Library    |     Search    |     Batch query    |     SNP    |     SSR  

Alignment for radish unigene UN13784

               1      -     51
UN13784        --> GGAACTCATAAGCCTTCTCTCCTCTCTCCTAAAAGACCAAACAAAACCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570982       <-- ..................................................
EY911694       <-- ..................................................
EX766241       <-- ..................................................
FD567147       <-- ..................................................
EV570981       <-- ..................................................
FD960559       <-- ..................................................
EV573183       <-- ..................................................
EW721596       <-- ..................................................
EY915937       --> GGAACTCATAAGCCTTCTCTCCTCTCTCCTAAAAGACCAAACAAAACCAC
EV565701       --> ..................................................
FD549717       --> ..................................................
EX761852       --> ..................................................
EV549894       --> ..................................................
FD964600       --> ..................................................
FD563533       --> ..................................................
EV568461       --> ..................................................
EW718004       --> ..................................................

               51     -    101
UN13784        --> TGTTCTGATCTCGGATCTTTCCGTAATCTAGGGTTTCAGATCTTACTTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570982       <-- ..................................................
EY911694       <-- ..................................................
EX766241       <-- ..................................................
FD567147       <-- ..................................................
EV570981       <-- ..................................................
FD960559       <-- ..................................................
EV573183       <-- ..................................................
EW721596       <-- ..................................................
EY915937       --> TGTTCTGATCTCGGATCTTTCCGTAATCTAGGGTTTCAGATCTTACTTCA
EV565701       --> ..................................................
FD549717       --> ..................................................
EX761852       --> ..................................................
EV549894       --> ..................................................
FD964600       --> ..................................................
FD563533       --> ..................................................
EV568461       --> ..................................................
EW718004       --> ..................................................

               101    -    151
UN13784        --> AACCATGAATCAGGAGAAGCTAGGGTTTTTCAGTGTCTCGTTTCTTCTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570982       <-- ..................................................
EY911694       <-- ..................................................
EX766241       <-- ..................................................
FD567147       <-- ..................................................
EV570981       <-- ..................................................
FD960559       <-- ..................................................
EV573183       <-- ..................................................
EW721596       <-- ..................................................
EY915937       --> AACCATGAATCAGGAGAAGCTAGGGTTTTTCAGTGTCTCGTTTCTTCTGA
EV565701       --> ..................................................
FD549717       --> ..................................................
EX761852       --> ..................................................
EV549894       --> ..................................................
FD964600       --> ..................................................
FD563533       --> ..................................................
EV568461       --> ..................................................
EW718004       --> ..................................................

               151    -    201
UN13784        --> TCTTGAGTCTAGCCCTCGGTAGATTCGTCGTGGAGAAGAACAACCTCAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570982       <-- ..................................................
EY911694       <-- ..................................................
EX766241       <-- ..................................................
FD567147       <-- ..................................................
EV570981       <-- ..................................................
FD960559       <-- ..................................................
EV573183       <-- ..................................................
EW721596       <-- ..................................................
EY915937       --> TCTTGAGTCTAGCCCTCGGTAGATTCGTCGTGGAGAAGAACAACCTCAAA
EV565701       --> ..................................................
FD549717       --> ..................................................
EX761852       --> ..................................................
EV549894       --> ..................................................
FD964600       --> ..................................................
FD563533       --> ..................................................
EV568461       --> ..................................................
EW718004       --> ..................................................

               201    -    251
UN13784        --> GTCACGTCGCCAGATTCGATCAAGGGTATCTACGAATGTGCCATCGGGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570982       <-- ..................................................
EY911694       <-- ..................................................
EX766241       <-- ..................................................
FD567147       <-- ..................................................
EV570981       <-- ..................................................
FD960559       <-- ..................................................
EV573183       <-- ..................................................
EW721596       <-- ..................................................
EY915937       --> GTCACGTCGCCAGATTCGATCAAGGGTATCTACGAATGTGCCATCGGGAA
EV565701       --> ..................................................
FD549717       --> ..................................................
EX761852       --> ..................................................
EV549894       --> ..................................................
FD964600       --> ..................................................
FD563533       --> ..................................................
EV568461       --> ..................................................
EW718004       --> ..................................................

               251    -    301
UN13784        --> CTTCGGAGTTCCTCAGTACGGCGGCACACTGGTGGGAACCGTCGTGTATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570982       <-- ..................................................
EY911694       <-- ..................................................
EX766241       <-- ..................................................
FD567147       <-- ..................................................
EV570981       <-- ..................................................
FD960559       <-- ..................................................
EV573183       <-- ..................................................
EW721596       <-- ..................................................
EY915937       --> CTTCGGAGTTCCTCAGTACGGCGGCACACTGGTGGGAACCGTCGTGTATC
EV565701       --> ..................................................
FD549717       --> ..................................................
EX761852       --> ..................................................
EV549894       --> ..................................................
FD964600       --> ..................................................
FD563533       --> ..................................................
EV568461       --> ..................................................
EW718004       --> ..................................................

               301    -    351
UN13784        --> CCAAATCGAATCAGAAGGCTTGTAAAAGCTTCAGCGATTTCGACATATCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570982       <-- ..................................................
EY911694       <-- ..................................................
EX766241       <-- ..................................................
FD567147       <-- ..................................................
EV570981       <-- ..................................................
FD960559       <-- ..................................................
EV573183       <-- ..................................................
EW721596       <-- ..................................................
EY915937       --> CCAAATCGAATCAGAAGGCTTGTAAAAGCTTCAGCGATTTCGACATATCC
EV565701       --> ..................................................
FD549717       --> ..................................................
EX761852       --> ..................................................
EV549894       --> ..................................................
FD964600       --> ..................................................
FD563533       --> ..................................................
EV568461       --> ..................................................
EW718004       --> ..................................................

               351    -    401
UN13784        --> TTCAAGTCGAAGGCTGGTCGCTTACCCACTTTTGTTCTCATCGATCGTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570982       <-- ..................................................
EY911694       <-- ..................................................
EX766241       <-- ..................................................
FD567147       <-- ..................................................
EV570981       <-- ..................................................
FD960559       <-- ..................................................
EV573183       <-- ..................................................
EW721596       <-- ..................................................
EY915937       --> TTCAAGTCGAAGGCTGGTCGCTTACCCACTTTTGTTCTCATCGATCGTGG
EV565701       --> ..................................................
FD549717       --> ..................................................
EX761852       --> ..................................................
EV549894       --> ..................................................
FD964600       --> ..................................................
FD563533       --> ..................................................
EV568461       --> ..................................................
EW718004       --> ..................................................

