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Alignment for radish unigene UN13850

               1      -     51
UN13850        --> ACCTAGATTTTTAGATTTTTACTTCTACCACTATCACTGAAACCATTTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX762090       <-- ..................................................
FD970493       <-- ..................................................
EX895795       <-- ..................................................
FD981866       <-- ..................................................
EX896365       <-- ..................................................
EV566443       <-- ..................................................
FY451114       <-- ..................................................
FY432843       <-- ..................................................
EX895181       <-- ..................................................
EY946335       <-- ..................................................
EV538021       <-- ..................................................
EY924289       <-- ..................................................
FD578669       <-- ..................................................
FD975876       --> ACCTAGATTTTTAGATTTTTACTTCTACCACTATCACTGAAACCATTTAA
EV542125       --> ..................................................
FD966840       --> ..................................................
FD942098       --> ..................................................
EV571572       --> ..................................................
EX899272       --> ..................................................
EY942452       --> ..................................................
EV541431       --> ..................................................
EV543314       --> ..................................................
EV543661       --> ..................................................
EX768491       --> ..................................................
FD977545       --> ..................................................
FY444867       --> ..................................................

               51     -    101
UN13850        --> ATAAAAGGAAACCAGATACAAAACTAGCATACACCATATGCTCAAACATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX762090       <-- ..................................................
FD970493       <-- ..................................................
EX895795       <-- ..................................................
FD981866       <-- ..................................................
EX896365       <-- ..................................................
EV566443       <-- ..................................................
FY451114       <-- ..................................................
FY432843       <-- ..................................................
EX895181       <-- ..................................................
EY946335       <-- ..................................................
EV538021       <-- ..................................................
EY924289       <-- ..................................................
FD578669       <-- ..................................................
FD975876       --> ATAAAAGGAAACCAGATACAAAACTAGCATACACCATATGCTCAAACATC
EV542125       --> .......................................GCTCAAACATC
FD966840       --> ..........................................CAAACATC
FD942098       --> ..................................................
EV571572       --> ..................................................
EX899272       --> ..................................................
EY942452       --> ..................................................
EV541431       --> ..................................................
EV543314       --> ..................................................
EV543661       --> ..................................................
EX768491       --> ..................................................
FD977545       --> ..................................................
FY444867       --> ..................................................

               101    -    151
UN13850        --> AAAGTATATTTAAAATATGGTTTTATTTGATCTTATTACCGGGTAACACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX762090       <-- .........gattAATATGGTTT-ATTTGATCTTATTACCGGGTAACACT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD970493       <-- .....................................ACCGGGTAACACT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX895795       <-- ......................................CCGGGTAACACT  Raphanus sativus cv Early Scarlet Globe
FD981866       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX896365       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV566443       <-- ..................................................  Raphanus raphanistrum subsp. landra
FY451114       <-- ..................................................  Raphanus sativus cv GSK3-1
FY432843       <-- ..................................................  Raphanus sativus cv GSK3-1
EX895181       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY946335       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV538021       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY924289       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD578669       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD975876       --> AAAGTATATGATTAATATGGTTTTATTTGATCTTATTACCGGGTAACACT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV542125       --> AAAGTATATGATTAATATGGTTTTATTTGATCTTATTACCGGGTAACACT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD966840       --> AAAGTATATGATTAATATGGTTTTATTTGATCTTATTACCGGGTAACACT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD942098       --> ......cgTTTAAAGTATGGTTTTATTTGATCTTATTACCGGGTAACACT  Raphanus sativus cv Early Scarlet Globe
EV571572       --> ....ggtgaTTAAAATATGGTTTTATTTGATCTTATTACCGGGTAACACT  Raphanus raphanistrum subsp. landra
EX899272       --> .......ggTTAAAGTATGGTTTTATTTGATCTTATTACCGGGTAACACT  Raphanus sativus cv Early Scarlet Globe
EY942452       --> .......gcTTAAAATATGGTTTTATTTGATCTTATTACCGGGTAACACT  Raphanus sativus cv Rat-Tail Radish #3870
EV541431       --> ..........attAATATGGTTTTATTTGATCTTATTACCGGGTAACACT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV543314       --> .......gtgattAATATGGTTTTATTTGATCTTATTACCGGGTAACACT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV543661       --> .......gtgattAATATGGTTTTATTTGATCTTATTACCGGGTAACACT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX768491       --> .........ggttAATATGGTTTTATTTGATCTTATTACCGGGTAACACT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD977545       --> ........................ATTTGATCTTATTACCGGGTAACACT  Raphanus raphanistrum subsp. raphanistrum (NY)
FY444867       --> ..........................TTGATCTTATTACCGGGTAACACT  Raphanus sativus cv GSK3-1

               151    -    201
UN13850        --> GAGTTCAAATGTCAGAAAGAGATAAAAGCAAAAAAAAAAA--CAAGGCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX762090       <-- GAGTTCAAATGTCAGAAAGAGATAAAAGCAAAAAAAAAA---CAAGGCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD970493       <-- GAGTTCAAATGTCAGAAAGAGATAAAAGCAAAAAAAAAAA-ACAAGGCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX895795       <-- GGGTTCAAATGTCAGAAAGAGATAAA-GCAAAAAA---AA--CAAGGCTT  Raphanus sativus cv Early Scarlet Globe
FD981866       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX896365       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV566443       <-- ..................................................  Raphanus raphanistrum subsp. landra
FY451114       <-- ..................................................  Raphanus sativus cv GSK3-1
FY432843       <-- ..................................................  Raphanus sativus cv GSK3-1
EX895181       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY946335       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV538021       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY924289       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD578669       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD975876       --> GAGTTCAAATGTCAGAAAGAGATAAAAGCAAAAAAAAA----CAAGGCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV542125       --> GAGTTCAAATGTCAGAAAGAGATAAAAGCAACAAAAAA----CAAGGCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD966840       --> GAGTTCAAATGTCAGAAAGAGATAAAAGCAAAAAAAAAAA-ACAAGGCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD942098       --> GGGTTCAAATGTCAGAAAGAGATAAAAGCAAAAAAAAAAA--CAAGGCTT  Raphanus sativus cv Early Scarlet Globe
EV571572       --> GGGTTCAAATGTCAGAAAGAGATAAAAGCAAAAAAAAAAAAACAAGGCTT  Raphanus raphanistrum subsp. landra
EX899272       --> GGGTTCAAATGTCAGAAAGAGATAAAAGCAAAAAAAAAA---CAAGGCTT  Raphanus sativus cv Early Scarlet Globe
EY942452       --> GGGTTCAAATGTCAGAAAGAGATAAAAGCAAAAAAAAAAAAACAAGGCTT  Raphanus sativus cv Rat-Tail Radish #3870
EV541431       --> GAGTTCAAATGTCAGAAAGAGATAAAAGCAAAAAAAAAA---CAAGGCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV543314       --> GAGTTCAAATGTCAGAAAGAGATAAAAGCAAAAAAAAAAA--CAAGGCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV543661       --> GAGTTCAAATGTCAGAAAGAGATAAAAGCAAAAAAAAA----CAAGGCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX768491       --> GAGTTCAAATGTCAGAAAGAGATAAAAGCAAAAAAAAAAA-ACAAGGCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD977545       --> GAGTTCAAATGTCAGAAAGAGATAAAAGCAAAAAAAAA----CAAGACTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FY444867       --> GGGTTCAAATGTCAGAAAGAGATAAAAGCAAAAAAAAAAAAACAAGGCTT  Raphanus sativus cv GSK3-1

               201    -    251
UN13850        --> TTACAGCTCGTCCTTTGCGGCCGATTCCCCAGTCTTATGTTCTCCACTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX762090       <-- TTACAGCTCGTCCTTTGCGGCCGATTCCCCAGTCTTATGTTCTCCACTCC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD970493       <-- TTACAGCTCGTCCTTTGCGGCCGATTCCCCAGTCTTATGTTCTCCACTCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX895795       <-- TTACAGCTCGTCCTTTGCGGCCGATTC-TCAGTCTTATGTTCTCCACTCC  Raphanus sativus cv Early Scarlet Globe
FD981866       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX896365       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV566443       <-- ..................................................  Raphanus raphanistrum subsp. landra
FY451114       <-- ..................................................  Raphanus sativus cv GSK3-1
FY432843       <-- ..................................................  Raphanus sativus cv GSK3-1
EX895181       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY946335       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV538021       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY924289       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD578669       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD975876       --> TTACAGCTCGTCCTTTGCGGCCGATTCCCCAGTCTTATGTTCTCCACTCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV542125       --> TTACAGCTCGTCCTTTGCGGCCGATTCCCCAGTCTTATGTTCTCCACTCC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD966840       --> TTACAGCTCGTCCTTTGCGGCCGATTCCCCAGTCTTATGTTCTCCACTCC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD942098       --> TTACAGCTCGTCCTTTGCGGCCGATTCCTCAGTCTTATGTTCTCCACTCC  Raphanus sativus cv Early Scarlet Globe
EV571572       --> TTACAGCTCGTCCTTTGCGGCCGATTCCTCAGTCTTATGTTCTCCACTCC  Raphanus raphanistrum subsp. landra
EX899272       --> TTACAGCTCGTCCTTTGCGGCCGATTCCTCAGTCTTATGTTCTCCACTCC  Raphanus sativus cv Early Scarlet Globe
EY942452       --> TTACAGCTCGTCCTTTGCGGCCGATTCCTCAGTCTTATGTTCTCCACTCC  Raphanus sativus cv Rat-Tail Radish #3870
EV541431       --> TTACAGCTCGTCCTTTGCGGCCGATTCCCCAGTCTTATGTTCTCCACTCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV543314       --> TTACAGCTCGTCCTTTGCGGCCGATTCCCCAGTCTTATGTTCTCCACTCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV543661       --> TTACAGCTCGTCCTTTGCGGCCGATTCCCCAGTCTTATGTTCTCCACTCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX768491       --> TTACAGCTCGTCCTTTGAGGCCGATTCCCCAGTCTTATGTTCTCCACTCC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD977545       --> TTACAGCTCGTCCTTTGCGGCCGATTCCCCGGTCTTATGTTCTCCACTCC  Raphanus raphanistrum subsp. raphanistrum (NY)
FY444867       --> TTACAGCTCGTCCTTTGCGGCCGATTCCTCAGTCTTATGTTCTCCACTCC  Raphanus sativus cv GSK3-1

