1      -     51
UN13891        --> GGACAACTCAACTCAAAAGGAAA-CAAAGAAAAAACCTACCAAACCCTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532635       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV544601       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD984090       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY936336       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX769091       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX901118       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX768997       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX777348       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD966704       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY901984       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD984778       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY902014       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD536801       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY895687       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD974831       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX761312       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX761513       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY902561       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY902358       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD968931       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542951       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD538170       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY903534       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV528722       --> GGACAACTCAACTCAAAAGGAAA-CAAAGAAAAAACCTACCAAACCCTAA  Raphanus raphanistrum subsp. maritimus
EY906373       --> GGACAACTCAACTCAAAAGGAAA-CAAAGAAAAAACCTACCAAACCCTAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY940603       --> GGACAACTCAACTCAAAAGGAAAACAAAGAAAAAACCTACCAAACCCTAA  Raphanus sativus cv Early Scarlet Globe
FD978625       --> .ggCAACTCAACTCAAAAGGAAA-CAAAGAAAAAACCTACCAAACCCTAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX757827       --> ..ggAACTCAACTCAAAAGGAAA-CAAAGAAAAAACCTACCAAGCCCTAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX765205       --> ..ggAACTCAACTCAAAAGGAAA--AAAGAAAAAACCTACCAAACCCTAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX765294       --> ...gAACTCAACTCAAAAGGAAAACAAAGAAAAAACCTACCAAACCCTAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX897343       --> ..ggAACTCAACTCAAAAGGAAAACAAAGAAAAAACCTACCAAACCCTAA  Raphanus sativus cv Early Scarlet Globe
EY900043       --> .gggAACTCAACTCAAAAGGAAA-CAAAGAAAAAACCTACCAAACCCTAA  Raphanus raphanistrum subsp. maritimus
EY905584       --> ..ggAACTCAACTCAAAAGGAAA-CAAAGAAAAAACCTACCAAACCCTAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY907649       --> ..ggAACTCAACTCAAAAGGAAA-CAAAGAAAAAACCTACCAAACCCTAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD540270       --> ..ggAACTCAACTCAAAAGGAAA-CAAAGAAAAAACCTACCAAGCCCTAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD542006       --> ..ggAACTCAACTCAAAAGGAAA-CAAAGAAAAAACCTACCAAGCCCTAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD973196       --> ..ggAACTCAACTCAAAAGGAAA-CAAAGAAAAAACCTACCAAACCCTAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD988155       --> ..ggAACTCAACTCAAAAGGAAAACAAAGAAAAAACCTACCAAACCCTAA  Raphanus raphanistrum subsp. landra
EX758079       --> ......gTCAACTCAAAAGGAAA-CAAAGAAAAAACCTACCAAACCCTAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV539072       --> .......ggAACTCAAAAGGAAA-CAAAGAAAAAACCTACCAAACCCTAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV549043       --> .......ggAACTCAAAAGGAAA-CAAAGAAAAAACCTACCAAACCCTAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY906079       --> .......ggAACTCAAAAGGAAA-CAAAGAAAAAACCTACCAAACCCTAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY907754       --> ......gggAACTCAAAAGGAAA-CAAAGAAAAAACCTACCAAGCCCTAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD557910       --> .......ggAACTCAAAAGGAAAACAAAGAAAAAACCTACCAAACCCTAA  Raphanus raphanistrum subsp. landra
FY434706       --> ..................................................  Raphanus sativus cv GSK3-1
EX773548       --> ..................................................  Raphanus raphanistrum subsp. landra
FD988144       --> ..................................................  Raphanus raphanistrum subsp. landra
FD970304       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY905623       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD988931       --> ..................................................  Raphanus raphanistrum subsp. landra

               51     -    101
UN13891        --> AACACACAAATATCAATCACAATGATGTCCTCGTTCCCACTGGTCTCCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532635       <-- AACACACGAATATCAATCACAATGATGTCCTCGTTCCCATTGGTCTCCTT  Raphanus raphanistrum subsp. maritimus
EV544601       <-- ..........TATCAATCACAATGATGTCCTCGTTCCCATTGGTCTCCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD984090       <-- ................TCACAATGACGTCCTCGTTCCCACTG-TCTCCTT  Raphanus raphanistrum subsp. landra
EY936336       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX769091       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX901118       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX768997       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX777348       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD966704       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY901984       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD984778       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY902014       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD536801       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY895687       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD974831       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX761312       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX761513       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY902561       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY902358       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD968931       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542951       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD538170       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY903534       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV528722       --> AACACACGAATATCAATCACAATGATGTCCTCGTTCCCATTGGTCTCCTT  Raphanus raphanistrum subsp. maritimus
EY906373       --> AACACACAAATATCAATCACAATGATGTCCTCGTTCCCACTGGTCTCCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY940603       --> AACACACAAATATCAATCGCAATGACGTCCTCGTTCCCACTGGTCTCCTT  Raphanus sativus cv Early Scarlet Globe
FD978625       --> AACACACAAATATCAATCACAATGATGTCCTCGTTCCCATTGGTCTCCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX757827       --> AACACACAAATATCAATCACAATGATGTCCTCGTTCCCATTGGTCTCCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX765205       --> AACACACAAATATCAATCACAATGATGTCCTCGTTCCCATTGGTCTCCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX765294       --> AACACACAAATATCAATCACAATGACGTCCTCGTTCCCACTGGTCTCCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX897343       --> AACACACAAATATCAATCACAATGACGTCCTCGTTCCCACTGGTCTCCTT  Raphanus sativus cv Early Scarlet Globe
EY900043       --> AACACACAAATATCAATCACAATGATGTCCTCGTTCCCATTGGTCTCCTT  Raphanus raphanistrum subsp. maritimus
EY905584       --> AACACACAAATATCAATCACAATGATGTCCTCGTTCCCACTGGTCTCCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY907649       --> AACACACAAATATCAATCACAATGATGTCCTCGTTCCCACTGGTCTCCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD540270       --> AACACACAAATATCAATCACAATGAT--CCTCGTTCCCATTGGTCTCCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD542006       --> AACACACAAATATCAATCACAATGATGTCCTCGTTCCCATTGGTCTCCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD973196       --> AACACACAAATATCAATCACAATGATGTCCTCGTTCCCACTGGTCTCCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD988155       --> AACACACAAATATCAATCACAATGACGTCCTCGTTCCCACTGGTCTCCTT  Raphanus raphanistrum subsp. landra
EX758079       --> AACACACAAATATCAATCACAATGATGTCCTCGTTCCCACTGGTCTCCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV539072       --> AACACACAAATATCAATCACAATGATGTCCTCGTTCCCACTGGTCTCCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV549043       --> AACACACAAATATCAATCACAATGATGTCCTCGTTCCCATTGGTCTCCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY906079       --> AACACACAAATATCAATCACAATGATGTCCTCGTTCCCACTGGTCTCCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY907754       --> AACACACAAATATCAATCACAATGATGTCCTCGTTCCCATTGGTCTCCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD557910       --> AACACACAAATATCAATCACAATGACGTCCTCGTTCCCACTGGTCTCCTT  Raphanus raphanistrum subsp. landra
FY434706       --> .....ACAAATATCAATCACAATGATGTCCTCGTTCCCATTGGTCTCCTT  Raphanus sativus cv GSK3-1
EX773548       --> ..................................................  Raphanus raphanistrum subsp. landra
FD988144       --> ..................................................  Raphanus raphanistrum subsp. landra
FD970304       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY905623       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD988931       --> ..................................................  Raphanus raphanistrum subsp. landra

               101    -    151
UN13891        --> TCTCATCACTCTCATGTTGGCTGCAGCTGTATGCACCCACGGAGGACAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532635       <-- TCTCATCACTCTCATGTTGGCTGCAGCTGTATGCACCCACGGAGGACAGG
EV544601       <-- TCTCATCACTCTCATGTTGGCTGCAGCTGTATGCACCCACGGAGGACAGG
FD984090       <-- TCTCATCACTCTCATGTTGGCTGCAGCTGTATGCACCCACGGAGGACAGG
EY936336       <-- .....TCACTCTCATGTTGGCTGCAGCTGTATGCACCCACGGAGGACAGG
EX769091       <-- ..........CTCATGTTGGCTGCAGCTGTATGCACCCACGGAGGACAGG
EX901118       <-- ..................................................
EX768997       <-- ..................................................
EX777348       <-- ..................................................
FD966704       <-- ..................................................
EY901984       <-- ..................................................
FD984778       <-- ..................................................
EY902014       <-- ..................................................
FD536801       <-- ..................................................
EY895687       <-- ..................................................
FD974831       <-- ..................................................
EX761312       <-- ..................................................
EX761513       <-- ..................................................
EY902561       <-- ..................................................
EY902358       <-- ..................................................
FD968931       <-- ..................................................
EV542951       <-- ..................................................
FD538170       <-- ..................................................
EY903534       <-- ..................................................
EV528722       --> TCTCATCACTCTCATGTTGGCTGCAGCTGTATGCACCCACGGAGGACAGG
EY906373       --> TCTCATCACTCTCATGTTGGCTGCAGCTGTATGCACCCACGGAGGACAGG
EY940603       --> TCTCATCACTCTCATGTTGGCTGCAGCTGTATGCACCCACGGAGGACAGG
FD978625       --> TCTCATCACTCTCATGTTGGCTGCAGCTGTATGCACCCACGGAGGACAGG
EX757827       --> TCTCATCACTCTCATGTTGGCTGCAGCTGTATGCACCCACGGAGGACAGG
EX765205       --> TCTCATCACTCTCATGTTGGCTGCAGCTGTATGCACCCACGGAGGACAGG
EX765294       --> TCTCATCACTCTCATGTTGGCTGCAGCTGTATGCACCCACGGAGGACAGG
EX897343       --> TCTCATCACTCTCATGTTGGCTGCAGCTGTATGCACCCACGGAGGACAGG
EY900043       --> TCTCATCACTCTCATGTTGGCTGCAGCTGTATGCACCCACTGAGGACAGG
EY905584       --> TCTCATCACTCTCATGTTGGCTGCAGCTGTATGCACCCACGGAGGACAGG
EY907649       --> TCTCATCACTCTCATGTTGGCTGCAGCTGTATGCACCCACGGAGGACAGG
FD540270       --> TCTCATCACTCTCATGTTGGCTGCAGCTGTATGCACCCACGGAGGACAGG
FD542006       --> TCTCATCACTCTCATGTTGGCTGCAGCTGTATGCACCCACGGAGGACAGG
FD973196       --> TCTCATCACTCTCATGTTGGCTGCAGCTGTATGCACCCACGGAGGACAGG
FD988155       --> TCTCATCACTCTCATGTTGGCTGCAGCTGTATGCACCCACGGAGGACAGG
EX758079       --> TCTCATCACTCTCATGTTGGCTGCAGCTGTATGCACCCACGGAGGACAGG
EV539072       --> TCTCATCACTCTCATGTTGGCTGCAGCTGTATGCACCCACGGAGGACAGG
EV549043       --> TCTCATCACTCTCATGTTGGCTGCAGCTGTATGCACCCACGGAGGACAGG
EY906079       --> TCTCATCACTCTCATGTTGGCTGCAGCTGTATGTACCCACGGAGGACAGG
EY907754       --> TCTCATCACTCTCATGTTGGCTGCAGCTGTATGCACCCACGGAGGACAGG
FD557910       --> TCTCATCACTCTCATGTTGGCTGCAGCTGTATGCACCCACGGAGGACAGG
FY434706       --> TCTCATCACTCTCATGTTGGCTGCAGCTGTATGCACCCACGGAGGACAGG
EX773548       --> ..................................................
FD988144       --> ..................................................
FD970304       --> ..................................................
EY905623       --> ..................................................
FD988931       --> ..................................................

