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Alignment for radish unigene UN13807

               1      -     51
UN13807        --> GGAATCTCTTCTTCGTGTTTCATTTCTGTACATGTAAGCACCGCTTCTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX893624       <-- ...............................ATGTAAGCACCGCTTCTGG
FD544610       <-- ...............................ATGTAAGCACCGCTTCTGG
EW719444       <-- ..................................................
EV530822       <-- ..................................................
EV540524       <-- ..................................................
FD552375       <-- ..................................................
FD529839       <-- ..................................................
EY918244       <-- ..................................................
EX891116       <-- ..................................................
EW731094       <-- ..................................................
FD964993       --> GGAATCTCTTCTTCGTGTTTCATTTCTGTACATGTAAGCACCGCTTCTGG
EX888334       --> .........ggcTCGTGTTTCATCTCTGTACATGTAAGCACCGCTTCTGG
EV528237       --> .........................ggGTACATGTAAGCACCGCTTCTGG
FD548417       --> .............................ggATGTAAGCACCGCTTCTGG
EY922248       --> ..................................................
EY948644       --> ..................................................
EV526310       --> ..................................................
EV535975       --> ..................................................
FD555997       --> ..................................................
FD533727       --> ..................................................
EX890530       --> ..................................................
EX886822       --> ..................................................
EW735703       --> ..................................................
EW736008       --> ..................................................

               51     -    101
UN13807        --> GTTACACGGCAAACATGGCTTCTCTATCGTACGGAGTTTCGAACATATGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX893624       <-- GTTACACG-CAAACATGGCTTCTCTATCGTACGGAGTTTCGAACATATGC  Raphanus sativus var. oleiformis
FD544610       <-- GTTACACGGCAGACATGGCTTCTCTATCGTACGGAGTTTCGAACATATGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW719444       <-- .......gggAAACATGGCTTCTCTATCGTACGGAGTTTCGAACATATGC  Raphanus sativus var. oleiformis
EV530822       <-- ........ggagACATGGCTTCTCTATCGTACGGAGTTTCGAACATATGC  Raphanus raphanistrum subsp. maritimus
EV540524       <-- ........ggagACATGGCTTCTCTATCGTACGGAGTTTCGAACATATGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD552375       <-- .............CATGGCTTCTCTATCGTACGGAGTTTCGAACATATGC  Raphanus raphanistrum subsp. landra
FD529839       <-- ..............................................ATGC  Raphanus raphanistrum subsp. maritimus
EY918244       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX891116       <-- ..................................................  Raphanus sativus var. oleiformis
EW731094       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD964993       --> GTTACACGGCAGACATGGCTTCTCTATCGTACGGAGTTTCGAACATATGC  Raphanus raphanistrum subsp. maritimus
EX888334       --> GTTACACG-CAAACATGGCTTCTCTATCGTACGGAGTTTCGAACATATGC  Raphanus sativus var. oleiformis
EV528237       --> GTTACACGGCAGACATGGCTTCTCTATCGTACGGAGTTTCGAACATATGC  Raphanus raphanistrum subsp. maritimus
FD548417       --> GTTACACGGCAGACATGGCTTCTCTATCGTACGGAGTTTCGAACATATGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY922248       --> .......gggAAACATGGCTTCTCTATCGTACGGAGTTTCGAACATATGC  Raphanus raphanistrum subsp. landra
EY948644       --> ........ggAAACATGGCTTCTCTATCGTACGGAGTTTCGAACATATGC  Raphanus sativus cv Rat-Tail Radish #3870
EV526310       --> ........ggagACATGGCTTCTCTATCGTACGGAGTTTCGAACATATGC  Raphanus raphanistrum subsp. maritimus
EV535975       --> ........ggagACATGGCTTCTCTATCGTACGGAGTTTCGAACATATGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD555997       --> .......ggaaagCATGGCTTCTCTATCGTACGGAGTTTCGAACATATGC  Raphanus raphanistrum subsp. landra
FD533727       --> ...................TTCTCTATCGTACGGAGGTTCGAACATATGC  Raphanus raphanistrum subsp. maritimus
EX890530       --> ..................................................  Raphanus sativus var. oleiformis
EX886822       --> ..................................................  Raphanus sativus var. oleiformis
EW735703       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EW736008       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870

               101    -    151
UN13807        --> AGAAGCCAAGAGATTCTGTCGGCAACGGTTCAGATTCGTCCCACTGGGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX893624       <-- AGAAGCCAAGAGATTCTGTCGGCAACGGTTCAGATTCGTCCCACTGGGCT  Raphanus sativus var. oleiformis
FD544610       <-- AGAAGCCAAGAGATTCTGTCGGCAACGGTTCAGATTCGTCCCACTGGGCG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW719444       <-- AGAAGCCAAGAGATTCTGTCGGCAACGGTTCAGATTCGTCCCACTGGGCT  Raphanus sativus var. oleiformis
EV530822       <-- AGAAGCCAAGAGATTCTGTCGGCAACGGTTCAGATTCGTCCCACTGGGCG  Raphanus raphanistrum subsp. maritimus
EV540524       <-- AGAAGCCAAGAGATTCTGTCGGCAACGGTTCAGATTCGTCCCACCGGGCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD552375       <-- AGAAGCCAAGAGATTCTGTCGGCAACGGTTCAGATTCGTCCCACTGGGCT  Raphanus raphanistrum subsp. landra
FD529839       <-- AGAAGCCAAGATATTCTGTCGGCAGCGGTTCAGATTCGTCCCACTGGGCG  Raphanus raphanistrum subsp. maritimus
EY918244       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX891116       <-- ..................................................  Raphanus sativus var. oleiformis
EW731094       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD964993       --> AGAAGCCAAGAGATTCTGTCGGCAACGGTTCAGATTCGTCCCACTGGGCG  Raphanus raphanistrum subsp. maritimus
EX888334       --> AGAAGCCAAGAGATTCTGTCGGCAACGGTTCAGATTCGTCCCACTGGGCT  Raphanus sativus var. oleiformis
EV528237       --> AGAAGCCAAGATATTCTGTCGGCAACGGTTCAGATTCGTCCCACTGGGCG  Raphanus raphanistrum subsp. maritimus
FD548417       --> AGAAGCCAAGAGATTCTGTCGGCAACGGTTCAGATTCGTCCCACTGGGCG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY922248       --> AGAAGCCAAGAGATTCTGTCGGCAACGGTTCAGATTCGTCCCACTGGGCT  Raphanus raphanistrum subsp. landra
EY948644       --> AGAAGCCAAGAGATTCTGTCGGCAACGGTTCAGATTCGTCCCACTGGGCT  Raphanus sativus cv Rat-Tail Radish #3870
EV526310       --> AGAAGCCAAGAGATTCTGTCGGCAACGGTTCAGATTCGTCCCACTGGGCG  Raphanus raphanistrum subsp. maritimus
EV535975       --> AGAAGCCAAGAGATTCTGTCGGCAACGGTTCAGATTCGTCCCACCGGGCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD555997       --> AGAAGCCAAGAGATTCTGTCGGCAACGGTTCAGATTCGTCCCACTGGGCT  Raphanus raphanistrum subsp. landra
FD533727       --> AGAAGCCAAGATATTCTGTCGGCAGCGGTTCAGATTCGTCCCACTGGGCG  Raphanus raphanistrum subsp. maritimus
EX890530       --> .....................GCAACGGTTCAGATTCGTCCCACTGGGCT  Raphanus sativus var. oleiformis
EX886822       --> ..................................................  Raphanus sativus var. oleiformis
EW735703       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EW736008       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870