               251    -    301
UN13850        --> TAACAGTAGTAGAAGACTCTTCACGATGAGAAGCTGGCTTGTTCTTCTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX762090       <-- TAACAGTAGTAGAAGACTCTTCACGATGAGAAGCTGGCTTGTTCTTCTCA
FD970493       <-- TAACAGTAGTAGAAGACTCTTCACGATGAGAAGCTGGCTTGTTCTTCTCA
EX895795       <-- TAACAGTAGTAGAAGACTCTTCACGATGAGAAGCTGGCTTGTTCTTCTCA
FD981866       <-- ..................................................
EX896365       <-- ..................................................
EV566443       <-- ..................................................
FY451114       <-- ..................................................
FY432843       <-- ..................................................
EX895181       <-- ..................................................
EY946335       <-- ..................................................
EV538021       <-- ..................................................
EY924289       <-- ..................................................
FD578669       <-- ..................................................
FD975876       --> TAACAGTAGTAGAAGACTCTTCACGATGAGAAGCTGGCTTGTTCTTCTCA
EV542125       --> TAACAGTAGTAGAAGACTCTTCACGATGAGAAGCTGGCTTGTTCTTCTCA
FD966840       --> TAACAGTAGTAAAAAACTCTTCACGATGAAAAGCTGGCTTGTTCTTCTCA
FD942098       --> TAACAGTAGTAGAAGACTCTTCACGATGAGAAGCTGGCTTGTTCTTCTCA
EV571572       --> TAACAGTAGTAGAAGACTCTTCACGATGAGAAGCTGGCTTGTTCTTCTCA
EX899272       --> TAACAGTAGTAGAAGACTCTTCACGATGAGAAGCTGGCTTGTTCTTCTCA
EY942452       --> TAACAGTAGTAGAAGACTCTTCACGATGAGAAGCTGGCTTGTTCTTCTCA
EV541431       --> TAACAGTAGTAGAAGACTCTTCACGATGAGAAGCTGGCTTGTTCTTCTCA
EV543314       --> TAACAGTAGTAGAAGACTCTTCACGATGAGAAGCTGGCTTGTTCTTCTCA
EV543661       --> TAACAGTAGTAGAAGACTCTTCACGATGAGAAGCTGATTTGTTCTTCTCA
EX768491       --> TAACAGTAGTAGAAGACTCTTCACGATGAGAAGCTGGCTTGTTCTTCTCA
FD977545       --> TAACAGTAGTAGAAGACTCTTCACGATGAGAAGCTGGCTTGTTCTTCTCA
FY444867       --> TAACAGTAGTAGAAGACTCTTCACGATGAGAAACTGGCTTGTTCTTCTCA

               301    -    351
UN13850        --> ACGAAGCTTATGAAGTCTTCCTTTGTCCTGCTTCCATCGTACAATACAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX762090       <-- ACGAAGCTTATGAAGTCTTCCTTTGTTCTGCTTCCATCGTACAATACAAC
FD970493       <-- ACGAAGCTTATGAAGTCTTCCTTTGTCCTGCTTCCATCGTACAATACAAC
EX895795       <-- ACGAAGCTTATGAAGTCTTCCTTTGTCCTGCTTCCATCGTACAATACAAC
FD981866       <-- ..................................................
EX896365       <-- ..................................................
EV566443       <-- ..................................................
FY451114       <-- ..................................................
FY432843       <-- ..................................................
EX895181       <-- ..................................................
EY946335       <-- ..................................................
EV538021       <-- ..................................................
EY924289       <-- ..................................................
FD578669       <-- ..................................................
FD975876       --> ACGAAGCTTATGAAGTCTTCCTTTGTCCTGCTTCCATCGTACAATACAAC
EV542125       --> ACGAAGCTTATGAAGTCTTCCTTTGTCCTGCTTCCATCGTACAATACAAC
FD966840       --> ACGAAGCTTATGAAGTCTTCCTTTGTCCTGCTTCCATCGTACAATACAAC
FD942098       --> ACGAAGCTTATGAAGTCTTCCTTTGTCCTGCTTCCATCGTACAATACAAC
EV571572       --> ACGAAGCTTATGAAGTCTTCCTTTGTCCTGCTTCCATCGTACAATACAAC
EX899272       --> ACGAAGCTTATGAAGTCTTCCTTTGTCCTGCTTCCATCGTACAATACAAC
EY942452       --> AAGAAGCTTATGAAGTCTTCCTTTGTTCTGCTTCCATCGTACAATACAAC
EV541431       --> ATGAAGCTTATGAAGTCTTCCTTTGTCCTGCTTCCATCGTACAATACAAC
EV543314       --> ACGAAGCTTATGAAGTCTTCCTTTGTCCTGCTTCCATCGTACAATACAAC
EV543661       --> ACGAAGCTTATGAAGTCTTCCTTTGTCCTGCTTCCATCGTACAATACAAC
EX768491       --> ACGAAGCTTATGAAGTCTTCCTTTGTTCTGCTTCCATCGTACAATACAAC
FD977545       --> ACGAAGCTTATGAAGTCTTCCTTTGTCCTGCTTCCATCGTACAATACAAC
FY444867       --> ACGAAGCTTATGAAGTCTTCCTTTGTCCTGCTTCCATCGTACAATACAAC

               351    -    401
UN13850        --> CTTTCCATCCGCTGATCTGAAGTAAATCGTTGGGAAGCCTTTCACATCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX762090       <-- CTTTCCATCCGCTGATCTGAAATAAATCGTTGGAAAGCCTTTCACATCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD970493       <-- CTTTCCATCCGCTGATCTGAAGTAAATTGTTGGGAAGCCTTTCACATCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX895795       <-- CTTTCCATCAGCTGATCTGAAGTAAATCGTTGGGAAGCCTTTCACATCAA  Raphanus sativus cv Early Scarlet Globe
FD981866       <-- .......TCCGCTGATCTGAAGTAAATTGTTGGGAAGC-TTTCACATCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX896365       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV566443       <-- ..................................................  Raphanus raphanistrum subsp. landra
FY451114       <-- ..................................................  Raphanus sativus cv GSK3-1
FY432843       <-- ..................................................  Raphanus sativus cv GSK3-1
EX895181       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY946335       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV538021       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY924289       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD578669       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD975876       --> CTTTCCATCCGCTGATCTGAAGTAAATTGTTGGG................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV542125       --> CTTTCCATCCGCTGATCTGAAATAAATCGTTGGGAAGCCTTTCACATCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD966840       --> CTTTCCATCCGCTGATCTGAAGTAAATTGTTGGGAAGCCTTTCACATCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD942098       --> CTTTCCATCAGCTGATCTGAAGTAAATCGTTGGGAAGCCTTTCACATCAA  Raphanus sativus cv Early Scarlet Globe
EV571572       --> CTTTCCATCAGCTGATCTGAAGTAAATCGTTGGGAAGCCTTTCACATCAA  Raphanus raphanistrum subsp. landra
EX899272       --> CTTTCCATCAGCTGATCTGAAGTAAATCGTTGGGAAGCCTTTCACATCAA  Raphanus sativus cv Early Scarlet Globe
EY942452       --> CTTTCCATCCGCTGATCTGAAATAAATCGTTGGGAAGCCTTTCACATCAA  Raphanus sativus cv Rat-Tail Radish #3870
EV541431       --> CTTTCCATCCGCTGATCTGAAGTAAATTGTTGGGAAGCCTTTCACATCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV543314       --> CTTTCCATCCGCTGATCTGAAGTAAATTGTTGGGAAGCCTTTCACATCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV543661       --> CTTTCCATCCGCTGATCTGAAGTAAATTGTTGGGAAGCCTTTCACATCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX768491       --> CTTTCCATCCGCTGATCTGAAATAAATCGTTGGAAAGCCTTTCACATCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD977545       --> CTTTCCATCCGCTGATCTGAAGTAAATTGTTGGGAAGCCTTTCACATCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FY444867       --> CTTTCCATCAGCTGATCTGAAGTAAATCGTTGGGAAGCCTTTCACATCAA  Raphanus sativus cv GSK3-1