               401    -    451
UN13784        --> AGACTGTTTCTTCACTTTGAAAGCATGGATAGCTCAACAAGCTGGAGCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570982       <-- ..................................................
EY911694       <-- ..................................................
EX766241       <-- ..................................................
FD567147       <-- ..................................................
EV570981       <-- ..................................................
FD960559       <-- ..................................................
EV573183       <-- ..................................................
EW721596       <-- ..................................................
EY915937       --> AGACTGTTTCTTCACTTTGAAAGCATGGATAGCTCAACAAGCTGGAGCAG
EV565701       --> ..................................................
FD549717       --> ..................................................
EX761852       --> ..................................................
EV549894       --> ..................................................
FD964600       --> ..................................................
FD563533       --> ..................................................
EV568461       --> ..................................................
EW718004       --> ..................................................

               451    -    501
UN13784        --> CAGCGATTCTTGTAGCCGACAACAAAGCCGAGCCATTGATTACAATGGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570982       <-- ..................................................
EY911694       <-- ..................................................
EX766241       <-- ..................................................
FD567147       <-- ..................................................
EV570981       <-- ..................................................
FD960559       <-- ..................................................
EV573183       <-- ..................................................
EW721596       <-- ..................................................
EY915937       --> CAGCGATTCTTGTAGCCGACAACAAAGCCGAGCCATTGATTACAATGGAC
EV565701       --> ..................................................
FD549717       --> ..................................................
EX761852       --> ..................................................
EV549894       --> ..................................................
FD964600       --> ..................................................
FD563533       --> ..................................................
EV568461       --> ..................................................
EW718004       --> ..................................................

               501    -    551
UN13784        --> ACACCTGAAGAAGACAAATCCGATGCAGATTATCTCCAAAACATCACCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570982       <-- ..................................................
EY911694       <-- ..................................................
EX766241       <-- ..................................................
FD567147       <-- ..................................................
EV570981       <-- ..................................................
FD960559       <-- ..................................................
EV573183       <-- ..................................................
EW721596       <-- ..................................................
EY915937       --> ACACCTGAAGAAGACAAATCCGATGCAGATTATCTCCAAAACATCACCAT
EV565701       --> ..................................................
FD549717       --> ..................................................
EX761852       --> ..................................................
EV549894       --> ..................................................
FD964600       --> ..................................................
FD563533       --> ..................................................
EV568461       --> ..................................................
EW718004       --> ..................................................

               551    -    601
UN13784        --> TCCATCTGCTCTCATCACCAAGTCCTTGGGAGACAGTTTAAAGTCTGCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570982       <-- ..................................................
EY911694       <-- ..................................................
EX766241       <-- ..................................................
FD567147       <-- ..................................................
EV570981       <-- ..................................................
FD960559       <-- ..................................................
EV573183       <-- ..................................................
EW721596       <-- ..................................................
EY915937       --> TCCATCTGCTCTCATCACCAAGTCCTTGGGAGACAGTTTAAAGTCTGCTC
EV565701       --> ..........................gGGGAGACAGTTTAAAGTCTGCCC
FD549717       --> ..................................................
EX761852       --> ..................................................
EV549894       --> ..................................................
FD964600       --> ..................................................
FD563533       --> ..................................................
EV568461       --> ..................................................
EW718004       --> ..................................................

               601    -    651
UN13784        --> TCTCCGGTGGCGACATGGTGAACATGAAGCTGGACTGGACCGAGTCTGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570982       <-- ..................................................
EY911694       <-- ..................................................
EX766241       <-- ..................................................
FD567147       <-- ..................................................
EV570981       <-- ..................................................
FD960559       <-- ..................................................
EV573183       <-- ..................................................
EW721596       <-- ..................................................
EY915937       --> TCTCCGGTGGCGACATGGTGAACATGAAGCTGGACTGGACCGAGTCTGTT
EV565701       --> TATCCGGTGGCGACATGGTGAACATGAAGCTGGACTGGACCGAGTCTGTT
FD549717       --> ..................................................
EX761852       --> ..................................................
EV549894       --> ..................................................
FD964600       --> ..................................................
FD563533       --> ..................................................
EV568461       --> ..................................................
EW718004       --> ..................................................

               651    -    701
UN13784        --> CCGCACCCTGATGAGCGTGTGGAATACGAGCTCTGGACTAACAGCAACGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570982       <-- ..................................................
EY911694       <-- ..................................................
EX766241       <-- ..................................................
FD567147       <-- ..................................................
EV570981       <-- ..................................................
FD960559       <-- ..................................................
EV573183       <-- ..................................................
EW721596       <-- ..................................................
EY915937       --> CCGCACCCTGACGAGCGTGTGGAATACGAGCTCTGGACTAACAGCAACGA
EV565701       --> CCGCACCCTGATGAGCGCGTGGAATACGAGCTCTGGACTAACAGCAACGA
FD549717       --> .........GATGAGCGTGTGGAATACGAGCTCTGGACTAACAGCAACGA
EX761852       --> ..................................................
EV549894       --> ..................................................
FD964600       --> ..................................................
FD563533       --> ..................................................
EV568461       --> ..................................................
EW718004       --> ..................................................

               701    -    751
UN13784        --> CCAGTGTGGGAAGAAGTGTGACACTCAGATCGAGTTTCTCAAGAACTTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570982       <-- ..................................................
EY911694       <-- ..................................................
EX766241       <-- ..................................................
FD567147       <-- ..................................................
EV570981       <-- ..................................................
FD960559       <-- ..................................................
EV573183       <-- ..................................................
EW721596       <-- ..................................................
EY915937       --> CCAGTGTGGGAAGAAGTGTGACACTCAGATCGAGTTTCTCAAGAACTT..
EV565701       --> CCAGTGTGGGAAGAAGTGTGACACTCAGATCGAGTTTCTCAAGAACTTCA
FD549717       --> CCAGTGTGGGAAGAAGTGTGACACTCAGATTGAGTTTCTCAAGAACTTCA
EX761852       --> ..................................................
EV549894       --> ..................................................
FD964600       --> ..................................................
FD563533       --> ..................................................
EV568461       --> ..................................................
EW718004       --> ..................................................

               751    -    801
UN13784        --> AAGGAGCTGCTCAGATTCTTGAGAAAGGAGGGCATACTCAGTTCACTCCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570982       <-- ..................................................
EY911694       <-- ..................................................
EX766241       <-- ..................................................
FD567147       <-- ..................................................
EV570981       <-- ..................................................
FD960559       <-- ..................................................
EV573183       <-- ..................................................
EW721596       <-- ..................................................
EY915937       --> ..................................................
EV565701       --> AAGGAGCTGCTCAGATTCTCGAGAAAGGAGGGCATACACAGTTCACTCCG
FD549717       --> AAGGAGCTGCTCAGATTCTTGAGAAAGGAGGGCATACTCAGTTCACTCCA
EX761852       --> ..................................................
EV549894       --> ..................................................
FD964600       --> ..................................................
FD563533       --> ..................................................
EV568461       --> ..................................................
EW718004       --> ..................................................