               151    -    201
UN13807        --> ACATATCACAGGAAGAATCAGAGCTGCGAAGAAAATCTTATATAATGGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX893624       <-- ACATATCACAGGAAGAATCAGAGCTGCGAAGAAAATCTTATATAATGGAT  Raphanus sativus var. oleiformis
FD544610       <-- ACATATCACAGGAAGAATCAGAGCTGCGAAGAAAATATTATATAATGGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW719444       <-- ACATATCACAGGAAGAATCAGAGCTGCGAAGAAAATCTTATATAATGGAT  Raphanus sativus var. oleiformis
EV530822       <-- ACATATCACAGGAAGAATCAGAGCTGCGAAGAAAATATTGTATAATGGAT  Raphanus raphanistrum subsp. maritimus
EV540524       <-- ACATATCACAGGAAGAATCAGAGCTGCGAAGAAAACCTTATATAATGGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD552375       <-- ACATATCACAGGAAGAATCAGAGCTGCGAAGAAAATCTTATATAATGGAT  Raphanus raphanistrum subsp. landra
FD529839       <-- ACATATCACAGGAAGAATCAGAGCTGCGAAGAAAATATTATATAATGGAT  Raphanus raphanistrum subsp. maritimus
EY918244       <-- ......CACAGGAAGAATCAGAGCTGCGAAGAAAATCTTATATAATGGAT  Raphanus raphanistrum subsp. landra
EX891116       <-- ..................................................  Raphanus sativus var. oleiformis
EW731094       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD964993       --> ACATATCACAGGAAGAATCAGAGCTGCGAAGAAAATATTATATAATGGAT  Raphanus raphanistrum subsp. maritimus
EX888334       --> ACATATCACAGGAAGAATCAGAGCTGCGAAGAAAATCTTATATAATGGAT  Raphanus sativus var. oleiformis
EV528237       --> ACATATCACAGGAAGAATCAGAGCTGCGAAGAAAATATTATATAATGGAT  Raphanus raphanistrum subsp. maritimus
FD548417       --> ACATATCACAGGAAGAATCAGAGCTGCGAAGAAAATATTATATAATGGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY922248       --> ACATATCACAGGAAGAATCAGAGCTGCGAAGAAAATCTTATATAATGGAT  Raphanus raphanistrum subsp. landra
EY948644       --> ACATATCACAGGAAGAATCAGAGCTGCGAAGAAAATCTTATATAATGGAT  Raphanus sativus cv Rat-Tail Radish #3870
EV526310       --> ACATATCACAGGAAGAATCAGAGCTGCGAAGAAAATATTGTATAATGGAT  Raphanus raphanistrum subsp. maritimus
EV535975       --> ACATATCACAGGAAGAATCAGAGCTGCGAAGAAAACCTTATATAATGGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD555997       --> ACATATCACAGGAAGAATCAGAGCTGCGAAGAAAATCTTATATAATGGAT  Raphanus raphanistrum subsp. landra
FD533727       --> ACATATCACAGGAAGAATCAGAGCTGCGAAGAAAATATTATATAATGGAT  Raphanus raphanistrum subsp. maritimus
EX890530       --> ACATATCACAGGAAGAATCAGAGCTGCGAAGAAAATCTTATATAATGGAT  Raphanus sativus var. oleiformis
EX886822       --> ..................................................  Raphanus sativus var. oleiformis
EW735703       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EW736008       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870

               201    -    251
UN13807        --> TGTCATCATCAGTGGAGGGGAGAGTCAATACACAAAGAATGATGTGTAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX893624       <-- TGTCATCATCAGTGGAGGGGAGAGTCAATACACAAAGAATGATGTGTAGA  Raphanus sativus var. oleiformis
FD544610       <-- TGTCATCATCAGTGGAGGGGAGAGTCAATACACAAAGAATGACGTGTAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW719444       <-- TGTCATCATCAGTGGAGGGGAGAGTCAATACACAAAGAATGATGTGTAGA  Raphanus sativus var. oleiformis
EV530822       <-- TGTCATCATCAGTGGAGGGGAGAGTCAATACACAAAGAATGACGTGTAGA  Raphanus raphanistrum subsp. maritimus
EV540524       <-- TGTCATCATCAGTGGAGGGGAGAGTCAATACACAAAGAATGATGTGTAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD552375       <-- TGTCATCATCAGTGGAGGGGAGAGTCAATACACAAAGAATGATGTGTAGA  Raphanus raphanistrum subsp. landra
FD529839       <-- TGTCATCATCAGTGGAGGGGAGAGTCAATACACAAAGAATGACGTGTAGA  Raphanus raphanistrum subsp. maritimus
EY918244       <-- TGTCATCATCAGTGGAGGGGAGAGTCAATACACAAAGAATGATGTGTAGA  Raphanus raphanistrum subsp. landra
EX891116       <-- ..................................................  Raphanus sativus var. oleiformis
EW731094       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD964993       --> TGTCATCATCAGTGGAGGGGAGAGTCAATACACAAAGAATGACGTGTAGA  Raphanus raphanistrum subsp. maritimus
EX888334       --> TGTCATCATCAGTGGAGGGGAGAGTCAATACACAAAGAATGATGTGTAGA  Raphanus sativus var. oleiformis
EV528237       --> TGTCATCATCAGTGGAGGGGAGAGTCAATACACAAAGAATGACGTGTAGA  Raphanus raphanistrum subsp. maritimus
FD548417       --> TGTCATCATCAGTGGAGGGGAGAGTCAATACACAAAGAATGACGTGTAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY922248       --> TGTCATCATCAGTGGAGGGGAGAGTCAATACACAAAGAATGATGTGTAGA  Raphanus raphanistrum subsp. landra
EY948644       --> TGTCATCATCAGTGGAGGGGAGAGTCAATACACAAAGAATGATGTGTAGA  Raphanus sativus cv Rat-Tail Radish #3870
EV526310       --> TGTCATCATCAGTGGAGGGGAGAGTCAATACACAAAGAATGACGTGTAGA  Raphanus raphanistrum subsp. maritimus
EV535975       --> TGTCATCATCAGTGGAGGGGAGAGTCAATACACAAAGAATGATGTGTAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD555997       --> TGTCATCATCAGTGGAGGGGAGAGTCAATACACAAAGAATGATGTGTAGA  Raphanus raphanistrum subsp. landra
FD533727       --> TGTCATCATCAGTGGAGGGGAGAGTCAATACACAAAGAATGACGTGTAGA  Raphanus raphanistrum subsp. maritimus
EX890530       --> TGTCATCATCAGTGGAGGGGAGAGTCAATACACAAAGAATGATGTGTAGA  Raphanus sativus var. oleiformis
EX886822       --> ..................................................  Raphanus sativus var. oleiformis
EW735703       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EW736008       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870

               251    -    301
UN13807        --> GTGAGCTCAGAATCATCTACTGAAACTGAAGAAGATTCTGCCACAAAGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX893624       <-- GTGAGCTCAGAATCATCTACTGAAACTGAAGAAGATTCTGCCACAAAGAC
FD544610       <-- GTGAGCTCAGAATCATCTACTGAAACTGAAGAAGATTCTGCCACAAAGAC
EW719444       <-- GTGAGCTCAGAATCATCTACTGAAACTGAAGAAGATTCTGCCACAAAGAC
EV530822       <-- GTGAGCTCAGAATCATCTACTGAAACTGAAGAAGATTTTGCCACAAAGAC
EV540524       <-- GTGAGCTCAGAATCATCTACTGAAACTGAAGAAGATTCTGCCACAAAGAC
FD552375       <-- GTGAGCTCAGAATCATCTACTGAAACTGAAGAAGATTCTGCCACAAAGAC
FD529839       <-- GTGAGCTCAGAATCATCTACTGAAACTGAAGAAGATTCTGCCACAAAGAC
EY918244       <-- GTGAGCTCAGAATCATCTACTGAAACTGAAGAAGATTCTGCCACAAAGAC
EX891116       <-- .......................................GCCACAAAGAC
EW731094       <-- ..................................................
FD964993       --> GTGAGCTCAGAATCATCTACTGAAACTGAAGAAGATTCTGCCACAAAGAC
EX888334       --> GTGAGCTCAGAATCATCTACTGAAACTGAAGAAGATTCTGCCAC......
EV528237       --> GTGAGCTCAGAATCATCTACTGAAACTGAAGAAGATTCTGCCACAAAGAC
FD548417       --> GTGAGCTCAGAATCATCTACTGAAACTGAAGAAGATTCTGCCACAAAGAC
EY922248       --> GTGAGCTCAGAATCATCTACTGAAACTGAAGAAGATTCTGCCACAAAGAC
EY948644       --> GTGAGCTCAGAATCATCTACTGAAACTGAAGAAGATTCTGCCACAAAGAC
EV526310       --> GTGAGCTCAGAATCATCTACTGAAACTGAAGAAGATTCTGCCACAAAGAC
EV535975       --> GTGAGCTCAGAATCATCTACTGAAACTGAAGAAGATTCTGCCACAAAGAC
FD555997       --> GTGAGCTCAGAATCATCTACTGAAACTGAAGAAGATTCTGCCACAAAGAC
FD533727       --> GTGAGCTCAGAATCATCTACTGAAACTGAAGAAGATTCTGCCACAAAGAC
EX890530       --> GTGAGCTCAGAATCA-CTACTGAAACTGAAGAAGATTCTGCCACAAAGAC
EX886822       --> ..................................................
EW735703       --> ..................................................
EW736008       --> ..................................................