               151    -    201
UN13891        --> AACACGTGCTGGACACCTCCGAAGATCCAGTTCTAACGACTGCACGATAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532635       <-- AACACGTGCTGGACACCTCCGAAGATCCAGTTCTAACGACTGCACGATAC
EV544601       <-- AACACGTGCTGGACACCTCCGAAGATCCAGTTCTAACTACTGCACGATAC
FD984090       <-- AGCACGTGCTGGACACCTCCGAAGATCCAGTTCTAACGACTGCACGATAC
EY936336       <-- AACACGTGCTGGACACCTCCGAAGATCCAGTTCTAACGACTGCACGATAC
EX769091       <-- AACACGTGCTGGACACCTCCGAAGATCCAGTTCTAACGACTGCACGATAC
EX901118       <-- .....................AAGATCCAGTTCTAACGACTGCACGATAC
EX768997       <-- .......................GATCCAGTTCTAACGACTGCACGATAC
EX777348       <-- .........................TCCAGTTCTAACGACTGCACGATAC
FD966704       <-- ..........................................CACGATAC
EY901984       <-- ...........................................ACGATAC
FD984778       <-- ..................................................
EY902014       <-- ..................................................
FD536801       <-- ..................................................
EY895687       <-- ..................................................
FD974831       <-- ..................................................
EX761312       <-- ..................................................
EX761513       <-- ..................................................
EY902561       <-- ..................................................
EY902358       <-- ..................................................
FD968931       <-- ..................................................
EV542951       <-- ..................................................
FD538170       <-- ..................................................
EY903534       <-- ..................................................
EV528722       --> AACACGTGCTGGACACCTCCGAAGATCCAGTTCTAACGACTGCACGATAC
EY906373       --> AACACGTGCTGGACACCTCCGAAGATCCAGTTCTAACGACTGCACGATAC
EY940603       --> AACACGTGCTGGACACCTCCGAAGATCCAGTTCTAACGACTGCACGATAC
FD978625       --> AACACGTGCTGGACACCTCCGAAGATCCAGTTCTAACTACTGCACGATAC
EX757827       --> AACACGTGCTGGACACCTCCGAAGATCCAGTTCTAACGACTGCACGATAC
EX765205       --> AACACGTGCTGGACACCTCCGAAGATCCAGTTCTAACGACTGCACGATAC
EX765294       --> AACACGTGCTGGACACCTCCGAAGATCCAGTTCTAACGACTGCACGATAC
EX897343       --> AACACGTGCTGGACACCTCCGAAGATCCAGTTCTAACGACTGCACGATAC
EY900043       --> AACACGTGCTGGACACCTCCGAAGATCCAGCTCTAACGACTGCACGATAC
EY905584       --> AACACGTGCTGGACACCTCCGAAGATCCAGTTCTAACGACTGCACGATAC
EY907649       --> AACACGTGCTGGACACCTCCGAAGATCCAGTTCTAACGACTGCACGATAC
FD540270       --> AACACGTGCTGGACACCTCCGAAGATCCAGTTCTAACGACTGCACGATAC
FD542006       --> AACACGTGCTGGACACCTCCGAAGATCCAGTTCTAACGACCGCACGATAC
FD973196       --> AACACGTGCTGGACACCTCCGAAGATCCAGTTCTAACGACTGCACGATAC
FD988155       --> AGCACGTGCTGGACACCTCCGAAGATCCAGTTCTAACGACTGCACGATAC
EX758079       --> AACACGTGCTTGACACCTCCGAAGATCCAGTTCTAACGACTGCACGATAC
EV539072       --> AACACGTGCTGGACACCTCCGAAGATCCAGTTCTAACGACTGCACGATAC
EV549043       --> AACACGTGCTGGACACCTCCGAAGATCCAGTTCTAACTACTGCACGATAC
EY906079       --> AACACGTACTGGACACCTCCGAAGATCCAGTTCTAACGACTGCACGATAC
EY907754       --> AACACGTGCTGGACACCTCCGAAGATCCAGTTCTAACGACTGCACGATAC
FD557910       --> AACACGTGCTGGACACCTCCGAAGATCCAGTTCTAACGACTGCACGATAC
FY434706       --> AACACGTGCTGGACACCTCCGAAGATCCAGTTCTAACGACTGCACGATAC
EX773548       --> ..................................................
FD988144       --> ..................................................
FD970304       --> ..................................................
EY905623       --> ..................................................
FD988931       --> ..................................................

               201    -    251
UN13891        --> TTGATCCAGCCGTACTCCCGGAGTAGTAACGGAGGTGGTCTTCTTCCCGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532635       <-- TTGATCCAGCCGTACTCCCGGAGTAGTAACGGAGGTGGTCTTCTTCCCGT
EV544601       <-- TTGATCCAGCCGTACTCCCGGAGTAGTAACGGAGGTGGTCCTCTTCCCGT
FD984090       <-- TTGATCCAGCCGTACTCCCGGAGTAGTAACGGAGGTGGTCTTCTTCCCGT
EY936336       <-- TTGATCCAGCCGTACTCCCGGAGTAGTAACGGAGGTGGTCTTCTTCCCGT
EX769091       <-- TTGATCCAGCCGTACTCCCGGAGTAGTAACGGAGGTGGTCTTCTTCCCGT
EX901118       <-- TTGATCCAGCCGTACTCCCGGAGTAGTAACGGAGGTGGTCTTCTTCCCGT
EX768997       <-- TTGATCCAGCCGTACTCCCGGAGTAGTAACGGAGGTGGTCTTCTTCCCGT
EX777348       <-- TTGATCCAGCCGTACTCCCGGAGTAGTAACGGAGGTGGTCTTCTTCCCGT
FD966704       <-- TTGATCCAGCCGTACTCCCGGAGTAGTAACGGAGGTGGT-TTCTTCCCGT
EY901984       <-- TTGATCCAGCCGTACTCCCGGAGTAGTAACGGAGGTGGTCTTCTTCCCGT
FD984778       <-- ............TACTCCCGGAGTAGTAACGGAGGTGGTCTTCTTCCCGT
EY902014       <-- ..............CTCCCGGAGTAGTAACGGAGGTGGTCTTCTTCCCGT
FD536801       <-- ..................CGGAGTAGTAACGGAGGTGGTCTTCTTCCCGT
EY895687       <-- ................................AGGTGGTCTTCTTCCCGT
FD974831       <-- ..................................................
EX761312       <-- ..................................................
EX761513       <-- ..................................................
EY902561       <-- ..................................................
EY902358       <-- ..................................................
FD968931       <-- ..................................................
EV542951       <-- ..................................................
FD538170       <-- ..................................................
EY903534       <-- ..................................................
EV528722       --> TTGATCCAGCCGTACTCCCGGAGTAGTAACGGAGGTGGTCTTCTTCCCGT
EY906373       --> TTGATCCAGCCGTACTCCCGGAGTAGTAACGGAGGTGGTCTTCTTCCCGT
EY940603       --> TTGATCCAGCCGTACTCCCGGAGTAGTAACGGAGGTGGTCTTCTTCCCGT
FD978625       --> TTGATCCAGCCGTACTCCCGGAGTAGTAACGGAGGTGGTCTTCTTCCCGT
EX757827       --> TTGATCCAGCCGTACTCCCGGAGTAGTAACGGAGGTGGTCTTCTTCCCGT
EX765205       --> TTGATCCAGCCGTACTCCCGGAGTAGTAACGGAGGTGGTCTTCTTCCCGT
EX765294       --> TTGATCCAGCCGTACTCCCGGAGTAGTAACGGAGGTGGTCTTCTTCCCGT
EX897343       --> TTGATCCAGCCGTACTCCCGGAGTAGTAACGGAGGTGGTCTTCTTCCCGT
EY900043       --> TTGATCCAGCCGTACTCCCGGAGTAGTAACGGAGGTGGTCTTCTTCCCGT
EY905584       --> TTGATCCAGCCGTACTCCCGGAGTAGTAACGGAGGTGGTCTTCTTCCCGT
EY907649       --> TTGATCCAGCCGTACTCCCGGAGTAGTAACGGAGGTGGTCTTCTTCCCGT
FD540270       --> TTGATCCAGCCGTACTCCCGGAGTAGTAACGGAGGTGGTCTTCTTCCCGT
FD542006       --> TTGATCCAGCCGTACTCCCGGAGTAGTAACGGAGGTGGTCTTCTTCCCGT
FD973196       --> TTGATCCAGCCGTACTCCCGGAGTAGTAACGGAGGTGGTCTTCTTCCCGT
FD988155       --> TTGATCCAGCCGTACTCCCGGAGTAGTAACGGAGGTGGTCTTCTTCCCGT
EX758079       --> TTGATCCAGCCGTACTCCCGGAGTAGTAACGGAGGTGGTCTTCTTCCCGT
EV539072       --> TTGATCCAGCCGTACTCCCGGAGTAGTAACGGAGGTGGTCTTCTTCCCGT
EV549043       --> TTGATCCAGCCGTACTCCCGGAGTAGTAACGGAGGTGGTCCTCTTCCCGT
EY906079       --> TTGATCCAGCCGTACTCCCGGAGTAGTAACGGAGGTGGTCTTCTTCCCGT
EY907754       --> TTGATCCAGCCGTACTCCCGGAGTAGTAACGGAGGTGGTCTTCTTCCCGT
FD557910       --> TTGATCCAGCCGTACTCCCGGAGTAGTAACGGAGGTGGTCTTCTTCCCGT
FY434706       --> TTGATCCAGCCGTACTCCCGGAGTAGTAACGGAGGTGGTCTTCTTCCCGT
EX773548       --> .......AGCCGTACTCCCGGAGTAGTAACGGAGGTGGTCTTCTTCCCGT
FD988144       --> ..............gTCCCGGAGTAGTAACGGAGGTGGTCTTCTTCCCGT
FD970304       --> ........................................TTCTTCCCGT
EY905623       --> ..................................................
FD988931       --> ..................................................

