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Alignment for radish unigene UN13881

               -5     -     45
UN13881        --> ......CACATTCCTCTCACGAAAAGTCACTCAAGCAACAAAAGAAAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX752934       <-- ..................................................
EY926216       <-- ..................................................
FD943442       <-- ..................................................
FD566684       <-- ..................................................
EV552126       --> ggactcCACATTCCTCTCACGAAAAGTCACTCAAGCAACAAAAGAAAAAG
EX749167       --> ....ggCACATTCCTCTCACGAAAAGTCACTCAAGCAACAAAAGAAAAAG
EX897838       --> .......ggaccctcgctacaAAAAGTCACTCAAGCAACAAAAGAAAAAG
EY929894       --> ..ggactccaccctcgctacaAAAAGTCACTCAAGCAACAAAAGAAAAAG
EY940214       --> ..ggactccaccctcgctacaAAAAGTCACTCAAGCAACAAAAGAAAAAG
FD947506       --> ..ggactccaccctcgctacaAAAAGTCACTCAAGCAACAAAAGAAAAAG
FD948540       --> ..ggactccaccctcgctacaAAAAGTCACTCAAGCAACAAAAGAAAAAG
FD981394       --> ..................................................

               45     -     95
UN13881        --> CGAAATCAAACAAAAATAAGATGGTTCTGCTAGACAAGCTCTGGGATGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX752934       <-- ..................................................
EY926216       <-- ..................................................
FD943442       <-- ..................................................
FD566684       <-- ..................................................
EV552126       --> CGAAATCAAACAAAAATAAGATGGTTCTGCTAGATAAGCTCTGGGATGAT
EX749167       --> CGAAATCAAACAAAAATAAGATGGTTCTGCTAGATAAGCTCTGGGATGAT
EX897838       --> CGAAATCAAACAAAAATAAGATGGTTCTGCTAGACAAGCTCTGGGATGAT
EY929894       --> CGAAATCAAACAAAAATAAGATGGTTCTGCTAGACAAGCTCTGGGATGAT
EY940214       --> CGAAATCAAACAAAAATAAGATGGTTCTGCTAGACAAGCTCTGGGATGAT
FD947506       --> CGAAATCAAACAAAAATAAGATGGTTCTGCTAGACAAGCTCTGGGATGAT
FD948540       --> CGAAATCAAACAAAAATAAGATGGTTCTGCTAGACAAGCTCTGGGA--CT
FD981394       --> ..................................................

               95     -    145
UN13881        --> GTTGTGGCCGGACCTCAACCCGACCGTGGCCTTGCCCGCCTCCGGAAGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX752934       <-- ................agcctGACCGTGGC-TTACCCGCCTCCGAAAGAT  Raphanus raphanistrum subsp. maritimus
EY926216       <-- ..................................................  Raphanus sativus var. oleiformis
FD943442       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD566684       <-- ..................................................  Raphanus sativus var. oleiformis
EV552126       --> GTTGTGGCCGGACCTCAGCCTGACCGTGGCCTTACCCGCCTCCGAAAGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX749167       --> GTTGTGGCCGGACCTCAGCCTGACCGTGGCCTTACCCGCCTCCGAAAGAT  Raphanus raphanistrum subsp. maritimus
EX897838       --> GTTGTGGCCGGACCTCAACCCGACCGTGGCCTTGCCCGCCTCCGGAAGAT  Raphanus sativus cv Early Scarlet Globe
EY929894       --> GTTGTGGCCGGACCTCAACCCGACCGTGGCCTTGCCCGCCTCCGGAAGAT  Raphanus sativus var. oleiformis
EY940214       --> GTTGTGGCCGGACCTCAACCCGACCGTGGCCTTGCCCGCCTCCGGAAGAT  Raphanus sativus cv Early Scarlet Globe
FD947506       --> GTTGTGGCCGGACCTCAACCCGACCGTGGCCTTGCCCGCCTCCGGAAGAT  Raphanus sativus cv Early Scarlet Globe
FD948540       --> GTTGTGGCCGGACCTCAACCCGACCGTGGCCTTGCCCGCCTCCGGAAGAT  Raphanus sativus cv Early Scarlet Globe
FD981394       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               145    -    195
UN13881        --> CACTACCCAACCC-ATTAATATCAGAGGAGAAGGAAGCAACAAGATGATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX752934       <-- CACTACCCAGCCC-ATTAATATCAGAGGAGAAGGAAGCAACAAGATGGTG
EY926216       <-- ..................................................
FD943442       <-- ..................................................
FD566684       <-- ..................................................
EV552126       --> CACTACCCAGCCC-ATTAATATCAGAGGAGAAGGAAGCAACAAGATGGTG
EX749167       --> CACTACCCAGCCC-ATTAATATCAGAGGAGAAGGAAGCAACAAGATGGTG
EX897838       --> CACTACCCAACCC-ATTAATATCAGAGGAGAAGGAAGCAACAAGATGATG
EY929894       --> CACTACCCAACCC-ATTAATATCAGAGGAGGAGGAAGCAACAAGATGATG
EY940214       --> CACTACCCAACCC-ATTAATATCAGAGGAGAAGGAAGCAACAAGATGATG
FD947506       --> CACTACCCAACCC-ATTAATATCAGAGGAGAAGGAAGCAACAAGATGATG
FD948540       --> CACTACCCAACGC-ATTAATATCAGAGGAGAAGGAAGCAACAAGATGATG
FD981394       --> ...TACCCAACCCCATTAATATCAGAGGAGAAGGAAGCAACAAGATGATG