               401    -    451
UN13850        --> AGGTATCGCTGGGGATATCATTTGCGGTTGCGTCTAGTTTTGCTACGATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX762090       <-- AGGTATCGCTTGGGATATCATTCGCGGTTGCGTCTAGTTTTGCTACGATG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD970493       <-- AGGTATCGCTGGGGATATCATTTGCGGTTGCGTCTAGTTTTGCTACGATG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX895795       <-- AGGTATCGCTTGGGATATCATTCGCGGTTGCGTCTAGTTTTGCTACGATG  Raphanus sativus cv Early Scarlet Globe
FD981866       <-- AGGTATCGCTGGGGATATCATTTGCGGTTGCGTCTAGTTTTGCTACGATG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX896365       <-- ......................................TTTGCTACGATG  Raphanus sativus cv Early Scarlet Globe
EV566443       <-- ..................................................  Raphanus raphanistrum subsp. landra
FY451114       <-- ..................................................  Raphanus sativus cv GSK3-1
FY432843       <-- ..................................................  Raphanus sativus cv GSK3-1
EX895181       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY946335       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV538021       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY924289       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD578669       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD975876       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV542125       --> AGGTATCGCTGGGGATATCATTTGCGGTTGCGTCTAGTTTTGCTACGATG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD966840       --> AGGTATCGCTGGGGATATCATTTGCGGTTGCGTCTAGTTTTGCTACGATG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD942098       --> AGGTATCGCTTGGGATATCATTCGCGGTTGCGTCTAGTTTTGCTACGATG  Raphanus sativus cv Early Scarlet Globe
EV571572       --> ATGTATCGCTGGGAATATCATTTGCGGTTGCGTCTAGTTTTGCTACGATG  Raphanus raphanistrum subsp. landra
EX899272       --> AGGTATCGCTTGGGATATCATTCGCGGTTGCGTCTAGTTTTGCTACGATG  Raphanus sativus cv Early Scarlet Globe
EY942452       --> ATGTATCGCTTGGGATATCATTCGCGGTTGCGTCTAGTTTTGCTACGATG  Raphanus sativus cv Rat-Tail Radish #3870
EV541431       --> AGGTATCGCTGGGGATATCATTTGCGGTTGCGTCTAGTTTTGCTACGATG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV543314       --> AGGTATCGCTGGGGATATCATTTGCGGTTGCGTCTAGTTTTGCTACGATG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV543661       --> AGGTATCGCTGGGGATATCATTTGCGGTTGCGTCTAGTTTTGCTACGATG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX768491       --> AGGTATCGCTTGGGATATCATTCGCGGTTGCGTCTAGTTTTGCTACGATG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD977545       --> AGGTATCGCTGGGGATATCATTTGCGGTTGCGTCTAGTTTTGCTACGATG  Raphanus raphanistrum subsp. raphanistrum (NY)
FY444867       --> ATGTATCGCTGGGGATATCATTTGCGGTTGCGTCTAGTTTTGCTACGATG  Raphanus sativus cv GSK3-1

               451    -    501
UN13850        --> ACACTTGGGTCGTTCTGGAACGACAAAGCCACTTCGTCCAAGATTGGGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX762090       <-- ACACTTGGGTCGTTCTGGAACGACAAAGCCACTTCGTCCAGGATTGGGGC
FD970493       <-- ACACTTGGGTCGTTCTGGAACGACAAAGCCACTTCGTCCAAGATTGGGGC
EX895795       <-- ACACTTGGGTCGTTCTGGAACGACAAAGCCACTTCGTCCAAGATTGGGGC
FD981866       <-- ACACTTGGGTCGTTCTGGAACGACAAAGCCACTTCGTCCAAGATTGGGGC
EX896365       <-- ACACTTGGGTCGT-CTGGAACGACAAAGCCACTTCGTCCAAGATTGGGGC
EV566443       <-- ..................................................
FY451114       <-- ..................................................
FY432843       <-- ..................................................
EX895181       <-- ..................................................
EY946335       <-- ..................................................
EV538021       <-- ..................................................
EY924289       <-- ..................................................
FD578669       <-- ..................................................
FD975876       --> ..................................................
EV542125       --> ACACTTGGGTCGTTCTGGAACGACAAAGCCACTTCGTCCAAGATTGGGGC
FD966840       --> ACACTTGGGTCGTTCTGGAACGACAAAGCCACTTCGTCCA..........
FD942098       --> ACACTTGGGTCGTTCTGGAACGACAAAGCCACTTCGTCCAAGATTGGGGC
EV571572       --> ACACTTGGGTCGTTCTGGAACGACAAAGCCACTTCGTCCAAGATTGGGGC
EX899272       --> ACACTTGGGTCGTTCTGGAACGACAAAGCCACTTCGTCCAAGATTGGGGC
EY942452       --> ACACTTGGGTCGTTCTGGAACGACAAAGCCACTTCGTCCAAGATTGGGGC
EV541431       --> ACACTTGGGTCGTTCTGGAACGACAAAGCCACTTCGTCCAAGATTGGGGC
EV543314       --> ACACTTGGGTCGTTCTGGAACGACAAAGCCACTTCGTCCAAGATTGGGGC
EV543661       --> ACACTTGGGTCGTTCTGGAACGACAAAGCCACTTCGTCCAAGATTGGGGC
EX768491       --> ACACTTGGGTCGTTCTGGAACGACAAAGCCACTTCGTCCAGGATTGGGGC
FD977545       --> ACACTTGGGTCGTTCTGGAACGACAAAGCCACTTCGTCCAAGATTGGGGC
FY444867       --> ACACTTGGGTCGTTCTGGAACGACAAAGCCACTTCGTCCAAGATTGGGGC

               501    -    551
UN13850        --> AAGTTTTTGGCAATGTCCACACCACGGTGCGTAGAATTCAATCAACACAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX762090       <-- AAGTTTTTGGCAGTGTCCACACCACGGTGCGTAGAATTCAATCAAGACAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD970493       <-- AAGTTTTTGGCAATGTCCACACCACGGTGCGTAGAATTCAATCAACACAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX895795       <-- AAGTTTTTGGCAATGTCCACACCACGGTGCGTAGAATTCAATCAGGACAT  Raphanus sativus cv Early Scarlet Globe
FD981866       <-- AAGTTTTTGGCAATGTCCACACCACGGTGCGTAGAATTCAATCAACACAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX896365       <-- AAGTTTTTGGCAATGTCCACACCACGGTGCGTAGAATTCAATCAGGACAT  Raphanus sativus cv Early Scarlet Globe
EV566443       <-- ......................CACGGTGCGTAGAATTCAATCAACACAT  Raphanus raphanistrum subsp. landra
FY451114       <-- ..................................................  Raphanus sativus cv GSK3-1
FY432843       <-- ..................................................  Raphanus sativus cv GSK3-1
EX895181       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY946335       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV538021       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY924289       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD578669       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD975876       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV542125       --> AAGTTTTTGGCAATGTCCACACCACGGTGCGTAGAATTCAATCAACACAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD966840       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD942098       --> AAGTTTTTGGCAATGTCCACACCACGGTGCGTAGAATTCAATCAGGACAT  Raphanus sativus cv Early Scarlet Globe
EV571572       --> AAGTTTTTGGCAATGTCCACACCACGGTGCGTAGAATTCAATCAACACAT  Raphanus raphanistrum subsp. landra
EX899272       --> AAGTTTTTGGCAATGTCCACACCACGGTGCGTAGAATTCAATCAGGACAT  Raphanus sativus cv Early Scarlet Globe
EY942452       --> AAGTTTTTGGCAATGTCCACACCACGGTGCGTAGAATTCAATCAACACAT  Raphanus sativus cv Rat-Tail Radish #3870
EV541431       --> AAGTTTTTGGCAATGTCCACACCACGGTGCGTAAAATTCAATCAACACAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV543314       --> AAGTTTTTGGCAATGTCCACACCACGGTGCGTAAAATTCAATCAACACAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV543661       --> AAGTTTTTGGCAATGTCCACACCACGGTGCGTAAAATTCAATCAACACAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX768491       --> AAGTTTTTGGCAGTGTCCACACCACGGTGCGTAGAATTCAATCAAGACAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD977545       --> AAGTTTTTGGCAATGTCCACACCACGGTGCGTAGAATTCAATCAACACAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FY444867       --> AAGTTTTTGGCAATGTCCACACCACGGTGCGTAGAATTCAATCAACACAT  Raphanus sativus cv GSK3-1

               551    -    601
UN13850        --> TCTTTCCAGAGTTGAAAACCATGTCGTCAAGGCTCTCAGCTACAACAACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX762090       <-- TCTTTCCAGAGTTGAAAACCATGTCGTCAAGGCTCTCAGCTACAACAACC
FD970493       <-- TCTTTCCAGAGTTGAAAACCATGTCGTCAAGGCTCTCAGCTACAACAACC
EX895795       <-- TCTTTCCAGAGTTGAAAACCATGTCGTCAAGGCTCTCAGCTACAACAACC
FD981866       <-- TCTTTCCAGAGTTGAAAACCATGTCGTCAAGGCTCTCAGCTACAACAACC
EX896365       <-- TCTTTCCAGAGTTGAAAACCATGTCGTCAAGGCTCTCAGCTACAACAACC
EV566443       <-- TCTTTCCAGAGTTGAAAACCATGTCGTCAAGGCTCTCAGCTACAACA-CC
FY451114       <-- ..................................................
FY432843       <-- ..................................................
EX895181       <-- ..................................................
EY946335       <-- ..................................................
EV538021       <-- ..................................................
EY924289       <-- ..................................................
FD578669       <-- ..................................................
FD975876       --> ..................................................
EV542125       --> TCTTTCCAGAGTTGAAAACCATGTCGTCAAGGCTCTCAGCTACAACAACC
FD966840       --> ..................................................
FD942098       --> TCTTTCCAGAGTTGAAAACCATGTCGTCAAGGCTCTCAGCTACAACAACC
EV571572       --> TCTTTCCAGAGTTGAAAACCATGTCGTCAAGGCTCTCAGCTACAACAACC
EX899272       --> TCTTTCCAGAGTTGAAAACCATGTCGTCAAGGCTCTCAGCTACAACAACC
EY942452       --> TCTTTCCAGAGTTGAAAACCATGTCGTCAAGGCTCTCAGCTACAACAACC
EV541431       --> TCTTTCCAGAGTTGAAAACCATGTCGTCAAGGCTCTCAGCTACAACAACC
EV543314       --> TCTTTCCAGAGTTGAAAACCATGTCGTCAAGGCTCTCAGCTACAACAACC
EV543661       --> TCTTTCCAGAGTTGAAAACCATGTCGTCAAGGCTCTCAGCTACAACAACC
EX768491       --> TCTTTCCAGAGTTGAAAACCATGTCGTCAAGGCTCTCAGCTACAACAACC
FD977545       --> TCTTTCCAGAGTTGAAAACCATGTCGTCAAGGCTCTCAGCTACAACAACC
FY444867       --> TCTTTCCAGAGTTGAAAACCATGTCGTCAAGGCTCTCAGCTACAACAACC