               251    -    301
UN13891        --> CCCCGTTAAACTACTTCCCCTTT-GTCCACTTGGCATCAGCCAATCCTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532635       <-- CCCCGTTAAACTACTTCCCCTTT-GTCCACTTGGCATCAGCCAATCCTCG
EV544601       <-- CCCCGTTAAACTACTTCCCCTTT-GTCCACTTGGCATCAGCCAATCCTCG
FD984090       <-- CCCCGTTAAACTACTTCCCCTTT-GTCCACTTGGCATCAGCCAATCCTCG
EY936336       <-- CCCCGTTAAACTACTTCCCCTTT-GTCCACTTGGCATCAGCCAATCCTCG
EX769091       <-- CCCCGTTAAACTACTTCCCCTTT-GTCCACTTGGCATCAGCCAATCCTCG
EX901118       <-- CCCCGTTAAACTACTTCCCCTTT-GTCCACTTGGCATCAGCCAATCCTCG
EX768997       <-- CCCCGTTAAACTACTTCCCCTTT-GTCCACTTGGCATCAGCCAATCCTCG
EX777348       <-- CCCCGTTAAACTACTTCCCCTTT-GTCCACTTGGCATCAGCCAATCCTCG
FD966704       <-- CCCCGTTAAACTACTTCCCCTTT-GTCCACTTGGCATCAGCCAATCCTCG
EY901984       <-- CCCCGTTAAACTACTTCCCCTTT-GTCCACTTGGCATCAGCCAATCCTCG
FD984778       <-- CCCCGTTAAACTACTTCCCCTTT-GTCCACTTGGCATCAGCCAATCCTCG
EY902014       <-- CCCCGTTAAACTACTTCCCCTTT-GTCCACTTGGCATCAGCCAATCCTCG
FD536801       <-- CCCCGTTAAACTACTTCCCCTTT-GTCCACTTGGCATCAGCCAATCCTCG
EY895687       <-- CCCCGTTAAACTACTTCCCCTTT-GTCCACTTGGTATCAGCCAATCCTCG
FD974831       <-- CCCCGTTAAACTACTTCCCCTTT-GTCCACTTGGCATCAGCCAATCCTCG
EX761312       <-- .CCCGTTAAACTACTTCCCCTTT-GTCCACTTGGCATCAGCCAATCCTCG
EX761513       <-- .CCCGTTAAACTACTTCCCCTTT-GTCCACTTGGCATCAGCCAATCCTCG
EY902561       <-- ...............cCCCCTTT-GTCCACTTGGCATCAGCCAATCCTCG
EY902358       <-- ..................................CATCAGCCAATCCTCG
FD968931       <-- ..................................................
EV542951       <-- ..................................................
FD538170       <-- ..................................................
EY903534       <-- ..................................................
EV528722       --> CCCCGTTAAACTACTTCCCCTTT-GTCCACTTGGCATCAGCCAATCCTCG
EY906373       --> CCCCGTTAAACTACTCCCCCTTT-GTCCACTTGGCATCAGCCAATCCTCG
EY940603       --> CCCCGTTAAACTACTTCCCCTTT-GTCCACTTGGCATCAGCCAATCCTCG
FD978625       --> CCCCGTTAAACTACTTCCCCTTT-GTCCACTTGGCATCAGCCAATCCTCG
EX757827       --> CCCCGTTAAACTACTTCCCCTTT-GTCCACTTGGCATCAGCCAATCCTCG
EX765205       --> CCCCGTTAAACTACTTCCCCTTT-GTCCACTTGGCATCAGCCAATCCTCG
EX765294       --> CCCCGTTAAACTACTTCCCCTTT-GTCCACTTGGCATCAGCCAATCCTCG
EX897343       --> CCCCGTTAAACTACTTCCCCTTT-GTCCACTTGGCATCAGCCAATCCTCG
EY900043       --> CCCCGTTAAACTACTTCCCCTTT-GTCCACTTGGTATCAGCCAATCCTCG
EY905584       --> CCCCGTTAAACTACTTCCCCTTT-GTCCACTTGGCATCAGCCAATCCTCG
EY907649       --> CCCCGTTAAACTACTTCCCCTTT-GTCCACTTGGCATCAGCCAATCCTCG
FD540270       --> CCCCGTTAAACTACTTCCCCTTT-GTCCACTTGGCATCAGCCAATCCTCG
FD542006       --> CCCCGTTAAACTACTTCCCCTTT-GTCCACTTGGCATCAGCCAATCCTCG
FD973196       --> CCCCGTTAAACTACTTCCCCTTT-GTCCACTTGGCATCAGCCAATCCTCG
FD988155       --> CCCCGTTAAACTACTTCCCCTTT-GTCCACTTGGCATCAGCCAATCCTCG
EX758079       --> CCCCGTTAAACTACTTCCCCTTT-GTCCACTTGGCATCAGCCAATCCTCG
EV539072       --> CCCCGTTAAACTACTTCCCCTTT-GTCCACTTGGCATCAGCCAATCCTCG
EV549043       --> CCCCGTTAAACTACTTCCCCTTT-GTCCACTTGGCATCAGCCAATCCTCG
EY906079       --> CCCCGTTAAACTACTTCCCCTTT-GTCCACTTGGCATCAGCCAATCCTCG
EY907754       --> CCCCGTTAAACTACTTCCCCTTT-GTCCACTTGGCATCAGCCAATCCTCG
FD557910       --> CCCCGTTAAACTACTTCCCCTTT-GTCCACTTGGCATCAGCCAATCCTCG
FY434706       --> CCCCGTTAAACTACTTCCCCTTT-GTCCACTTGGCATCAGCCAATCCTCG
EX773548       --> CCCCGTTAAACTACTTCCCCTTTCGTCCACTTGGCATCAGCCAATCCTCG
FD988144       --> CCCCGTTAAACTACTTCCCCTTT-GTCCACTTGGCATCAGCCAATCCTCG
FD970304       --> CCCCGTTAAACTACTTCCCCTTT-GTCCACTTGGCATCAGCCAATCCTCG
EY905623       --> CCCCGTTAAACTACTTCCCCTTT-GTCCACTTGGCATCAGCCAATCCTCG
FD988931       --> ..................................................

               301    -    351
UN13891        --> GTTACAGCCTTACCAGGCCTACCAGTTAGCTT-CTCATATCCATACGCGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532635       <-- GTTACAGCCTTACCAGGCCTACCAGTTAGCTT-CTCATATCCATACGCGC
EV544601       <-- GTTACAGCCTTACCAGGCCTGCCAGTTAGCTT-CTCATATCCATACGCGC
FD984090       <-- GTTACAGCCTTACCAGGCCTACCAGTTAGCTT-CTCATATCCATACGCGC
EY936336       <-- GTTACAGCCTTACCAGGCCTACCAGTTAGCTT-CTCATATCCATACGCGC
EX769091       <-- GTTACAGCCTTACCAGGCCTACCAGTTAGCTT-CTCATATCCATACGCGC
EX901118       <-- GTTACAGCCTTACCAGGCCTACCAGTTAGCTT-CTCATATCCATACGCGC
EX768997       <-- GTTACAGCCTTACTAGGCCTACCAGTTAGCTT-CTCATATCCATACGCGC
EX777348       <-- GTTACAGCCTTACCAGGCCTACCAGTTAGCTT-TTCATATCCATACGCGC
FD966704       <-- GTTACAGCCTTACCAGGCCTACCAGTTAGCTT-CTCATATCCATACGCGC
EY901984       <-- GTTACAGCCTTACCAGGCCTACCAGTTAGCTT-CTCATATCCATACGCGC
FD984778       <-- GTTACAGCCTTACCAGGCCTACCAGTTAGCTT-CTCATATCCATACGCGC
EY902014       <-- GTTACAGCCTTACCAGGCCTACCAGTTAGCTT-CTCATATCCATACGCGC
FD536801       <-- GTTACAGCCTTACCAGGCCTACCAGTTAGCTT-CTCATATCCATACGCGC
EY895687       <-- GTTACAGCCTTACCAGGCCTACCAGTTAGCTT-CTCATATCCATACGCGC
FD974831       <-- GTTACAGCCTTACCAGGCCTGCCAGTTAGCTT-CTCATATCCATACGCGC
EX761312       <-- GTTACAGCCTTACCAGGCCTACCAGTTAGCTT-CTCATATCCATACGCGC
EX761513       <-- GTTACAGCCTTACCAGGCCTACCGGTTAGCTT-CTCATATCCATACGCGC
EY902561       <-- GTTACAGCCTTACCAGGCCTACCAGTTAGCTT-CTCATATCCATACGCGC
EY902358       <-- GTTACAGCCTTACCAGGCCTACCAGTTAGCTT-CTCATATCCATACGCGC
FD968931       <-- .....................................TATCCATACGCGC
EV542951       <-- ..................................................
FD538170       <-- ..................................................
EY903534       <-- ..................................................
EV528722       --> GTTACAGCCTTACCAGGCCTACCAGTTAGCTT-CTCATATCCATACGCGC
EY906373       --> GTTACAGCCTTACCAGGCCTACCAGTTAGCTT-CTCATATCCATACGCGC
EY940603       --> GTTACAGCCTTACCAGGCCTACCAGTTAGCTT-CTCATATCCATACGCGC
FD978625       --> GTTACAGCCTTACCAGGCCTGCCAGTTAGCTT-CTCATATCCATACGCGC
EX757827       --> GTTACAGCCTTACCAGGCCTACCAGTTAGCTT-CTCATATCCATACGCGC
EX765205       --> GTTACAGCCTTACTAGGCCTACCAGTTAGCTT-CTCATATCCATACGCGC
EX765294       --> GTTACAGCCTTACCAGGCCTACCAGTTAGCTT-CTCATATCCATACGCGC
EX897343       --> GTTACAGCCTTACCAGGCCTACCAGTTAGCTT-CTCATATCCATACGCGC
EY900043       --> GTTACAGCCTTACCAGGCCTACCAGTTAGCTT-CTCATATCCATACGCGC
EY905584       --> GTTACAGCCTTACCAGGCCTACCAGTTAGCTT-CTCATATCCATACGCGC
EY907649       --> GTTACAGCCTTACCAGGCCTACCAGTTAGCTT-CTCATATCCATACGCGC
FD540270       --> GTTACAGCCTTACCAGGCCTACCAGTTAGCTT-CTCATATCCATACGCGC
FD542006       --> GTTACAGCCTTACCAGGCCTACCAGTTAGCTT-CTCATATCCATACGCGC
FD973196       --> GTTACAGCCTTACCAGGCCTACCAGTTAGCTT-CTCATATCCATACGCGC
FD988155       --> GTTACAGCCTTACCAGGCCTACCAGTTAGCTT-CTCATATCCATACGCGC
EX758079       --> GTTACAGCCTTACCAGGCCTACCGGTTAGCTT-CTCATATCCATACGCGC
EV539072       --> GTTACAGCCTTACCAGGCCTACCAGTTAGCTT-CTCATATCCATACGCGC
EV549043       --> GTTACAGCCTTACCAGGCCTGCCAGTTAGCTT-CTCATATCCATACGCGC
EY906079       --> GTTACAGCCTTACCAGGCCTACCAGTTAGCTT-CTCATATCCATACGCGC
EY907754       --> GTTACAGCCTTACCAGGCCTACCAGTTAGCTT-CTCATATCCATACGCGC
FD557910       --> GTTACAGCCTTACCAGGCCTACCAGTTAGCTT-CTCATATCCATACGCGC
FY434706       --> GTTACAGCCTTACCAGGCCTACCAGTTAGCTT-CTCATATCCATACGCGC
EX773548       --> GTTACAGCCTTACCAGGCCTACCAGTTAGCTTTCTCATATCCATACGCGC
FD988144       --> GTTACAGCCTTACCAGGCCTACCAGTTAGCTT-CTCATATCCATACGCGC
FD970304       --> GTTACAGCCTTACCAGGCCTACCAGTTAGCTT-CTCATATCCATACGCGC
EY905623       --> GTTACAGCCTTACCAGGCCTACCAGTTAGCTT-CTCATATCCATACGCGC
FD988931       --> ..................................................

               351    -    401
UN13891        --> TCATGGACACCTATGTTAACGAAGGG-CAAGCTGTAAATATCGAGTTTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532635       <-- TCATGGACACCTATGTTAACGAAGGG-CAAGCTGTAAATATCGAGTTTAG
EV544601       <-- TCATGGACACCTATGTTAACGAAGGG-CAAGCTGTAAATATCGAGTTTAG
FD984090       <-- TCATGGACACCTATGTTAACGAAGGG-CAAGCTGTAAATATCGAGTTTAG
EY936336       <-- TCATGGACACCTATGTTAACGAAGGG-CAAGCTGTAAATATCGAGTTTAG
EX769091       <-- TCATGGGCACCTATGTTAACGAAGGG-CAAGCTGTAAATATCGAGTTTAG
EX901118       <-- TCATGGACACCTATGTTAACGAAGGG-CAAGCTGTAAATATCGAGTTTAG
EX768997       <-- TCATGGACACCTATGTTAACGAAGGG-CAAGCTGTAAATATCGAGTTTAG
EX777348       <-- TCATGGACACCTATGTTAACGAAGGG-CAAGCTGTAAATATCGAGTTTAG
FD966704       <-- TCATGGACACCTATGTTAACGAAGGG-CAAGCTGTAAATATCGAGTTTAG
EY901984       <-- TCATGGACACCTATGTTAACGAATGG-CAAGCTGTAAATATCGAGTTTAG
FD984778       <-- TCATGGACACCTATGTTAACGAAGGG-CAAGCTGTAAATATCGAGTTTAG
EY902014       <-- TCATGGACACCTATGTTAACGAAGGG-CAAGCTGTAAATATCGAGTTTAG
FD536801       <-- TCATGGACACCTATGTTAACGAAGGG-CAAGCTGTAAATATCGAGTTTAG
EY895687       <-- TCATGGACACCTATGTTAACGAAGGG-CAAGCTGTAAATATCGAGTTTAG
FD974831       <-- TCATGGACACCTATGTTAACGAAGGG-CAGGCTGTAAATATCGAGTTTAG
EX761312       <-- TCATGGACACCTATGTTAACGAAGGG-CAAGCTGTAAATATCGAGTTTAG
EX761513       <-- TCATGGACACCTATGTTAACGAAGGG-CAAGCTGTAAATATCGAGTTTAG
EY902561       <-- TCATGGACACCTATGTTAACGAAGGG-CAAGCTGTAAATATCGAGTTTAG
EY902358       <-- TCATGGACACCTATGTTAACGAAGGG-CAAGCTGTAAATATCGAGTTTAG
FD968931       <-- TCATGGACACCTATGTTAATGAAGGG-CAAGCTGTAAATATCGAGTTTAG
EV542951       <-- ..................................................
FD538170       <-- ..................................................
EY903534       <-- ..................................................
EV528722       --> TCATGGACACCTATGTTAACGAAGGG-CAAGCTGTAAATATCGAGTTTAG
EY906373       --> TCATGGACACCTATGTTAACGAAGGG-CAAGCTGTAAATATCGAGTTTAG
EY940603       --> TCATGGACACCTATGTTAACGAAGGG-CAAGCTGTAAATATCGAGTTTAG
FD978625       --> TCATGGACACCTATGTTAACGAAGGG-CAAGCTGTAAATATCGAGTTTAG
EX757827       --> TCATGGACACCTATGTTAACGAAGGG-CAAGCTGTAAATATCGAGTTTAG
EX765205       --> TCATGGACACCTATGTTAACGAAGGG-CAAGCTGTAAATATCGAGTTTAG
EX765294       --> TCATGGGCACCTATGTTAACGAAGGG-CAAGCTGTAAATATCGAGTTTAG
EX897343       --> TCATGGACACCTATGTTAACGAAGGG-CAAGCTGTAAATATCGAGTTTAG
EY900043       --> TCATGGACACCTATGTTAACGAAGGG-CAAGCTGTAAATATCGAGTTTAG
EY905584       --> TCATGGACACCTATGTTAACGAATGG-CAAGCTGTAAATATCGAGTTTAG
EY907649       --> TCATGGACACCTATGTTAACGAAGGG-CAAGCTGTAAATATCGAGTTTAG
FD540270       --> TCATGGACACCTATGTTAACGAAGGG-CAAGCTGTAAATATCGAGTTTAG
FD542006       --> TCATGGACACCTATGTTAACGAAGGG-CAAGCTGTAAATATCGAGTTTAG
FD973196       --> TCATGGACACCTATGTTAATGAAGGG-CAAGCTGTAAATATCGAGTTTAG
FD988155       --> TCATGGACACCTATGTTAACGAAGGG-CAAGCTGTAAATATCGAGTTTAG
EX758079       --> TCATGGACACCTATGTTAACGAAGGG-CAAGCTGTAAATATCGAGTTTAG
EV539072       --> TCATGGACACCTATGTTAACGAAGGG-CAAGCTGTAAATATCGAGTTTAG
EV549043       --> TCATGGACACCTATGTTAACGAAGGG-CAAGCTGTAAATATCGAGTTTAG
EY906079       --> TCATGGACACCTATGTTAACGAAGGG-CAAGCTGTAAATATCGAGTTTAG
EY907754       --> TCATGGACACCTATGTTAACGAAGGG-CAAGCTGTAAATATCGAGTTTAG
FD557910       --> TCATGGACACCTATGTTAACGAAGGG-CAAGCTGTAAATATCGAGTTTAG
FY434706       --> TCATGGACACCTATGTTAACGAAGGG-CAAGCTGTAAATATCGAGTTTAG
EX773548       --> TCATGGACACCTATGTTAACGAAGGG-CAAGCTGTAAATATCGAGTTTAG
FD988144       --> TCATGGACACCTATGTTAACGAAGGG-CAAGCTGTAAATATCGAGTTTAG
FD970304       --> TCATGGACACCTATGTTAACGAAGGGGCAAGCTGTAAATATCGAGTTTAG
EY905623       --> TCATGGACACCTATGTTAACGAAGGG-CAAGCTGTAAATATCGAGTTTAG
FD988931       --> ..................................................