               195    -    245
UN13881        --> CTTAGGTCGTTGACTATGCCGACGGTAGTGAGCCCCGGTACTCCAACTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX752934       <-- CTTAGGTCGTTGACTATGCCGATGGTAGTGAGCCCCGGTACTCCAACTAC
EY926216       <-- ..................................................
FD943442       <-- ..................................................
FD566684       <-- ..................................................
EV552126       --> CTTAGGTCGTTGACTATGCCGATGGTAGTGAGCCCCGGTACTCCAACTAC
EX749167       --> CTTAGGTCGTTGACTATGCCGATGGTAGTGAGCCCCGGTACTCCAACTAC
EX897838       --> CTTAGGTCGTTGACTATGCCGACGGTAGTGGGCCCCGGTACTCCAACTAC
EY929894       --> CTTAGGCCGTTGACTATGCCGACGGTAGTGAGCCCCGGTACTCCAACTAC
EY940214       --> CTTAGGTCGTTGACTATGCCGACGGTAGTGAGCCCCGGTACTCCAACTAC
FD947506       --> CTTAGGTCGTTGACTATGCCGACGGTAGTGAGCCCCGGTACTCCAACTAC
FD948540       --> CTTAGGTCGTTGACTATGCCGACGGTAGTGAGCCCCGGTACTCCAACTAC
FD981394       --> CTTAGGTCGTTGACTATGCCGACGGTAGTGAGCCCCGGTACTCCAACTAC

               245    -    295
UN13881        --> TCCGACCACTCCGACAACGCCACACAAGGATAACGTGTGGAGGAGCGTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX752934       <-- TCCGACCACTCCGACAACGCCACACAAGGATAACGTGTGGAGGAGCGTCT
EY926216       <-- .........TCCGACAACGCCACACAAGGATAACGTGTGGAGGAGCGTCT
FD943442       <-- ..............CAACGCCACACAAGGATAACGTGTGGAGGAGCGTCT
FD566684       <-- ..................................................
EV552126       --> TCCGACCACTCCGACAACGCCACACAAGGATAACGTGTGGAGGAGCGTCT
EX749167       --> TCCGACCACTCCGACAACGCCACACAAGGATAACGTGTGGAGGAGCGTCT
EX897838       --> TCCGACCACTCCGACAACGCCACACAAGGATAACGTGTGGAGGAGCGTCT
EY929894       --> TCCGACCACTCCGACAACGCCACACAAGGATAACGTGTGGAGGAGCGTCT
EY940214       --> TCCGACCACTCCGACAACGCCACACAAGGATAACGTGTGGAGGAGCGTCT
FD947506       --> TCCGACCACTCCGACAACGCCACACAAGGATAACGTGTGGAGGAGCGTCT
FD948540       --> TCCGACCACTCCGACAACGCCACACAAGGATAACGTGTGGAGGAGCGTCT
FD981394       --> TCCGACCACTCCGACAACGCCTCACAAGGATAACGTGTGGAGGAGCGTCT