               801    -    851
UN13784        --> CACTACATCACCTGGTACTGCCCCGAGGCTTTTACGCTGAGTAAGCAGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570982       <-- ..................................................
EY911694       <-- ..................................................
EX766241       <-- ..................................................
FD567147       <-- ..................................................
EV570981       <-- ..................................................
FD960559       <-- ..................................................
EV573183       <-- ..................................................
EW721596       <-- ..................................................
EY915937       --> ..................................................
EV565701       --> CACTACATCACCTGGTACTGCCCCGAGGCTTTTACGCTGAGTAAGCAGTG
FD549717       --> CACTACATCACCTGGTACTGCCCCGAGGCTTTTACGCTGAGTAAGCAGTG
EX761852       --> ..................................................
EV549894       --> ..................................................
FD964600       --> ..................................................
FD563533       --> ..................................................
EV568461       --> ..................................................
EW718004       --> ..................................................

               851    -    901
UN13784        --> CAAGTCTCAGTGTATCAACCATGGAAGGTACTGTGCGCCTGATCCTGAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570982       <-- ..................................................
EY911694       <-- ..................................................
EX766241       <-- ..................................................
FD567147       <-- ..................................................
EV570981       <-- ..................................................
FD960559       <-- ..................................................
EV573183       <-- ..................................................
EW721596       <-- ..................................................
EY915937       --> ..................................................
EV565701       --> CAAGTCTCAGTGTATCAACCATGGAAGGTACTGTGCGCCTGATCCTGAGC
FD549717       --> CAAGTCTCAGTGTATCAACCATGGAAGGTACTGTGCGCCTGATCCTGAGC
EX761852       --> ..................................................
EV549894       --> ..................................................
FD964600       --> ..................................................
FD563533       --> ..................................................
EV568461       --> ..................................................
EW718004       --> ..................................................

               901    -    951
UN13784        --> AGGATTTTACTAAAGGGTATGATGGGAAGGATGTTGTGGTTCAGAATCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570982       <-- ..................................................
EY911694       <-- ..................................................
EX766241       <-- ..................................................
FD567147       <-- ..................................................
EV570981       <-- ..................................................
FD960559       <-- ..................................................
EV573183       <-- ..................................................
EW721596       <-- ..................................................
EY915937       --> ..................................................
EV565701       --> AGGATTTTACTAAAGGGTATGATGGGAAGGATGTTGTGGTTCAGAATCTG
FD549717       --> AGGATTTTACTAAAGGGTATGATGGGAAGGATGTTGTGGTTCAGAATCTA
EX761852       --> ..................................................
EV549894       --> ..................................................
FD964600       --> ..................................................
FD563533       --> ..................................................
EV568461       --> ..................................................
EW718004       --> ..................................................

               951    -   1001
UN13784        --> CGCCAGGCTTGTGTTTATAGAGTGTTGAATGAGGCTGGCAAGCCTTGGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570982       <-- ..................................................
EY911694       <-- ..................................................
EX766241       <-- ..................................................
FD567147       <-- ..................................................
EV570981       <-- ..................................................
FD960559       <-- ..................................................
EV573183       <-- ..................................................
EW721596       <-- ..................................................
EY915937       --> ..................................................
EV565701       --> CGCCAGGCGTGTGTTTATAGAGTGTTGAATGAGGCTGGCAAGCCTTGGGT
FD549717       --> CGCCAGGCTTGTGTTTATAGAGTGTTGAATGAGACTGGCAAGCCTTGGGT
EX761852       --> ..................................................
EV549894       --> ..................................................
FD964600       --> ..................................................
FD563533       --> ..................................................
EV568461       --> ..................................................
EW718004       --> ..................................................

               1001   -   1051
UN13784        --> TTGGTGGGACTATGTGACTGACTTCGCCATCAGGTGTCCGATGAAGGATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570982       <-- ..................................................
EY911694       <-- ..................................................
EX766241       <-- ..................................................
FD567147       <-- ..................................................
EV570981       <-- ..................................................
FD960559       <-- ..................................................
EV573183       <-- ..................................................
EW721596       <-- ..................................................
EY915937       --> ..................................................
EV565701       --> TTGGTGGGACTATGTGACTGACTTCGCCATCAGGTGTCCGATGAAGGATA
FD549717       --> TTGGTGGGACTATGTGACTGACTTCGCCATCAGGTGTCCGATGAAAGATA
EX761852       --> ..................................................
EV549894       --> ..................................................
FD964600       --> ..................................................
FD563533       --> ..................................................
EV568461       --> ..................................................
EW718004       --> ..................................................

               1051   -   1101
UN13784        --> ATAAGTACACTAAGGAGTGTGCAGACGAGATTATCAAGTCCCTTGACATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570982       <-- ..................................................
EY911694       <-- ..................................................
EX766241       <-- ..................................................
FD567147       <-- ..................................................
EV570981       <-- ..................................................
FD960559       <-- ..................................................
EV573183       <-- ..................................................
EW721596       <-- ..................................................
EY915937       --> ..................................................
EV565701       --> AGAAGTACACTAAGGAGTGTGCAGACGAGATTATCAAGTCCCTTGACATT
FD549717       --> ATAAGTACACTAAGGAGTGTGCAGACGAGATTATCAAGTCCCTTGACATT
EX761852       --> .....................................GTCCCTTGACATT
EV549894       --> ..................................................
FD964600       --> ..................................................
FD563533       --> ..................................................
EV568461       --> ..................................................
EW718004       --> ..................................................

               1101   -   1151
UN13784        --> GATCTCAAGAAGGTGGACAAGTGTATCGGAGACCCTAACGCAGATGTGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570982       <-- ..................................................
EY911694       <-- ..................................................
EX766241       <-- ..................................................
FD567147       <-- ..................................................
EV570981       <-- ..................................................
FD960559       <-- ..................................................
EV573183       <-- ..................................................
EW721596       <-- ..................................................
EY915937       --> ..................................................
EV565701       --> GATCTCAAGAAGGTGGACAAGTGTATCGGAGACCCTAACGCAGATGTGGA
FD549717       --> GATCTCAAGAAGGTGGACAAGTGTATCGGAGACCCTAACGCAGATGTGGA
EX761852       --> GATCTCAAGAAGGTGGACAAGTGTATCGGAGACCCTAACGCAGATGTGGA
EV549894       --> ..................................................
FD964600       --> ..................................................
FD563533       --> ..................................................
EV568461       --> ..................................................
EW718004       --> ..................................................