               401    -    451
UN13891        --> GTCCGACTTTAGGTCGGAAGCATGGCCGGGATGCGAGGAGTTTTCCAAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532635       <-- GTCCGACTTTAGGTCGGAAGCATGGCCGGGATGCGAGGAGTTTTCCAAGT
EV544601       <-- GTCCGACTTTAGGTCGGAAGCATGGCCGGGATGCGAGGAGTTTTCCAAGT
FD984090       <-- GTCCGACTTTAGGTCGGAAGCATGGCCGGGATGCGAGGAGTTTTCCAAGT
EY936336       <-- GTCCGACTTTAGGTCGGAAGCATGGCCGGGATGCGAGGAGTTTTCCAAGT
EX769091       <-- GTCCGACTTTAGGTCGGAAGCATGGCCGGGATGCGAGGAGTTTTCCAAGT
EX901118       <-- GTCCGACTTTAGGTCGGAAGCATGGCCGGGATGCGAGGAGTTTTCCAAGT
EX768997       <-- GTCCGACTTTAGGTCGGAAGCATGGCCGGGATGCGAGGAGTTTTCCAAGT
EX777348       <-- GTCCGACTTTAGGTCGGAAGCATGGCCGGGATGCGAGGAGTTTTCCAAGT
FD966704       <-- GTCCGACTTTAGGTCGGAAGCATGGCCGGGATGCGAGGAGTTTTCCAAGT
EY901984       <-- GTCCGACTTTAGGTCGGAAGCATGGCCGGGATGCGAGGAGTTTTCCAAGT
FD984778       <-- GTCCGACTTTAGGTCGGAAGCATGGCCGGGATGCGAGGAGTTTTCCAAGT
EY902014       <-- GTCCGACTTTAGGTCGGAAGCATGGCCGGGATGCGAGGAGTTTTCCAAGT
FD536801       <-- GTCCGACTTTAGGTCGGAAGCATGGCCGGGATGCGAGGAGTTTTCCAAGT
EY895687       <-- GTCCGACTTTAGGTCGGAAGCATGGCCGGGATGCGAGGAGTTTTCCAAGT
FD974831       <-- GTCCGACTTTAGGTCGGAAGCATGGCCGGGATGCGAGGAGTTTTCCAAGT
EX761312       <-- GTCCGACTTTAGGTCGGAAGCATGGCCGGGATGCGAGGAGTTTTCCAAGT
EX761513       <-- GTCCGACTTTAGGTCGGAAGCATGGCCGGGATGCGAGGAGTTTTCCAAGT
EY902561       <-- GTCCGACTTTAGGTCGGAAGCATGGCCGGGATGCGAGGAGTTTTCCAAGT
EY902358       <-- GTCCGACTTTAGGTCGGAAGCATGGCCGGGATGCGAGGAGTTTTCCAAGT
FD968931       <-- GTCCGACTTTAGGTCGGAAGCATGGCCGGGATGCGAGGAGTTTTCCAAGT
EV542951       <-- ..................AGCATGGCCGGGATGCGAGGAGTTTTCCAAGT
FD538170       <-- ..................................................
EY903534       <-- ..................................................
EV528722       --> GTCCGACTTTAGGTCGGAAGCATGGCCGGGATGCGAGGAGTTTTCCAAGT
EY906373       --> GTCCGACTTTAGGTCGGAAGCATGGCCGGGATGCGAGGAGTTTTCCAAGT
EY940603       --> GTCCGACTTTAGGTCGGAAGCATGGCCGGGATGCGAGGAGTTTTCCAAGT
FD978625       --> GTCCGACTTTAGGTCGGAAGCATGGCCGGGATGCGAGGAGTTTTCCAAGT
EX757827       --> GTCCGACTTTAGGTCGGAAGCATGGCCGGGATGCGAGGAGTTTTCCAAGT
EX765205       --> GTCCGACTTTAGGTCGGAAGCATGGCCGGGATGCGAGGAGTTTTCCAAGT
EX765294       --> GTCCGACTTTAGGTCGGAAGCATGGCCGGGATGCGAGGAGTTTTCCAAGT
EX897343       --> GTCCGACTTTAGGTCGGAAGCATGGCCGGGATGCGAGGAGTTTTCCAAGT
EY900043       --> GTCCGACTTTAGGTCGGAAGCATGGCCGGGATGCGAGGAGTTTTCCAAGT
EY905584       --> GTCCGACTTTAGGTCGGAAGCATGGCCGGGATGCGAGGAGTTTTCCAAGT
EY907649       --> GTCCGACTTTAGGTCGGAAGCATGGCCGGGATGCGAGGAGTTTTCCAAGT
FD540270       --> GTCCGACTTTAGGTCGGAAGCATGGCCGGGATGCGAGGAGTTTTCCAAGT
FD542006       --> GTCCGACTTTAGGTCGGAAGCATGGCCGGGATGCGAGGAGTTTTCCAAGT
FD973196       --> GTCCGACTTTAGGTCGGAAGCATGGCCGGGATGCGAGGAGTTTTCCAAGT
FD988155       --> GTCCGACTTTAGGTCGGAAGCATGGCCGGGATGCGAGGAGTTTTCCAAGT
EX758079       --> GTCCGACTTTAGGTCGGAAGCATGGCCGGGATGCGAGGAGTTTTCCAAGT
EV539072       --> GTCCGACTTTAGGTCGGAAGCATGGCCGGGATGCGAGGAGTTTTCCAAGT
EV549043       --> GTCCGACTTTAGGTCGGAAGCATGGCCGGGATGCGAGGAGTTTTCCAAGT
EY906079       --> GTCCGACTTTAGGTCGGAAGCATGGCCGGGATGCGAGGAGTTTTCCAAGT
EY907754       --> GTCCGACTTTAGGTCGGAAGCATGGCCGGGATGCGAGGAGTTTTCCAAGT
FD557910       --> GTCCGACTTTAGGTCGGAAGCATGGCCGGGATGCGAGGAGTTTTCCAAGT
FY434706       --> GTCCGACTTTAGGTCGGAAGCATGGCCGGGATGCGAGGAGTTTTCCAAGT
EX773548       --> GTCCG.............................................
FD988144       --> GTCCGACTTTAGGTCGGAAGCATGGCCGGGATGCGAGGAGTTTTCCAAGT
FD970304       --> GTCCGACTTTAGGTCGGAAGCATGGCCGGGATGCGAGGAGTTTTCCAAGT
EY905623       --> GTCCGACTTTAGGTCGGAAGCATGGCCGGGATGCGAGGAGTTTTCCAAGT
FD988931       --> .......TTTAGGTCGGAAGCATGGCCGGGATGCGAGGAGTTTTCCAAGT

