1      -     51
UN13897        --> GGAATCCTAGAACTTAAAAAAAAGAATATATTGCAACAGTACTGTCTCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD943034       <-- ...........................ggATTGCAACAATACTGTCTCCT  Raphanus sativus cv Early Scarlet Globe
EY904569       <-- ...................................ACAGTACTGTATCCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV530116       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV531139       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV532957       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX767881       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX901603       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY925679       <-- ..................................................  Raphanus sativus var. oleiformis
FD983095       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD985018       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD575645       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD554743       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV574572       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY935207       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EW720723       <-- ..................................................  Raphanus sativus var. oleiformis
FD567223       <-- ..................................................  Raphanus sativus var. oleiformis
FD971557       --> GGAATCCTAGAACTTAAAAAAAAGAATATATTGCAACAGTACTGTATCCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY908960       --> ..........................gggATTGCAACAGTACTGTATCCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD947021       --> ...........................ggATTGCAACAATACTGTCTCCT  Raphanus sativus cv Early Scarlet Globe
FD562475       --> ......................................ggACTGTCTCCT  Raphanus sativus var. oleiformis
EX770841       --> ..................................................  Raphanus raphanistrum subsp. landra
EX747177       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV525339       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV526730       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV529139       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV536359       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX763846       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX897940       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY929182       --> ..................................................  Raphanus sativus var. oleiformis
EY939229       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD543649       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD946591       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD986945       --> ..................................................  Raphanus raphanistrum subsp. landra
FD989197       --> ..................................................  Raphanus raphanistrum subsp. landra
FD989204       --> ..................................................  Raphanus raphanistrum subsp. landra
EV570220       --> ..................................................  Raphanus raphanistrum subsp. landra
EX762493       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD571893       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FY438770       --> ..................................................  Raphanus sativus cv GSK3-1
EX757863       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD558952       --> ..................................................  Raphanus raphanistrum subsp. landra
FY434463       --> ..................................................  Raphanus sativus cv GSK3-1
EW716627       --> ..................................................  Raphanus sativus var. oleiformis

               51     -    101
UN13897        --> CTCGTTTCCTCCATTGTCATCACTAATCAAATAAGATATCAATGGCTGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD943034       <-- CTCGTTTCCTCCATTGTCACCACTAATCAAATAAGATATCAATGGCTGAA  Raphanus sativus cv Early Scarlet Globe
EY904569       <-- CTCGTTTCCTCCATTGTCACCACTAATCGAATAAGATATCAATGGCTGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV530116       <-- ..........ggATTGTCATCACTAATCAAATAAGATATCAATGGCTGAA  Raphanus raphanistrum subsp. maritimus
EV531139       <-- ..........ggATTGTCATCACTAATCAAATAAGATATCAATGGCTGAA  Raphanus raphanistrum subsp. maritimus
EV532957       <-- ........agggATTGTCATCACTAATCAAATAAGATATCAATGGCTGAA  Raphanus raphanistrum subsp. maritimus
EX767881       <-- ..........ggATTGTCATCACTAATCAAATAAGATATCAATGGCTGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX901603       <-- ..........ggATTGTCATCACTAATCAAATAAGATATCAATGGCTGAA  Raphanus sativus cv Early Scarlet Globe
EY925679       <-- ........ggggATTGTCATCACTAATCAAATAAGATATCAATGGCTGAA  Raphanus sativus var. oleiformis
FD983095       <-- ...........gATTGTCATCACTAATCAAATAAGATATCAATGGCTGAA  Raphanus raphanistrum subsp. landra