               1151   -   1201
UN13784        --> GAACCCTATTCTTAAAGCAGAGCAGGAGTCCCAGGTTGGCAAAGGTTCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570982       <-- ..................................................
EY911694       <-- ..................................................
EX766241       <-- ..................................................
FD567147       <-- ..................................................
EV570981       <-- ..................................................
FD960559       <-- ..................................................
EV573183       <-- ..................................................
EW721596       <-- ..................................................
EY915937       --> ..................................................
EV565701       --> GAACCCTATTCTTAAAGCAGAGCAGGAGTCCCAGGTTGGCAAAGGTTCCC
FD549717       --> GAACCCTATTCTTAAAGCAGAGCAGGAGTCCCAGGTTGGCAAAGGTTCCC
EX761852       --> GAACCCTATTCTTAAAGCAGAGCAGGAGTCCCAGGTTGGTAAAGGTTCCC
EV549894       --> ..................................................
FD964600       --> ..................................................
FD563533       --> ..................................................
EV568461       --> ..................................................
EW718004       --> ..................................................

               1201   -   1251
UN13784        --> GTGGAGACGTGACTATACTCCCAACTCTTGTAGTGAACAACAGACAATAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570982       <-- ..................................................
EY911694       <-- ..................................................
EX766241       <-- ..................................................
FD567147       <-- ..................................................
EV570981       <-- ..................................................
FD960559       <-- ..................................................
EV573183       <-- ..................................................
EW721596       <-- ..................................................
EY915937       --> ..................................................
EV565701       --> GTGGAGACGTGACTATACTCCCAACTCTTGTGGTGAACAACAGACAATAC
FD549717       --> GTGGAGACGTGACTATACTCCCAACTCTTGTAGTGAACAACAGACAATAC
EX761852       --> GTGGAGACGTGACTATACTCCCAACTCTTGTAGCGAACAACAGACAATAC
EV549894       --> ..................................................
FD964600       --> ..................................................
FD563533       --> ..................................................
EV568461       --> ..................................................
EW718004       --> ..................................................

               1251   -   1301
UN13784        --> AGAGGTAAACTGGAGAAAGGGGCAGTGCTGAAAGCTATGTGTTCAGGTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570982       <-- ..................................................
EY911694       <-- ..................................................
EX766241       <-- ..................................................
FD567147       <-- ..................................................
EV570981       <-- ..................................................
FD960559       <-- ..................................................
EV573183       <-- ..................................................
EW721596       <-- ..................................................
EY915937       --> ..................................................
EV565701       --> AGAGGTAAACTGGAGAAAGGGGCAGTGCTGAAAGCTATGTGTTCAG-TTT
FD549717       --> AGAGGTAAACTGGAGAAAGGGGCAGTGCTGAAAGCTATGTGTTCAGGTTT
EX761852       --> AGAGGTAAACTGGAGAAAGGGGCAGTGCTGAAAGCTATGTGTTCAGGTTT
EV549894       --> ..................................................
FD964600       --> ..................................................
FD563533       --> ..................................................
EV568461       --> ..................................................
EW718004       --> ..................................................

               1301   -   1351
UN13784        --> TCAAGAGTCAACAGAACCAGCTATATGTCTAACTGAAGATTTAAATACTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570982       <-- ..AAGAGTCAACAGAACCAGCTATATGTCTAACTGAAGATTTAAATACTA
EY911694       <-- ..................................................
EX766241       <-- ..................................................
FD567147       <-- ..................................................
EV570981       <-- ..................................................
FD960559       <-- ..................................................
EV573183       <-- ..................................................
EW721596       <-- ..................................................
EY915937       --> ..................................................
EV565701       --> TCAAGAGTCAACAGAACCAGCTATATGTCTAACTGAAGATTTAAATACTA
FD549717       --> TCAAGAGTCAACAGAACCAGCTATATGTCTAACTGAAGATTTAA-TACTA
EX761852       --> TCAAGAGTCAACAGAACCAGCTATATGTCTAACTGAAGATTTAAATACTA
EV549894       --> ..................................................
FD964600       --> ..................................................
FD563533       --> ..................................................
EV568461       --> ..................................................
EW718004       --> ..................................................

               1351   -   1401
UN13784        --> ATGAATGTTTGGAAAACAATGGTGGGTGCTGGCAAGACAGAGCTTCCAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570982       <-- ATGAATGTTTGGAAGACAATGGTGGGTGCTGGCAAGACAGAGCTTCCAAC
EY911694       <-- .............AAACAATGGTGGGTGCTGGCAAGACAGAGCTTCCAAC
EX766241       <-- ..................................................
FD567147       <-- ..................................................
EV570981       <-- ..................................................
FD960559       <-- ..................................................
EV573183       <-- ..................................................
EW721596       <-- ..................................................
EY915937       --> ..................................................
EV565701       --> ATGAATGTTTGGA-GACAATGGGTGGTGCTGGCA-GACAGAGCTTCCAAC
FD549717       --> ATGAATGTT-GGAAA-CAATGGTGGGTGCTGGCAAGACAGAGCTTCCA-C
EX761852       --> ATGAATGTTTGGAAAACAATGGTGGGTGTTGGCAAGACAGAGCTTCCAAC
EV549894       --> ......................................gGAGCTTCCAAC
FD964600       --> ..................................................
FD563533       --> ..................................................
EV568461       --> ..................................................
EW718004       --> ..................................................

               1401   -   1451
UN13784        --> TTAACTGCATGCCGGGATACATATAGGGGAAGATTGTGTGAGTGCCCTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570982       <-- TTAACTGCATGCCGGGATACATATAGGGGAAGATTGTGTGAGTGCCCTAC
EY911694       <-- TTAACTGCATGCCGGGATACATATAGGGGAAGATTGTGTGAGTGCCCTAC
EX766241       <-- ..................................................
FD567147       <-- ..................................................
EV570981       <-- ..................................................
FD960559       <-- ..................................................
EV573183       <-- ..................................................
EW721596       <-- ..................................................
EY915937       --> ..................................................
EV565701       --> TTAACTGCATGCCGG-ATACAT............................
FD549717       --> TTAACTGCATGCCGGGATACATATAGGGGACGATTGTGTGA.........
EX761852       --> TTAACTGCATGCCGGGATACATATAGGGGAAGATTGTGTGAGTGCCCTAC
EV549894       --> TTAACTGCATGCCGGGATACATATAGGGGAAGATTGTGTGAGTGCCCTAC
FD964600       --> .............................gAGATTGTGTGAGTGCCCTAC
FD563533       --> ...............................GATTGTGTGAGTGCCCTAC
EV568461       --> .........................................GTGCCCTAC
EW718004       --> ..................................................