               451    -    501
UN13891        --> ACTGGGAAGTAGATGAAT-CCTCATCGGCTTCCGAGGAGCCTGCGATTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532635       <-- ACTGGGAAGTAGATGAAT-CCTCATCGGCTTCCGAGGAGCCTGCGATTCT
EV544601       <-- ACTGGGAAGTAGATGAAT-CCTCATCGGCTTCCGAGGAGCCTGCGATTCT
FD984090       <-- ACTGGGAAGTAGATGAAT-CCTCATCGGCTTCCGAGGAGCCTGCGATTTT
EY936336       <-- ACTGGGAAGTAGATGAAT-CCTCATCGGCTTCCGAGGAGCCTGCGATTCT
EX769091       <-- ACTGGGAAGTAGATGAAT-CCTCATCGGCTTCCGAGGAGCCTGCGATTCT
EX901118       <-- ACTGGGAAGTAGATGAAT-CCTCATCGGCTTCCGAGGAGCCTGCGATTCT
EX768997       <-- ACTGGGAAGTAGATGAAT-CCTCATCGGCTTCCGAGGAGCCTGCGATTTT
EX777348       <-- ACTGGGAAGTAGATGAAT-CCTCATCGGCTTCCGAGGAGCCTGCGATTCT
FD966704       <-- ACTGGGAAGTAGATGAAT-CCTCATCGGCTTCCGAGGAGCCTGCGATTCT
EY901984       <-- ACTGGGAAGTAGATGAAT-CCTCGTCGGCTTCCGAGGAGCCTGCGATTTT
FD984778       <-- ACTGGGAAGTAGATGAAT-CCTCATCGGCTTCCGAGGAGCCTGCGATTCT
EY902014       <-- ACTGGGAAGTAGATGAAT-CCTCATCGGCTTCCGAGGAGCCTGCGATTCT
FD536801       <-- ACTGGGAAGTAGATGAAT-CCTCATCGGCTTCCGAGGAGCCTGCGATTTT
EY895687       <-- ACTGGGAAGTAGATGAAT-CCTCATCGGCTTCCGAGGAGCCTGCGATTCT
FD974831       <-- ACTGGGAAGTAGATGAAT-CCTCATCGGCTTCCGAGGAGCCTGCGATTCT
EX761312       <-- ACTGGGAAGTAGATGAAT-CCTCATCGGCTTCCGAGGAGCCTGCGATTCT
EX761513       <-- ACTGGGAAGTAGATGAAT-CCTCATCGGCTTCCGAGGAGCCTGCGATTCT
EY902561       <-- ACTGGGAAGTAGATGAAT-CCTCATCGGCTTCCGAGGAGCCTGCGATTCT
EY902358       <-- ACTGGGAAGTAGATGAAT-CCTCATCGGCTTCCGAGGAGCCTGCGATTCT
FD968931       <-- ACTGGGAAGTAGATGAAT-CCTCATCGGCTTCCGAGGAGCCTGCGATTCT
EV542951       <-- ACTGGGAAGTAGATGAAT-CCTCATCGGCTTCGGAGGAGCCTGCGATTTT
FD538170       <-- ..........................................GCGATTCT
EY903534       <-- ..............................................TTCT
EV528722       --> ACTGGGAAGTAGATGAAT-CCTCATCGGCTTCCGAGGAGCCTGCGATTCT
EY906373       --> ACTGGGAAGTAGATGAAT-CCTCATCGGCTTCCGAGGAGCCTGCGATTCT
EY940603       --> ACTGGGAAGTAGATGAAT-CCTCATCGGCTTCCGAGGAGCCTGCGATTCT
FD978625       --> ACTGGGAAGTAGATGAAT-CCTCATCGGCTTCCGAGGAGCCTGCGATTCT
EX757827       --> ACTGGGAAGTAGATGAAT-CCTCATCGGCTTCCGAGGAGCCTGCGATTCT
EX765205       --> ACTGGGAAGTAGATGAAT-CCTCATCGGCTTCCGAGGAGCCTGCGATTCT
EX765294       --> ACTGGGAAGTAGATGAAT-CCTCATCGGCTTCCGAGGAGCCTGCGATTCT
EX897343       --> ACTGGGAAGTAGATGAAT-CCTCATCGGCTTCCGAGGAGCCTGCGATTCT
EY900043       --> ACTGGGAAGTAGATGAAT-CCTCATCGGCTTCCGAGGAGCCTGCGATTCT
EY905584       --> ACTGGGAAGTAGATGAAT-CCTCGTCGGCTTCCGAGGAGCCTGCGATTCT
EY907649       --> ACTGGGAAGTAGATGAAT-CCTCATCGGCTTCCGAGGAGCCTGCGATTCT
FD540270       --> ACTGGGAAGTAGATGAAT-CCTCATCGGCTTCCGAGGAGCCTGCGATTCT
FD542006       --> ACTGGGAAGTAGATGAAT-CCTCATCGGCTTCCGAGGAGCCTGCGATTCT
FD973196       --> ACTGGGAAGTAGATGAAT-CCTCATCGGCTTCCGAGGAGCCTGCGATTCT
FD988155       --> ACTGGGAAGTAGATGAAT-CCTCATCGGCTTCCGAGGAGCCTGCGATTCT
EX758079       --> ACTGGGAAGTAGATGAAT-CCTCATCGGCTTCCGAGGAGCCTGCGATTCT
EV539072       --> ACTGGGAAGTAGATGAAT-CCTCATCGGCTTCCGAGGAGCCTGCGATTCT
EV549043       --> ACTGGGAAGTAGATGAAT-CCTCATCGGCTTCCGAGGAGCCTGCGATTCT
EY906079       --> ACTGGGAAGTAGATGAAT-CCTCATCGGCTTCCGAGGAGCCTGCGATTCT
EY907754       --> ACTGGGAAGTAGATGAAT-CCTCATCGGCTTCCGAGGAGCCTGCGATTCT
FD557910       --> ACTGGGAAGTAGATGAAT-CCTCATCGGCTTCCGAGGAGCCTGCGATTCT
FY434706       --> ACTGGGAAGTAGATGAAT-CCTCATCGGCTTCCGAGGAGCCTGCGATTCT
EX773548       --> ..................................................
FD988144       --> ACTGGGAAGTAGATGAAT-CCTCATCGGCTTCCGAGGAGCCTGCGATTCT
FD970304       --> ACTGGGAAGTAGATGAAT-CCTCATCGGCTTCCGAGGAGCCTGCGATTCT
EY905623       --> ACTGGGAAGTAGATGAAT-CCTCATCGGCTTCCGAGGAGCCTGCGATTCT
FD988931       --> ACTGGGAAGTAGATGAATTCCTCATCGGCTTCCGAGGAGCCTGCGATTCT

               501    -    551
UN13891        --> CATT-GGTGGTAAGAAGCAGGAACGAAACAGCTGGTTTAAAATTGAGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532635       <-- CGTC-GGTGGTAAGAAGCAGGAACGAAACAGCTGGTTTAAAATTGAGAGA  Raphanus raphanistrum subsp. maritimus
EV544601       <-- CATT-GGTGGTAAGAAGTAGGAACGAAACGGCTGGTTTAAAATTGAGAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD984090       <-- CATT-GGTGGTAAGAAGCAGGAACGAAACAGCTGGTTTAAAATTGAGAGA  Raphanus raphanistrum subsp. landra
EY936336       <-- CATT-GGTGGTAAGAAGCAGGAACGAAACAGCTGGTTTAAAATTGAGAGA  Raphanus sativus cv Early Scarlet Globe
EX769091       <-- CATT-GGTGGTAAGAAGCAGGAACGAAACAGCTGGTTTAAAATTGAGAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX901118       <-- CATT-GGTGGTAAGAAGCAGGAACGAAACAGCTGGTTTAAAATTGAGAGA  Raphanus sativus cv Early Scarlet Globe
EX768997       <-- CGTC-GGTGGTAAGAAGCAGGAACGAAACAGCTGGTTTAAAATTGAGAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX777348       <-- CATT-GGTGGTAAGAAGCAGGAACGAAACAGCTGGTTTAAAATTGAGAGA  Raphanus raphanistrum subsp. landra
FD966704       <-- CATT-GGTGGTAAGAAGCAGGAACGAAACAGCTGGTTTAAAATTGAGAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY901984       <-- CATT-GGTGGTAAGAAGCAGGAACGAAACAGCTGGTTTAAAATTGAGAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD984778       <-- CATT-GGTGGTAAGAAGCAGGAACGAAACAGCTGGTTTAAAATTGAGGGA  Raphanus raphanistrum subsp. landra
EY902014       <-- CATT-GGTGGTAAGAAGCAGGAACGAAACAGCTGGTTTAAAATTGAGAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD536801       <-- CATT-GGTGGTAAGAAGCAGGAACGAAACAGCTGGTTTAAAATTGAGAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY895687       <-- CGTC-GGTGGTAAGAAGCAGGAACGAAACAGCTGGTTTAAAATTGAGAGA  Raphanus raphanistrum subsp. maritimus
FD974831       <-- CATT-GGTGGTAAGAAGCAGGAACGAAACGGCTGGTTTAAAATTGAGAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX761312       <-- CATT-GGTGGTAAGAAGCAGGAACGAAACAGCTGGTTTAAAATTGAGAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX761513       <-- CATT-GGTGGTAAGAAGCAGGAACGAAACAGCTGGTTTAAAATTGAGAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY902561       <-- CATT-GGTGGTAAGAAGCAGGAACGAAACAGCTGGTTTAAAATTGAGAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY902358       <-- CATT-GGTGGTAAGAAGCAGGAACGAAACAGCTGGTTTAAAATTGAGAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD968931       <-- CATT-GGTGGTAAGAAGCAGGAACGAAACAGCTGGTTTAAAATTGAGAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542951       <-- CATT-GGTGGTAAGAAGCAGGAACGAAACAGCTGGTTTAAAATTGAGAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD538170       <-- CATT-GGTGGTAAGAAGCAGGAACGAAACAGCTGGTTTAAAATTGAGAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY903534       <-- CATT-GGTGGTAAGAAGCAGGAACGAAACAGCTGGTTTAAAATTGAGAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV528722       --> CGTC-GGTGGTAAGAAGCAGGAACGAAACAGCTGGTTTAAAATTGAGAGA  Raphanus raphanistrum subsp. maritimus
EY906373       --> CATT-GGTGGTAAGAAGCAGGAACGAAACAGCTGGTTTAAAATTGAGAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY940603       --> CATT-GGTGGTAAGAAGCAGGAACGAAACAGCTGGTTTAAAATTGAGAGA  Raphanus sativus cv Early Scarlet Globe
FD978625       --> CATT-GGTGGTAAGAAGCAGGAACGAAACGGCTGGTTTAAAATTGAGAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX757827       --> CATT-GGTGGTAAGAAGCAGGAACGAAACAGCTGGTTTAAAATTGAGAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX765205       --> CGTC-GGTGGTAAGAAGCAGGAACGAAACAGCTGGTTTAAAATTGAGAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX765294       --> CATT-GGTGGTAAGAAGCAGGAACGAAACAGCTGGTTTAAAATTGAGAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX897343       --> CATT-GGTGGTAAGAAGCAGGAACGAAACAGCTGGTTTAAAATTGAGAGA  Raphanus sativus cv Early Scarlet Globe
EY900043       --> CGTC-GGTGGTAAGAAGCAGGAACGAAACAGCTGGTTTAAAATTGAGAGA  Raphanus raphanistrum subsp. maritimus
EY905584       --> CATT-GGTGGTAAGAAGCAGGAACGAAACAGCTGGTTTAAAATTGAGAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY907649       --> CATT-GGTGGTAAGAA..................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD540270       --> CATT-GGTGGTAAGAAGCAGGAACGAAACAGCTGGTTTAAAATTGAGAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD542006       --> CATT-GGTGGTAAGAAGCAGGAACGAAACAGCTGGTTTAAAATTGAGAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD973196       --> CATT-GGTGGTAAGAAGCAGGAACGAAACAGCTGGTTTAAAATTGAGAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD988155       --> CATT-GGTGGTAAGAAGCAGGAACGAAACAGCTGGTTTAAAATTGAGAGA  Raphanus raphanistrum subsp. landra
EX758079       --> CATT-GGTGGTAAGAAGCAGGAACGAAACAGCTGGTTTAAAATTGAGAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV539072       --> CATT-GGTGGTAAGAAGCAGGAACGAAACAGCTGGTTTAAAATTGAGAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV549043       --> CATT-GGTGGTAAGAAGTAGGAACGAAACGGCTGGTTTAAAATTGAGAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY906079       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY907754       --> CATT-GGTGGTAAGAAGCAGGAACGAAACAGCTGGTTTAAAATT......  Raphanus raphanistrum subsp. raphanistrum (MS)
FD557910       --> CATT-GGTGGTAAGAAGCAGGAACGAAACAGCTGGTTTAAAATTGAGAGA  Raphanus raphanistrum subsp. landra
FY434706       --> CATT-GGTGGTAAGAAGCAGGAACGAAACAGCTGGTTTAAAATTGAGAGA  Raphanus sativus cv GSK3-1
EX773548       --> ..................................................  Raphanus raphanistrum subsp. landra
FD988144       --> CATT-GGTGGTAAGAAGCAGGAACGAAACAGCTGGTTTAAAATTGAGAGA  Raphanus raphanistrum subsp. landra
FD970304       --> CATT-GGTGGTAAGAAGCAGGAACGAAACAGCTGGTTTAAAATTGAGAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY905623       --> CATT-GGTGGTAAGAAGCAGGAACGAAACAGCTGGTTTAAAATTGAGAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD988931       --> CATTTGGTGGTAAGAAGCAGGAACGAAACAGCTGGTTTAAAATTGAGGGA  Raphanus raphanistrum subsp. landra