FD985018       <-- ..........ggATTGTCATCACTAATCAAATAAGATATCAATGGCTGAA  Raphanus raphanistrum subsp. landra
FD575645       <-- ..............gGTCACCACTAATCAAATAAGATATCAATGGCTGAA  Raphanus sativus cv Early Scarlet Globe
FD554743       <-- ...................ggACTAATCAAATAAGATATCAATGGCTGAA  Raphanus raphanistrum subsp. landra
EV574572       <-- .................................................A  Raphanus raphanistrum subsp. landra
EY935207       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EW720723       <-- ..................................................  Raphanus sativus var. oleiformis
FD567223       <-- ..................................................  Raphanus sativus var. oleiformis
FD971557       --> CTCGTTTCCTCCATTGTCACCACTAATCGAATAAGATATCAATGGCTGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY908960       --> CTCGTTTCCTCCATTGTCACCACTAATCGAATAAGATATCAATGGCTGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD947021       --> CTCGTTTCCTCCATTGTCACCACTAATCAAATAAGATATCAATGGCTGAA  Raphanus sativus cv Early Scarlet Globe
FD562475       --> CTCGTTTCCTCCATTGTCACCACTAATCAAATAAGATATCAATGGCTGAA  Raphanus sativus var. oleiformis
EX770841       --> .ggGTTTCCTCCATTGTCATCACTAATCAAATAAGATATCAATGGCTGAA  Raphanus raphanistrum subsp. landra
EX747177       --> ......ggCTCCATTGTCATCACTAATCAAATAAGATATCAATGGCTGAA  Raphanus raphanistrum subsp. maritimus
EV525339       --> ..........ggATTGTCATCACTAATCAAATAAGATATCAATGGCTGAA  Raphanus raphanistrum subsp. maritimus
EV526730       --> ..........ggATTGTCATCACTAATCAAATAAGATATCAATGGCTGAA  Raphanus raphanistrum subsp. maritimus
EV529139       --> ........agggATTGTCATCACTAATCAAATAAGATATCAATGGCTGAA  Raphanus raphanistrum subsp. maritimus
EV536359       --> ..........ggATTGTCACCACTAATCGAATAAGATATCAATGGCTGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX763846       --> ..........ggATTGTCATCACTAATCAAATAAGATATCAATGGCTGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX897940       --> ..........ggATTGTCATCACTAATCAAATAAGATATCAATGGCTGAA  Raphanus sativus cv Early Scarlet Globe
EY929182       --> ........ggggATTGTCATCACTAATCAAATAAGATATCAATGGCTGAA  Raphanus sativus var. oleiformis
EY939229       --> ..........ggATTGTCACCACTAATCAAATAAGATATCAATGGCTGAA  Raphanus sativus cv Early Scarlet Globe
FD543649       --> ..........ggATTGTCACCACTAATCGAATAAGATATCAATGGCTGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD946591       --> ..........ggATTGTCACCACTAATCAAATAAGATATCAATGGCTGAA  Raphanus sativus cv Early Scarlet Globe
FD986945       --> ...........gATTGTCATCACTAATCAAATAAGATATCAATGGCTGAA  Raphanus raphanistrum subsp. landra
FD989197       --> ..........ggATTGTCATCACTAATCAAATAAGATATCAATGGCTGAA  Raphanus raphanistrum subsp. landra
FD989204       --> ..........ggATTGTCATCACTAATCAAATAAGATATCAATGGCTGAA  Raphanus raphanistrum subsp. landra
EV570220       --> .............ggGTCATCACTAATCAAATAAGATATCAATGGCTGAA  Raphanus raphanistrum subsp. landra
EX762493       --> .............ggGTCATCACTAATCAAATAAGATATCAATGGCTGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD571893       --> ..............gGTCACCACTAATCAAATAAGATATCAATGGCTGAA  Raphanus sativus cv Early Scarlet Globe
FY438770       --> ...................cCACTAATCAAATAAGATATCAATGGCTGAA  Raphanus sativus cv GSK3-1
EX757863       --> ...................ggACTAATCGAATAAGATATCAATGGCTGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD558952       --> ...................ggACTAATCAAATAAGATATCAATGGCTGAA  Raphanus raphanistrum subsp. landra
FY434463       --> ..............................ATAAGATATCAATGGCTGAA  Raphanus sativus cv GSK3-1
EW716627       --> ..................................................  Raphanus sativus var. oleiformis

               101    -    151
UN13897        --> GCATTCACAAGTTTCACCTTCACAAACCTTCATATTCCTTCTTCCTCAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD943034       <-- GCATTCACAAGTTTCACCTTCACAAACCTTCATATTCCTTCTTCCTCAAG
EY904569       <-- GCATTCACAAGTTTCACCTTCACAAACCTTCATATTCCTTCTTCCTCAAG
EV530116       <-- GCATTCACAAGTTTCACCTTCACAAACCTTCATATTCCTTCTTCCTCAAG
EV531139       <-- GCATTCACAAGTTTCACCTTCACAAACCTTCATATTCCTTCTTCCTCAAG
EV532957       <-- GCATTCACAAGTTTCACCTTCACAAACCTTCATATTCCTTCTTCCTCAAG
EX767881       <-- GCATTCACAAGTTTCACCTTCACAAACCTTCATATTCCTTCTTCCTCAAG
EX901603       <-- GCATTCACAAGTTTCACCTTCACAAACCTTCATATTCCTTCTTCCTCAAG
EY925679       <-- GCATTCACAAGTTTCACCTTCACAAACCTTCATATTCCTTCTTCCTCAAG
FD983095       <-- GCATTCACAAGTTTCACCTTCACAAACCTTCATATTCCTTCTTCCTCAAG
FD985018       <-- GCATTCACAAGTTTCACCTTCACAAACCTTCATATTCCTTCTTCCTCAAG
FD575645       <-- GCATTCACAAGTTTCACCTTCACAAACCTTCATATTCCTTCTTCCTCAAG
FD554743       <-- GCATTCACAAGTTTCACCTTCACAAACCTTCATATTCCTTCTTCCTCAAG
EV574572       <-- GCATTCACAAGTTTCACCTTCACAAACCTTCATATTCCTTCTTCCTCAAG
EY935207       <-- ..................................................
EW720723       <-- ..................................................
FD567223       <-- ..................................................