               301    -    351
UN13807        --> CAAGAAGACGCCGTTTGGATACACGAGGAAGGATGTTCTCTTGATAGGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX893624       <-- CAAGAAGACGCCGTTTGGATACACGAGGAAGGATGTTCTGTTGATAGGAG  Raphanus sativus var. oleiformis
FD544610       <-- CAAGAAGACGCCGTTTGGATACACTAGGAAGGATGTTCTCTTGATTGGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW719444       <-- CAAGAAGACGCCGTTTGGATACACGAGGAAGGATGTTCTGTTGATAGGAG  Raphanus sativus var. oleiformis
EV530822       <-- CAAGAAGACGCCGTTTGGATACACGAGGAAGGATGTTTTCTTGATTGGAG  Raphanus raphanistrum subsp. maritimus
EV540524       <-- CAAGAAGACGCCGTTTGGATACACGAGGAAGGATGTTCTCTTGATAGGAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD552375       <-- CAAGAAGACGCCGTTTGGATACACGAGGAAGGATGTTCTGTTGATAGGAG  Raphanus raphanistrum subsp. landra
FD529839       <-- CAAGAAGACGCCGTTTGGATACACGAGGAAGGATGTTCTCTTGATTGGAG  Raphanus raphanistrum subsp. maritimus
EY918244       <-- CAAGAAGACGCCGTTTGGATACACGAGGAAGGATGTTCTGTTGATAGGAG  Raphanus raphanistrum subsp. landra
EX891116       <-- CAAGAAGACGCCGTTTGGATACACGAGGAAGGATGTTCTGTTGATAGGAG  Raphanus sativus var. oleiformis
EW731094       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD964993       --> CAAGAAGACGCCGTTTGGATACACGAGGAAGGATGTTCTCTTGATTGGAG  Raphanus raphanistrum subsp. maritimus
EX888334       --> ..................................................  Raphanus sativus var. oleiformis
EV528237       --> CAAGAAGACGCCGTTTGGATACACGAGGAAGGATGTTCTCTTGATTGGAG  Raphanus raphanistrum subsp. maritimus
FD548417       --> CAAGAAGACGCCGTTTGGATACACTAGGAAGGATGTTCTCTTGATTGGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY922248       --> CAAGAAGACGCCGTTTGGATACACGAGGAAGGATGTTCTGTTGATAGGAG  Raphanus raphanistrum subsp. landra
EY948644       --> CAAGAAGACGCCGTTTGGATACACGAGGAAGGATGTTCTGTTGATAGGAG  Raphanus sativus cv Rat-Tail Radish #3870
EV526310       --> CAAGAAGACGCCGTTTGGATACACGAGGAAGGATGTTCTCTTGATTGGAG  Raphanus raphanistrum subsp. maritimus
EV535975       --> CAAGAAGACGCCGTTTGGATACACGAGGAAGGATGTTCTCTTGATAGGAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD555997       --> CAAGAAGACGCCGTTTGGATACACGAGGAAGGATGTTCTGTTGATAGGAG  Raphanus raphanistrum subsp. landra
FD533727       --> CAAGAAGACGCCGTTTGGATACACGAGGAAGGATGTTCTCTTGATTGGAG  Raphanus raphanistrum subsp. maritimus
EX890530       --> CAAGAAGACGCCGTTTGGATACACGAGGAAGGATGTTCTGTTGATAGGAG  Raphanus sativus var. oleiformis
EX886822       --> ..................................................  Raphanus sativus var. oleiformis
EW735703       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EW736008       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870

               351    -    401
UN13807        --> TGGGAGTGACTGCACTTGGTATCGGGCTAGAGAGTGGACTTGAGTATGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX893624       <-- TGGGAGTGACTGCACTTGGTATCGGGCTAGAGAGCGGACTTGAGTATGTG  Raphanus sativus var. oleiformis
FD544610       <-- TGGGAGTGACTGCACTTGGTATCGGGCTAGAGAGTGGCCTTGAGTATGTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW719444       <-- TGGGAGTGACTGCACTTGGTATGGGGCTAGAGAGCGGACTTGAGTATGTG  Raphanus sativus var. oleiformis
EV530822       <-- TGGGAGTGACTGCACTTGGTATCGGGCTAGAGAGTGGCCTTGAGTATGTG  Raphanus raphanistrum subsp. maritimus
EV540524       <-- TGGGAGTGACTGCACTCGGTATCGGGCTAGAGAGTGGTCTTGAGTATGTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD552375       <-- TGGGAGTGACTGCACTTGGTATCGGGCTAGAGAGCGGACTTGAGTATGTG  Raphanus raphanistrum subsp. landra
FD529839       <-- TGGGAGTGACTGCACTTGGTATCGGGCTAGAGAGTGGCCTTGAGTATGTG  Raphanus raphanistrum subsp. maritimus
EY918244       <-- TGGGAGTGACTGCACTTGGTATCGGGCTAGAGAGCGGACTTGAGTATGTG  Raphanus raphanistrum subsp. landra
EX891116       <-- TGGGAGTGACTGCACTTGGTATCGGGCTAGAGAGCGGACTTGAGTATGTG  Raphanus sativus var. oleiformis
EW731094       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD964993       --> TGGGAGTGACTGCACTTGGTATCGGGCTAGAGAGTGGCCTTGAGTATGTG  Raphanus raphanistrum subsp. maritimus
EX888334       --> ..................................................  Raphanus sativus var. oleiformis
EV528237       --> TGGGAGTGACTGCACTTGGTATCGGGCTAGAGAGTGGCCTTGAGTATGTG  Raphanus raphanistrum subsp. maritimus
FD548417       --> TGGGAGTGACTGCACTTGGTATCGGGCTAGAGAGTGGCCTTGAGTATGTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY922248       --> TGGGAGTGACTGCACTTGGTATCGGGCTAGAGAGCGGACTTGAGTATGTG  Raphanus raphanistrum subsp. landra
EY948644       --> TGGGAGTGACTGCACTTGG----GGGCTAGAGAGCGGACTTGAGTATGTG  Raphanus sativus cv Rat-Tail Radish #3870
EV526310       --> TGGGAGTGACTGCACTTGGTATCGGGCTAGAGAGTGGCCTTGAGTATGTG  Raphanus raphanistrum subsp. maritimus
EV535975       --> TGGGAGTGACTGCACTCGGTATCGGGCTAGAGAGTGGTCTTGAGTATGTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD555997       --> TGGGAGTGACTGCACTTGGTATCGGGCTAGAGAGCGGACTTGAGTATGTG  Raphanus raphanistrum subsp. landra
FD533727       --> TGGGAGTGACTGCACTTGGTATCGGGCTAGAGAGTGGCCTTGAGTATGTG  Raphanus raphanistrum subsp. maritimus
EX890530       --> TGGGAGTGACTGCACTTGGTATCGGGCTAGAGAGCGGACTTGAGTATGTG  Raphanus sativus var. oleiformis
EX886822       --> ..................................................  Raphanus sativus var. oleiformis
EW735703       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EW736008       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870