               551    -    601
UN13891        --> AAAGAAAAATTTGTTGGAGGAGTTGCTTACAAGTTGACCACCTTAACCGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532635       <-- AAAGAAAAATTTGTTGGAGGAGTTGCGTACAAGTTGAGCACCTTAACCGG  Raphanus raphanistrum subsp. maritimus
EV544601       <-- AAAGAAAAATTTGTTGGAGGAGTTGCTTACAAGTTGACCACCTTAACCGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD984090       <-- AAAGAAAAATTTGTTGGAGGAGTTGCTTACAAGTTGACCACCTTAACCGG  Raphanus raphanistrum subsp. landra
EY936336       <-- AAAGAAAAATTTGTTGGAGGAGTTGCTTACAAGTTGACCACCTTAACCGG  Raphanus sativus cv Early Scarlet Globe
EX769091       <-- AAAGAAAAATTTGTTGGAGGAGTTGCTTACAAGTTGACCACCTTAACCGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX901118       <-- AAAGAAAAATTTGTTGGAGGAGTTGCTTACAAGTTGACCACCTTAACCGG  Raphanus sativus cv Early Scarlet Globe
EX768997       <-- AAAGAAAAATTTGTTGGAGGAGTTGCGTACAAGTTGAGCACCTTAACCGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX777348       <-- AAAGAAAAATTTGTTGGAGGAGTTGCTTACAAGTTGACCACCTTAACCGG  Raphanus raphanistrum subsp. landra
FD966704       <-- AAAGAAAAATTTGTTGGAGGAGTTGCTTACAAGTTGACCACCTTAACCGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY901984       <-- AAAGAAAAATTTGTTGGAGGAGTTGCTTACAAGTTGACCACCTTAACCGG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD984778       <-- AAAGAAAAATTTGTTGGAGGAGTTGCTTACAAGTTGACCACCTTAACCGG  Raphanus raphanistrum subsp. landra
EY902014       <-- AAAGAAAAATTTGT-GGAGGAGTTGCTTACAAGTTGACCACCTTAACCGG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD536801       <-- AAAGAAAAATTTGTTGGAGGAGTTGCTTACAAGTTGACCACCTTAACCGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY895687       <-- AAAGAAAAATTTGTTGGAGGAGTTGCGTACAAGTTGAGCACCTTAACCGG  Raphanus raphanistrum subsp. maritimus
FD974831       <-- AAAGAAAAATTTGTTGGAGGAGTTGCTTACAAGTTGACCACCTTAACCGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX761312       <-- AAAGAAAAATTTGTTGGAGGAGTTGCTTACAAGTTGACCACCTTAACCGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX761513       <-- AAAGAAAAATTTGTTGGAGGAGTTGCTTACAAGTTGACCACCTTAACCGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY902561       <-- AAAGAAAAATTTGTTGGAGGAGTTGCTTACAAGTTGACCACCTTAACCGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY902358       <-- AAAGAAAAATTTGTTGGAGGAGTTGCTTACAAGTTGACCACCTTAACCGG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD968931       <-- AAAGAAAAATTTGTTGGAGGAGTTGCTTACAAGTTGACCACCTTAACCGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542951       <-- AAAGAAAAATTTGTTGGAGGAGTTGTTTACAAGTTGACCACCTTAACCGG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD538170       <-- AAAGAAAAATTTGTTGGAGGAGTTGCTTACAAGTTGACCACCTTAACCGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY903534       <-- AAAGAAAAATTTGTTGGAGGAGTTGCTTACAAGTTGACCACCTTAACCGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV528722       --> AAAGAAAAATTTGTTGGAGGAGTTGCGTACAAGTTGAGCACCTTAACCGG  Raphanus raphanistrum subsp. maritimus
EY906373       --> AAAGAAAAATTTGTTGGAGGAGTTGCTTACAAGTTGACCACCTTAACCGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY940603       --> AAAGAAAAATTTGTTGGAGGAGTTGCTTACAAGTTGACCACCTTAACCGG  Raphanus sativus cv Early Scarlet Globe
FD978625       --> AAAGAAAAATTTGTTGGAGGAGTTGCTTACAAGTTGACCACCTTAACCGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX757827       --> AAAGAAAAATTTGTTGGAGGAGTTGCTTACAAGTTGACCACCTTAACCGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX765205       --> AAAGAAAAATTTGTTGGAGGAGTTGCGTACAAGTTGAGCACCTTAACCGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX765294       --> AAAGAAAAATTTGTTGGAGGAGTTGCTTACAAGTTGACCACCTTAACCGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX897343       --> AAAGAAAAATTTGTTGGAGGAGTTGCTTACAAGTTGACCACCTTAACCGG  Raphanus sativus cv Early Scarlet Globe
EY900043       --> AAAGAAAAATTTGTTGGAGGAGTTGCGTACAAGTTGAGCACCTTAACCGG  Raphanus raphanistrum subsp. maritimus
EY905584       --> AAAGAAAAATTTGTTGGAGGAGTTGCTTACAAGTTGACCACCTTAACCGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY907649       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD540270       --> AAAGAAAAATTTGTTGGAGGAGTTGCTTACAAGTTGACCACCTTAACCGG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD542006       --> AAAGAAAAATTTGTTGGAGGAGTTGCTTACAAGTTGACCACCTTAACCGG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD973196       --> AAAGAAAAATTTGTTGGAGGAGTTGCTTACAAGTTGACCACCTTAACCGG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD988155       --> AAAGAAAAATTTGTTGGAGGAGTTGCTTACAAGTTGACCACCT.......  Raphanus raphanistrum subsp. landra
EX758079       --> AAAGAAAAATTTGTTGGAGGAGTTGCTTACAAGTTGACCACCTTAACCGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV539072       --> AAAGAAAAATTTGTTGGAGGAGTTGCTTACAAGTTGACCACCTTAACCGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV549043       --> AAAGAAAAATTTGTTGGAGGAGTTGCTTACAAGTTGACCACCTTAACCGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY906079       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY907754       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD557910       --> AAAGAAAAATTTGTTGGAGGAGTTGCTTACAAGTTGACCACCTTAACCGG  Raphanus raphanistrum subsp. landra
FY434706       --> AAAGAAAAATTTGTTGGAGGAGTTGCTTACAAGTTGACCACCTTAACCGG  Raphanus sativus cv GSK3-1
EX773548       --> ..................................................  Raphanus raphanistrum subsp. landra
FD988144       --> AAAGAAAAATTTGTTGGAGGAGTTGCTTACAAGTTGACCACCTTAACCGG  Raphanus raphanistrum subsp. landra
FD970304       --> AAAGAAAAATTTGTTGGAGGAGTTGCTTACAAGTTGACCACCTTAACCGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY905623       --> AAAGAAAAATTTGT-GGAGGAGTTGCTTACAAGTTGACCACCTTAACCGG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD988931       --> AAAGAAAAATTTGTTGGAGGAGTTGCTTACAAGTTGACCACCTTAACCGG  Raphanus raphanistrum subsp. landra

               601    -    651
UN13891        --> AACAATCGGAACCGTCCCAGGGCCTTGGGAAAATGCACCACAACTAGTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532635       <-- AACCATTGGAACCGTCCCAGGGCCTTGGGAAAATTCACCACAACTAGTTA  Raphanus raphanistrum subsp. maritimus
EV544601       <-- AACAATTGGAACCGTCCCAGGGCCTTGGGAAAATGCACCACAACTAGTTA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD984090       <-- AACCATTGGAACCGTCCCAGGGCCTTGGGAAAATGCACCACAACTAGTTA  Raphanus raphanistrum subsp. landra
EY936336       <-- AACCATCGGAACCGTCCCAGGGCCTTGGGAAAATGCACCACAACTAGTTA  Raphanus sativus cv Early Scarlet Globe
EX769091       <-- AACCATCGGAACCGTCCCAGGGCCTTGGGAAAATGCACCACAACTAGTTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX901118       <-- AACCATCGGAACCGTCCCAGGGCCTTGGGAAAATGCACCACAACTAGTTA  Raphanus sativus cv Early Scarlet Globe
EX768997       <-- AACCATTGGAACCGTCCCAGGGCCTTGGGAAAATGCACCACAACTAGTTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX777348       <-- AACCATCGGAACCGTCCCAGGGCCTTGGGAAAATGCACCACAACTAGTCA  Raphanus raphanistrum subsp. landra
FD966704       <-- AACAATCGGAACCGTCCCAGGGCCTTGGGAAAATGCACCACAACTAGTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY901984       <-- AACAATCGGAACCGTCCCAGGGCCTTGGGAAAATGCACCACAACTAGTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD984778       <-- AACCATCGGAACCGTCCCAGGCCCTTGGGAAAATGCACCACAACTAGTTA  Raphanus raphanistrum subsp. landra
EY902014       <-- AACAATCGGAACCGTCCCAGGGCCTTGGGAAAATGCACCACAACTAGTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD536801       <-- AACAATCGGAACCGTCCCAGGGCCTTGGGAAAATGCACCACAACTAGTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY895687       <-- AATCATTGGAACCGTCCCAGGGCCTTGGGAAAATGCACCACAACTAGTTA  Raphanus raphanistrum subsp. maritimus
FD974831       <-- AACAATCGGAACCGTCCCAGGGCCTTGGGAAAATGCACCACAACTAGTTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX761312       <-- AACAATCGGAACCGTCCCAGGGCCTTGGGAAAATGCACCACAACTAGTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX761513       <-- AACAATCGGAACCGTCCCAGGGCCTTGGGAAAATGCACCACAACTAGTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY902561       <-- AACAATCGGAACCGTCCCAGGGCCTTGGGAAAATGCACCACAACTAGTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY902358       <-- AACAATCGGAACCGTCCCAGGGCCTTGGGAAAATGCACCACAACTAGTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD968931       <-- AACAATCGGAACCGTCCCAGGGCCTTGGGAAAATGCACCACAACTAGTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542951       <-- AACAATCGGAACCGTCCCAGGGCCTTGGGAAAATGCACCACAACTAGTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD538170       <-- AACAATCGGAACCGTCCCAGGGCCTTGGGAAAATGCACCACAACTAGTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY903534       <-- AACAATCGGAACCGTCCCAGGGCCTTGGGAAAATGCACCACAACTAGTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV528722       --> AACCATTGGAACCGTC..................................  Raphanus raphanistrum subsp. maritimus
EY906373       --> AACAATCGGAACCGTCCCAGGGCCTTGGGAAAATGCACCACAACTAGTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY940603       --> AACCATCGGAACCGTCCCAGGGCCTTGGGAAAATGCACCACAACTAGTTA  Raphanus sativus cv Early Scarlet Globe
FD978625       --> AACAATCGGAACCGTCCCAGGGCCTTGGGAAAATGCACCACAACTAGTTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX757827       --> AACAATCGGAACCGTCCCAGGGCCTTGGGAAAATGCACCACAACTAGTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX765205       --> AACCATTGGAACCGTCCCAGGGCCTTGGGAAAATGCACCACAACTAGTTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX765294       --> AACCATCGGAACCGTCCCAGGGCCTTGGGAAAATGCACCACAACTAGTTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX897343       --> AACCATCGGAACCGTCCCAGGGCCTTGGGAAA-TGCACCACAACTAGTTA  Raphanus sativus cv Early Scarlet Globe
EY900043       --> AATCATTGGAACCGTCCCAGGGCCTTGGGAAAATGCACCACAACTAGTTA  Raphanus raphanistrum subsp. maritimus
EY905584       --> AACAATCGGAACCGTCCCAGGGCCTTGGGAAAATGCACCACAACTAGTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY907649       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD540270       --> AACAATCGGAACCGTCCCAGGGCCTTGGGAAAATGCACCACAACTAGTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD542006       --> AACAATCGGAACCGTCCCAGGGCCTTGGGAAAATGCACCACAACTAGTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD973196       --> AACAATCGGAACCGTCCCAGGGCCTTGGGAAAATGCACCACAACTAGTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD988155       --> ..................................................  Raphanus raphanistrum subsp. landra
EX758079       --> AACAATCGGAACCGTCCCAGGGCCTTGGGAAAATGCACCACAACTAGTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV539072       --> AACAATCGGAACCGTCCCAGGGCCTTGGGAAAATGCACCACAACTAGTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV549043       --> AACAATTGGAACCGTCCCAGGGCCTTGGGAAAATGCACCACAACTAGTTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY906079       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY907754       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD557910       --> AACCATCGGAACCGTCCCAGGGCCTTGGGAAAATGCACCACAACTAGTTA  Raphanus raphanistrum subsp. landra
FY434706       --> AACAATCGGAACCGTCCCAGGGCCTTGGGAAAATGCACCACAACTAGTTA  Raphanus sativus cv GSK3-1
EX773548       --> ..................................................  Raphanus raphanistrum subsp. landra
FD988144       --> AACCATCGGAACCGTCCCAGGGCCTTGGGAAAATGCACCACAACTAGTTA  Raphanus raphanistrum subsp. landra
FD970304       --> AACAATCGGAACCGTCCCAGGGCCTTGGGAAAATGCACCACAACTAGTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY905623       --> AACAATCGGAACCGTCCCAGGGCCTTGGGAAAATGCACCACAACTAGTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD988931       --> AACCATCGGAACCGTCCCAGGGCCTTGGGAAAATGCACCACAACTAGTTA  Raphanus raphanistrum subsp. landra