FD971557       --> GCATTCACAAGTTTCACCTTCACAAACCTTCATATCCCTTCTTCCTCAAG
EY908960       --> GCATTCACAAGTTTCACCTTCACAAACCTTCATATTCCTTCTTCCTCAAG
FD947021       --> GCATTCACAAGTTTCACCTTCACAAACCTTCATATTCCTTCTTCCTCAAG
FD562475       --> GCATTCACAAGTTTCACCTTCACAAACCTTCATATTCCTTCTTCCTCAAG
EX770841       --> GCATTCACAAGTTTCACCTTCACAAACCTTCATATTCCTTCTTCCTCAAG
EX747177       --> GCATTCACAAGTTTCACCTTCACAAACCTTCATATTCCTTCTTCCTCAAG
EV525339       --> GCATTCACAAGTTTCACCTTCACAAACCTTCATATTCCTTCTTCCTCAAG
EV526730       --> GCATTCACAAGTTTCACCTTCACAAACCTTCATATTCCTTCTTCCTCAAG
EV529139       --> GCATTCACAAGTTTCACCTTCACAAACCTTCATATTCCTTCTTCCTCAAG
EV536359       --> GCATTCACAAGTTTCACCTTCACAAACCTTCATATCCCTTCTTCCTCAAG
EX763846       --> GCATTCACAAGTTTCACCTTCACAAACCTTCATATTCCTTCTTCCTCAAG
EX897940       --> GCATTCACAAGTTTCACCTTCACAAACCTTCATATTCCTTCTTCCTCAAG
EY929182       --> GCATTCACAAGTTTCACCTTCACAAACCTTCATATTCCTTCTTCCTCAAG
EY939229       --> GCATTCACAAGTTTCACCTGCACAAACCTTCATATTCCTTCTTCCTCAAG
FD543649       --> GCATTCACAAGTTTCACCTTCACAAACCTTCATATCCCTTCTTCCTCAAG
FD946591       --> GCATTCACAAGTTTCACCTTCACAAACCTTCATATTCCTTCTTCCTCAAG
FD986945       --> GCATTCACAAGTTTCACCTTCACAAACCTTCATATTCCTTCTTCCTCAAG
FD989197       --> GCATTCACAAGTTTCACCTTCACAAACCTTCATATTCCTTCTTCCTCAAG
FD989204       --> GCATTCACAAGTTTCACCTTCACAAACCTTCATATTCCTTCTTCCTCAAG
EV570220       --> GCATTCACAAGTTTCACCTTCACAAACCTTCATATTCCTTCTTCCTCAAG
EX762493       --> GCATTCACAAGTTTCACCTTCACAAACCTTCATATTCCTTCTTCCTCAAG
FD571893       --> GCATTCACAAGTTTCACCTTCACAAACCTTCATATTCCTTCTTCCTCAAG
FY438770       --> GCATTCACAAGTTTCACCTTCACAAACCTTCATATTCCTTCTTCCTCAAG
EX757863       --> GCATTCACAAGTTTCACCTTCACAAACCTTCATATTCCTTCTTCCTCAAG
FD558952       --> GCATTCACAAGTTTCACCTTCACAAACCTTCATATTCCTTCTTCCTCAAG
FY434463       --> GCATTCACAAGTTTCACCTTCACAAACCTTCATATTCCTTCTTCCTCAAG
EW716627       --> ..............gACCTTCACAAACCTTCATATTCCTTCTTCCTCAAG

               151    -    201
UN13897        --> TTATTCGCCTAAGCAGATTTCAGGGCCAAATCATGGATGCTGGCTCTCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD943034       <-- TCATTTGCCTAAGCAGATTTCAGGCCCAAATCATGGATGCTGGCTCTTTA  Raphanus sativus cv Early Scarlet Globe
EY904569       <-- TTATTCGCCTAAGCAGATTTCAGGGCCAAATCATGGATGCTGGCTCTCTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV530116       <-- TTATTCGCCTAAGCAGATTTCAGGGCCAAATCATGGATGCTGGCTCTCTA  Raphanus raphanistrum subsp. maritimus
EV531139       <-- TTATTCGCCTAAGCAGATTTCAGGGCCAAATCATGGATGCTGGCTCTCTA  Raphanus raphanistrum subsp. maritimus
EV532957       <-- TTATTCGCCTAAGCAGATTTCAGGGCCAAATCATGGATGCTGGCTCTCTA  Raphanus raphanistrum subsp. maritimus
EX767881       <-- TTACTCGCCTAAGCAGATTTCAGGGCCAAATCATGGATGCTGGCTCTCTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX901603       <-- TTATTCGCCTAAGCAGATTTCAGGGCCAAATCATGGATGCTGGCTCTCTA  Raphanus sativus cv Early Scarlet Globe
EY925679       <-- TTATTCGCCTAAGCAGATTTCAGGGCCAAATCATGGATGCTGGCTCTCTA  Raphanus sativus var. oleiformis
FD983095       <-- TTATTCGCCTAAGCAGATTTCAGGGCCAAATCATGGATGCTGGCTCTCTA  Raphanus raphanistrum subsp. landra
FD985018       <-- TTATTCGCCTAAGCAGATTTCAGGGCCAAATCATGGATTCTGGCTCTCTA  Raphanus raphanistrum subsp. landra
FD575645       <-- TCATTCGCCTAAGCAGATTTCAGGCCCAAATCATGGATGCTGGCTCTCTA  Raphanus sativus cv Early Scarlet Globe