               401    -    451
UN13807        --> GGAGTAGATCCTTTGCAAGCAGGTAATGCTGTACAGCTGATATTGGTGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX893624       <-- GGAGTAGATCCTTTACAAGCAGGTAATGCTGTACAGCTGATATTGGTGCT  Raphanus sativus var. oleiformis
FD544610       <-- GGAGTGGATCCTTTGCAAGCAGGTAATGCTGTACAGCTGATATTGGTGCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW719444       <-- GGAGTAGATCCTTTGCAAGCAGGTAATGCTGTACAGCTGATATTGGTGCT  Raphanus sativus var. oleiformis
EV530822       <-- GGAGTGGATCCTTTGCAAGCAGGTAATGCTGTACAGCTGATATTGGTGCT  Raphanus raphanistrum subsp. maritimus
EV540524       <-- GGAGTAGATCCTTTGCAAGCAGGTAATGCTGTACAGCTGATATTGGTGCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD552375       <-- GGAGTAGATCCTTTGCAAGCAGGTAATGCTGTACAGCTGATATTGGTGCT  Raphanus raphanistrum subsp. landra
FD529839       <-- GGAGTGGATCCTTTGCAAGCAGGTAATGCTGTACAGCTGATATTGGTGCT  Raphanus raphanistrum subsp. maritimus
EY918244       <-- GGAGTAGATCCTTTGCAAGCAGGTAATGCTGTACAGCTGATATTGGTGCT  Raphanus raphanistrum subsp. landra
EX891116       <-- GGAGTAGATCCTTTGCAAGCAGGTAATGCTGTACAGCTGATATTGGTGCT  Raphanus sativus var. oleiformis
EW731094       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD964993       --> GGAGTGGATCCTTTGCAAGCAGGTAATGCTGTACAGCTGATATTGGTGCT  Raphanus raphanistrum subsp. maritimus
EX888334       --> ..................................................  Raphanus sativus var. oleiformis
EV528237       --> GGAGTGGATCCTTTGCAAGCAGGTAATGCTGTACAGCTGATATTGGTGCT  Raphanus raphanistrum subsp. maritimus
FD548417       --> GGAGTGGATCCTTTGCAAGCAGGTAATGCTGTACAGCTGATATTGGTGCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY922248       --> GGAGTAGATCCTTTGCAAGCAGGTAATGCTGTACAGCTGATATTGGTGCT  Raphanus raphanistrum subsp. landra
EY948644       --> GGAGTAGATCCTTTGCAAGCAGGTAATGCTGTACGGCTGATATTGGTGCT  Raphanus sativus cv Rat-Tail Radish #3870
EV526310       --> GGAGT.............................................  Raphanus raphanistrum subsp. maritimus
EV535975       --> GGAGTAGATCCTTTGCAAGCAGGTAATGCTGTACAGCTGATATTGGTGCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD555997       --> GGAGTAGATCCTTTGCAAGCAGGTAATGCTGTACAGCTGATATTGGTGCT  Raphanus raphanistrum subsp. landra
FD533727       --> GGAGTGGATCCTTTGCAAGCAGGTAATGCTGTACAGCTGATATTGGTGCT  Raphanus raphanistrum subsp. maritimus
EX890530       --> GGAGTAGATCCTTTGCAAGCAGGTAATGCTGTACAGCTGATATTGGTGCT  Raphanus sativus var. oleiformis
EX886822       --> ...........TTTGCAAGCAGGTAATGCTGTACAGCTGATATTGGTGCT  Raphanus sativus var. oleiformis
EW735703       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EW736008       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870

               451    -    501
UN13807        --> AGGCTT-GACACTAGGTTGGATATCGACTT-ACATCTTTAGAGTCGGTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX893624       <-- AGGCTT-GACACTAGGTTGGATATCGACTT-ACATCTTTAGAGTCGGTAA
FD544610       <-- AGGCTT-GACACTAGGTTGGATATCGACTT-ACATCTTTAGAGTCGGTAA
EW719444       <-- AGGCTT-GACACTAGGTTGGATATCGACTT-ACATCTTTAGAGTCGGTAA
EV530822       <-- AGGCTT-GACACTAGGTTGGATATCGACTT-ACATCTTTAGAGTCGGTAA
EV540524       <-- AGGCTT-GACACTAGGTTGGATATCGACTT-ACATCTTTAGAGTCGGTAA
FD552375       <-- AGGCTT-GACACTAGGTTGGATATCGACTT-ACATCTTTAGAGTCGGTAA
FD529839       <-- AGGCTT-GACACTAGGTTGGATATCGACTT-ACATCTTTAGAGTCGGTAA
EY918244       <-- AGGCTT-GACACTAGGTTGGATATCGACTT-ACATCTTTAGAGTCGGTAA
EX891116       <-- AGGCTT-GACACTAGGTTGGATATCGACTT-ACATCTTTAGAGTCGGTAA
EW731094       <-- ..................................................
FD964993       --> AGGCTT-GACACTAGGTTGGATATCGACTT-ACATCTTTAGAGTCGGTAA
EX888334       --> ..................................................
EV528237       --> AGGCTT-GACACTAGGTTGGATATCGACTT-ACATCTTTAGAGTCGGTAA
FD548417       --> AGGCTT-GACACTAGGTTGGATATCGACTT-ACATCTTTAGAGTCGGTAA
EY922248       --> AGGCTT-GACACTAGGTTGGATATCGACTT-ACATCTTTAGAGTCGGTAA
EY948644       --> AGGCTT-GACACTAGGTTGGATATCGACTT-ACATCTTTAGAGTCGGTAA
EV526310       --> ..................................................
EV535975       --> AGGCTT-GACACTAGGTTGGATATCGACTT-ACATCTTTAGAGTCGGTAA
FD555997       --> AGGCTT-GACACTAGGTTGGATATCGACTT-ACATCTTTAGAGTCGGTAA
FD533727       --> AGGCTT-GACACTAGGTTGGATATCGACTT-ACATCTTTAGAGTCGGTAA
EX890530       --> AGGCTT-GACACTAGGTTGGATATCGACTT-ACATCTTTAGAGTCGGTAA
EX886822       --> AGGCTTTGACACTAGGTTGGATATCGACTTTACATCTTTAGAGTCGGTAA
EW735703       --> ..................................................
EW736008       --> ..................................................

               501    -    551
UN13807        --> CAAGGAGATGACTTATGCTCAGCAGCTTCGTGACTACGAGTCTCAAGTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX893624       <-- CAAGGAGATGACTTATGCTCAGCAGCTTCGTGACTACGAGTCTCAAGTCA
FD544610       <-- CAAGGAGATGACTTATGCTCAGCAGCTTCGTGACTACGAGTCTCAAGTCA
EW719444       <-- CAAGGAGATGACTTATGCTCAGCAGCTTCGTGACTACGAGTCTCAAGTCA
EV530822       <-- CAAGGAGATGACT-ATGCTCAGCAGCTTCGTGACTACGAGTCTCAAGTCA
EV540524       <-- CAAGGAGATGACTTATGCTCAGCAACTTCGTGACTACGAGTCACAAGTCA
FD552375       <-- CAAGGAAATGACTTATGCTCAGCAGCTTCGTGACTACGAGTCTCAAGTCA
FD529839       <-- CAAGGAGATGACTTATGCTCAGCAGCTTCGTGACTACGAGTCTCAAGTCA
EY918244       <-- CAAGGAAATGACTTATGCTCAGCAGCTTCGTGACTACGAGTCTCAAGTCA
EX891116       <-- CAAGGAGATGACTTATGCTCAGCAGCTTCGTGACTACGAGTCTCAAGTCA
EW731094       <-- ..................................................
FD964993       --> CAAGGAGATGACTTATGCTCAGCAGCTTCGTGACTACGAGTCTCAAGTCA
EX888334       --> ..................................................
EV528237       --> CAAGGAGATGGCTTATGCTCAGCAGCTTCGTGACTACGAGTCTCAAGTCA
FD548417       --> CAAGGAGATGACTTATGCTCAGCAGCTTCGTGACTACGAGTCTCAAGTCA
EY922248       --> CAAGGAAATGACTTATGCTCAGCAGCTTCGTGACTACGAGTCTCAAGTCA
EY948644       --> CAAGGAGATGACTTATGCTCAGCAGCTTCGTGACTACGAGTCTCAAGTCA
EV526310       --> ..................................................
EV535975       --> CAAGGAGATGACTTATGCTCAGCAACTTCGTGACTACGAGTCACAAGTCA
FD555997       --> CAAGGAAATGACTTATGCTCAGCAGCTTCGTGACTACGAGTCTCAAGTCA
FD533727       --> CAAGGAGATGACTTATGCTCAGCAGCTTCGTGACTACGAGTCTCAAGTCA
EX890530       --> CGAGGAGATGACTTATGCTCAGCAGCTTCGTGACTACGAGTCTCAAGTCA
EX886822       --> CAAGGAGATGACTTATGCTCAGCAGCTTCGTGACTACGAGTCTCAAGTCA
EW735703       --> ..................................................
EW736008       --> ..................................................