               651    -    701
UN13891        --> TCACCAATGATACTGCGAAGACCTTCCTCGTGAAATTCCATAGGGTTCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532635       <-- TCACCAATGATACTGCGAAGACCTTCCTCGTGAAATTCCATAGGGTTCAT
EV544601       <-- TCACCAATGATACTGCGAAGACCTTCCTCGTGAAATTCCATAGGGTTCAT
FD984090       <-- TCACCAATGATACTGCGAAGACCTTCCTCGTGAAATTCCATAGGGTTCAT
EY936336       <-- TCACCAATGATACTGCGAAGACCTTCCTCGTGAAATTCCATAGGGTTCAT
EX769091       <-- TCACCAATGATACTGCGAAGACCTTCCTCGTGAAATTCCATAGGGTTCAT
EX901118       <-- TCACCAATGATACTGCGAAGACCTTCCTCGTGAAATTCCATAGGGTTCAT
EX768997       <-- TCACCAATGATACTGCGAAGACCTTCCTCGTGAAATTCCATAGGGTTCAT
EX777348       <-- TCACCAATGATACTGCGAAGACCTTCCTCGTGAAATTCCATAGGGTTCAT
FD966704       <-- TCACCAATGATACTGCGAAGACCTTCCTCGTGAAATTCCATAGGGTTCAT
EY901984       <-- TCACCAATGATACTGCGAAGACCTTCCTCGTGAAATTCCATAGGGTTCAT
FD984778       <-- TCACCAATGATACTGCG.................................
EY902014       <-- TCACCAATGATACTGCGAAGACCTTCCTCGTGAAATTCCATAGGGTTCAT
FD536801       <-- TCACCAATGATACTGGGAAGACCTTCCTCGTGAAATTCCATAGGGTTCAT
EY895687       <-- TCACCAATGATACTGCGAAGACCTTCCTCGTGAAATTCCATAGGGTTCAT
FD974831       <-- TCACCAATGATACTGCGAAGACCTTCCTCGTGAAATTCCATAGGGTTCAT
EX761312       <-- TCACCAATGATACTGCGAAGACCTTCCTCGTGAAATTCCATAGGGTTCAT
EX761513       <-- TCACCAATGATACTGCGAAGACCTTCCTCGTGAAATTCCATAGGGTTCAT
EY902561       <-- TCACCAATGATACTGCGAAGACCTTCCTCGTGAAATTCCATAGGGTTCAT
EY902358       <-- TCACCAATGATACTGCGAAGACCTTCCTCGTGAAATTCCATAGGGTTCAT
FD968931       <-- TCACCAATGATACTGCGAAGACCTTCCTCGTGAAATTCCATAGGGTTCAT
EV542951       <-- TCACCAATGATACTGCGAAGACCTTCCTCGTGAAATTCCATAGGGTTCAT
FD538170       <-- TCACCAATGATACTGCGAAGACCTTCCTCGTGAAATTCCATAGGGTTCAT
EY903534       <-- TCACCAATGATACTGGGAAGACCTTCCTCGTGAAATTCCATAGGGTTCAT
EV528722       --> ..................................................
EY906373       --> TCACCAATGATACTGCGAAGACCTTCCTCGTGAAATTCCATAGGGT-CAT
EY940603       --> TCACCAATGATACTGCGAAGACCTTCCTCGTGAAttcc............
FD978625       --> TCACCAATGATACTGCGAAGACCTTCCTCGTGAAATTCCATAGGGTTCAT
EX757827       --> TCACCAATGATACTGCGAAGACCTTCCTCGTGAA-TTCCATAGGGTTCAT
EX765205       --> TCACCAATGATACTGCGAAGACCTTCCTCGTGAAttcc............
EX765294       --> TCACCAATGATACTGCGAAGACCTTCCTCGTGAAAT..............
EX897343       --> TCACCAATGATACTGCGAAGACCTTCCTCGTGAA-TTCCATAGGGT-CAT
EY900043       --> TCACCAATGATACTGCGAAGACCTTCCTCGTGAAATTCCATAGGGTTCAT
EY905584       --> TCACCAATGATACTGCGAAGACCTTCCTCGTG..................
EY907649       --> ..................................................
FD540270       --> TCACCAATGATACTGCGAAGACCTTCCTCGTGAA................
FD542006       --> TCACCAATGATACTGCGAAGACCTTCCTCGTGAAATTCCATACGGTTCAT
FD973196       --> TCACCAATGATACTGCGAAGACCTTCCTCGTGAA-TTCCAT.........
FD988155       --> ..................................................
EX758079       --> TCACCAATGATACTGCGAAGACCTTCCTCGTGAAttcc............
EV539072       --> TCACCAATGATACTGCGAAGACCTTCCTCGTGAAATTCCATAGGGTTCAT
EV549043       --> TCACCAATGATACTGCGAAGACCTTCCTCGTGAAATTCCATAGGGTTCAT
EY906079       --> ..................................................
EY907754       --> ..................................................
FD557910       --> TCACCAATGATACTGCGAAGACCTTCCTCGTGAAATTCCATAGGGT-CAT
FY434706       --> TCACCAATGATACTGCGAAGACCTTCCTCGTGAAATTCCATAGGGTTCAT
EX773548       --> ..................................................
FD988144       --> TCACCAATGATACTGCGAAGACCTTCCTCGTGAAATTCCATAGGGTTCAT
FD970304       --> TCACCAATGATACTGCGAAGACCTTCCTCGTGAAATTCCATAGGGT-CAT
EY905623       --> TCACCAATGATACTGCGAAGACCTTCCTCGTGAAATTCCATAGGGTTCAT
FD988931       --> TCACCAATGATACTGCGAAGACCTTCCTCATGAA-TTCCATAGGGT-CAT

               701    -    751
UN13891        --> GATGATACTACTTCTACTTCAAGTCTGTAGAAGTTAGGTCTAAG---GAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532635       <-- GATGATACTACTTCTACTTCAAGTCTGTAGAAGTTAGGTCTAAG---GAT  Raphanus raphanistrum subsp. maritimus
EV544601       <-- GATGATACTACTTCTACTTCAAGTCTGTAGAAGTTAGGTCTAAG---GAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD984090       <-- GATGATACTACTTCTACTTCAAGTCTGTAGAAGTTAGGTCTAAG---GAT  Raphanus raphanistrum subsp. landra
EY936336       <-- GATGATACTACTTCTACTTCAAGTCTGTAGAAGTTAGGTCTAAG---GAT  Raphanus sativus cv Early Scarlet Globe
EX769091       <-- GATGATACTACTTCTACTTCAAGTCTGTAGAAGTTAGGTCTAAG---GAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX901118       <-- GATGATACTACTTCTACTTCAAGTCTGTAGAAGTTAGGTCTAAG---GAT  Raphanus sativus cv Early Scarlet Globe
EX768997       <-- GATGATACTACTTCTACTTCAAGTCTGTAGAAGTTAGGTCTAAG---GAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX777348       <-- GATGATACTACTTCTACTTCAAGTCTGTAGAAGTTAGGTCTAAG---GAT  Raphanus raphanistrum subsp. landra
FD966704       <-- GATGATACTACTTCTACTTCAAGTCTGTAGAAGTTAGGTCTAAG---GAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY901984       <-- GATGATACTACTTTTACTTCAAGTCTGTAGAAGTTAGGTCTAAG---GAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD984778       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY902014       <-- GATGATACTACTTCTACTTCAAGTCTGTAGAAGTTAGGTCTAAG---GAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD536801       <-- GATGATACTACTTCTACTTCAAGTCTGTAGAAGTTAGGTCTAAG---GAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY895687       <-- GATGATACTACTTCTACTTCAAGTCTGTAGAAGTTAGGTCTAAG---GAT  Raphanus raphanistrum subsp. maritimus
FD974831       <-- GATGATACTACTTCTACTTCAAGTCTGTAGAAGTTAGGTCTAAG---GAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX761312       <-- GATGATACTACTTCTACTTCAAGTCTGTAGAAGTTAGGTCTAAG---GAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX761513       <-- GATGATACTACTTCTACTTCAAGTCTGTAGAAGTTAGGTCTAAG---GAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY902561       <-- GATGATACTACTTCTACTTCAAGTCTGTAGAAGTTAGGTCTAAG---GAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY902358       <-- GATGATACTACTTCTACTTCAAGTCTGTAGAAGTTAGGTCTAAG---GAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD968931       <-- GATGATACTACTTCTACTTCAAGTCTGTAGAAGTTAGGTCTAAG---GAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542951       <-- GATGATACTACTTCTACTTCAAGTCTGTAGAAGTTAGGTCTAAG---GAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD538170       <-- GATGATACTACTTCTACTTCAAGTCTGTAGAAGTTAGGTTTAAG---GAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY903534       <-- GATGATACTACTTTTACTTCAAGTCTGTAGAAGTTAGGTTTAAG---GAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV528722       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY906373       --> GATGATACTACTTCTACTTCA-GTCTGTAGAAGT-A-GTCTAA----GAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY940603       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD978625       --> GATGATACTACTTCTACTTCAAGTCTGTAGAAGTTAG-TCTAAG----AT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX757827       --> GATGATACTACTTCTACTTCAAGTCTGTAGAAGTTAGGTCTA........  Raphanus raphanistrum subsp. raphanistrum (MS)
EX765205       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX765294       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX897343       --> GATGATACTACTTCTACTTCA-GTCTGTAGAA..................  Raphanus sativus cv Early Scarlet Globe
EY900043       --> GATGATACTACTTCTACTTCAAGTCTGTAGAAGTTAG-TCTAAG----AT  Raphanus raphanistrum subsp. maritimus
EY905584       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY907649       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD540270       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD542006       --> GATGATACTACTTCTACTTCAAGTCTGTAGAAGTTAGGTC..........  Raphanus raphanistrum subsp. raphanistrum (MS)
FD973196       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD988155       --> ..................................................  Raphanus raphanistrum subsp. landra
EX758079       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV539072       --> GATGATACTACTTCTACTTCAAGTCTGTAGAAGTTAGG............  Raphanus raphanistrum subsp. raphanistrum (MS)
EV549043       --> GATGATACTACTTCTACTTCAAGTCTGTAGAAGTTAGGTCTAAA---GAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY906079       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY907754       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD557910       --> GATGATACTACTTCTACTTCA-GTCTGTAGA-GTTAG-TCTAAGATATAT  Raphanus raphanistrum subsp. landra
FY434706       --> GATGATACTACTTCTACTTCAAGTCTGTAGAAGTTAGGTCTAAG---GAT  Raphanus sativus cv GSK3-1
EX773548       --> ..................................................  Raphanus raphanistrum subsp. landra
FD988144       --> GATGATACTACTTCTACTTCAAGTCTGTAGAAGTTAGGTCTAAG---GAT  Raphanus raphanistrum subsp. landra
FD970304       --> GATGATACTACTTCTACTTCA-GTCTGTAGAAGT-A-GTCTAA----GAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY905623       --> GATGATACTACTTCTACTTCAAGTCTGTAGAAGTTAGGTCTAAG---GAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD988931       --> GATGATACTACTTCTACTTCA-GTCTGTAG....................  Raphanus raphanistrum subsp. landra