FD554743       <-- TTATTCGCCTAAGCAGATTTCAGGGCCAAATCATGGATGCTGGCTCTCTA  Raphanus raphanistrum subsp. landra
EV574572       <-- TTATTCGCCTAAGCAGATTTCAGGGCCAAATCATGGATTGTGGCTCTCTA  Raphanus raphanistrum subsp. landra
EY935207       <-- ..............................................TCTA  Raphanus sativus cv Early Scarlet Globe
EW720723       <-- ..................................................  Raphanus sativus var. oleiformis
FD567223       <-- ..................................................  Raphanus sativus var. oleiformis
FD971557       --> TTATTCGCCTAAGCAGATTTCAGGGCCAAATCATGGATTCTGGCTCTCTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY908960       --> TTATTCGCCTAAGCAGATTTCAGGGCCAAATCATGGATGCTGGCTCTCTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD947021       --> TCATTTGCCTAAGCAGATTTCAGGCCCAAATCATGGATGCTGGCTCTCTA  Raphanus sativus cv Early Scarlet Globe
FD562475       --> TCATTCGCCTAAGTAGATTTCAGGCCCAAATCATGGATGCTGGCTCTCTA  Raphanus sativus var. oleiformis
EX770841       --> TTATTCACCTAAGCAGATTTCAGGGCCAAATCATGGATGCTGGCTCTCTA  Raphanus raphanistrum subsp. landra
EX747177       --> TTATTCGCCTAAGCAGATTTCAGGGCCAAATCATGGATGCTGGCTCTCTA  Raphanus raphanistrum subsp. maritimus
EV525339       --> TTATTCGCCTAAGCAGATTTCAGGGCCAAATCATGGATGCTGGCTCTCTA  Raphanus raphanistrum subsp. maritimus
EV526730       --> TTATTCGCCTAAGCAGATTTCAGGGCCAAATCATGGATGCTGGCTCTCTA  Raphanus raphanistrum subsp. maritimus
EV529139       --> TTATTCGCCTAAGCAGATTTCAGGGCCAAATCATGGATGCTGGCTCTCTA  Raphanus raphanistrum subsp. maritimus
EV536359       --> TTATTCGCCTAAGCAGATTTCAGGGCCAAATCATGGATGCTGGCTCTCTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX763846       --> TTACTCGCCTAAGCAGATTTCAGGGCCAAATCATGGATGCTGGCTCTCTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX897940       --> TTATTCGCCTAAGCAGATTTCAGGGCCAAATCATGGATGCTGGCTCTCTA  Raphanus sativus cv Early Scarlet Globe
EY929182       --> TTATTCGCCTAAGCAGATTTCAGGGCCAAATCATGGATGCTGGCTCTCTA  Raphanus sativus var. oleiformis
EY939229       --> TCATTCGCCTAAGCAGATTTCAGGCCCAAATCATGGATGCTGGCTCTCTA  Raphanus sativus cv Early Scarlet Globe
FD543649       --> TTATTCGCCTAAGCAGATTTCAGGGCCAAATCATGGATGCTGGCTCTCTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD946591       --> TCATTCGCCTAAGCAGATTTCAGGCCCAAATCATGGATGCTGGCTCTCTA  Raphanus sativus cv Early Scarlet Globe
FD986945       --> TTATTCGCCTAAGCAGATTTCAGGGCCAAATCATGGATGCTGGCTCTCTA  Raphanus raphanistrum subsp. landra
FD989197       --> TTATTCGCCTAAGCAGATTTCAGGGCCAAATCATGGATTCTGGCTCTCTA  Raphanus raphanistrum subsp. landra
FD989204       --> TTATTCGCCTAAGCAGATTTCAGGGCCAAATCATGGATTCTGGCTCTCTA  Raphanus raphanistrum subsp. landra
EV570220       --> TTATTCGCCTAAGCAGATTTCAGGGCCAAATCATGGATTCTGGCTCTCTA  Raphanus raphanistrum subsp. landra
EX762493       --> TTATTCGCCTAAGCAGATTTCAGGGCCAAATCATGGATGCTGGCTCTCTA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD571893       --> TCATTCGCCTAAGCAGATTTCAGGCCCAAATCATGGATGCTGGCTCTCTA  Raphanus sativus cv Early Scarlet Globe
FY438770       --> TCATTCGCCTAAGCAGATTTCAGGCCCAAATCATGGATGCTGGCTCTCTA  Raphanus sativus cv GSK3-1
EX757863       --> TTATTCGCCTAAGCAGATTTCAGGGCCAAATCATGGATGCTGGCTCTCTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD558952       --> TTATTCGCCTAAGCAGATTTCAGGGCCAAATCATGGATGCTGGCTCTCTA  Raphanus raphanistrum subsp. landra