               295    -    345
UN13881        --> TTAATCCTGGAAGCAACCTCGCCACAAGAGCCATCGGCTCCAACATCTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX752934       <-- TTAATCCTGGAAGCAACCTCGCCACAAGAGCCATCGGCTCCAACATCTTT
EY926216       <-- TTAATCCTGGAAGCAACCTCGCCACAAGAGCCATCGGCTCCAACATCTTT
FD943442       <-- TTAATCCTGGAAGCAACCTCGCCACAAGAGCCATCGGCTCCAACATCTTT
FD566684       <-- ..................................................
EV552126       --> TTAATCCTGGAAGCAACCTCGCCACAAGAGCCATCGGCTCCAACATCTTT
EX749167       --> TTAATCCTGGAAGCAACCTCGCCACAAGAGCCATCGGCTCCAACATCTTT
EX897838       --> TTAATCCTGGAAGCAACCTCGCCACAAGAGCCATCGGCTCCAACATCTTT
EY929894       --> TTAATCCTGGAAGCAACCTCGCCACAAGAGCCATCGGCTCCAACATCTTT
EY940214       --> TTAATCCTGGAAGCAACCTCGCCACAAGAGCCATCGGCTCCAACATCTTT
FD947506       --> TTAATCCTGGAAGCAACCTCGCCACAAGAGCCATCGGCTCCAACATCTTT
FD948540       --> TTAATCCTGGAAGCAACCTCGCCACAAGAGCCATCGGCTCCAACATCTTT
FD981394       --> TTAATCCTGGAAGCAACCTCGCCACAAGAGCCATCGGCTCCAACATCTTT

               345    -    395
UN13881        --> GATAAACCAACCCACCCAAATTCTCCATCCGTCTACGACTGCGATGATAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX752934       <-- GATAAACCAACCCACCCAAATTCTCCATCCGTTTACGACTGCGATGATAA
EY926216       <-- GATAAACCAACCCACCCAAATTCTCCATCCGTCTACGACTGCGATGATAA
FD943442       <-- GATAAACCAACCCACCCAAATTCTCCATCCGTTTACGACCGCGATGATAA
FD566684       <-- ..................................................
EV552126       --> GATAAACCAACCCACCCAAATTCTCCATCCGTCTACGACTGCGATGATAA
EX749167       --> GATAAACCAACCCACCCAAATTCTCCATCCGTCTACGACTGCGATGATAA
EX897838       --> GATAAACCAACCCACCCAAATTCTCCATCCGTCTACGACTGCGATGATAA
EY929894       --> GATAAACCAACCCACCCAAATTCTCCATCCGTCTACGACTGCGATGATAA
EY940214       --> GGTAAACCAACCCACCCAAATTCTCCATCCGTCTACGACTGCGATGATAA
FD947506       --> GATAAACCAACCCACCCAAATTCTCCATCCGTCTACGACCGCGATGATAA
FD948540       --> GATAAACCAACCCACCCAAATTCTCCATCCGTCTACGACTGCGATGATAA
FD981394       --> GATAAACCAACCCACCCAAATTCTCCATCCGTCTACGACTGCGATGATAA

               395    -    445
UN13881        --> CGAAGCTCAAAGGAAGGAACACGTGGCACTGTGTTTAGTGGGCGCGTGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX752934       <-- CGAAGCTCAAAGGAAGGAACACGTGGCACTGTGTTTAGTGGGCGCGTGGA
EY926216       <-- CGAAGCTCAAAGGAAGGAACACGTGGCACTGTGTTTAGTGGGCGCGTGGA
FD943442       <-- CGAAGCTCAAAGGAAGGAACACGTGGCACTGTGTTTAGTGGGCGCGTGGA
FD566684       <-- ..................................................
EV552126       --> CGAAGCTCAAAGGAAGGAACACGTGGCACTGTGTTTAGTGGGCGCGTGGA
EX749167       --> CGAAGCTCAAAGGAAGGAACACGTGGCACTGTGTTTAGTGGGCGCGTGGA
EX897838       --> CGAAGCTCAAAGGAAGGAACACGTGGCACTGTGTTTAGTGGGCGCGTGGA
EY929894       --> CGAAGCTCAAAGGAAGGAACACGTGGCACTGTGTTTAGTGGGCGCGTGGA
EY940214       --> CGAAGCTCAAAGGAAGGAACACGTGGCACTGTGTTTAGTGGGCGCGTGGA
FD947506       --> CGAAGCTCAAAGGAAGGAACACGTGGCACTGTGTTTAGTGGGCGCGTGGA
FD948540       --> CGAAGCTCAAAGGAAGGAACACGTGGCACTGTGTTTAGTGGGCGCGTGGA
FD981394       --> CGAAGCTCAAAGGAAGGAACACGTGGCACTGTGTTTAGTGGGCGCGTGGA