               601    -    651
UN13850        --> TTCACTGGCTCGTTGTTTTCAGCTGGGATAGGCTGAGATTTTTTGTGGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX762090       <-- TTCACTGGCTCGTTGTTTTCAGCTGGGATAGGCTGAGATTTTT-GTGGGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD970493       <-- TTCACTGGCTCGTTGTTTTCAGCTGGAATAGGCTGAGATTTTTTGTGGGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX895795       <-- TTCACTGGCTCGTTGTTTTCAGCTGGGATAGGCTGAGATTTTTTGTGGGC  Raphanus sativus cv Early Scarlet Globe
FD981866       <-- TTCAATGGCTCGTTGTTTTCAGCTGGAATAGGCTGAGATTTTTTGTGGGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX896365       <-- TTCACTGGCTCGTTGTTTTCAGCTGGGATAGGCTGAGATTTTTTGTGGGC  Raphanus sativus cv Early Scarlet Globe
EV566443       <-- TTCACTGGCTCGTTGTTTTCAGCTGGGATAGGCTGAGATTTTTTGTGGGC  Raphanus raphanistrum subsp. landra
FY451114       <-- ..................................................  Raphanus sativus cv GSK3-1
FY432843       <-- ..................................................  Raphanus sativus cv GSK3-1
EX895181       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY946335       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV538021       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY924289       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD578669       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD975876       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV542125       --> TTCACTGGCTCGTTGTTTTCAGCTGGAATAGGCTGAGATTTTTTGTGGGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD966840       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD942098       --> TTCACTGGCTCGTTGTTTTCAGCTGGGATAGGCTGAAATTTTTTGTGGGC  Raphanus sativus cv Early Scarlet Globe
EV571572       --> TTCACTGGCTCGTTGTTTTCAGCTGGGATAGGCTGAGATTTTTTGTGGGC  Raphanus raphanistrum subsp. landra
EX899272       --> TTCACTGGCTCGTTGTTTTCAGCTGGGATAGGCTGAAATTTTTTGTGGGC  Raphanus sativus cv Early Scarlet Globe
EY942452       --> TTCACTGGCTCGTTGTTTTCAGCTGGGATAGGCTGAGATTTTTTGTGGGC  Raphanus sativus cv Rat-Tail Radish #3870
EV541431       --> TTCACTGGCTCGTTGTTTTCAGCTGGAATAGGCTGAGATTTTTTGTGGGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV543314       --> TTCACTGGCTCGTTGTTTTCAGCTGGAATAGGCTGAGATTTTTTGTGGGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV543661       --> TTCACTGGCTCGTTGTTTTCAGCTGGAATAGGCTGAAATTTTTTGTGGGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX768491       --> TTCACTGGCTCGTTGTTTTCAGCTGGGATAGGCTGAGATTTTTTGTGGGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD977545       --> TTCAATGGCTCGTTGTTTTCAGCTGGAATAGGCTGAGATTTTTTGTGGGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FY444867       --> TTCACTGGCTCGTTGTTTTCAGCTGGGATAGGCTGAGATTTTTTGTGGGC  Raphanus sativus cv GSK3-1

               651    -    701
UN13850        --> GGCAACTTTCCCGTCCTTGAAGTCCTTCATCCATGATTCAATCTGGTCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX762090       <-- GGCAACTTTCCCGTCCTTGAAGTCCTTCATCCATGAATCAATCTGGTCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD970493       <-- GGCAACTTTCCCGTCCTTGAAGTCCTTCATCCATGAATCAATCTGGTC..  Raphanus raphanistrum subsp. raphanistrum (MS)
EX895795       <-- GGCAACTTTCCCGTCCTTGAAGTCCTTCATCCATGATTCAATCTGGTCAA  Raphanus sativus cv Early Scarlet Globe
FD981866       <-- GGCAACTTTCCCGTCCTTGAAGTCCTTCATCCATGAATCAATCTGGTCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX896365       <-- GGCAACTTTCCCGTCCTTGAAGTCCTTCATCCATGATTCAATCTGGTCAA  Raphanus sativus cv Early Scarlet Globe
EV566443       <-- GGCAACTTTCCCGTCCTTGAAGTCCTTCATCCATGATTCAATCTGGTCAA  Raphanus raphanistrum subsp. landra
FY451114       <-- .....................GTCCTTCATCCATGATTCAATCTGGTCAA  Raphanus sativus cv GSK3-1
FY432843       <-- ..................................................  Raphanus sativus cv GSK3-1
EX895181       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY946335       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV538021       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY924289       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD578669       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD975876       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV542125       --> GGCAACTTTCCCGTCCTTGAAGTCCTTCATCCATGAATCAATCTGGTCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD966840       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD942098       --> GGCAACTTTCCCGTCCTTGAAGTCCTTCATCCATGATTCAATCTGGTCAA  Raphanus sativus cv Early Scarlet Globe
EV571572       --> GGCAACTTTCCCGTCCTTGAAGTCCTTCATCCATGATTCAATCTGGTCAA  Raphanus raphanistrum subsp. landra
EX899272       --> GGCAACTTTCCCGTCCTTGAAGTCCTTCATCCATGATTCAATCTGGTCAA  Raphanus sativus cv Early Scarlet Globe
EY942452       --> GGCAACTTTCCCGTCCTTGAAGTCCTTCATCCATGATTCAATCTGGTCAA  Raphanus sativus cv Rat-Tail Radish #3870
EV541431       --> GGCAACTTTCCCGTCCTTGAAGTCCTTCATCCATGAATCAATCTGGTCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV543314       --> GGCAACTTTCCCGTCCTTGAAGTCCTTCATCCATGAATCAATCTGGTCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV543661       --> GGCAACTTTCCCGTCCTTGAAGTCCTTCATCCATGAATCAATCTGGTCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX768491       --> GGCAACTTTCCCGTCCTTGAAGTCCTTCATCCATGAATCAATCTGGTCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD977545       --> GGCAACTTTCCCGTCCTTGAAGTCCTTCATCCATGAATCAATCTGGTCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FY444867       --> GGCAACTTTCCCGTCCTTGAAGTCCTTCATCCATGATTCAATCTGGTCAA  Raphanus sativus cv GSK3-1

               701    -    751
UN13850        --> CCACAACGTTTGCTTTCAAATACTTCTTGCTGTCAGGAGTCTGGATGATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX762090       <-- CCACAACGTTTGCTTTCAAATACTTCTTGTTGTCAGGAGTCTGGATGATG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD970493       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX895795       <-- CCACAACGTTTGCTTTCAAATACTTCTTGCTGTCAGGAGTCTGGATGATG  Raphanus sativus cv Early Scarlet Globe
FD981866       <-- CCACAACGTTTGCTTTCAAATACTTCTTGCTGTCAGGAGTCTGGATAATG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX896365       <-- CCACAACGTT--TTTTCAAATACTTCTTGCTGTCAGGAGTCTGGATGATG  Raphanus sativus cv Early Scarlet Globe
EV566443       <-- CCACAACGTTTGCTTTCAAATACTTCTTGCTGTCAGGAGTCTGGATGATG  Raphanus raphanistrum subsp. landra
FY451114       <-- CCACAACGTTTGCTTTCAAATACTTCTTGCTGTCAGGAGTCTGGATGATG  Raphanus sativus cv GSK3-1
FY432843       <-- ..................................................  Raphanus sativus cv GSK3-1
EX895181       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY946335       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV538021       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY924289       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD578669       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD975876       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV542125       --> CCACAACGTTTGCTTTCAAATACTTCTTGCTGTCAGGAGTCTGGATAATG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD966840       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD942098       --> CCACAACGTTTGCTTTCAAATACTTCTTGCGGTCAGGAGTCTGGATGATG  Raphanus sativus cv Early Scarlet Globe
EV571572       --> CCACAACGTTTGCTTTCAAATACTTCTTGCTGTCAGGAGTCTGGATGATG  Raphanus raphanistrum subsp. landra
EX899272       --> CCACAACGTTTGCTTTCAAATACTTCTTGCTGTCAGGAGTCTGGATGATG  Raphanus sativus cv Early Scarlet Globe
EY942452       --> CCACAACGTTTGCTTTCAAATACTTCTTGCTGTCAGGAGTCTGGATGATG  Raphanus sativus cv Rat-Tail Radish #3870
EV541431       --> CCACAACGTTTGCTTTCAAATACTTCTTGCTGTCAGGAGTCTGGATAATG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV543314       --> CGACAACGTTTGCTTTCAAATACTTCTTGCTGTCAGGAGTCTGGATACTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV543661       --> CCACAACGTTTGCTTCCAAATACTTCTTGCTGTCAGGAGTCTGGATAATG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX768491       --> CCACAACGTTTGCTTTCAAATACTTCTTGCTGTCAGGAGTCTGGATGATG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD977545       --> CCACAACGTTTGCTTTCAAATACTTCTTGCTGTCAGGAGTCTGGATAATG  Raphanus raphanistrum subsp. raphanistrum (NY)
FY444867       --> CCACAACGTTTGCTTTCAAATACTTCTTGCTGTCAGGAGTCTGGATGATG  Raphanus sativus cv GSK3-1

