-CAAGAAA-CATCTTCC  Raphanus raphanistrum subsp. landra
EY912139       <-- AAAGAAGAGAACGACGTTTCAGAGTCTTGAAAAACAA-AAA-CATCTTCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY910015       <-- AAAGAAGAGAACGACGTTTCAGAGTCTTGAAAA-CAA-AAA-TATCTTCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV570846       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX777819       <-- AAAGAAGAGAACGACGTTTCAGAGTCTTGAAAA-CAA-AAAACATCTTCC  Raphanus raphanistrum subsp. landra
FD555175       <-- AAAGAAGAGAACGACGTTTCAGAGTCTTGAAAA-CAA-AAAACATCTTCC  Raphanus raphanistrum subsp. landra
EX774056       --> ..................................................  Raphanus raphanistrum subsp. landra
FD533740       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV525202       --> AAAGA-GAGAACGACGTTTCAGAGTCTTGAAA--CAA-AAta........  Raphanus raphanistrum subsp. maritimus
EV548331       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV550334       --> AAAGAAGAGAACGACGTTTCAGAGTCTTGAAA--CAA-AA--CATCTTCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY896706       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY940855       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD569352       --> AA-GAAGAGA-CGACGTTTCAGAGTCTTGAtacaaaat............  Raphanus sativus cv Early Scarlet Globe
EV548176       --> AAAGA-GAGAACGACGTTTCAGAGTCTTGAAAA-CAA-AA--CATCTTCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY922455       --> ..................................................  Raphanus raphanistrum subsp. landra
EY946378       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD542831       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD964100       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD981843       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD559476       --> AAA...............................................  Raphanus raphanistrum subsp. landra
EV565562       --> AAAGAAGAGAACGACGTTTCAGAGTCTTGA....................  Raphanus raphanistrum subsp. landra
EV565563       --> AAAGAAGAGAACGACGTTTCAGAGTCTTGAAAA-CAA-AAAACATCTTCC  Raphanus raphanistrum subsp. landra
EY916461       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV552358       --> AAAGAAGAGAACGACGTTTCAGAGTCTTGAAAA-CAA-AAA-CATCTTCC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD964978       --> AAATAAGAGAACGACGTTTCAGAGTCTTGAAAA-CAA-AAA-TATCTTCC  Raphanus raphanistrum subsp. maritimus

               951    -   1001
UN13762        --> GTTGATCAGTTTGTGAGTGATTTGAATTCAATGTTGCGACCAAAGATTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530010       <-- GTTGATCAGTTTGTGAGTGATTTGAATTCAATGTTGCGACCAAAGATTTG  Raphanus raphanistrum subsp. maritimus
EV546171       <-- GTTGATCAGTTTGTGAGTGATTTGAATTCAATGTTGCGACCAAAGATTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV547288       <-- GTTGATCAGTTTGTGAGTGATTTGAATTCAATGTTGCGACCAAAGAATTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW728182       <-- GGTGATCAGTTTGTGAGTGATTTGAATTCAATGTTGCGACCAAAGATTTG  Raphanus sativus cv Early Scarlet Globe
EV545649       <-- GTTGATCAGTTTGTGAGTGATTTGAATTCAATGTTGCGACCAAAGATTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV544021       <-- GTTGATCAGTTTGTGAGTGATTTGAATTCAATGTTGCGACCAAAGATTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV570847       <-- GGTGATCAGTTTGTGAGTGATTTGAATTCAATGTTGCGACCAAAGATTTG  Raphanus raphanistrum subsp. landra
FD974816       <-- GTTGATCAGTTTGTGAGTGATTTGAATTCAATGTTGCGACCAAAGATTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW727805       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD553039       <-- GGTGATCAGTTTGTGAGTGATTTGAATTCAATGTTGCGACCAAAGATTTG  Raphanus raphanistrum subsp. landra
EY912139       <-- GGTGATCAGTTTGTGAGTGATTTGAATTCAATGTTGCGACCAAAGATTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY910015       <-- GGTGATCAGTTTGTGAGTGATTTGAATTCAATGTTGCGACCAAAGATTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV570846       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX777819       <-- GGTGATCAGTTTGTGAGTGATTTGAATTCAATGTTGCGACCAAAGATTTG  Raphanus raphanistrum subsp. landra
FD555175       <-- GGTGATCAGTTTGTGAGTGATTTGAATTCAATGTTGCGACCAAAGATTTG  Raphanus raphanistrum subsp. landra
EX774056       --> ..................................................  Raphanus raphanistrum subsp. landra
FD533740       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV525202       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV548331       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV550334       --> GTTGATCAGTTTGTGAGTGATTTGAttcatgtgcg...............  Raphanus raphanistrum subsp. raphanistrum (NY)
EY896706       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY940855       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD569352       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EV548176       --> GT-GATCAGTTTGTGAGTGATTTGAATTCA-TGTTGCGACCAAAGATTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY922455       --> ..................................................  Raphanus raphanistrum subsp. landra
EY946378       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD542831       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD964100       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD981843       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD559476       --> ..................................................  Raphanus raphanistrum subsp. landra
EV565562       --> ..................................................  Raphanus raphanistrum subsp. landra
EV565563       --> GGTGATCAGTTTGTGAGTGATTTGAATTCAATGTTGCGACCAAAGATTTG  Raphanus raphanistrum subsp. landra
EY916461       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV552358       --> GTTGATCAGTTTGTGAGTGATTTGAATTCAATGTTGCGACCAAAGAATTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD964978       --> GTTGATCAGTTTGTGAGTGATTTGAATTCAATGTTGCGACCAAAGATTTG  Raphanus raphanistrum subsp. maritimus