               445    -    495
UN13881        --> TTAAATGAAAAACAATAAAACATTACTCTGTTTTACCATATCAACCACCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX752934       <-- TTAAATGAAAAACAATAAAACATTACTCTGTTTTACCATATCAACCACCT
EY926216       <-- TTAAATGAAAAACAATAAAACATTACTCTGTTTTACCATATCAACCACCT
FD943442       <-- TTAAATGAAAAACAATAAAACATTACTCTGTTTTACCATATCAACCACCT
FD566684       <-- ..................................................
EV552126       --> TTAAATGAAAAACAATAAAACATTACTCTGTTTTACCATATCAACCACCT
EX749167       --> TTAAATGAAAAACAATAAAACATTACTCTGTTTTACCATATCAACCACCT
EX897838       --> TTAAATGAAAAACAATAAAACATTACTCTGTTTTACCATATCA-CCACCT
EY929894       --> TTAAATGAAAAACAATAAAACATTACTCTGTTTTACCATATCAACCACCT
EY940214       --> TTAAATGAAAAACAATAAAACATTACTCTGTTTTACCATATCAACCACCT
FD947506       --> TTAAATGAAAAACAATAAAACATTACTCTGTTTTACCATATCAACCACCT
FD948540       --> TTAAATGAAAAACAATAAAACATTACTCTGTTTTACCATATCAACCACCT
FD981394       --> TTAAATGAAAAACAATAAAACATTACTCTGTTTTACCATATCAACCACCT

               495    -    545
UN13881        --> TCCTTTATTGTGCATATATGGTTGTACAGCG-GCGAGTCAAGGAGTCAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX752934       <-- TCCTTTATTGTGCATATATGGTTGTACAGCG-GCGAGTCAAGGAGCCAGC
EY926216       <-- TCCTTTATTGTGCATATATGGTTGTACAGCG-GCGAGTCAAGGAGTCAGC
FD943442       <-- TCCTTTATTGTGCATATATGGTTGTACAGCG-GCGAGTCAAGGAGTCAGC
FD566684       <-- ...gcatccgtttacgacTGGTTGTACAGCGTACGAGTCAAGGAGTCAGC
EV552126       --> TCCTTTATTGTGCATATATGGTTGTACAGCG-GCGAGTCAAGGAGCCAGC
EX749167       --> TCCTTTATTGTGCATATATGGTTGTACAGCG-GCGAGTCAAGGAGCCAGC
EX897838       --> TCCTTTATTGTGCATATATGGTTGTACAGCG-GCGAGTCAAGGAGTCAGC
EY929894       --> TCCTTTATTGTGCATATATGGTTGTACAGCG-GCGAGTCAAGGAGTCAGC
EY940214       --> TCCTTTATTGTGCATATATGGTTGTACAGCG-GCGAGTCAAGGAGTCAGC
FD947506       --> TCCTTTATTGTGCATATATGGTTGTACAGCG-GCGAGTCAAGGAGTCAGC
FD948540       --> TCCTTTATTGTGCATATATGGTTGTACAGCG-GCGAGTCAAGGAGTCAGC
FD981394       --> TCCTTTATTGTGCATATATGGTTGTACAGCG-GCGAGTCAAGGAGTCAGC

               545    -    595
UN13881        --> ACCGTTAAAAGCGAGTCAGAGGGAGTGACACAAGTGGGTGATATAAATAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX752934       <-- ACCGTTAAAAGCGAGTCAGAGGGAGTGGCACAAGTGGGTGATATAAATAT
EY926216       <-- ACCGTTAAAAGCGAGTCAGAGGGAGTGACACAAGTGGGTGATATAAATAT
FD943442       <-- ACCGTTAAAAGCGAGTCAGAGGGAGTGACACAAGTGGGTGATATAAATAT
FD566684       <-- ACCGTTAAAAGCGAGTCAGAGGGAGTGACACAAGTGGGTGATATAAATAT
EV552126       --> ACCGTTAAAAGCGAGTCAGAGGGAGTGACACAAGTGGGTGATATAAATAT
EX749167       --> ACCGTTAAAAGCGAGTCAGAGGGAGTGGCACAAGTGGGTGATATAAATAT
EX897838       --> ACCGTTAAAAGCGAGTCAGAGGGAGTGACACAAGTGGGTGATATAAATAT
EY929894       --> ACCGTTAAAAGCGAGTCAGAGGGAGTGACACAAGTGGGTGATATAAATAT
EY940214       --> ACCGTTAAAAGCGAGTCAGAGGGAGTGACACAAGTGGGTGATATAAATAT
FD947506       --> AC................................................
FD948540       --> ACCGTTAAAAGCGAGTCAGAGGGAGTGACACAAGTGGGTGATATAAATAT
FD981394       --> ACCGTTAAAAGCGAGTCAGAGGGAGTGACACAAGTGGGTGATATAAATAT