               751    -    801
UN13850        --> ATGAGGGGAACTTGGCTCTCTTCGAGTCCAAAGTACTGCAAAGCGCCTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX762090       <-- ATGAGTGGAACTTGGCTCTCTTCGAGTCCAAAGTACTGCAAAGCGCCTTG
FD970493       <-- ..................................................
EX895795       <-- ATGAGGGGAACTTGGCTCTCTTCGAGTCCAAAGTACTGCAAAGCGCCTTG
FD981866       <-- ATGAGGGGAACTTGGCTCTCTTCGAGTCCAAAGTACTGCAAAGCGCCTTG
EX896365       <-- ATGAGGGGAACTTGGCTCTATTCGAGTCCAAAGTACTGCAAAGCGCCTTG
EV566443       <-- ATGAGGGGAACTTGGCTCTCTTCGAGTCCAAAGTACTGCAAAGCGCCTTG
FY451114       <-- ATGAGGGGAACTTGGCTCTCTTCGAGTCCAAAGTACTGCAAAGCGCCTTG
FY432843       <-- ..................................................
EX895181       <-- ..................................................
EY946335       <-- ..................................................
EV538021       <-- ..................................................
EY924289       <-- ..................................................
FD578669       <-- ..................................................
FD975876       --> ..................................................
EV542125       --> ATGAGGGGAACTTGGCTCTCTTCGAGTCCAAAGTACTGCAAAGCGCCTTG
FD966840       --> ..................................................
FD942098       --> ATGAGGGGAACTTGGCTCTCTTCGAGTCCAAAGTACTGCAAAGCGCCTTG
EV571572       --> ATGAGGGGAACTTGGCTCTCTTCGAGTCCAAAGTACTGCAAAGCGCCTTG
EX899272       --> ATGAGGGGAACTTGGCTCTCTTCGAGTCCGAAGTACTGCAAAGCGCCTTG
EY942452       --> ATGAGGGGAACTTGGCTCTCTTCGAGTCCAAAGTACTGCAAAGCGCCTTG
EV541431       --> ATGGGGGGAACTTGGCTCTCTTCGAGTCCAAAGTACTGCAAAGCGCCTTG
EV543314       --> ATGAGGGGAACTTGGCTCTCTTCGAGTCCAAAGTACTGCAAAGCGCCTTG
EV543661       --> ATGAGGGGAACTTGGCTCTCTTCGAGTCCAAAGTACTGCAAAGCGCCTTG
EX768491       --> ATGAGTGGAACTTGGCTCTCTTCGAG........................
FD977545       --> ATGAGGGGAACTTGGCTCTCTTCGAGTCCAAAGTACTGCAAAGCGCCTTG
FY444867       --> ATGAGGGGAACTTGGCTCTCTTCGAGTCCAAAGTACTGCAAAGCGCCTTG

               801    -    851
UN13850        --> GCTGTTCTCGGCATCACCAACAAGGAAGGCAAGATCTTGTCCTTTGTAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX762090       <-- GCTGTTCTCGGCATCACCAACGAGGAAGACAAGATCTTCTCCTTTGTAGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD970493       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX895795       <-- GCTGTTCTCGGCATCACCAACAAGGAAGGCAAGATCTTGTCCTTTGTAGG  Raphanus sativus cv Early Scarlet Globe
FD981866       <-- GCTGTTCTCGGCATCACCAACAAGGAAGGCAAGATCTTGTCCTTTGTAGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX896365       <-- GCTGTTCTCGGCATCACCAACAAGGAAGGCAAGATCTTGTCCTTTGTAGG  Raphanus sativus cv Early Scarlet Globe
EV566443       <-- GCTGTTCTCGGCATCACCAACAAGGAAGGCAAGATCTTTTCCTTTGTAGG  Raphanus raphanistrum subsp. landra
FY451114       <-- GCTGTTCTCGGCATCACCAACAAGGAAGGCAAGATCTTTTCCTTTGTAGG  Raphanus sativus cv GSK3-1
FY432843       <-- ..................................................  Raphanus sativus cv GSK3-1
EX895181       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY946335       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV538021       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY924289       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD578669       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD975876       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV542125       --> GCTGTTCTCGGCA.....................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD966840       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD942098       --> GCTGTTCTCGGCATCACCAACAAGGAAGGCAAGATCTTGTCCTTTGTAGG  Raphanus sativus cv Early Scarlet Globe
EV571572       --> GCTGTTCTCGGCATCACCAACAAGGAAGGCAAGATCTTTTCCTTTGTAGG  Raphanus raphanistrum subsp. landra
EX899272       --> GCTGTTCTCGGCATCACCAACAAGGAAGGCAAGATCTTGTC.........  Raphanus sativus cv Early Scarlet Globe
EY942452       --> GCT...............................................  Raphanus sativus cv Rat-Tail Radish #3870
EV541431       --> GCTGTTCTCGGCATCACCAACAAGGAAGGCAAGATCTTGTCCTTTGTAGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV543314       --> GCT...............................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV543661       --> GCTGTTCTCGGCATCACCAACAAGGAAGGCAAGACCTTGTCCTTTGTA..  Raphanus raphanistrum subsp. raphanistrum (NY)
EX768491       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD977545       --> GCTGTTCTCGGCATCACCAACAAGGAAGGCAAGATCTTGTCCTTTGTAGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FY444867       --> GCTGTTCTCGGCATCACCAACAAGGAAGGCAAGATCTTTTCCTTTGTAGG  Raphanus sativus cv GSK3-1

               851    -    901
UN13850        --> ATGTAGCAATTTCACGGAACTTTGATTTTAGAGATTCGGCTGTTTCTCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX762090       <-- Aag...............................................
FD970493       <-- ..................................................
EX895795       <-- AAGTAGCAATTTCACGGAACTTTGATTTCAGAGc................
FD981866       <-- ATGTAGCAATTTCACGGAACTTTGATTTTAGAGATTCGGCTGTTTCTCCA
EX896365       <-- AAGTAGCAATTTCACGGAACTTTGATTTCAGAGATTCAGCTGTTTCTCCA
EV566443       <-- ATGTAGCAATTTCACGGAACTTTGATTTTAGAGACTCGGCTGTTTCTCCA
FY451114       <-- ATGTAGCAATTTCACGGAACTTTGATTTTAGAGATTCGGCTGTTTCTCCA
FY432843       <-- ...................................TCGGCTGTTTCTCCA
EX895181       <-- ..................................................
EY946335       <-- ..................................................
EV538021       <-- ..................................................
EY924289       <-- ..................................................
FD578669       <-- ..................................................
FD975876       --> ..................................................
EV542125       --> ..................................................
FD966840       --> ..................................................
FD942098       --> AAGTAGCAATTTCACGGAACTTTGATTTCAGAGAT...............
EV571572       --> ATGTAGCAATTTCACGGAACTTTGATTTTAGAGACTCGGCTGTTTCTCCA
EX899272       --> ..................................................
EY942452       --> ..................................................
EV541431       --> ATGTAGCAATT.......................................
EV543314       --> ..................................................
EV543661       --> ..................................................
EX768491       --> ..................................................
FD977545       --> ATGTAGCAATTTCACGGAACTTTGATTTTAGAGATTCGGCTGTTTC....
FY444867       --> ATGTAGCAATTTCACGGAACTTTGATTTTAGAGATTCGGCTGTTTCTCCA

               901    -    951
UN13850        --> GTGAAGTTAACGAACATCATTACCTTAGTGGCAGGGCTGTCGAAGAATTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX762090       <-- ..................................................
FD970493       <-- ..................................................
EX895795       <-- ..................................................
FD981866       <-- GTGAAGTTAACGAACATCATTACCTTAGTGGCAGTGCTGTCAAAGAATTT
EX896365       <-- GTGAAGTTAACGAACATCATTACCTTAGTGGCAGGGCTGTCGAAGAATTT
EV566443       <-- GTGAAGTTAACGAACATCATTACCTTAGTGGCAGGGCTGTCGAAGAATTT
FY451114       <-- GTGAAGTTAACGAACATCATTACCTTAGTGGCAGGGCTGTCGAAGAATTT
FY432843       <-- GTGAAGTAAACGAACATCATTACCTTAGTGGCAGGGCTGTCGAAGAATTT
EX895181       <-- ..............................GCAGGGCTGTCGAAGAATTT
EY946335       <-- ..................................................
EV538021       <-- ..................................................
EY924289       <-- ..................................................
FD578669       <-- ..................................................
FD975876       --> ..................................................
EV542125       --> ..................................................
FD966840       --> ..................................................
FD942098       --> ..................................................
EV571572       --> GTGA..............................................
EX899272       --> ..................................................
EY942452       --> ..................................................
EV541431       --> ..................................................
EV543314       --> ..................................................
EV543661       --> ..................................................
EX768491       --> ..................................................
FD977545       --> ..................................................
FY444867       --> GTGAAGTTAACGAACATCATTACCTTAGTGGCAGGGCTGTCGAAGAATTT