               551    -    601
UN13807        --> TGCAGAAACGGTTGGAGAGCTTATCTGAGGCGGAGTTAGAGGCGTTGATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX893624       <-- TGCAGAAACGGTTGGAGAGCTTATTTGAGGCGGAGTTAGAGGCGTTGATG  Raphanus sativus var. oleiformis
FD544610       <-- TGCAGAAACGGTTGGAGAGCTTATCTGAGGCCGAGTTAGAGGCGTTGATG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW719444       <-- TGCAGAAACGGTTGGAGAGCTTATTTGAGGCGGAGTTAGAGGCGTTGATG  Raphanus sativus var. oleiformis
EV530822       <-- TGCAGAAACGGTTGGAGAGCTTATTTGAGGCCGAGTTAGAGGCGTTGATG  Raphanus raphanistrum subsp. maritimus
EV540524       <-- TGCAGAAACGGTTGGAGAGCTTATCTGAGGCCGAGTTAGAGGCGTTGATG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD552375       <-- TGCAGAAACGGTTGGAGAGCTTATCTGAGGCGGAGTTAGAGGCGTTGATG  Raphanus raphanistrum subsp. landra
FD529839       <-- TGCAGAAACGGTTGGAGAGCTTATCTGAGGCCGAGTTAGAGGCGTTGATG  Raphanus raphanistrum subsp. maritimus
EY918244       <-- TGCAGAAACGGTTGGAGAGCTTATCTGAGGCGGAGTTAGAGGCGTTGATG  Raphanus raphanistrum subsp. landra
EX891116       <-- TGCAGAAACGGTTGGAGAGCTTATCTGAGGCGGAGTTAGAGGCGTTGATG  Raphanus sativus var. oleiformis
EW731094       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD964993       --> TGCAGAAACGGTTGGAGAGCTTATCTGAGGCCGAGTTAGAGGCGTTGATG  Raphanus raphanistrum subsp. maritimus
EX888334       --> ..................................................  Raphanus sativus var. oleiformis
EV528237       --> TGCAGAAACGGTTGGAGAGCTTATCTGAGGCCGAGTTAGAGGCGTCGATG  Raphanus raphanistrum subsp. maritimus
FD548417       --> TGCAGAAACGGTTGGAGAGCTTATCTGAGGCCGAGTTAGAGGCGTTGATG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY922248       --> TGCAGAAACGGTTGGAGAGCTTATCTGAGGCGGAGTTAGAGGCGTTGATG  Raphanus raphanistrum subsp. landra
EY948644       --> TGCAGAAACGGTTGGAGAGCTTATCTGAGGCGGAGTTAGAGGCGTTGATG  Raphanus sativus cv Rat-Tail Radish #3870
EV526310       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV535975       --> TGCAGAAACGGTTGGAGAGCTTATCTGAGGCCGAGTTAGAGGCGTTGATG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD555997       --> TGCAGAAACGGTTGGAGAGCTTATCTGAGGCGGAGTTAGAGGCGTTGATG  Raphanus raphanistrum subsp. landra
FD533727       --> TGCAGAAACGGTTGGAGAGCTTATCTGAGGCCGAGTTAGAGGCGTTGATG  Raphanus raphanistrum subsp. maritimus
EX890530       --> TGCAGAAACGGTTGGAGAGCTTATCTGAGGCGGAGTTAGAGGCGTTGATG  Raphanus sativus var. oleiformis
EX886822       --> TGCAGAAACGGTTGGAGAGCTTATCTGAGGCGGAGTTAGAGGCGTTGATG  Raphanus sativus var. oleiformis
EW735703       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EW736008       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870

               601    -    651
UN13807        --> GAACAAGTTGATGAAGAGAAGAGACAAGTTTAGTAGGCTTAGGCTCCTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX893624       <-- GAACAAGTTGATGAAGAGAAGAGACAAGTTTAGTAGGCTTAGGCTCCTCT
FD544610       <-- GAACAAGTTGATGAAGAGAAGAGACAAGTTTAGTGGGCTTAGGCTCCTCT
EW719444       <-- GAACAAGTTGATGAAGAGAAGAGACAAGTTTAGTAGGCTTAGGCTCCTCT
EV530822       <-- GAACAAGTTGATGAAGAGAAGAGACAAGTTTAGTAGGCTTAGGCTCCCCT
EV540524       <-- GAACAAGTTGATGAAGAGAAGAGACAAGTTTAGTAGGCTTAGGCTCCTCT
FD552375       <-- GAACAAGTTGATGAAGAGAAGAGACAAGTTTAGTAGGCTTAGGCTCCTCT
FD529839       <-- GAACAAGTTGATGAAGAGAAGAGACAAGTTTAGTAGGCTTAGGCTCCTCT
EY918244       <-- GAACAAGTTGATGAAGAGAAGAGACAAGTTTAGTAGGCTTAGGCTCCTCT
EX891116       <-- GAACAAGTTGATGAAGAGAAGAGACAAGTTTAGTAGGCTTAGGCTCCTCT
EW731094       <-- ..................................................
FD964993       --> GAACAAGTTGATGAAGAGAAGAGACAAGTTTAGTAG-CTTAG-CTCCTCT
EX888334       --> ..................................................
EV528237       --> GAACAAGTTGATGAAGAGAAGAGACAAGTTTAGTAGGCTTAGGCTCCTCT
FD548417       --> GAACAAGTTGATGAAGAGAAGAGACAAGTTTAGTGGGCTTAG-CTCCTCT
EY922248       --> GAACAAGTTGATGAAGAGAAGAGACAAGTTTAGTAGGCTTAGGCTCCTCT
EY948644       --> GAACAAGTTGATGAAGAGAAGAGACAAGTTTAGTAGGCTTAGGCTCCTCT
EV526310       --> ..................................................
EV535975       --> GAACAAGTTGATGAAGAGAAGAGACAAGTTTAGTAGGCTTAGGCTCCTCT
FD555997       --> GAACAAGTTGATGAAGAGAAGAGACAAGTTTA..................
FD533727       --> GAACAAGTTGATGAAGAGAAGAGACAAGTTTAGTAGGCTTAGGCTCCTCT
EX890530       --> GAACAAGTTGATGAAGAGAAGAGACAAGTTTAGTAGGCTTAGGCTCCTCT
EX886822       --> GAACAAGTTGATGAAGAGAAGAGACAAGTTTAGTAGGCTTAGGCTCCTCT
EW735703       --> ..................................................
EW736008       --> ..................................................