               595    -    645
UN13881        --> GGTGTCTAGATCTACCTTCACGAGTTCACGTGTCTGTTTTGCTTGTGTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX752934       <-- GGTGTCTAGATCTACCTTCACGAGTTCACGTGTCTGTTTTGCTTGTGTAC
EY926216       <-- GGTGTCTAGATCTACCTTCACGAGTTCGCGTGTCTGTTTTGCTTGTGTAC
FD943442       <-- GGTGTCTAGATCTACCTTCACGAGTTCACGTGTCTGTTTTGCTTGTGTAC
FD566684       <-- GGTGTCTAGATCTACCTTCACGAGTTCACGTGTCTGTTTTGCTTGTGTAC
EV552126       --> GGTGTCTAGATCTACCTTCACGAGTTCACGTGCCTGTTTTGCTTGTGTAC
EX749167       --> GGTGTCTAGATCTACCTTCACGAGTTCACGTGTCTGTTTTGCTTGTGTAC
EX897838       --> GGTGTCTAGATCTACCTTCACGAGTTCACGTGTCTGTTTTGCTTGTGTAC
EY929894       --> GGTGTCTAGATCTACCTTCACGAGTTCGCGTGTCTGTTTTGCTTGTGTAC
EY940214       --> GGTGTCTAGATCTACCATCACGAGTTCACGTGTCTGTTTTGCTTGTGTAC
FD947506       --> ..................................................
FD948540       --> GGTGTCTAGATCTACCTTCACGAGTTCACGTGTCTGTTTTGCTTGTGTAC
FD981394       --> GGTGTCTAGATCTACCTTCACGAGTTCACGTGTCTGTTTTGCTTGTGTAC

               645    -    695
UN13881        --> ATAACTGTCTTCCACCTATGCAATAAGTTGTCACGTTGTTAACTTTCCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX752934       <-- ATAACTGTCTTCCACCTATGCAATAAGTTGTCACGTTGTTAACTTTCCAC
EY926216       <-- ATAACTGTCTTCCACCTATGCAATAAGTTGTCACGTTGTTAACTTTCCAC
FD943442       <-- ATAACTGTCTTCCACCTATGCAATAAGTTGTCACGTTGTTAACTTTCCAC
FD566684       <-- ATAACTGTTTTCCACCTATGCAATAAGTTGTCACGTTGTTAACTTTCCAC
EV552126       --> ATAACTGTCTTCCACCTATGCAATAAGTTGTCACGTTGTTAACTTTCCAC
EX749167       --> ATAACTGTCTTCCACCTATGCAATAAGTTGTCACGTTGTTAACTTTCCAC
EX897838       --> ATAACTGTCTTCCACCTATGCA-T-AGTTGTCACGTTGTTAACTTTCCAC
EY929894       --> ATAACTGTCTTCCACCTATGCAA-AAGTTGTCACGTTGTTAACTTTCCAC
EY940214       --> ATAACTGTCTTCCACCTATGCAATAAGTTGTCACGTTGTTAACTTTCCAC
FD947506       --> ..................................................
FD948540       --> ATAACTGTCTTCCACCTATGCAATAAGTTGTCACGTTGTTAACTTTCCAC
FD981394       --> ATAACTGTCTTCCAC-TATGCAATAAGTTGTCACGTTGTTAACTTTC-AC