               1001   -   1051
UN13762        --> ATTTAATTTGTAATGAGTTATTGTTTCCATATGGAC--ACATTATTTAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530010       <-- ATTTAATTTGTAATGAGTTATTGTTTCCATATGGAC--A...........  Raphanus raphanistrum subsp. maritimus
EV546171       <-- ATTTAATTTGTAATGAGTAATTGTTTCCATATATATGGACATTATTTAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV547288       <-- ATTTAATTTGTAATGAGTTATTGTTTCCATATGAAG--ACATTATTTAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW728182       <-- ATTTAATTTGTAATGAGTTATTGTTTCCATATGGAC--A...........  Raphanus sativus cv Early Scarlet Globe
EV545649       <-- ATTTAATTTGTAATGAGTTATTGTTTCCATATGaagac............  Raphanus raphanistrum subsp. raphanistrum (NY)
EV544021       <-- ATTTAATTTGTAATGAGTTATTGTTTCCATATGAAG--ACATTATTTAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV570847       <-- ATTTAATTTGTAATGAGTTATTGTTTCCATATGGAC--A...........  Raphanus raphanistrum subsp. landra
FD974816       <-- ATTTAATTTGTAATGAGTAATTGTTTCCATATatatggaca.........  Raphanus raphanistrum subsp. raphanistrum (NY)
EW727805       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD553039       <-- ATTTAATTTGTAATGAGTTATTGTTTCCATATGGAC----ATTATTTAAT  Raphanus raphanistrum subsp. landra
EY912139       <-- ATTTAATTTGTAATGAGTTATTGTTTCCATATGAAG--ACATTATTT...  Raphanus raphanistrum subsp. raphanistrum (NY)
EY910015       <-- ATTTAATTTGTAATGAGTTATTGTTTCCATATGAAG--ACATTATTTAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV570846       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX777819       <-- ATTTAATTTGTAATGAGTTATTGTTTCCATATGGAC--A...........  Raphanus raphanistrum subsp. landra
FD555175       <-- ATTTAATTTGTAATGAGTTATTGTTTCCATATGGAC--A...........  Raphanus raphanistrum subsp. landra
EX774056       --> ..................................................  Raphanus raphanistrum subsp. landra
FD533740       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV525202       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV548331       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV550334       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY896706       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY940855       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD569352       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EV548176       --> ATTTA-TTTGTA-TGAGTatgtttcatatg....................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY922455       --> ..................................................  Raphanus raphanistrum subsp. landra
EY946378       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD542831       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD964100       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD981843       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD559476       --> ..................................................  Raphanus raphanistrum subsp. landra
EV565562       --> ..................................................  Raphanus raphanistrum subsp. landra
EV565563       --> ATTTAATTTGTAATGAGTTATTGTTTCCATATGGAC--A...........  Raphanus raphanistrum subsp. landra
EY916461       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV552358       --> ATTTAATTTGTAATGAGTTATTGTTTCCATATG-AG--ACATTATTTAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD964978       --> ATTTAATTTGTAATGAGTTATTGTTTCCATATGGAC--A...........  Raphanus raphanistrum subsp. maritimus

               1051   -   1101
UN13762        --> A-TTTTGTTTTCGTTATTTATACATAATTTACACGGCAAAGAAAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530010       <-- ..............................................
EV546171       <-- A-TTTTGTTTTCGTTATTTATACAT.....................
EV547288       <-- ACTTTTGTTTTCGTTATTT...........................
EW728182       <-- ..............................................
EV545649       <-- ..............................................
EV544021       <-- ACTTTTGTTTTCGTTATTTATACATAATTTACACGGCAAAGAAAGC
EV570847       <-- ..............................................
FD974816       <-- ..............................................
EW727805       <-- ..............................................
FD553039       <-- A-TTTTGTTTTCGTTATTTATACATAATTCACACagcca.......
EY912139       <-- ..............................................
EY910015       <-- A-TTTTGTTTTCGTTATTTATACATAATTTACACagc.........
EV570846       <-- ..............................................
EX777819       <-- ..............................................
FD555175       <-- ..............................................
EX774056       --> ..............................................
FD533740       --> ..............................................
EV525202       --> ..............................................
EV548331       --> ..............................................
EV550334       --> ..............................................
EY896706       --> ..............................................
EY940855       --> ..............................................
FD569352       --> ..............................................
EV548176       --> ..............................................
EY922455       --> ..............................................
EY946378       --> ..............................................
FD542831       --> ..............................................
FD964100       --> ..............................................
FD981843       --> ..............................................
FD559476       --> ..............................................
EV565562       --> ..............................................
EV565563       --> ..............................................
EY916461       --> ..............................................
EV552358       --> A-CTTTGTTTTCGTattt............................
FD964978       --> ..............................................