               651    -    701
UN13807        --> ACTGTTCCGTTCACCTGCAAAATTAGTAAAAGAATCACAGGCAGGTTTT-
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX893624       <-- ACTGTTCCGTTCACCTGCAAAATTAGTAAAAGAATCACAGGCAGGTTTT-  Raphanus sativus var. oleiformis
FD544610       <-- ACTGTTCCGTTCACCTGCAAAATTAGTAAAAGAATCACAGGCAGGTTTT-  Raphanus raphanistrum subsp. raphanistrum (NY)
EW719444       <-- ACTGTTCCGTTCACCTGCAAAATTAGTAAAAGAATCACAGGCAGGTTTT-  Raphanus sativus var. oleiformis
EV530822       <-- ACTGTTCCGTTCACCTGCAAAATTAGTAAAAGAATCACAGGCAGGTTTT-  Raphanus raphanistrum subsp. maritimus
EV540524       <-- ACTGTTCCGTTCACCTGCAAAATTAGTAAAAGAATCACAGGAAGGTTTT-  Raphanus raphanistrum subsp. raphanistrum (MS)
FD552375       <-- ACTGTTCCGTTCACCTGCAAAATTAGTAAAAGAATCACAGGCAGGTTTT-  Raphanus raphanistrum subsp. landra
FD529839       <-- ACTGTTCCGTTCACCTGCAAAATTAGTAAAAGAATCACAGGCAGGTTTT-  Raphanus raphanistrum subsp. maritimus
EY918244       <-- ACTGTTCCGTTCACCTGCAAAATTAGTAAAAGAATCACAGGCAGGTTTT-  Raphanus raphanistrum subsp. landra
EX891116       <-- ACTGTTCCGTTCACCTGCAAAATTAGTAAA....................  Raphanus sativus var. oleiformis
EW731094       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD964993       --> ACTGTTCCGTTCACCTGCAAA-TTAGTAAAAGA-TCACAa..........  Raphanus raphanistrum subsp. maritimus
EX888334       --> ..................................................  Raphanus sativus var. oleiformis
EV528237       --> ACTGTTCCGTTCACCTGCAAAATTAGTAAAAGAATCACAGGCAGGTTTT-  Raphanus raphanistrum subsp. maritimus
FD548417       --> ACTGTTCCGTTCACCTGCAAAATTAGTAAAAGAATC..............  Raphanus raphanistrum subsp. raphanistrum (NY)
EY922248       --> ACTGTTCCGTTCACCTGCAAA-TTAGTAAAAGAAT...............  Raphanus raphanistrum subsp. landra
EY948644       --> ACTGTTCCGTTCACCTGCAAAATTAGTAAAAGAATCACAGGTAGGTTTT-  Raphanus sativus cv Rat-Tail Radish #3870
EV526310       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV535975       --> ACTGTTCCGTTCACCTGCAAAATTAGTAAAAGAATCACAGGAAGGTTTT-  Raphanus raphanistrum subsp. raphanistrum (MS)
FD555997       --> ..................................................  Raphanus raphanistrum subsp. landra
FD533727       --> ACTGTTCCGTTCACCTGCAAAATTAGTAAAAGAATCACAGGCAGGTTTT-  Raphanus raphanistrum subsp. maritimus
EX890530       --> ACTGTTCCGTTCACCTGCAAAATTAGTAAAAGAATCACAGGCAGGTTTT-  Raphanus sativus var. oleiformis
EX886822       --> ACTGTTCCGTTCACCTGCAAAATTAGTAAAAGAATCACAGGCAGGTTTTT  Raphanus sativus var. oleiformis
EW735703       --> ...........................................GGTTTT-  Raphanus sativus cv Rat-Tail Radish #3870
EW736008       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870

               701    -    751
UN13807        --> AATGTTGGTTCTTGTCCCTCAATGTTGGTTGTATGATACACAAAAGAATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX893624       <-- AATGTTGGTTCTTGTCCCTCAATGTTGGTTGTATGATACACAAAAGAATA  Raphanus sativus var. oleiformis
FD544610       <-- CATGTTGGTTCTTGTTCCTCAATGTTGGTTGTATGATACAAAAAAGAATA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW719444       <-- AATGTTGGTTCTTGTCCCTCAATGTTGGTTGTATGATACACAAAA.....  Raphanus sativus var. oleiformis
EV530822       <-- CATGTTGGTTCTTGTTCCTCAATGTTGGTTGTATGATACAAAAAAGAATA  Raphanus raphanistrum subsp. maritimus
EV540524       <-- AATGTTGGTTCTTGTCCCTCAATGTTGGTTGTATGATACACAAAA.....  Raphanus raphanistrum subsp. raphanistrum (MS)
FD552375       <-- AATGTTGGTTCTTGTCCCTCAATGTTGGTTGTATGATACACAAAA.....  Raphanus raphanistrum subsp. landra
FD529839       <-- CATGTTGGTTCTTGTTCCTCAATGTTGGTTGTATGATACAAAAAAGAATA  Raphanus raphanistrum subsp. maritimus
EY918244       <-- AATGTTGGTTCTTGTCCCTCAATGTTGGTTGTATGATACACAAAAGAATA  Raphanus raphanistrum subsp. landra
EX891116       <-- ..................................................  Raphanus sativus var. oleiformis
EW731094       <-- .......GTTCTTGTCCCTCAATGTTGGTTGTATGATACACAAAAGAATA  Raphanus sativus cv Rat-Tail Radish #3870
FD964993       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX888334       --> ..................................................  Raphanus sativus var. oleiformis
EV528237       --> CATGTTGGTTCTTGTTCCTCAATGTTGGTTGTATGATACAAAAAAGAATA  Raphanus raphanistrum subsp. maritimus
FD548417       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY922248       --> ..................................................  Raphanus raphanistrum subsp. landra
EY948644       --> AATGTTGGTTCT......................................  Raphanus sativus cv Rat-Tail Radish #3870
EV526310       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV535975       --> AATGTTGGTTCTTGTCCCTCAATGTTGGTTGTATGATACACAAAA.....  Raphanus raphanistrum subsp. raphanistrum (MS)
FD555997       --> ..................................................  Raphanus raphanistrum subsp. landra
FD533727       --> CATGTTGGTTCTTGTTCCTCAATGTTGGTTGTATGATACAAAAAA.....  Raphanus raphanistrum subsp. maritimus
EX890530       --> AATGTTGGTTCTTGTCCCTCAATGTTGGTTGTATGATACACAAAA.....  Raphanus sativus var. oleiformis
EX886822       --> AATGTTGGTTCTTGTCCCTCAATGTTGGTTGTATGATACACAAAA.....  Raphanus sativus var. oleiformis
EW735703       --> AATGTTGGTTCTTGTCCCTCAATGTTGGTTGTATGATACACAAAAGAATA  Raphanus sativus cv Rat-Tail Radish #3870
EW736008       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870

               751    -    801
UN13807        --> CAAATCAAAGAATATGTTGAAACGGTTGAAGGAATCTATCAATCAGGCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX893624       <-- CAAATCAAAGAATATGTTGAAACGGTTG......................
FD544610       <-- CAAATCAAAGAATATGTTGAAACGGTTGAAGGAATCTATC..........
EW719444       <-- ..................................................
EV530822       <-- CAAATCAAAGAATATGTTGAAACGGTTGAAGG..................
EV540524       <-- ..................................................
FD552375       <-- ..................................................
FD529839       <-- CAAATCAAAGAATATGTTGAAACGGTTGAAGG..................
EY918244       <-- CAAATCAAAGAATATGTTGAAACGGTTGAAGGAATCTATC..........
EX891116       <-- ..................................................
EW731094       <-- CAAATCAAAGAATATGTTGAAACGGTTGAAGGAATCTATCAATCAGGCTC
FD964993       --> ..................................................
EX888334       --> ..................................................
EV528237       --> CAAATCAAAGAATATGTTGAAACGGTTGAAGGA-TCTATCAATCAGACTC
FD548417       --> ..................................................
EY922248       --> ..................................................
EY948644       --> ..................................................
EV526310       --> ..................................................
EV535975       --> ..................................................
FD555997       --> ..................................................
FD533727       --> ..................................................
EX890530       --> ..................................................
EX886822       --> ..................................................
EW735703       --> CAAATCAAAGAATATGTTGAAACGGTTGAAGGAATCTATCAATCAGGCTC
EW736008       --> .............ATGTTGAAACGGTTGAAGGAATCTATCAATCAGGCTC

               801    -    851
UN13807        --> GCTCAGAGCACGTCACAATACCCTCAAGGGCTTTATACAAGATGAATCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX893624       <-- ..................................................
FD544610       <-- ..................................................
EW719444       <-- ..................................................
EV530822       <-- ..................................................
EV540524       <-- ..................................................
FD552375       <-- ..................................................
FD529839       <-- ..................................................
EY918244       <-- ..................................................
EX891116       <-- ..................................................
EW731094       <-- GCTCAGAGCACGTCACAATACCCTCAAGGGCTTTATACAAGATGAATCAA
FD964993       --> ..................................................
EX888334       --> ..................................................
EV528237       --> GCTCAGAGCACGTC....................................
FD548417       --> ..................................................
EY922248       --> ..................................................
EY948644       --> ..................................................
EV526310       --> ..................................................
EV535975       --> ..................................................
FD555997       --> ..................................................
FD533727       --> ..................................................
EX890530       --> ..................................................
EX886822       --> ..................................................
EW735703       --> GCTCAGAGCACGTCACAATACCCTCAAGGGCTTTATACAAGATGAATCAA
EW736008       --> GCTCAGAGCACGTCACAATACCCTCAAGGGCTTTATACAAGATGAATCAA