               695    -    745
UN13881        --> TTTGGGCTGTGTTTTGCAAGTTTTCCTTTGTGTGTTTTGTACTTGTAACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX752934       <-- TTTGGGCTGTGTTTTGCAAGTTTTCCTTTGTGTGTTTTGTACTTGTAACT
EY926216       <-- TTTGGGCTGTGTTTTGCAAGTTTTCCTTTGTGTGTTTTGTACTTGTAACT
FD943442       <-- TTTGGGCTATGTTTTGCAAGTTTTCCTTTGTGTGTTTTGTACTTGTAACT
FD566684       <-- TTTGGGCTGTGTTTTGCAAGTTTTCCTTTGTGTGTTTTGTACTTGTAACT
EV552126       --> TTTGGGCTGTGTTTTGCAAGTTTTCCTTTGTGTGTTTTGTACTTGTAACT
EX749167       --> TTTGGGCTGTGTTTTGCAAGTTTTCCTTTGTGTGTTT-GTACTTGTAACT
EX897838       --> TTTGGGCTGTGTTT....................................
EY929894       --> TTTGGGCTGTGTTTTGCAAGTTTTCCTTTGTGTGTTTTGTACT-GTA-CT
EY940214       --> TTTGGGCTGTGTTTTGCA-GTTTT..........................
FD947506       --> ..................................................
FD948540       --> TTTGGGCTGTGTTTTGCAAGTTTTCCTTTGTGTGTTTTGTACCTGTAACT
FD981394       --> TTTGGGCTGTGTTTgcagtttc............................

               745    -    795
UN13881        --> TGCAAGTGACGGGTTTGAACCAAAAAAA-GCTTGCAAGTGACGGCTGAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX752934       <-- TGCAAGTGACGGGTTTGAACCAAAAAAAAGCTTGCAAGTGACGGCTGAAT
EY926216       <-- TGCAAGTGACGGGTTTGAACCAAAAAAA-GCTTGCAAGTGACGGCTGAAT
FD943442       <-- TGCAAGTGACGGGTTTGAACCAAAAAAA-GCTTGCAAGTGACGGCTGAAT
FD566684       <-- TGCAAGTGACGGGTTTGAACCAAAAAAA-GCTTGCAAGTGACGGCTGAAT
EV552126       --> TGCAAGTGACGGGTT...................................
EX749167       --> TGCAAGTGACGGGTTTGA-CCAAAAAAA......................
EX897838       --> ..................................................
EY929894       --> -GCA-GTGACGGGTTTGA-CCAAAAAA.......................
EY940214       --> ..................................................
FD947506       --> ..................................................
FD948540       --> TGCAAG............................................
FD981394       --> ..................................................

               795    -    845
UN13881        --> CTTCACTGTCCCGTTGGATTTTGGTTGTGAAAATGCCTCTGCTTTTTCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX752934       <-- CTTCACTGTCCCGTTGGATTTTGGTTGTGAAAATGCCTCTGCTTTTTTTA
EY926216       <-- CTTCACTGTCCCGTTGGATTTTGGTTGTGAAAATGCCTCTGCTTTTTCTA
FD943442       <-- CTTCACTGTCCCGTTGGATTTTGGTTGTGAAAATGCCTCTGCTTTTTCTA
FD566684       <-- TTTCACTGTCCCGTTGGATTTTGGTTGTGAAAATGCCTTTGCTTTTTCTA
EV552126       --> ..................................................
EX749167       --> ..................................................
EX897838       --> ..................................................
EY929894       --> ..................................................
EY940214       --> ..................................................
FD947506       --> ..................................................
FD948540       --> ..................................................
FD981394       --> ..................................................

               845    -    895
UN13881        --> GTGCTAATAAGATCTTGTTTATATAAAATGTTGGTGGTTTTATGGTAGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX752934       <-- GTGCTAATAAGATCTTGTTTATAT..........................
EY926216       <-- GTGCTAATAAGATCTTGTTTATATAAAATGTTGGTGGTTTTATGGTAGTG
FD943442       <-- GTGCTAATAAGATCTTGTTTATAT..........................
FD566684       <-- GTGCTAATAAGATCTTGTTTATAT..........................
EV552126       --> ..................................................
EX749167       --> ..................................................
EX897838       --> ..................................................
EY929894       --> ..................................................
EY940214       --> ..................................................
FD947506       --> ..................................................
FD948540       --> ..................................................
FD981394       --> ..................................................

               895    -    945
UN13881        --> AAAAAGTGTTAATTTTTT
                   ~~~~~~~~~~~~~~~~~~
EX752934       <-- ..................
EY926216       <-- AAAAAGTGTTAATTTTTT
FD943442       <-- ..................
FD566684       <-- ..................
EV552126       --> ..................
EX749167       --> ..................
EX897838       --> ..................
EY929894       --> ..................
EY940214       --> ..................
FD947506       --> ..................
FD948540       --> ..................
FD981394       --> ..................