FY434463       --> TCATTCGCCTAAGCAGATTTCAGGCCCAAATCATGGATGCTGGCTCTCTA  Raphanus sativus cv GSK3-1
EW716627       --> TCATTCGCCTAAGCAGATTTCAGGCCCAAATCATGGATGCTGGCTCTCTA  Raphanus sativus var. oleiformis

               201    -    251
UN13897        --> TGAAAAAGAATGAGAAGAGGCCGGAAAAGAATCTGATGAGAGGAAGCTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD943034       <-- TGAAAAAAAATGAGAAGAGGCCGGAAAAGAATCTGATGAGAGGAAGCTTG  Raphanus sativus cv Early Scarlet Globe
EY904569       <-- TGAAAAAGAATGAGAAGAGGCCGGAAAAAAGTCTGATGAGAGGAAGCTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV530116       <-- TGAAAAAGAATGAGAAGAGGCCGGAAAAGAATCTGATGAGAGGAAGCTTG  Raphanus raphanistrum subsp. maritimus
EV531139       <-- TGAAAAAGAATGAGAAGAGGCCGGAAAAGAATCTGATGAGAGGAAGCTTG  Raphanus raphanistrum subsp. maritimus
EV532957       <-- TGAAAAAGAATGAGAAGAGGCCGGAAAAGAATCTGATGAGAGGAAGCTTG  Raphanus raphanistrum subsp. maritimus
EX767881       <-- TGAAAAAGAATGAGAAGAGGCCGGAAATGAATCTGATGAGAGGAAGCTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX901603       <-- TGAAAAAGAATGAGAAGAGGCCGGAAAAGAATCTGATGAGAGGAAGCTTG  Raphanus sativus cv Early Scarlet Globe
EY925679       <-- TGAAAAAGAATGAGAAGAGGCCGGAAAAGAATCTGATGAGAGGAAGCTTG  Raphanus sativus var. oleiformis
FD983095       <-- TGAAAAAGAATGAGAAGAGGCCGGAAAAGAATCTGATGAGAGGAAGCTTG  Raphanus raphanistrum subsp. landra
FD985018       <-- TGAAAAAGAATGAGAAGAGGCCGGAAAAGAATCTGATGAGAGGAAGCTTG  Raphanus raphanistrum subsp. landra
FD575645       <-- TGAAAAAAAATGAGAAGAGGCCGGAAAAGAATCTGATGAGAGGAAGCTTG  Raphanus sativus cv Early Scarlet Globe
FD554743       <-- TGAAAAAGAATGAGAAGAGGCCGGAAAAGAATCTGATGAGAGGAAGCTTG  Raphanus raphanistrum subsp. landra
EV574572       <-- TGAAAAAGAATGAGAAGAGGCCGGAAAAGAATCTGATGAGAGGAAGCTTG  Raphanus raphanistrum subsp. landra
EY935207       <-- TGAAAAAAAATGAGAAGAGGCCGGAAAAGAATCTGATGAGAGGAAGCTTG  Raphanus sativus cv Early Scarlet Globe
EW720723       <-- ..................................................  Raphanus sativus var. oleiformis
FD567223       <-- ..................................................  Raphanus sativus var. oleiformis
FD971557       --> TGAAAAAGAATGAGAAGAGGCCGGAAAAGAATCTGATGAGAGGAAGCTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY908960       --> TGAAAAAGAATGAGAAGAGGCCGGAAAAAAGTCTGATGAGAGGAAGCTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD947021       --> TGAAAAAAAATGAGAAGAGGCCGGAAAAGAATCTGATGAGAGGAAGCTTG  Raphanus sativus cv Early Scarlet Globe
FD562475       --> TGAAAAAAAATGAGAAGAGGCCGGAAAAGAATCTGATGAGAGGAAGCTTG  Raphanus sativus var. oleiformis
EX770841       --> TGAAAAAGAATGAGAAGAGGCCGGAAAAGAATCTGATGAGAGGAAGCTTG  Raphanus raphanistrum subsp. landra
EX747177       --> TGAAAA-GAATGAGAAGAGGCCGGAAAAGAATCTGATGAGAGGAAGCTTG  Raphanus raphanistrum subsp. maritimus
EV525339       --> TGAAAAAGAATGAGAAGAGGCCGGAAAAGAATCTGATGAGAGGAAGCTTG  Raphanus raphanistrum subsp. maritimus
EV526730       --> TGAAAAAGAATGAGAAGAGGCCGGAAAAGAATCTGATGAGAGGAAGCTTG  Raphanus raphanistrum subsp. maritimus
EV529139       --> TGAAAAAGAATGAGAAGAGGCCGGAAAAGAATCTGATGAGAGGAAGCTTG  Raphanus raphanistrum subsp. maritimus