               1451   -   1501
UN13784        --> TGTTCAAGGTATTAAATTTGCTGGTGACGGTTACACTCACTGCAGAGCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570982       <-- TGTTCAAGGTATTAAATTTGCTGGTGACGGTTACACTCACTGCAGAGCCT
EY911694       <-- TGTTCAAGGTATTAAATTTGCTGGTGACGGTTACACTCACTGCAGAGCCT
EX766241       <-- ..................................................
FD567147       <-- ..................................................
EV570981       <-- ..................................................
FD960559       <-- ..................................................
EV573183       <-- ..................................................
EW721596       <-- ..................................................
EY915937       --> ..................................................
EV565701       --> ..................................................
FD549717       --> ..................................................
EX761852       --> TGTTCAAGGTATTAAATTTGCTGGTGACGGTTACACTCACTGCAGAGCCT
EV549894       --> TGTTCAAGGTATTAAATTTGCTGGTGACGGTTACACTCACTGCAGAGCCT
FD964600       --> TGTTCAAGGTATTAAATTTGCTGGTGACGGTTACACTCACTGCAGAGCCT
FD563533       --> TGTTCAAGGTATTAAATTTGCTGGTGACGGTTACACTCACTGCAGAGCCT
EV568461       --> TGTTCAAGGTATTAAATTTGCTGGTGACGGTTACACTCACTGCAGAGCCT
EW718004       --> ..................................................

               1501   -   1551
UN13784        --> CTGGAGCTTTGCATTGTGGTATCAACAATGGAGGATGCTGGAGAGAAACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570982       <-- CTGGAGCTTTGCATTGTGGTATCAACAATGGAGGATGCTGGAGAGAAACC
EY911694       <-- CTGGAGCTTTGCATTGTGGTATCAACAATGGAGGATGCTGGAGAGAAACC
EX766241       <-- ................................................CC
FD567147       <-- ..................................................
EV570981       <-- ..................................................
FD960559       <-- ..................................................
EV573183       <-- ..................................................
EW721596       <-- ..................................................
EY915937       --> ..................................................
EV565701       --> ..................................................
FD549717       --> ..................................................
EX761852       --> CTGGAGCTTTTCATTGTGGTATCAACAATGGAGGATGCTGGAGAGAAACC
EV549894       --> CTGGAGCTTTGCATTGTGGTATCAACAATGGAGGATGCTGGAGAGAAACC
FD964600       --> CTGGAGCTTTGCATTGTGGTATCAACAATGGAGGATGCTGGAGAGAAACC
FD563533       --> CTGGAGCTTTGCATTGTGGTATCAACAATGGAGGATGCTGGAGAGAAACC
EV568461       --> CTGGAGCTTCGCATTGTGGTATCAACAATGGAGGATGCTGGAGAGAAACC
EW718004       --> ..................................................

               1551   -   1601
UN13784        --> CGAGGCAGCTACACTTACTCTGCTTGCGTAGATGATCATTCAAATGGTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570982       <-- CGAGGCAGCTACACTTACTCTGCTTGCGTAGATGATCATTCAAATGGTTG
EY911694       <-- CGAGGCAGCTACACTTACTCTGCTTGCGTAGATGATCATTCAAATGGTTG
EX766241       <-- CGAGGCAGCTACACTTACTCTGCTTGCGTAGATGATCATTCAAATGGTTG
FD567147       <-- ..................TCTGCTTGCGTAGATGATCATTCAAATGGTTG
EV570981       <-- ........................TGCGTAGATGATCATTCAAATGGTTG
FD960559       <-- ..........................................AATGGTTG
EV573183       <-- ..................................................
EW721596       <-- ..................................................
EY915937       --> ..................................................
EV565701       --> ..................................................
FD549717       --> ..................................................
EX761852       --> CGAGGCAGCTACACTTACTCTGCTTGCGTAGATGATCATTCAAATGGTTG
EV549894       --> CGAGGCAGCTACACTTACTCTGCTTGCGTAGATGATCATTCAAATGGTTG
FD964600       --> CGAGGCAGCTACACTTACTCTGCTTGCGTAGATGATCATTCAAATGGTTG
FD563533       --> CGAGGCAGCTACACTTACTCTGCTTGCGTAGATGATCATTCAAATGGTTG
EV568461       --> CGAGGCAGCTACACTTACTCTGCTTGCGTAGATGATCATTCAAATGGTTG
EW718004       --> ..................................................

               1601   -   1651
UN13784        --> CAAATGCCC-ACTTGGGTTCAAGGGCGATGGAGTAAAGAGCTGTGAAGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570982       <-- CAAATGCCC-ACTTGGGTTCAAGGGCGATGGAGTAAAGAGCTGTGAAGAT
EY911694       <-- CAAATGCCC-ACTTGGGTTCAAGGGCGATGGAGTAAAGAGCTGTGAAGAT
EX766241       <-- CAAATGCCC-ACTTGGGTTCAAGGGCGATGGAGTAAAGAGCTGTGAAGAT
FD567147       <-- CAAATGCCC-ACTTGGGTTCAAGGGCGATGGAGTGAAGAGCTGTGAAGAT
EV570981       <-- CAAATGCCC-ACTTGGGTTCAAGGGCGATGGAGTAAAGAGCTGTGAAGAT
FD960559       <-- CAAATGCCCCACTTGAGTTCAAGGGCGATGGAGTAAAGAGCTGTGAAGAT
EV573183       <-- ..................................................
EW721596       <-- ..................................................
EY915937       --> ..................................................
EV565701       --> ..................................................
FD549717       --> ..................................................
EX761852       --> CAAATGCCC-ACTTGGGTTCAAGGGCGATGGAGTAAAGAGCTGTGAAGAT
EV549894       --> CAAATGCCC-ACTTGGGTTCAAGGGCGATGGAGTAAAGAGCTGTGAAGAT
FD964600       --> CAAATGCCC-ACTTGAGTTCAAGGGCGATGGAGTAAAGAGCTGTGAAGAT
FD563533       --> CAAATGCCC-ACTTGGGTTCAAGGGCGATGGAGTGAAGAGCTGTGAAGAT
EV568461       --> CAAATGCCC-ACTTGGGTTCAAGGGCGATGGAGTAAAGAGCTGTGAAGAT
EW718004       --> ..................................................