               751    -    801
UN13891        --> ----GTTCCCATTCTACTAGTCAACAAGCCAAAATCACGTAATGT-AAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532635       <-- ----GTTCCCATTCTACTAGTCAACAAGCCAAAATCATGTAATGG-AAAG  Raphanus raphanistrum subsp. maritimus
EV544601       <-- ----GTTCCCATTCTACTAGTCAACAAGCCAAAATCACGTAATGT-AAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD984090       <-- atatgttccc........................................  Raphanus raphanistrum subsp. landra
EY936336       <-- ATATGTTCCCATTCTACTAGTCAACAAGCCAAAATCACGTAATGT-AAAG  Raphanus sativus cv Early Scarlet Globe
EX769091       <-- ATATGTTTCCATTCTACTAGTCAACAAGCCAAAATCACGTAATGT-AAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX901118       <-- ATATGTTCCCATTCTACTAGTCAACAAGCCAAAATCACGTAATGT-AAAG  Raphanus sativus cv Early Scarlet Globe
EX768997       <-- ----GTTCCCATTCTACTAGTCAACAAGCCAAAATCATGTAATGT-AAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX777348       <-- ATATGTTCCCATTCTACTAGTCAACAAGCCAAAGTCACGTAATGT-AAAG  Raphanus raphanistrum subsp. landra
FD966704       <-- ----GTTCCCATTCTAGTAGTCAACAAGCCAAAATCACGTAATGT-AAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY901984       <-- ----GTTCCCATTCTAGTAGTCAACAAGCCAAAATCACGTAATGT-AAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD984778       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY902014       <-- ----GTTCCCATTCTAGTAGTCAGCAAGCCAAAATCACGTAATGT-AAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD536801       <-- ----GCTCCCATTCTACTAGTCAACAAGCCAAAATCACGTAATGT-AAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY895687       <-- ----GTTCCCATTCTACTAGTCAACAAGCCAAAATCATGTAATGT-AAAG  Raphanus raphanistrum subsp. maritimus
FD974831       <-- ----GTTCCCATTCTACTAGTCAACAGGCCAAAATCACGTAATGT-AAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX761312       <-- ----GTTCCCATTCTACTAGTCAACAAGCCAAAATCACGTAATGT-AAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX761513       <-- ----GTTCCCATTCTAGTAGTCAACAAGCCAAAATCACGTAATGT-AAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY902561       <-- ----GTTCCCATTCTAGTAGTCAACAAGCCAAAATCACGTAATGT-AAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY902358       <-- ----GTTCCCATTCTAGTAGTCAACAAGCCAAAATCACGTAATGT-AAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD968931       <-- ----GTTCCCATTCTAGTAGTCAACAAGCCAAAATCACGTAATGT-AAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542951       <-- ----GTTCCCATTCTAGTAGTCAACAAGCCAAAATCACGTAATGT-AAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD538170       <-- ----GTTCCCATTTTACTAGTCAACAATCCAAAATCATGTAATGT-AAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY903534       <-- ----GTTCCCATTTTAGTAGTCAACAAGCCAAAATCACGTAGTGT-AAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV528722       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY906373       --> ----GTTCCCATTCTAGTAGTCA-CAAGCCAAA-TCACGTAATGT-AAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY940603       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD978625       --> ----GTTCCCATTCTACTAGTCAACA-GCCAAA-TCACGTAATGT-AAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX757827       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX765205       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX765294       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX897343       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY900043       --> ----GTTCCCATTCTACTAGTCA-CAAGCCAAA-TCATGTAATGT-AA..  Raphanus raphanistrum subsp. maritimus
EY905584       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY907649       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD540270       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD542006       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD973196       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD988155       --> ..................................................  Raphanus raphanistrum subsp. landra
EX758079       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV539072       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV549043       --> ----GTTCCCATTCTACTA...............................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY906079       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY907754       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD557910       --> ----GTTCTCATTCTACTAGTCA-CAAGCCAAAtca..............  Raphanus raphanistrum subsp. landra
FY434706       --> ----GTTCCCATTCTACTAGTCAACACGCCAAAATCATGTAATGTTAAAG  Raphanus sativus cv GSK3-1
EX773548       --> ..................................................  Raphanus raphanistrum subsp. landra
FD988144       --> ATATGTTCCCATTCTACTAGTCAACAAGCCAAAATCACGTAATGT-AAAG  Raphanus raphanistrum subsp. landra
FD970304       --> ----GTTCTCATTCTAGTAGTCA-C-AGCC-AAATCACG...........  Raphanus raphanistrum subsp. raphanistrum (MS)
EY905623       --> ----GTTCCCATTCTAGTAGTCAGCAAGCCAAAATCACGTAATGT-AAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD988931       --> ..................................................  Raphanus raphanistrum subsp. landra

               801    -    851
UN13891        --> CCTGTGACTCGTCCATGGCCTAAAATAATGGGTTGAGATAATACCCTCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532635       <-- CCTGTGACTCGTCCATGGCCTAAAATAATGGGTTGAGATGATACCCTCAT
EV544601       <-- CCTGTGACTCGTCCATGGCCTAAAATAATGGGTTGAGATAATACCCTCAT
FD984090       <-- ..................................................
EY936336       <-- CCTGTGACTCGTCCATGGCCTAAAATAATGGGTTGAGATAATACCCTCAT
EX769091       <-- CCTGTGACTCGTCCATGGCCTAAAATAATGGGTTGAGATAATACCCTCAT
EX901118       <-- CCTGTGACTCGTCCATGGCCTAAAATAATGGGTTGAGATAATACCCTCAT
EX768997       <-- CCTGTGACTCGTCCATGGCCTAAAATAATGGGTTGAGATGATGCCCTCAT
EX777348       <-- CCTGTGACTCGTCCATGGCCTAAAATAATGGGTTGAGATAATACCCTCAT
FD966704       <-- CCTGTGACTCGTCCATGGCCTAAAATAATGGGTTGAGATAATACCCTCAT
EY901984       <-- CCTGTGACTCGTCCATGGCCTAAAATAATGGGTTGAGATAATACCCTCAT
FD984778       <-- ..................................................
EY902014       <-- CCTGTGACTCGTCCATGGCCTAAAATAATGGGTTGAGATAATACCCTCAT
FD536801       <-- CCTGCGACTCGTCCATGGCCTAAAATAATGGGTTGAGATAATACCCTCAT
EY895687       <-- CCTGTGACTCGTCCATGGCCTAAAATAATGGGTTGAGATGATACCCTCAT
FD974831       <-- CCTGTGACTCGTCCATGGCCTAAAATAATGGGTTGAGATAATACCCTCAT
EX761312       <-- CCTGCGACTCGTCCATGGCCTAAAATAATGGGTTGAGATAATACCCTCAT
EX761513       <-- CCTGTGACTCGTCCATGGCCTAAAATAATGGGTTGAGATAATACCCTCAT
EY902561       <-- CCTGTGACTCGTCCATGGCCTAAAATAATGGGTTGAGATAATACCCTCAT
EY902358       <-- CCTGTGACTCGTCCATGGCCTAAAATAATGGGTTGAGATAATACCCTCAT
FD968931       <-- CCTGTGACTCGTCCATGGCCTAAAATAATGGGTTGAGATAATACCCTCAT
EV542951       <-- CCTGTGATTCGTCCATGGCCTAAAATAATGGGTTGAGATAATACCCTCAT
FD538170       <-- CCTGCGACTCGTCCATGGCCTAAAATAATGGGTTGAGATAATACCCTCAT
EY903534       <-- CCTGTGATTCGTCCATGGCCTAAAATAATGGGTTGAGATAATACCCTCAT
EV528722       --> ..................................................
EY906373       --> CCTGTGACTCGTC-ATGGCtaaa...........................
EY940603       --> ..................................................
FD978625       --> CC................................................
EX757827       --> ..................................................
EX765205       --> ..................................................
EX765294       --> ..................................................
EX897343       --> ..................................................
EY900043       --> ..................................................
EY905584       --> ..................................................
EY907649       --> ..................................................
FD540270       --> ..................................................
FD542006       --> ..................................................
FD973196       --> ..................................................
FD988155       --> ..................................................
EX758079       --> ..................................................
EV539072       --> ..................................................
EV549043       --> ..................................................
EY906079       --> ..................................................
EY907754       --> ..................................................
FD557910       --> ..................................................
FY434706       --> CCTGTGACTCGTCCATGGCCTAAAATAATGGGTTGAGATGATACCCTCAT
EX773548       --> ..................................................
FD988144       --> CCTGTGACTCGTCCATGGCCTAAAATAATGGGTTGAGATAATACCCTCAT
FD970304       --> ..................................................
EY905623       --> CCTGTGACTCGTCCATGGCCTAAAATAATGGGTTGAGATAATACCCTCAT
FD988931       --> ..................................................

               851    -    901
UN13891        --> TGCCTGTACCTGAATTTCCATAAATATATCAAGTTATGTTTGCCAACATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532635       <-- -GCCTGTACCTGAATTTCCATAAATATATTAAGTTATGTTTGCC......
EV544601       <-- TGCCTGT...........................................
FD984090       <-- ..................................................
EY936336       <-- TGCCTGc...........................................
EX769091       <-- TGCCTGTACCTGAATTTCCATAAATATATCAAGTTATGTTTGCC......
EX901118       <-- TGCCTGTACCTGAATTTCCATAAATATATCAAGTTATGTTTGCC......
EX768997       <-- -GCCTGTACCTGAATTTCCATAAATATATTAAGTTATGTTTGCC......
EX777348       <-- TGCCTGTACCTGAATTTCCATAAATATATCAAGTTATTTTTGCC......
FD966704       <-- TGCCTGTACCTGAATTTCCATAAATATATCAAGTTATGTTTGCCAgc...
EY901984       <-- TGCCTGTACCTGAATTTCCATAAATATATCAAGTTATGTTT.........
FD984778       <-- ..................................................
EY902014       <-- TGCCTGTACCTGAATTTCCATAACTATATCAAGTTATGTTTGCC......
FD536801       <-- TGCCTGTACCTGAATTTCCATAAATATATCAAGTTATGTTTGCC......
EY895687       <-- T-CCTGTACCTGAATTTCCATAAATATATTAAGTTATGTTTGCC......
FD974831       <-- TGCCTGTACCTGAATTTCCATAAATATATCAAGTTATGTTTGCC......
EX761312       <-- TGCCTGTACCTGAATTTCCATAAATATATCAAGTTATGTTTGCC......
EX761513       <-- TGCCTGTACCTGAATTTCCATAAATATATCAAGTTATGTTTGCC......
EY902561       <-- TGCCTGTACCTGAATTTCCATAAATATATCAAGTTATGTTTacc......
EY902358       <-- TGCCTGTACCTGAATTTCCATAAATATATCAAGTTATGTTTGCCt.....
FD968931       <-- TGCCTGTACCTGAATTTCCATAAATATATCAAGTTATGTTTGCCAACATT
EV542951       <-- TGCCTGTACCTGAATTTCCATAAATATATCAAGTTATGTTTGCCAAC...
FD538170       <-- TGCCTGTACCTGAATTTCCATAAATATATCAAGTTAT.............
EY903534       <-- TGCCTGTACCTGAATTTCCATAAATATATCAAGTTATGTTTGCC......
EV528722       --> ..................................................
EY906373       --> ..................................................
EY940603       --> ..................................................
FD978625       --> ..................................................
EX757827       --> ..................................................
EX765205       --> ..................................................
EX765294       --> ..................................................
EX897343       --> ..................................................
EY900043       --> ..................................................
EY905584       --> ..................................................
EY907649       --> ..................................................
FD540270       --> ..................................................
FD542006       --> ..................................................
FD973196       --> ..................................................
FD988155       --> ..................................................
EX758079       --> ..................................................
EV539072       --> ..................................................
EV549043       --> ..................................................
EY906079       --> ..................................................
EY907754       --> ..................................................
FD557910       --> ..................................................
FY434706       --> -GCCTGTACCTGAATTTCCATAAATATATTAAGTTATGTTTGCCA.....
EX773548       --> ..................................................
FD988144       --> TGCCTGTACCTGAATTTCCATAAATATATCAAGTTATGTTTGC.......
FD970304       --> ..................................................
EY905623       --> TGCCTGTACCTGAATTTCCATAACTATATCAAGTTATGTTTGCCAcaa..
FD988931       --> ..................................................

               901    -    951
UN13891        --> TTAATTATAAGACAGAACTATACATTAAAACTTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532635       <-- ...................................
EV544601       <-- ...................................
FD984090       <-- ...................................
EY936336       <-- ...................................
EX769091       <-- ...................................
EX901118       <-- ...................................
EX768997       <-- ...................................
EX777348       <-- ...................................
FD966704       <-- ...................................
EY901984       <-- ...................................
FD984778       <-- ...................................
EY902014       <-- ...................................
FD536801       <-- ...................................
EY895687       <-- ...................................
FD974831       <-- ...................................
EX761312       <-- ...................................
EX761513       <-- ...................................
EY902561       <-- ...................................
EY902358       <-- ...................................
FD968931       <-- TTAATTATAAGACAGAACTATACATTAAAACTTTC
EV542951       <-- ...................................
FD538170       <-- ...................................
EY903534       <-- ...................................
EV528722       --> ...................................
EY906373       --> ...................................
EY940603       --> ...................................
FD978625       --> ...................................
EX757827       --> ...................................
EX765205       --> ...................................
EX765294       --> ...................................
EX897343       --> ...................................
EY900043       --> ...................................
EY905584       --> ...................................
EY907649       --> ...................................
FD540270       --> ...................................
FD542006       --> ...................................
FD973196       --> ...................................
FD988155       --> ...................................
EX758079       --> ...................................
EV539072       --> ...................................
EV549043       --> ...................................
EY906079       --> ...................................
EY907754       --> ...................................
FD557910       --> ...................................
FY434706       --> ...................................
EX773548       --> ...................................
FD988144       --> ...................................
FD970304       --> ...................................
EY905623       --> ...................................
FD988931       --> ...................................