               851    -    901
UN13807        --> AAACACATGGGAACAAACTGAATCAAATGAATATGAAGTTATGAACATTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX893624       <-- ..................................................
FD544610       <-- ..................................................
EW719444       <-- ..................................................
EV530822       <-- ..................................................
EV540524       <-- ..................................................
FD552375       <-- ..................................................
FD529839       <-- ..................................................
EY918244       <-- ..................................................
EX891116       <-- ..................................................
EW731094       <-- AAACACATGGGAACAAACTGAATCAAATGAATATGAAGTTATGAACATTA
FD964993       --> ..................................................
EX888334       --> ..................................................
EV528237       --> ..................................................
FD548417       --> ..................................................
EY922248       --> ..................................................
EY948644       --> ..................................................
EV526310       --> ..................................................
EV535975       --> ..................................................
FD555997       --> ..................................................
FD533727       --> ..................................................
EX890530       --> ..................................................
EX886822       --> ..................................................
EW735703       --> AAACACATGGGAACAAACTGAATCAAATGAATATGAAGTTATGAACATTA
EW736008       --> AAACACATGGGAACAAACTGAATCAAATGAATATGAAGTTATGAACATTA

               901    -    951
UN13807        --> TGTGAGTATGCACGAGGAGAAATTTTCTCTCCTAAGAAGGAACTTTTGCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX893624       <-- ..................................................
FD544610       <-- ..................................................
EW719444       <-- ..................................................
EV530822       <-- ..................................................
EV540524       <-- ..................................................
FD552375       <-- ..................................................
FD529839       <-- ..................................................
EY918244       <-- ..................................................
EX891116       <-- ..................................................
EW731094       <-- TGTGAGTATGCACGAGGAGAAATTTTCTCTCCTAAGAAGGAACTTTTGCG
FD964993       --> ..................................................
EX888334       --> ..................................................
EV528237       --> ..................................................
FD548417       --> ..................................................
EY922248       --> ..................................................
EY948644       --> ..................................................
EV526310       --> ..................................................
EV535975       --> ..................................................
FD555997       --> ..................................................
FD533727       --> ..................................................
EX890530       --> ..................................................
EX886822       --> ..................................................
EW735703       --> TGTGAGTATGCACGAGGAGAAATTTTCTCTCCTAAGAAGGAACTTTTGCG
EW736008       --> TGTGAGTATGCACGAGGAGAAATTTTCTCTCCTAAGAAGGAACTTTTGCG

               951    -   1001
UN13807        --> ACTTATATCTAACCCAAATGCCTTACGAGCAACGGGAGTACTGGTGAATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX893624       <-- ..................................................
FD544610       <-- ..................................................
EW719444       <-- ..................................................
EV530822       <-- ..................................................
EV540524       <-- ..................................................
FD552375       <-- ..................................................
FD529839       <-- ..................................................
EY918244       <-- ..................................................
EX891116       <-- ..................................................
EW731094       <-- ACTTATATCTAACCCAAATGCCTTACGAGCAACGGGAGTACTGGTGAATC
FD964993       --> ..................................................
EX888334       --> ..................................................
EV528237       --> ..................................................
FD548417       --> ..................................................
EY922248       --> ..................................................
EY948644       --> ..................................................
EV526310       --> ..................................................
EV535975       --> ..................................................
FD555997       --> ..................................................
FD533727       --> ..................................................
EX890530       --> ..................................................
EX886822       --> ..................................................
EW735703       --> ACTTATATCTAACCCAAATGCCTTACGAGCAACGGGAGTACTGGTGAATC
EW736008       --> ACTTATATCTAACCCAAATGCCTTACGAGCAACGGGAGTACTGGTGAATC

               1001   -   1051
UN13807        --> CGGGTGAAGTGCTCTGACTAGAAACACAAATTTGAGTACACACTCGATGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX893624       <-- ..................................................
FD544610       <-- ..................................................
EW719444       <-- ..................................................
EV530822       <-- ..................................................
EV540524       <-- ..................................................
FD552375       <-- ..................................................
FD529839       <-- ..................................................
EY918244       <-- ..................................................
EX891116       <-- ..................................................
EW731094       <-- CGGGTGAAGTGCTCTGACTAGAAACACAAATTTGAGTACACACTCGATGC
FD964993       --> ..................................................
EX888334       --> ..................................................
EV528237       --> ..................................................
FD548417       --> ..................................................
EY922248       --> ..................................................
EY948644       --> ..................................................
EV526310       --> ..................................................
EV535975       --> ..................................................
FD555997       --> ..................................................
FD533727       --> ..................................................
EX890530       --> ..................................................
EX886822       --> ..................................................
EW735703       --> CGGGTGAAGTGCTCTGACTAGAAACACAAATTTGAGTACACACTCGATGC
EW736008       --> CGGGTGAAGTGCTCTGACTAGAAACACAAATTTGAGTACACACTCGATGC

               1051   -   1101
UN13807        --> TGAATAATTTGAACTTCCATGTTGCTGAAGTCGCTGGTCTGTTTGGTCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX893624       <-- ..................................................
FD544610       <-- ..................................................
EW719444       <-- ..................................................
EV530822       <-- ..................................................
EV540524       <-- ..................................................
FD552375       <-- ..................................................
FD529839       <-- ..................................................
EY918244       <-- ..................................................
EX891116       <-- ..................................................
EW731094       <-- TGAATAATTTGAACTTCCATGTTGCTGAAGTCGCTGGTCTGTTTGGTCTG
FD964993       --> ..................................................
EX888334       --> ..................................................
EV528237       --> ..................................................
FD548417       --> ..................................................
EY922248       --> ..................................................
EY948644       --> ..................................................
EV526310       --> ..................................................
EV535975       --> ..................................................
FD555997       --> ..................................................
FD533727       --> ..................................................
EX890530       --> ..................................................
EX886822       --> ..................................................
EW735703       --> TGAATAATTTGAACTTCCATGTTGCTGAAGTCGCTGGTCTGTTTGGTCTG
EW736008       --> TGAATAATTTGAACTTCCATGTTGCTGAAGTCGCTGGTCTGTTTGGTCTG

               1101   -   1151
UN13807        --> GCTTGATATGTGGAATTCTTCTGCTTGATCTTCAGTGACAGGCATGGACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX893624       <-- ..................................................
FD544610       <-- ..................................................
EW719444       <-- ..................................................
EV530822       <-- ..................................................
EV540524       <-- ..................................................
FD552375       <-- ..................................................
FD529839       <-- ..................................................
EY918244       <-- ..................................................
EX891116       <-- ..................................................
EW731094       <-- GCTTGATATGTGGAATTCTTCTGCTTGATCTTCAGTGACAGGCATGGACT
FD964993       --> ..................................................
EX888334       --> ..................................................
EV528237       --> ..................................................
FD548417       --> ..................................................
EY922248       --> ..................................................
EY948644       --> ..................................................
EV526310       --> ..................................................
EV535975       --> ..................................................
FD555997       --> ..................................................
FD533727       --> ..................................................
EX890530       --> ..................................................
EX886822       --> ..................................................
EW735703       --> GCTTGATATGTGGAATTCTTCTGCTTGATCTTCAGTGACAGGCATGGACT
EW736008       --> GCTTGATATGTGGAATTCTTCTGCTTGATCTTCAGTGACAGGCATGGACT