               1651   -   1701
UN13784        --> GTGGACGAGTGCAAAGAAAAAAAGGTTTGCCAGTGCGCAGACTGTAAATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570982       <-- GTGGACGAGTGCAAAGAAAAAACGGTTTGCCAGTGCGCAGACTGTAAATG
EY911694       <-- GTGGACGAGTGCAAAGAAAAAAAGGTTTGCCAGTGCGCAGACTGTAAATG
EX766241       <-- GTGGACGAGTGCAAAGAAAAAAAGGTTTGCCAGTGCGCAGACTGTAAATG
FD567147       <-- GTGGACGAGTGCAAAGAAAAAAAGGTTTGCCAGTGCGCAGACTGTAAATG
EV570981       <-- GTGGACGAGTGCAAAGAAAAAACGGTTTGCCAGTGCGCAGACTGTAAATG
FD960559       <-- ATGGACGAGTGCAAAGAAAAAAAGGTTTGCCAGTGCGTAGACTGTAAATG
EV573183       <-- .................................................G
EW721596       <-- ..................................................
EY915937       --> ..................................................
EV565701       --> ..................................................
FD549717       --> ..................................................
EX761852       --> GTGGACGAGTGCAAAGAAAAAAAGGTTTGCCAGTGCGCAGACTGTAAATG
EV549894       --> GTGGACGAGTGCAAAGAAAAAAAG-TTTGCCAGTGCGCAGACTGTAAATG
FD964600       --> ATGGACGAGTGCAAAGAAAAAAAGGTTTGCCAGTGCGTAGACTGTAAATG
FD563533       --> GTGGACGAGTGCAAAGAAAAAAAGGTTTGCCAGTGCGCAGACTGTAAATG
EV568461       --> GTGGACGAGTGCGAAGAAAAAAAGGTTTGCCATTGCGCAGACTGTAAATG
EW718004       --> ..................................................

               1701   -   1751
UN13784        --> TAAAAACACATGGGG-AAGTTATGAA-TGCAGCTGCAAGAATGGTTT-GC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570982       <-- TAAAAACACATGGGG-AAGTTATGAA-TTCAGCTGCAAGAATGGTTT-GC
EY911694       <-- TAAAAACACATGGGG-AAGTTATGAA-TGCAGCTGCAAGAATGGTTT-GC
EX766241       <-- TAAAAACACATGGGG-AAGTTATGAA-TGCAGCTGCAAGAATGGTTT-GC
FD567147       <-- TAAAAACACATGGGG-AAGTTATGAA-TGCAGCTGCAAGAATGGTTT-GC
EV570981       <-- TAAAAACACATGGGG-AAGTTATGAA-TTCAGCTGCAAGAATGGTTT-GC
FD960559       <-- TAAAAACACATGGGG-AAGTTATGAA-TGCAGCTGCAAGAATGGTTT-GC
EV573183       <-- TAAAAACACATGGGGGAAGTTATGAAATGCAGCTGCAAGAATGGTTT-GC
EW721596       <-- ..................GTTATGAA-TGCAGCTGCAAGAATGGTTT-GC
EY915937       --> ..................................................
EV565701       --> ..................................................
FD549717       --> ..................................................
EX761852       --> TAAAA-CACATGGGG-AAGTTATGAA-TGCAGCTGCAAGAATGGTTT-GC
EV549894       --> TAAAAACACATGGGG-AAGTTATGAA-TGCAGCTGCAAGAATGGTTT-GC
FD964600       --> TAAAAACACATGGGG-AAGTTATGAA-TGCAGCTGCAAGAATGGTTT-GC
FD563533       --> TAAAAACACATGGGG-AAGTTATGAA-TGCAGCTGCAAGAATGGTTT-GC
EV568461       --> TAAAAACACATGGGG-AAGTTATGAA-TGCAGCTGCAAGAATGGTTTTGC
EW718004       --> ..................GTTATGAA-TGCAGCTGCAAGAATGGTTT-GC

               1751   -   1801
UN13784        --> TCTACATGCGTGAACACGACACGTGTATAGGTTCAAACAAAGTTGGAACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570982       <-- TCTACATGCGTGAACACGACACTTGTATAGGTTCAAGCAAAGTTGGAACT
EY911694       <-- TCTACATGCGTGAACACGACACGTGTATAGGTTCAAACAAAGTTGGAACT
EX766241       <-- TTTACATGCGTGAACACGACACGTGTATAGGTTCAAACAAAGTTGGAACT
FD567147       <-- TCTACATGCGTGAACACGACACGTGTATAGGTTCAAACAAATTTGGAACT
EV570981       <-- TCTACATGCGTGAACACGACACTTGTATAGGTTCAAGCAAAGTTGGAACT
FD960559       <-- TCTACATGCGTGAACACGACACGTGTATAGGTTCAAACAAAGTTGGAACT
EV573183       <-- TCTACATGCGTGAACACGACACGTGTATAGGTTCAAACAAAGTTGGAACT
EW721596       <-- TCTACATGCGTGAACACGACACGTGTATAGGTTCAAACAAAGTTGGAACT
EY915937       --> ..................................................
EV565701       --> ..................................................
FD549717       --> ..................................................
EX761852       --> TCTACATGCGTGA-CACGACACGTGTATAG-TTCAAACAAAGTTGGAACT
EV549894       --> TCTACATGCGTGAACACGACACGTGTATAGGTTCAAACAAAGTTGGAACT
FD964600       --> TCTACATGCGTGAACACGACACGTGTATAGGTTCAAACAAAGTTGGAACT
FD563533       --> TCTACATGCGTGAACACGACACGTGTATAGGTTCAAACAAATTTGGAACT
EV568461       --> TCTACATGCGTGAACACGACACGTGTATAGGTTCAAACAAAGTTGGAACT
EW718004       --> TCTACATGCGTGAACACGACACGTGTATAGGTTCAAACAAAGTTGGAACT

               1801   -   1851
UN13784        --> ACAAAGCTCAGCTGGAGCTTTTTGTGGTTTCTTATAATCGGAGTGGGTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570982       <-- ACAAAGCTCAGCTGGAGCTTTTTGTGGTTTCTTATAATCGGAGTGGGTGT
EY911694       <-- ACAAAGCTCAGCTGGAGCTTTTTGTGGTTTCTTATAATCGGAGTGGGTGT
EX766241       <-- ACAAAGTTCAGCTGGAGCTTTTTGTGGTTTTTTATAATCGGAGTGGGTGT
FD567147       <-- ACAAAGCTCAGCTGGAGCTTTTTGTGGTTTTTTATAATCGGAGTGGGTGT
EV570981       <-- ACAAAGCTCAGCTGGAGCTTTTTGTGGTTTCTTATAATCGGAGTGGGTGT
FD960559       <-- ACAAAGCTCAGCTGGAGCTTTTTGTGGTTTCTTATAATCGGAGTGGGTGT
EV573183       <-- ACAAAGCTCAGCTGGAGCTTTTTGTGGTTTCTTATAATCGGAGTGGGTGT
EW721596       <-- ACAAAGCTCAGCTGGAGCTTTTTGTGGTTTCTTATAATCGGAGTGGGTGT
EY915937       --> ..................................................
EV565701       --> ..................................................
FD549717       --> ..................................................
EX761852       --> ACAAAGCTCAGCTGGAGCTTTT............................
EV549894       --> ACAAAGCTCAGCTGGAGCTTTTTGTGGTTTCTTATAATCGGAGTGGGTGT
FD964600       --> ACAAAGCTCAGCTGGAGCTTTTTGTGGTTTCTTATAATCGGAGTGGGTGT
FD563533       --> ACAAAGCTCAGCTGGAGCTTTTTGTGGTTTCTTATA-TCGGAGTGGGTGT
EV568461       --> ACAAAGCTCAGCTGGAGCTTTTTGTGGTTTCTTATAATCGGAGTGGGTGT
EW718004       --> ACAAAGCTCAGCTGGAGCTTTTTGTGGTTTCTTATAATCGGAGTGGGTGT