               951    -   1001
UN13850        --> GGCAACATATGGGTGGTTGCTTGGATCTTTGTCAAAGACGGTAACAAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX762090       <-- ..................................................
FD970493       <-- ..................................................
EX895795       <-- ..................................................
FD981866       <-- GGCAACATATGGGTGGTTGCTTGGATCTTTGTCAAAGACGGTAACAAGAG
EX896365       <-- GGCAACATATGGGTGGTTGCTTGGATCTTTGTCAAAGACGGTAACAAGAG
EV566443       <-- GGCAACATATGGGTGGTTGCTTGGATCTTTGTCAAAGACGGTAACAAGAG
FY451114       <-- GGCAACATATGGGTGGTTGCTTGGATCTTTGTCAAAGACGGTAACAAGAG
FY432843       <-- GGCAACATATGGGTGGTTGCTTGGATCTTTGTCAAAGACGGTAACAAGAG
EX895181       <-- GGCAACATATGGGTGGTTGCTTGGATCTT-GTCAAAGACGGTAACAAGAG
EY946335       <-- ..................................................
EV538021       <-- ..................................................
EY924289       <-- ..................................................
FD578669       <-- ..................................................
FD975876       --> ..................................................
EV542125       --> ..................................................
FD966840       --> ..................................................
FD942098       --> ..................................................
EV571572       --> ..................................................
EX899272       --> ..................................................
EY942452       --> ..................................................
EV541431       --> ..................................................
EV543314       --> ..................................................
EV543661       --> ..................................................
EX768491       --> ..................................................
FD977545       --> ..................................................
FY444867       --> GGCAACATATGGGTGGTTGCTTGGATCTTTGTCAAAGACGGTAACAAGAG

               1001   -   1051
UN13850        --> GAATGCTTGATTCTTTGACAAACTTCTCCAGAGCTTCCCCATTGAAATCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX762090       <-- ..................................................
FD970493       <-- ..................................................
EX895795       <-- ..................................................
FD981866       <-- GAATGCTTGATTCTTTG.................................
EX896365       <-- GAATGCTTGATTCTTTGACAAACTTCTCCAGAGCTTCCCCATTGAAATCC
EV566443       <-- GAATGCTTGATTCTTTGACAAACTTCTCCAGAGCTTCCCCATTGAAATCC
FY451114       <-- GAATGCTTGATTCTTTGACAAACTTCTCCAGAGCTTCCCCATTGAAATCC
FY432843       <-- GAATGCTTGATTCTTTGACAAACTTCTCCAGAGCTTCCCCATTGAAATCC
EX895181       <-- GAATGCTTGATTCTTTGACAAACTTCTCCAGAGCTTCCCCATTGAAATCC
EY946335       <-- ................GACAAACT-CTCCAGAGCTTCCCCATTGAAATC-
EV538021       <-- ..................................TTCCCCATTGAAATC-
EY924289       <-- .....................................CCCATTGAAATCC
FD578669       <-- ..................................................
FD975876       --> ..................................................
EV542125       --> ..................................................
FD966840       --> ..................................................
FD942098       --> ..................................................
EV571572       --> ..................................................
EX899272       --> ..................................................
EY942452       --> ..................................................
EV541431       --> ..................................................
EV543314       --> ..................................................
EV543661       --> ..................................................
EX768491       --> ..................................................
FD977545       --> ..................................................
FY444867       --> GAATGCTTGA........................................

               1051   -   1101
UN13850        --> TTGGAATCGACAAAAAGTTCATCGAAAGGCTTGAATAGCCTCACGACAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX762090       <-- ..................................................
FD970493       <-- ..................................................
EX895795       <-- ..................................................
FD981866       <-- ..................................................
EX896365       <-- TTGGAATCGACAAAAAGTTCATCGAAAGGCTTGAATAGCCTCACGACAGG
EV566443       <-- TTGGAATCGACAAAAAGTTCATCGAAAGGCTTGAATAGCCTCACGACAGG
FY451114       <-- TTGGAATCGACAAAAAGTTCATCGAAAGGCTTGAATAGCCTCACGACAGG
FY432843       <-- TTGGAATCGACAAAAAGTTCATCGAAAGGCTTGAATAGCCTCACGACAGG
EX895181       <-- TTGGAATCGACAAAAAGTTCATCGAAAGGCTTGAATAGCCTCACGACAGG
EY946335       <-- TTGGA-TCGACAAAAAGT-CATCGAAAGGCTTGAATAGC-TCACGACAGG
EV538021       <-- TTGGAATCGACAAAAAGTTCATCGAAAGGCTTGAATAGCCTCACGACAGG
EY924289       <-- TTGGAATCGACAAAAAGTTCATCGAAAGGCTTGAATAGCCTCACGACAGG
FD578669       <-- ..................................................
FD975876       --> ..................................................
EV542125       --> ..................................................
FD966840       --> ..................................................
FD942098       --> ..................................................
EV571572       --> ..................................................
EX899272       --> ..................................................
EY942452       --> ..................................................
EV541431       --> ..................................................
EV543314       --> ..................................................
EV543661       --> ..................................................
EX768491       --> ..................................................
FD977545       --> ..................................................
FY444867       --> ..................................................

               1101   -   1151
UN13850        --> TCCCGCCACAGATGAGTCTCCACGAGGAAGAAGCTTGGCGTCCAAAGTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX762090       <-- ..................................................
FD970493       <-- ..................................................
EX895795       <-- ..................................................
FD981866       <-- ..................................................
EX896365       <-- TCCCGCCACAGATGAGTCTCCACGAGGAAGAAGCTTGGCGTCCAAAGTAT
EV566443       <-- TCCCGCCACAGATGAGTCTCCACGAGGAAGAAGCTTGGCGTCCAAAGTAT
FY451114       <-- TCCCACCACAGATGAGTCTCCACGAGGAAGAAGCTTGGCGTCCAAAGTAT
FY432843       <-- TCCCACCACAGATGAGTCTCCACGAGGAAGAAGCTTGGCGTCCAAAGTAT
EX895181       <-- TCCCGCCACAGATGAGTCTCCACGAGGAAGAAGCTTGGCGTCCAAAGTAT
EY946335       <-- TCCCGCCACAGATGAGTCTCCACGAGGAAGAAGCTTGGCGTCCAAAGTAT
EV538021       <-- TCCCGCCACAGATGAGTCTCCACGAGGAAGAAGCTTGGCGTCCAAAGTAT
EY924289       <-- TCCTGCCACAGATGAGTCTCCACGAGGAAGAAGCTTGGCGTCCAAAGTAT
FD578669       <-- ..................................................
FD975876       --> ..................................................
EV542125       --> ..................................................
FD966840       --> ..................................................
FD942098       --> ..................................................
EV571572       --> ..................................................
EX899272       --> ..................................................
EY942452       --> ..................................................
EV541431       --> ..................................................
EV543314       --> ..................................................
EV543661       --> ..................................................
EX768491       --> ..................................................
FD977545       --> ..................................................
FY444867       --> ..................................................

               1151   -   1201
UN13850        --> GTGCGAAATCATAGTCAGCGCGCAGTTTCTCAGCAAGGGCCACGAAAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX762090       <-- ..................................................
FD970493       <-- ..................................................
EX895795       <-- ..................................................
FD981866       <-- ..................................................
EX896365       <-- GTGCGAAtcc........................................
EV566443       <-- GTGCGAAATCATAGTCAGCACGCAATTTCTCAGCAAGGGCCACGAAAGAA
FY451114       <-- GTGCGAAATCATAGTCAGCGCGCAGTTTCTCAGCAAGGGCCACGAAAGAA
FY432843       <-- GTGCGAAATCATAGTCAGCGCGCAGTTTCTCAGCAAGGGCCACGAAAGAA
EX895181       <-- GTGCGAAATCATAGTCAGCACGCAATTTCTCAGCAAGGGCCACGAAAGAA
EY946335       <-- GTGCGAAATCATAGTCAGCACGCAATTTCTCAGCAAGGGCCACGAAAGAA
EV538021       <-- GTGCGAAATCATAGTCAGCGCGCAGTTTCTCAGCAAGGGCCATGAAAGAA
EY924289       <-- GTGCGAAATCATAGTCAGCGCGCAGTTTCTCAGCAAGGGCCACGAAAGAA
FD578669       <-- .TGCGAAATCATAGTCAGCACGCAATTTCTCAGCAAGGGCCACGAAAGAA
FD975876       --> ..................................................
EV542125       --> ..................................................
FD966840       --> ..................................................
FD942098       --> ..................................................
EV571572       --> ..................................................
EX899272       --> ..................................................
EY942452       --> ..................................................
EV541431       --> ..................................................
EV543314       --> ..................................................
EV543661       --> ..................................................
EX768491       --> ..................................................
FD977545       --> ..................................................
FY444867       --> ..................................................