EV536359       --> TGAAAAAGAATGAGAAGAGGCCGGAAAAGAATCTGATGAGAGGAAGCTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX763846       --> TGAAAAAGAATGAGAAGAGGCCGGAAATGAATCTGATGAGAGGAAGCTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX897940       --> TGAAAAAGAATGAGAAGAGGCCGGAAAAGAATCTGATGAGAGGAAGCTTG  Raphanus sativus cv Early Scarlet Globe
EY929182       --> TGAAAAAGAATGAGAAGAGGCCGGAAAAGAATCTGATGAGAGGAAGCTTG  Raphanus sativus var. oleiformis
EY939229       --> TGAAAAAAAATGAGAAGAGGCCGGAAAAGAATCTGATGAGAGGAAGCTTG  Raphanus sativus cv Early Scarlet Globe
FD543649       --> TGAAAAAGAATGAGAAGAGGCCGGAAAAGAATCTGATGAGAGGAAGCTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD946591       --> TGAAAAAAAATGAGAAGAGGCCGGAAAAGAATCTGATGAGAGGAAGCTTG  Raphanus sativus cv Early Scarlet Globe
FD986945       --> TGAAAAAGAATGAGAAGAGGCCGGAAAAGAATCTGATGAGAGGAAGCTTG  Raphanus raphanistrum subsp. landra
FD989197       --> TGAAAAAGAATGAGAAGAGGCCGGAAAAGAATCTGATGAGAGGAGGCTTG  Raphanus raphanistrum subsp. landra
FD989204       --> TGAAAAAGAATGAGAAGAGGCCGGAAAAGAATCTGATGAGAGGAAGCTTG  Raphanus raphanistrum subsp. landra
EV570220       --> TGAAAAAGAATGAGAAGAGGCCGGAAAAGAATCTGATGAGAGGAAGCTTG  Raphanus raphanistrum subsp. landra
EX762493       --> TGAAAAAGAATGAGAAGAGGCCGGAAAAGAATCTGATGAGAGGAAGCTTA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD571893       --> TGAAAAAAAATGAGAAGAGGCCGGAAAAGAATCTGATGAGAGGAAGCTTG  Raphanus sativus cv Early Scarlet Globe
FY438770       --> TGAAAAAAAATGAGAAGAGGCCGGAAAAGAATCTGATGAGAGGAAGCTTG  Raphanus sativus cv GSK3-1
EX757863       --> TGAAAAAGAATGAGAAGAGGTCGGAAAAGAATCTGATGAGAGGAAGCTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD558952       --> TGAAAAAGAATGAGAAGAGGCCGGAAAAGAATCTGATGAGAGGAAGCTTG  Raphanus raphanistrum subsp. landra
FY434463       --> TGAAAAAAAATGAGAAGAGGCCGGAAAAGAATCTGATGAGAGGAAGCTTG  Raphanus sativus cv GSK3-1
EW716627       --> TGAAAAAAAATGAGAAGAGGCCGGAAAAGAATCTGATGAGAGGAAGCTTG  Raphanus sativus var. oleiformis

               251    -    301
UN13897        --> TGTGTGAGAAAGGCTCTGCCACATGATATGCCACTAATGGCTGTGATGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD943034       <-- TGTGTGAGAAAGGCTTTGCCACATGATATGCCACTAATGGCTGTGATGGT  Raphanus sativus cv Early Scarlet Globe
EY904569       <-- TGTGTGAGAAAGGCTCTGCCACATGATATGCCACTAATGGCTGTGATGGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV530116       <-- GGTGTGAGAAGGACTCTGCCACATGATATGCCACTAATGGCTGTGATGGT  Raphanus raphanistrum subsp. maritimus
EV531139       <-- GGTGTGAGAAGGGCTCTGCCACATGATATGCCACTAATGGCTGTGATGGT  Raphanus raphanistrum subsp. maritimus
EV532957       <-- GGTGTGAGAAGGGTTCTGCCACATGATATGCCACTAATGGCTGTGATGGT  Raphanus raphanistrum subsp. maritimus
EX767881       <-- GGTGTGAGAAGGGCTCTGCCACATGATATGCCACTAATGGCTGTGATGGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX901603       <-- TGTGTGAGAAAGGCTCTGCCACATGATATGCCACTAATGGCTGTGATGGT  Raphanus sativus cv Early Scarlet Globe
EY925679       <-- GGTGTGAGAAGGGCTCTGCCACATGATATGCCACTAATGGCTGTGATGGT  Raphanus sativus var. oleiformis
FD983095       <-- TGTGTGAGAAAGGCTCTGCCACATGATATGCCACTAATGGCTGTGATGGT  Raphanus raphanistrum subsp. landra
FD985018       <-- GGTGTGAGAAGGGTTCTGCCACATGATATGCCACTAATGGCTGTGATGGT  Raphanus raphanistrum subsp. landra
FD575645       <-- TGTGTGAGAAAGGCTCTGCCACATGATATGCCACTAATGGCTGTGATGGT  Raphanus sativus cv Early Scarlet Globe