               1851   -   1901
UN13784        --> TGCAGGTCTTGCTGGATATGCCGTCTACAAATACAGGATCAGGACTTACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570982       <-- TGCAGGTCTTGCCGGATATGCCGTCTACAAATACAGGATAAGGAGTTACA  Raphanus raphanistrum subsp. landra
EY911694       <-- TGCAGGTCTTGCTGGATATGCCGTCTACAAATACAGGATCAGGACTTACA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX766241       <-- TGCAGGTCTTGCTGGATATGCCGTTTACAAATACAGGATCAGGACTTACA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD567147       <-- TGCAGGTCTTGCCGGATATGCCGTCTACAAATACAGGATCAGGACTTACA  Raphanus sativus var. oleiformis
EV570981       <-- TGCAGGTCTTGCCGGATATGCCGTCTACAAATACAGGATAAGGAGTTACA  Raphanus raphanistrum subsp. landra
FD960559       <-- TGCAGGTCTTGCTGGATATGCCGTCTACAAATACAGGATCAGGACTTACA  Raphanus raphanistrum subsp. maritimus
EV573183       <-- TGCAGGTCTTGCTGGATATGCCGTCTACAAATACAGGTTCAGGACTTACA  Raphanus raphanistrum subsp. landra
EW721596       <-- TGCAGGTCTTGCCGGATATGCCGTCTACAAATACAGGATCAGGACTTACA  Raphanus sativus var. oleiformis
EY915937       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV565701       --> ..................................................  Raphanus raphanistrum subsp. landra
FD549717       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX761852       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV549894       --> TGCAGGTCTTGCTGGATATGCCGTCTACAAATACAGGATCAGGACTTACA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD964600       --> TGCAGGTCTTGCTGGATATGCCGTCTACAAATACAGGATCAGGACTTACA  Raphanus raphanistrum subsp. maritimus
FD563533       --> TGCAG-TCTTGCCGGATATGCCGTCTACAAAT..................  Raphanus sativus var. oleiformis
EV568461       --> TGCAGGTCTTGCTGGATATGCCGTCTACAAATACAGGATCAGGACTTACA  Raphanus raphanistrum subsp. landra
EW718004       --> TGCAGGTCTTGCCGGATATGCCGTCTACAAATACAGGATCAGGACTTACA  Raphanus sativus var. oleiformis

               1901   -   1951
UN13784        --> TGGATGCGGAGATAAGAGGCATCATGGCGCAGTACATGCCATTGGAGAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570982       <-- TGGATGCGGAGATAAGAGGCATCATGGCGCAGTACATGCCATTGGAGAGC
EY911694       <-- TGGATGCGGAGATAAGAGGCATCATGGCGCAGTACATGCCATTGGAGAGC
EX766241       <-- TGGATGGGGAGATAAGAGGCATCATGGCGCAGTACATGCCATTGGAGAGC
FD567147       <-- TGGATGCGGAGATAAGAGGCATCATGGCGCAGTACATGCCATTGGAGAGC
EV570981       <-- TGGATGCGGAGATAAGAGGCATCATGGCGCAGTACATGCCATTGGAGAGC
FD960559       <-- TGGATGCGGAGATAAGAGGCATCATGGCGCAGTACATGCCATTGGAGAGC
EV573183       <-- TGGATGCGGAGATAAGAGGCATCATGGCGCAGTACATGCCATTGGAGAGC
EW721596       <-- TGGATGCGGAGATAAGAGGCATCATGGCGCAGTACATGCCATTGGAGAGC
EY915937       --> ..................................................
EV565701       --> ..................................................
FD549717       --> ..................................................
EX761852       --> ..................................................
EV549894       --> TGGATGCGGAGATAAGAGGCATCATGGCGCAGTACATGCCATTGGAGAGC
FD964600       --> TGGATGCGGAGATAAGAGGCATCATGGCGCAGTACATGCCATTGGAGAGC
FD563533       --> ..................................................
EV568461       --> TGGATGCGGAGATAAGAGGCATCATGGCGCAGTACATGCCATTGGAGAGC
EW718004       --> TGGATGCGGAGATAAGAGGCATCATGGCGCAGTACATGCCATTGGAGAGC

               1951   -   2001
UN13784        --> CAACCTACCCCAAGTGGTCCTCATATGGATATATGAGTGAAGTTGTCAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570982       <-- CAACCCACCCCAAGTGGTCCTCATATGGATATATGAGTGAAGTTGTCAAC
EY911694       <-- CAACCTACCCCAAGTGGTCCTCATATGGATATATGAGTGAAGTTGTCAAC
EX766241       <-- CAACCTACCCCAAGTGGTCCTCATATGGATATATGAGTGAAGTTGTCAAC
FD567147       <-- CAACCTACCCCAAGTGGTCCTCATATGGATATATGAGTGAAGTTGTCAAC
EV570981       <-- CAACCCACC.........................................
FD960559       <-- CAACCTACCCCAAGTGGTCCTCATATGGATATATGAGTGAAGTTGTCAAC
EV573183       <-- CAACCTACCCCAAGTGGTCCTCATATGGATATATGAGTGAAGTTGTCA..
EW721596       <-- CAACCTACCCCAAGTGGTCCTCATATGGATATATGAGTGAAGTTGTCAAC
EY915937       --> ..................................................
EV565701       --> ..................................................
FD549717       --> ..................................................
EX761852       --> ..................................................
EV549894       --> CAACCTACCCCAAGTGGTCCTCATATGGATATATGAGTGAAGTTGTCAAC
FD964600       --> CAACCTACCCCAAGTGGTCCTCATATGGATATATGAGTGAAGTTGTCAAC
FD563533       --> ..................................................
EV568461       --> CAACCTACCCCAAGTGGTCCTCATATGGATATATGAGTGAAGTTGTCAAC
EW718004       --> CAACCTACCCCAAGTGGTCCTCATATGGATATATGAGTGAAGTTGTCAAC