               1201   -   1251
UN13850        --> TCAAACTCCTCACCGGATAACTTAGGGAACACACCAACAGCAACAACATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX762090       <-- ..................................................
FD970493       <-- ..................................................
EX895795       <-- ..................................................
FD981866       <-- ..................................................
EX896365       <-- ..................................................
EV566443       <-- TCAAACTCCTCACCGGATAACTTAGGGAACACACCAACAGCAACAACGTT
FY451114       <-- TCAAACTCCTCACCGGATAACTTAGGGAACACACCAACAGCAACAACATT
FY432843       <-- TCAAACTCCTCACCGGATAACTTAGGGAACACACCAACAGCAACAACATT
EX895181       <-- TCAAACTCCTCACCGGATAACTTAGGGAACACACCAACAGCAACAACATT
EY946335       <-- TCAAATTCCTCACCGGATAACTTAGGGAACACACCAACAGCAACAACATT
EV538021       <-- TCAAACTCCTCACCGTATAACTTAGGGAACACACCAACAGCAACAACATT
EY924289       <-- TCAAACTCCTCACCGGATAACTTAGGGAACAAACCAACAGCAACAACATT
FD578669       <-- TCAAATTCCTCACCGGATAACTTAGGGAACACACCAACAGCAACAACATT
FD975876       --> ..................................................
EV542125       --> ..................................................
FD966840       --> ..................................................
FD942098       --> ..................................................
EV571572       --> ..................................................
EX899272       --> ..................................................
EY942452       --> ..................................................
EV541431       --> ..................................................
EV543314       --> ..................................................
EV543661       --> ..................................................
EX768491       --> ..................................................
FD977545       --> ..................................................
FY444867       --> ..................................................

               1251   -   1301
UN13850        --> CTTCTCACCAATAACCTCACCAGCAACATCAGCCGACTTAATCTCAGCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX762090       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD970493       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX895795       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD981866       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX896365       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV566443       <-- CTTCTCACCAATAACCTCACCAGCAACATCAGCTGACTTAATCTCAGCAG  Raphanus raphanistrum subsp. landra
FY451114       <-- CTTCTCACCAATAACCTCACCAGCAGCATCAGCCGACTTAATCTCAGCAG  Raphanus sativus cv GSK3-1
FY432843       <-- CTTCTCACCAATAACCTCACCAGCAGCATCAGCCGACTTAATCTCAGCAG  Raphanus sativus cv GSK3-1
EX895181       <-- CTTCTCACCAATAACCTCACCAGCAACATCAGCTGACTTAATCTCAGCAG  Raphanus sativus cv Early Scarlet Globe
EY946335       <-- CTTCTCACCAATAACCTCACCAGCAACATCAGCCGACTTAATCTCAGCAG  Raphanus sativus cv Rat-Tail Radish #3870
EV538021       <-- CTTCTCACCAATAACCTCACCAGCAACATCAGCCGACTCAATCTCAGCAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY924289       <-- CTTCTCACCAATAACCTCACCAGCAGCATCAGCTGACTTAATCTCAGCAG  Raphanus raphanistrum subsp. landra
FD578669       <-- CTTCTCACCAATAACCTCACCAGCAACATCAGCCGACTTAATCTCAGCAG  Raphanus sativus cv Rat-Tail Radish #3870
FD975876       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV542125       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD966840       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD942098       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EV571572       --> ..................................................  Raphanus raphanistrum subsp. landra
EX899272       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY942452       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV541431       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV543314       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV543661       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX768491       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD977545       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY444867       --> ..................................................  Raphanus sativus cv GSK3-1

               1301   -   1351
UN13850        --> AAGCAGGTCCACTCTGCTTCTTCACATAAGTCACAATACCCGCGGATTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX762090       <-- ..................................................
FD970493       <-- ..................................................
EX895795       <-- ..................................................
FD981866       <-- ..................................................
EX896365       <-- ..................................................
EV566443       <-- AAGCAGGTCCACTCTGCTTCTTCACATAAGTCACAATACCCGCGGATTCA
FY451114       <-- AAGCAGGTCCACTCTGCTTCTTCACATAAGTCACAATACCCGCGGATTCA
FY432843       <-- AAGCAGGTCCACTCTGCTTCTTCACATAAGTCACAATACCCGCGGATTCA
EX895181       <-- AAGCAGGTCCACTCTGCTTCTTCACATAAGTCACAATACCCGGAGCTTCA
EY946335       <-- AAGCAGGTCCACTCTGCTTCTTCACATAAGTCACAATACCCGCGGATTCA
EV538021       <-- AAGCAGGTCCACTCTGCTTCTTCACATAAGTCACAATACCCGGAGCTTCA
EY924289       <-- AAGCAGGTCCACTCTGCTTCTTCACATAAGTCACAATACCCGCGGATTCA
FD578669       <-- AAGCAGGTCCACTCTGCTTCTTCACATAAGTCACAATACCCGCGGATTCA
FD975876       --> ..................................................
EV542125       --> ..................................................
FD966840       --> ..................................................
FD942098       --> ..................................................
EV571572       --> ..................................................
EX899272       --> ..................................................
EY942452       --> ..................................................
EV541431       --> ..................................................
EV543314       --> ..................................................
EV543661       --> ..................................................
EX768491       --> ..................................................
FD977545       --> ..................................................
FY444867       --> ..................................................

               1351   -   1401
UN13850        --> CGAGGTCCGTTGTAATCTTGAACCGACTTCCCACCGTTCCTCAGAATCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX762090       <-- ..................................................
FD970493       <-- ..................................................
EX895795       <-- ..................................................
FD981866       <-- ..................................................
EX896365       <-- ..................................................
EV566443       <-- CGAGGTCCc.........................................
FY451114       <-- CGAGGTCCGTTGTAATCTTGAACCGACTTCCCACCCTTCCTCAGAATCTT
FY432843       <-- CGAGGTCCGTTGTAATCTTGAACCGACTTCCCACCCTTCCTCAGAATCTT
EX895181       <-- CGAGGTCCGTTGTAGTCTTGAACCGACTTCCCACCGTTCCTCAGAATCTT
EY946335       <-- CGAGGTCCGTTGTAATCTTGAACCGACTTCCCACCGTTCCTCAGAATCTT
EV538021       <-- CGAGGTCCGTTGTAATCTTGAACCGACTTCCCACCGTTCCTCAGAATCTT
EY924289       <-- CGAGGTCCGTTGTAATCTTGAACCGACTTCCCACCGTTCCTCAGAATCTT
FD578669       <-- CGAGGTCCGTTGTAATCTTGAACCGACTTCCCACCGTTCCTCAGAATCTT
FD975876       --> ..................................................
EV542125       --> ..................................................
FD966840       --> ..................................................
FD942098       --> ..................................................
EV571572       --> ..................................................
EX899272       --> ..................................................
EY942452       --> ..................................................
EV541431       --> ..................................................
EV543314       --> ..................................................
EV543661       --> ..................................................
EX768491       --> ..................................................
FD977545       --> ..................................................
FY444867       --> ..................................................

               1401   -   1451
UN13850        --> AATCGTTGGGAATCCCTGAATCTTGTACTCGTTCGCAATCCCTTTGTTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX762090       <-- ..................................................
FD970493       <-- ..................................................
EX895795       <-- ..................................................
FD981866       <-- ..................................................
EX896365       <-- ..................................................
EV566443       <-- ..................................................
FY451114       <-- AATCGTTGGGAATCCCTGAATCTTGTACTCGTTCGCAATCCCTTTGTTAG
FY432843       <-- AATCGTTGGGAATCCCTGAATCTTGTACTCGTTCGCAATCCCTTTGTTAG
EX895181       <-- GATCGTTGGGAATCCCTGAATCTTGTACTCGTTCGCAATCCCTTTGTTAG
EY946335       <-- AATCGTTGGGAATCCCTGAATCTTGTACTCGTTCGCAATCCCTTTGTTAG
EV538021       <-- GATCGTTGGGAATCCCTGAATCTTGTACTCGTTCGCAATCCCTTTGTTAG
EY924289       <-- AATCGTTGGGAATCCCTGAATCTTGTACTCGTTCGCAATCCCTTTGTTAG
FD578669       <-- AATCGTTGGGAATCCCTGAATCTTGTACTCGTTCGCAATCCCTTTGTTAG
FD975876       --> ..................................................
EV542125       --> ..................................................
FD966840       --> ..................................................
FD942098       --> ..................................................
EV571572       --> ..................................................
EX899272       --> ..................................................
EY942452       --> ..................................................
EV541431       --> ..................................................
EV543314       --> ..................................................
EV543661       --> ..................................................
EX768491       --> ..................................................
FD977545       --> ..................................................
FY444867       --> ..................................................

               1451   -   1501
UN13850        --> ACTCCTCGCTAGCATCAATCTTGGCGAGGAAGATGGGAGGGCTTTGGCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX762090       <-- ..................................................
FD970493       <-- ..................................................
EX895795       <-- ..................................................
FD981866       <-- ..................................................
EX896365       <-- ..................................................
EV566443       <-- ..................................................
FY451114       <-- ACTCCTCGCTAGCATCAATCTg............................
FY432843       <-- ACTCCTCGCTAGCATCAATCTTGGCGAGGAAGATGGGAGGGCTTTGGCTG
EX895181       <-- ACTCCTCGCTAGCATCAATCTTGGCGAGGAAGATGGGAGGGCTTTGGCTG
EY946335       <-- ACTCCTCGCTAGCATCAATCTTGGCGAGGAAGATGGGAGGGCTTTGGCTG
EV538021       <-- ACTCCTCGCTCGCATCAATCTTGGCGAGGAAGATGGGAGGGCTTTGACTG
EY924289       <-- ACTCCTCGCTAGCATCAATCTTGGCGAGGAAGATGGGAGGGCTTTGGCTG
FD578669       <-- ACTCCTCGCTAGCATCAATCTTGGCGAGGAAGATGGGAGGGCTTTGGCTG
FD975876       --> ..................................................
EV542125       --> ..................................................
FD966840       --> ..................................................
FD942098       --> ..................................................
EV571572       --> ..................................................
EX899272       --> ..................................................
EY942452       --> ..................................................
EV541431       --> ..................................................
EV543314       --> ..................................................
EV543661       --> ..................................................
EX768491       --> ..................................................
FD977545       --> ..................................................
FY444867       --> ..................................................