FD554743       <-- GGTGTGAGAAGGGTTCTGCCACATGATATACCACTAATGGCTGTGATGGT  Raphanus raphanistrum subsp. landra
EV574572       <-- TGTGTGAGAAAGGCTTTGCCACATGATATGCCACTAATGGCTGTGATGGT  Raphanus raphanistrum subsp. landra
EY935207       <-- TGTGTGAGAAAGGCTCTGCCACATGATATGCCACTAATGGCTGTGATGGT  Raphanus sativus cv Early Scarlet Globe
EW720723       <-- ..................CCACATGATATGCCACTAATGGCTGTGATGGT  Raphanus sativus var. oleiformis
FD567223       <-- ..................CCACATGATATGCCACTAATGGCTGTGATGGT  Raphanus sativus var. oleiformis
FD971557       --> TGTGTGAGAAAGGCTCTGCCACATGATATGCCACTAATGGCTGTGATGGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY908960       --> TGTGTGAGAAAGGCTCTGCCACATGATATGCCACTAATGGCTGTGATGGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD947021       --> TGTGTGAGAAAGGCTCTGCCACATGATATGCCACTAATGGCTGTGATGGT  Raphanus sativus cv Early Scarlet Globe
FD562475       --> TGTGTGAGAAAGGCTCTGCCACATGATATGCCACTAATGGCTGTGATGGT  Raphanus sativus var. oleiformis
EX770841       --> GGTGTGAGAAGGGCTCTGCCACATGATATGCCACTAATGGCTGTGATGGT  Raphanus raphanistrum subsp. landra
EX747177       --> GGTGTGAGAAGGGCTCTGCCACATGATATGCCACTAATGGCTGTGATGGT  Raphanus raphanistrum subsp. maritimus
EV525339       --> GGTGTGAGAAGGACTCTGCCACATGATATGCCACTAATGGCTGTGATGGT  Raphanus raphanistrum subsp. maritimus
EV526730       --> GGTGTGAGAAGGGCTCTGCCACATGATATGCCACTAATGGCTGTGATGGT  Raphanus raphanistrum subsp. maritimus
EV529139       --> GGTGTGAGAAGGGCTCTGCCACATGATATGCCACTAATGGCTGTGATGGT  Raphanus raphanistrum subsp. maritimus
EV536359       --> TGTGTGAGAAAGGCTCTGCCACATGATATGCCACTAATGGCTGTGATGGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX763846       --> GGTGTGAGAAGGGCTCTGCCACATGATATGCCACTAATGGCTGTGATGGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX897940       --> TGTGTGAGAAAGGCTCTGCCACATGATATGCCACTAATGGCTGTGATGGT  Raphanus sativus cv Early Scarlet Globe
EY929182       --> GGTGTGAGAAGGGCTCTGCCACATGATATGCCACTAATGGCTGTGATGGT  Raphanus sativus var. oleiformis
EY939229       --> TGTGTGAGAAAGGCTCTGCCACATGATATGCCACTAATGGCTGTGATGGT  Raphanus sativus cv Early Scarlet Globe
FD543649       --> TGTGTGAGAAAGGCTCTGCCACATGATATGCCACTAATGGCTGTGATGGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD946591       --> TGTGTGAGAAAGGCTCTGCCACATGATATGCCACTAATGGCTGTGATGGT  Raphanus sativus cv Early Scarlet Globe
FD986945       --> TGTGTGAGAAAGGCTCTGCCACATGATATGCCACTAATGGCTGTGATGGT  Raphanus raphanistrum subsp. landra
FD989197       --> TGTGTGAGAAAGGCTCTGCCACATGATATGCC-CTAATGGCTGTGGTGGT  Raphanus raphanistrum subsp. landra
FD989204       --> GGTGTGAGAAGGGCTCTGCCACATGATATGCCACTAATGGCTGTGATGGT  Raphanus raphanistrum subsp. landra
EV570220       --> TGTGTGAGAAAGGCTCTGCCACATGATATGCCACTAATGGCTGTGATGGT  Raphanus raphanistrum subsp. landra
EX762493       --> GGTGTGAGAAGGGCTCTGCCACATGATATGCCACTAATGGCTGTGATGGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD571893       --> TGTGTGAGAAAGGCTCTGCCACATGATATGCCACTAATGGCTGTGATGGT  Raphanus sativus cv Early Scarlet Globe
FY438770       --> TGTGTGAGAAAGGCTCTGCCACATGATATGCCACTAATGGCTGTGATGGT  Raphanus sativus cv GSK3-1
EX757863       --> TGTGTGAGAAAGGCTCTGCCACATGATATGCCACTAATGGCTGTGATGGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD558952       --> GGTGTGAGAAGGGCTCTGCCACATGATATACCACTAATGGCTGTGATGGT  Raphanus raphanistrum subsp. landra