               2001   -   2051
UN13784        --> ACAAACCAAGTGTCTCTCTTTCCACGGGAAGCTTCTTCTGTGTTTCTTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570982       <-- ATAAACCAAGTGACTCTCTTTCCACGGGAAGCTTCTTCTGTGTTTCTTCC  Raphanus raphanistrum subsp. landra
EY911694       <-- ACAAACCAAGTGTCTCTCTTTCCACGGGAAGCTTCTTCTGTGTTTCTTCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX766241       <-- ACAAACCAAGTGTCTTTCTTTCCACGGGAAGCTTTTTTTGTGTTTTTTCC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD567147       <-- ACAAACCAAGATACTCTCTTTCCACGGGAAGCTTTTTCTGTGTTTTTTCC  Raphanus sativus var. oleiformis
EV570981       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD960559       <-- ACAAACCAAGTGTCTCTCTTTCCACGGGAAGCTTTTTCTGTGTTTCCTCC  Raphanus raphanistrum subsp. maritimus
EV573183       <-- ..................................................  Raphanus raphanistrum subsp. landra
EW721596       <-- ACAAACCAAGATACTCTCTTTCCACGGGAAGCTTCTTCTGTGTTTCTTCC  Raphanus sativus var. oleiformis
EY915937       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV565701       --> ..................................................  Raphanus raphanistrum subsp. landra
FD549717       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX761852       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV549894       --> ACAAACCAAGTGTCTCTCTTTCCACGGGAAGCTTCTTCTGTGTTTCTTCC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD964600       --> ACAAACCAAGTGTCTCTCT...............................  Raphanus raphanistrum subsp. maritimus
FD563533       --> ..................................................  Raphanus sativus var. oleiformis
EV568461       --> ACAAACCAAGTGTCTCTCTTTCCACGGGAAGCTTCTTCTGTGTTTCTTCC  Raphanus raphanistrum subsp. landra
EW718004       --> ACAAACCAAGATACTCTCTTTCCACGGGAAGCTTCTTCTGTGTTTCTTCC  Raphanus sativus var. oleiformis

               2051   -   2101
UN13784        --> ATGTAAATGAATCTAATAGACTTGAGAGAAGCCACACAAAAAATAATAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570982       <-- ATGTAAATGAATCTAATAGACTTGAGAGAAGCCACA..............
EY911694       <-- ATGTAAATGAATCTAATAGACTTGAGAGAAGCCACACAAAAAATAATAAT
EX766241       <-- ATGTAAATGAATTTAATAGACTTGAGAGAAGCCACACAAAAAATAATAAT
FD567147       <-- ATGTAAATGAATCTAATAGACTTGAGAGAAGCCACACAAAAAATAATAAT
EV570981       <-- ..................................................
FD960559       <-- ATGTAAATGAATTTAATAGACTTGAGAGAAGCCACACAAAAAATAATAAT
EV573183       <-- ..................................................
EW721596       <-- ATGTAAATGAATCTAATAGACTTGAGAGAAGCCACACAAAAAATAATAAT
EY915937       --> ..................................................
EV565701       --> ..................................................
FD549717       --> ..................................................
EX761852       --> ..................................................
EV549894       --> ATGTAAATGAATCTAATAGACTTGAGAGAAGCCACACAAAAAATAATAAT
FD964600       --> ..................................................
FD563533       --> ..................................................
EV568461       --> ATGTAAATGAATCTAATAGACTTGAGAGAAGCCACAC.............
EW718004       --> ATGTAAATGAATCTAATAGACTTGAGAGAAGCCACACAAAAAATAATAAT

               2101   -   2151
UN13784        --> TTAAGTGTACTCAGCGCTTTTTGTAAGGGATGTGGATTTGAAGATGGAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570982       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY911694       <-- TTAAGTGTA-TCTGCGCTTTTTGTAAGGGATGTGGATTTGAAGATGGAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX766241       <-- TTAAGTGTA-TTTGCGCTTTTTGTAAGGGATGTGGATTTGAAGATGGAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD567147       <-- TTAAGTGTACTCAGCGCTTTTTGTAAGGGATGTGGATTTGAAGATGGAAT  Raphanus sativus var. oleiformis
EV570981       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD960559       <-- TTAAGTGTA-TTTGCGCTTTTTGTAAGGGATGTGGATTTGAAGATGGAAT  Raphanus raphanistrum subsp. maritimus
EV573183       <-- ..................................................  Raphanus raphanistrum subsp. landra
EW721596       <-- TTAAGTGTACTCAGCGCTTTTTGTAAGGGATGTGGATTTGAAGATGGAAT  Raphanus sativus var. oleiformis
EY915937       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV565701       --> ..................................................  Raphanus raphanistrum subsp. landra
FD549717       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX761852       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV549894       --> TTAAGTGTA-TCTGCGCTTTTTGTAAG-TATGTGGATTTGAAGATGGAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD964600       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD563533       --> ..................................................  Raphanus sativus var. oleiformis
EV568461       --> ..................................................  Raphanus raphanistrum subsp. landra
EW718004       --> TTAAGTGTACTCAGCGCTTTTTGTAAGGGATGTGGATTTGAAGATGGAAT  Raphanus sativus var. oleiformis

               2151   -   2201
UN13784        --> CACTCTTTTGTCTGCAATTACTCTTGCAATGTAAAATAAAGACTTTAATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570982       <-- ..................................................
EY911694       <-- CACTCTTTTGTCTGC...................................
EX766241       <-- CACTTTTTTGTTTGCAATTACTCTTGCAATGTAAAATAAAGACTTTAATG
FD567147       <-- CACTCTTTTGTCTGCAATTACTCTTGCAATGTAGAATAAAGACTTTAATG
EV570981       <-- ..................................................
FD960559       <-- CACTCTTTTGTCTGCAATTACTCCTGCAATGTAAAATAAAGACTTTAATG
EV573183       <-- ..................................................
EW721596       <-- CACTCTTTTGTCTGCAATTACTCTTGCAATGTAAAATAAAGACTTTAATG
EY915937       --> ..................................................
EV565701       --> ..................................................
FD549717       --> ..................................................
EX761852       --> ..................................................
EV549894       --> CACTCTTTTGTCTGCAATTACTCTTGCAATGTAAAt..............
FD964600       --> ..................................................
FD563533       --> ..................................................
EV568461       --> ..................................................
EW718004       --> CACTCTTTTGTCTGCAATTACTCTTGCAATGTAAAATAAAGACTTTAATG

               2201   -   2251
UN13784        --> GATGAATAAATAAGTAGGAGAGTTTGCATCTATAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570982       <-- ...................................
EY911694       <-- ...................................
EX766241       <-- GATGAATAAATAAGTAGGAGAGTTTGCATtt....
FD567147       <-- GATGAATAAATAAGTAGGAGAGTTTGCAcc.....
EV570981       <-- ...................................
FD960559       <-- GAcg...............................
EV573183       <-- ...................................
EW721596       <-- GATGAATAAATAAGTAGGAGAGTTTGCATCTATAT
EY915937       --> ...................................
EV565701       --> ...................................
FD549717       --> ...................................
EX761852       --> ...................................
EV549894       --> ...................................
FD964600       --> ...................................
FD563533       --> ...................................
EV568461       --> ...................................
EW718004       --> GATGAATAAATAAGTAGGAGAGTTTGCATCTATAT