               1501   -   1551
UN13850        --> CTCAACTCCGCTGCAGCCTTCTCATACTCAGGAGCAAGACTCTTGCAGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX762090       <-- ..................................................
FD970493       <-- ..................................................
EX895795       <-- ..................................................
FD981866       <-- ..................................................
EX896365       <-- ..................................................
EV566443       <-- ..................................................
FY451114       <-- ..................................................
FY432843       <-- CTCAACTCCGCTGCAGCCTTCTCATACTCAGGAGCAAGACTCTTGCAGTG
EX895181       <-- CTCAACTCCGCTGCAGCCTTCTCATACTCAGGAGCAAGACTCTTGCAGTG
EY946335       <-- CTCAACTCCGCTGCAGCCTTCTCATACTCAGGAGCAAGACTCTTGCAGTG
EV538021       <-- CTCAGCTCCGCTGCAGCCTTCTCATACTCAGGAGCAAGACTCTTGCAGTG
EY924289       <-- CTCAACTCCGCTGCAGCCTTCTCATACTCAGGAGCAAGACTCTTGCAGTG
FD578669       <-- CTCAACTCCGCTGCAGCCTTCTCATACTCAGGAGCAAGACTCTTGCAGTG
FD975876       --> ..................................................
EV542125       --> ..................................................
FD966840       --> ..................................................
FD942098       --> ..................................................
EV571572       --> ..................................................
EX899272       --> ..................................................
EY942452       --> ..................................................
EV541431       --> ..................................................
EV543314       --> ..................................................
EV543661       --> ..................................................
EX768491       --> ..................................................
FD977545       --> ..................................................
FY444867       --> ..................................................

               1551   -   1601
UN13850        --> GCCACACCAAGGGGCGTAGAACTCGACGACGATGAAGTCGTGCTTGTTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX762090       <-- ..................................................
FD970493       <-- ..................................................
EX895795       <-- ..................................................
FD981866       <-- ..................................................
EX896365       <-- ..................................................
EV566443       <-- ..................................................
FY451114       <-- ..................................................
FY432843       <-- GCCACACCAAGGGGCGTAGAACTCGACGACGATGAAGTCGTGCTTGTTGA
EX895181       <-- GCCACACCAAGGGGCGTAGAACTCGACGACGATGAAGTCGTGCTTGTTGA
EY946335       <-- GCCACACCAAGGGGCGTAGAACTCGACGACGATGAAGTCGTGCTTGTTGA
EV538021       <-- GCCACAC-AAGGGGCGTAGAACTCGACGACGATGAAGTCGTGCTTGTTGA
EY924289       <-- GCCACACCAAGGGGCGTAGAACTCGACGACGATGAAGTCGTGCTTGTTGA
FD578669       <-- GCCACACCAAGGGGCGTAGAACTCGACGACGATGAAGTCGTGCTTGTTGA
FD975876       --> ..................................................
EV542125       --> ..................................................
FD966840       --> ..................................................
FD942098       --> ..................................................
EV571572       --> ..................................................
EX899272       --> ..................................................
EY942452       --> ..................................................
EV541431       --> ..................................................
EV543314       --> ..................................................
EV543661       --> ..................................................
EX768491       --> ..................................................
FD977545       --> ..................................................
FY444867       --> ..................................................

               1601   -   1651
UN13850        --> TGGTATCGGTGAAGTTAGAGTGATCCAACGTCAAGACGAACTCCTTCGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX762090       <-- ..................................................
FD970493       <-- ..................................................
EX895795       <-- ..................................................
FD981866       <-- ..................................................
EX896365       <-- ..................................................
EV566443       <-- ..................................................
FY451114       <-- ..................................................
FY432843       <-- TGGTATCGGTGAAGTTAGAGTGATCCAACGTCAAGACGAACTCCTTCGTC
EX895181       <-- TGGTATCGGTGAAGTTAGAGTGATCCAACGTCAAGACGAAtattcgtgtc
EY946335       <-- TGGTATCGGTGAAGTTAGAGTGATCCAACGTCAAGACGAACTCCTTCGTC
EV538021       <-- TGGTATCGGTGAAGTTAGAGTGATCCAACGTCAAGACGAACTCCTTCGTC
EY924289       <-- TGGTATCGGTGAAGTTAGAGTGATCCAACGTCAAGACGAACTCCTTCGTC
FD578669       <-- TGGTATCGGTGAAGTTAGAGTGATCCAACGTCAAGACGAACTCCTTCGTC
FD975876       --> ..................................................
EV542125       --> ..................................................
FD966840       --> ..................................................
FD942098       --> ..................................................
EV571572       --> ..................................................
EX899272       --> ..................................................
EY942452       --> ..................................................
EV541431       --> ..................................................
EV543314       --> ..................................................
EV543661       --> ..................................................
EX768491       --> ..................................................
FD977545       --> ..................................................
FY444867       --> ..................................................

               1651   -   1701
UN13850        --> GCTTCTTCGCTTCTAATAGACGAAGCGAGGA-GAGATGATAACACAAGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX762090       <-- ..................................................
FD970493       <-- ..................................................
EX895795       <-- ..................................................
FD981866       <-- ..................................................
EX896365       <-- ..................................................
EV566443       <-- ..................................................
FY451114       <-- ..................................................
FY432843       <-- GCTTCTTCGCTTCTAATAGACGAAGCGAGGA-GAGATGATAACACAAGGA
EX895181       <-- c.................................................
EY946335       <-- GCTTCTTCGCTTCTAATAGACGAAGCGAGGA-GAGATGATAACACAA...
EV538021       <-- TCTTCTTCGCTTCTAATAGACGAAGCGAAAAGGAGA-GATAACACGAGGA
EY924289       <-- GCTTCTTCGCTTCTAATAGACGAAGCGAGGA-GAGATGATAACACAAGGA
FD578669       <-- GCTTCTTCGCTTCTAATAGACGAAGCGAGGA-GAGATGATAACACAAGGA
FD975876       --> ..................................................
EV542125       --> ..................................................
FD966840       --> ..................................................
FD942098       --> ..................................................
EV571572       --> ..................................................
EX899272       --> ..................................................
EY942452       --> ..................................................
EV541431       --> ..................................................
EV543314       --> ..................................................
EV543661       --> ..................................................
EX768491       --> ..................................................
FD977545       --> ..................................................
FY444867       --> ..................................................

               1701   -   1751
UN13850        --> TCGATAACATCGCGAAACCGTTAGACGCCATTATCGCTCTTCTCTTCACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX762090       <-- ..................................................
FD970493       <-- ..................................................
EX895795       <-- ..................................................
FD981866       <-- ..................................................
EX896365       <-- ..................................................
EV566443       <-- ..................................................
FY451114       <-- ..................................................
FY432843       <-- TCGATAACATCGCGAAACCGTTAGACGCCATTATCGCTCTctc.......
EX895181       <-- ..................................................
EY946335       <-- ..................................................
EV538021       <-- TCGATAACATCGCGAAACCGTTAGACGCCATTATCGCTCTTCTCTTCACT
EY924289       <-- TCGATAACATCGCGAAACCGTTAGACGCCATTATCGCTCTTCTCTTCACT
FD578669       <-- TCGATAACATCGCGAAACCGTTAGACGCCATTATCGCTCTTCTCTTCACT
FD975876       --> ..................................................
EV542125       --> ..................................................
FD966840       --> ..................................................
FD942098       --> ..................................................
EV571572       --> ..................................................
EX899272       --> ..................................................
EY942452       --> ..................................................
EV541431       --> ..................................................
EV543314       --> ..................................................
EV543661       --> ..................................................
EX768491       --> ..................................................
FD977545       --> ..................................................
FY444867       --> ..................................................

               1751   -   1801
UN13850        --> CCTCCTCCTCCGTGTACTACCGTTTGTACGAATATTCGT......
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX762090       <-- .............................................
FD970493       <-- .............................................
EX895795       <-- .............................................
FD981866       <-- .............................................
EX896365       <-- .............................................
EV566443       <-- .............................................
FY451114       <-- .............................................
FY432843       <-- .............................................
EX895181       <-- .............................................
EY946335       <-- .............................................
EV538021       <-- CCTCCTCCTCCGTGTACTGCCGTTTGTACGAATATTCGTgtgtcc
EY924289       <-- CCTCCTCCTCCGTGTACTACCGTTTGTACGAATATTCGTcc....
FD578669       <-- CCTCCTCCTCCGTGTACTACCGTTTGTACGAATATTCGTgtgtcc
FD975876       --> .............................................
EV542125       --> .............................................
FD966840       --> .............................................
FD942098       --> .............................................
EV571572       --> .............................................
EX899272       --> .............................................
EY942452       --> .............................................
EV541431       --> .............................................
EV543314       --> .............................................
EV543661       --> .............................................
EX768491       --> .............................................
FD977545       --> .............................................
FY444867       --> .............................................