               1151   -   1201
UN13807        --> TCCTCGAGATTCAATAGCCATCTCAACAATGTCGGAAATGGAACAGCTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX893624       <-- ..................................................
FD544610       <-- ..................................................
EW719444       <-- ..................................................
EV530822       <-- ..................................................
EV540524       <-- ..................................................
FD552375       <-- ..................................................
FD529839       <-- ..................................................
EY918244       <-- ..................................................
EX891116       <-- ..................................................
EW731094       <-- TCCTCGAGATTCAATAGCCATCTCAACAATGTCGGAGATGGAACAGCTCG
FD964993       --> ..................................................
EX888334       --> ..................................................
EV528237       --> ..................................................
FD548417       --> ..................................................
EY922248       --> ..................................................
EY948644       --> ..................................................
EV526310       --> ..................................................
EV535975       --> ..................................................
FD555997       --> ..................................................
FD533727       --> ..................................................
EX890530       --> ..................................................
EX886822       --> ..................................................
EW735703       --> TCCTCGAGATTCAATAGCCATCTCAACAATGTCGGAAATGGAACAGCTCG
EW736008       --> TCCTCGAGATTCAATAGCCATCTCAACAATGTCGGAAATGGAACAGCTCG

               1201   -   1251
UN13807        --> AGTCAAGCGAGAAATATGGAGCAGAAGAATCTTTCGTTGGCAGAGAACTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX893624       <-- ..................................................
FD544610       <-- ..................................................
EW719444       <-- ..................................................
EV530822       <-- ..................................................
EV540524       <-- ..................................................
FD552375       <-- ..................................................
FD529839       <-- ..................................................
EY918244       <-- ..................................................
EX891116       <-- ..................................................
EW731094       <-- AGTCAAGCGAGAAATATGGAGCAGAAGAATCTTTCGTTGGCAGAGAACTC
FD964993       --> ..................................................
EX888334       --> ..................................................
EV528237       --> ..................................................
FD548417       --> ..................................................
EY922248       --> ..................................................
EY948644       --> ..................................................
EV526310       --> ..................................................
EV535975       --> ..................................................
FD555997       --> ..................................................
FD533727       --> ..................................................
EX890530       --> ..................................................
EX886822       --> ..................................................
EW735703       --> AGTCAAGCGAGAAATATGGAGCAGAAGAATCTTTCGTTGGCAGAAAACTC
EW736008       --> AGTCAAGCGAGAAATATGGAGCAGAAGAATCTTTCGTTGGCAGAGAACTC

               1251   -   1301
UN13807        --> AGCAGGCTGAAGTCTTCAATGCATATGAAAAGATGTCCATCTACCACAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX893624       <-- ..................................................
FD544610       <-- ..................................................
EW719444       <-- ..................................................
EV530822       <-- ..................................................
EV540524       <-- ..................................................
FD552375       <-- ..................................................
FD529839       <-- ..................................................
EY918244       <-- ..................................................
EX891116       <-- ..................................................
EW731094       <-- AGCAGGCTGAAGTCTTCAATGCATATGAAAAGATGTCCATCTACCACAAA
FD964993       --> ..................................................
EX888334       --> ..................................................
EV528237       --> ..................................................
FD548417       --> ..................................................
EY922248       --> ..................................................
EY948644       --> ..................................................
EV526310       --> ..................................................
EV535975       --> ..................................................
FD555997       --> ..................................................
FD533727       --> ..................................................
EX890530       --> ..................................................
EX886822       --> ..................................................
EW735703       --> AGCAGGCTGAAGTCTTCAATGCATATGAAAAGATGTCCATCTACCACAAA
EW736008       --> AGCAGGCTGAAGTCTTCAATGCATATGAAAAGATGTCCATCTACCACAAA

               1301   -   1351
UN13807        --> TAGTGATCGTGGACGCCATGACACCTCTCCAAGAGTGCTGCTCTGAAACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX893624       <-- ..................................................
FD544610       <-- ..................................................
EW719444       <-- ..................................................
EV530822       <-- ..................................................
EV540524       <-- ..................................................
FD552375       <-- ..................................................
FD529839       <-- ..................................................
EY918244       <-- ..................................................
EX891116       <-- ..................................................
EW731094       <-- TAGTGATCGTGGACGCCATGACACCTCTCCAAGAGTGCTGCTCTGAAACT
FD964993       --> ..................................................
EX888334       --> ..................................................
EV528237       --> ..................................................
FD548417       --> ..................................................
EY922248       --> ..................................................
EY948644       --> ..................................................
EV526310       --> ..................................................
EV535975       --> ..................................................
FD555997       --> ..................................................
FD533727       --> ..................................................
EX890530       --> ..................................................
EX886822       --> ..................................................
EW735703       --> TAGTGATCGTGGACGCCATGACACCTCTCCAAGAGTGCTGCTCTGAAACT
EW736008       --> TAGTGATCGTGGACGCCATGACACCTCTCCAAGAGTGCTGCTCTGAAACT

               1351   -   1401
UN13807        --> GGAGAACACTATACTGGAATATAGTCAGCTTCAAACCACCACATATTTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX893624       <-- ..................................................
FD544610       <-- ..................................................
EW719444       <-- ..................................................
EV530822       <-- ..................................................
EV540524       <-- ..................................................
FD552375       <-- ..................................................
FD529839       <-- ..................................................
EY918244       <-- ..................................................
EX891116       <-- ..................................................
EW731094       <-- GGAGAACACTATACTGGAATATAGTCAGCTTCAAACCACCACATATTTCT
FD964993       --> ..................................................
EX888334       --> ..................................................
EV528237       --> ..................................................
FD548417       --> ..................................................
EY922248       --> ..................................................
EY948644       --> ..................................................
EV526310       --> ..................................................
EV535975       --> ..................................................
FD555997       --> ..................................................
FD533727       --> ..................................................
EX890530       --> ..................................................
EX886822       --> ..................................................
EW735703       --> GGAGAACACTATACTGGAATATAGTCAGCTTCAAACCACCACATATTTCT
EW736008       --> GGAGAACACTATACTGGAATATAGTCAGCTTCAAACCACCACATATTTCT

               1401   -   1451
UN13807        --> TTCTCAAACATTTCCATTTGTATATTTTCCAAACTTCCCAAAGAACATTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX893624       <-- ..................................................
FD544610       <-- ..................................................
EW719444       <-- ..................................................
EV530822       <-- ..................................................
EV540524       <-- ..................................................
FD552375       <-- ..................................................
FD529839       <-- ..................................................
EY918244       <-- ..................................................
EX891116       <-- ..................................................
EW731094       <-- TTCTCAAACATTTCCATTTGTATATTTTCCAAACTTCCCAAAGAACATTT
FD964993       --> ..................................................
EX888334       --> ..................................................
EV528237       --> ..................................................
FD548417       --> ..................................................
EY922248       --> ..................................................
EY948644       --> ..................................................
EV526310       --> ..................................................
EV535975       --> ..................................................
FD555997       --> ..................................................
FD533727       --> ..................................................
EX890530       --> ..................................................
EX886822       --> ..................................................
EW735703       --> TTCTCAAACATTTCCATTTGTATATTTTCCAAACTTCCCAAAGAACATTT
EW736008       --> TTCTCAAACATTTCCATTTGTATATTTTCCAAACTTCCCAAAGAACATTT

               1451   -   1501
UN13807        --> AGGTTCCGTAGCTTGAGAACCCAAGACTTTAATGATATTGAGTAAAACTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX893624       <-- ..................................................
FD544610       <-- ..................................................
EW719444       <-- ..................................................
EV530822       <-- ..................................................
EV540524       <-- ..................................................
FD552375       <-- ..................................................
FD529839       <-- ..................................................
EY918244       <-- ..................................................
EX891116       <-- ..................................................
EW731094       <-- AGGTTCCGTAGCTTGAGAACCCAAGACTTTAATGATATTGAGTAAAACTC
FD964993       --> ..................................................
EX888334       --> ..................................................
EV528237       --> ..................................................
FD548417       --> ..................................................
EY922248       --> ..................................................
EY948644       --> ..................................................
EV526310       --> ..................................................
EV535975       --> ..................................................
FD555997       --> ..................................................
FD533727       --> ..................................................
EX890530       --> ..................................................
EX886822       --> ..................................................
EW735703       --> AGGTTCCGTAGCTTGAGAACCCAAGACTTTAATGATATTGAGTAAAACTC
EW736008       --> AGGTTCCGTAGCTTGAGAACCCAAGACTTTAATGATATTGAGTAAAACTC