FY434463       --> TGTGTGAGAAAGGCTCTGCCACATGATATGCCACTAATGGCTGTGATGGT  Raphanus sativus cv GSK3-1
EW716627       --> TGTGTGAGAAAGGCTCTGCCACATGATATGCCACTAATGGCTGTGATGGT  Raphanus sativus var. oleiformis

               301    -    351
UN13897        --> TCAACAAATAGAGGGGATGCGTGATATCATTACAGAGAAACACGTGTGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD943034       <-- TCAACAAATAGAGGGGATGCGTGATATCATTACAGAGAAACACGTGTGGC
EY904569       <-- TCAACAAATAGAGGGGATGCGTGATATCATTACAGAGAAACACGTGTGGC
EV530116       <-- TCAACAAATAGAGGGGATGCGTGATATCATTACAGAGAAACACGTGTGGC
EV531139       <-- TCAACAAATAGAGGGGATGCGTGATATCATTACAGAGAAACACGTGTGGC
EV532957       <-- TCAACAAATAGAGGGGATGCGTGATATCATTACAGAGAAACACGTGTGGC
EX767881       <-- TCAACAAATAGAGGGGATGCGTGATATCATTACAGAGAAACACGTGTGGC
EX901603       <-- TCAACAAATAGAGAGGATGCGTGATATCATTACAGAGAAACACGTATGGC
EY925679       <-- TCAACAAATAGAGGGGATGCGTGATATCATTACAGAGAAACACGTATGGC
FD983095       <-- TCAACAAATAGAGGGGATGCGTGATATCATTACAGAGAAACACGTATGGC
FD985018       <-- TCAACAAATAGAGGGGATGCGTGATATCATTACAGAGAAACACGTGTGGC
FD575645       <-- TCAACAAATAGAGGGGATGCGTGATATCATTACAGAGAAACACGTGTGGC
FD554743       <-- TCAACAAATAGAGGGGATGCGTGATATCATTACAGAGAAACACGTGTGGC
EV574572       <-- TCAACAAATAGAGGGGATGCGTGATATCATTACAGAGAAACACGTATGGC
EY935207       <-- TCAACAAATAGAGGGGATGCGTGATATCATTACAGAGAAACACGTGTGGC
EW720723       <-- TCAACAAATAGAGGGGATGCGTGATATCATTACAGAGAAACACGTGTGGC
FD567223       <-- TCAACAAATAGAGGGGATGCGTGATATCATTACAGAGAAACACGTGTGGC
FD971557       --> TCAACAAATAGAAGGGATACGTGATATCATTACAGAGAAACACGTGTGGC
EY908960       --> TCAACAAATAGAGGGGATGCGTGATATCATTACAGAGAAACACGTGTGGC
FD947021       --> TCAACAAATAGAGGGGATGCGTGATATCATTACAGAGAAACACGTGTGGC
FD562475       --> TCAACAAATAGAGGGGATGCGTGATATCATTACAGAGAAACACGTGTGGC
EX770841       --> TCAACAAATAGAGGGGATGCGTGATATCATTACAGAGAAACACGTGTGGC
EX747177       --> TCAACAAATAGAGGGGATGCGTGATATCATTACAGAGAAACACGTGTGGC
EV525339       --> TCAACAAATAGAGGGGATGCGTGATATCATTACAGAGAAACACGTGTGGC
EV526730       --> TCAACAAATAGAGGGGATGCGTGATATCATTACAGAGAAACACGTGTGGC
EV529139       --> TCAACAAATAGAGGGGATGCGTGATATCATTACAGAGAAACACGTGTGGC
EV536359       --> TCAACAAATAGAGGGGATGCGTGATATCATTACAGAGAAACACGTGTGGC
EX763846       --> TCAACAAATAGAGGGGATGCGTGATATCATTACAGAGAAACACGTGTGGC
EX897940       --> TCAACAAATAGAGAGGATGCGTGATATCATTACAGAGAAACACGTATGGC
EY929182       --> TCAACAAATAGAGGGGATGCGTGATATCATTACAGAGAAACACGTATGGC
EY939229       --> TCAACAAATAGAGGGGATGCGTGATATCATTACAGAGAAACACGTGTGGC
FD543649       --> TCAACAAATAGAGGGGATGCGTGATATCATTACAGAGAAACACGTGTGGC
FD946591       --> TCAACAAATAGAGGGGATGCGTGATATCATTACAGAGAAACACGTGTGGC
FD986945       --> TCAACAAATAGAGGGGATGCGTGATATCATTACAGAGAAACACGTATGGC
FD989197       --> TCAACAAATAGAGGGGATGCGTGATATCATTACAGAGAAACACGTATGGC
FD989204       --> TCAACAAATAGAGGGGATGCGTGATATCATTACAGAGAAACACGTGTGGC
EV570220       --> TCAACAAATAGAGGGGATGCGTGATATCATTACAGAGAAACACGTATGGC
EX762493       --> TCAACAAATAGAGGGG-TGCGTGATATCATTACAGAGAAACACGTG--GC
FD571893       --> TCAACAAATAGAGGGGATGCGTGATATCATTACAGAGAAACACGTGTGGC
FY438770       --> TCAACAAATAGAGGGGATGCGTGATATCATTACAGAGAAACACGTGTGGC
EX757863       --> TCAACAAATAGAGGGGATGCGTGATATCATTACAGAGAAACACGTGTGGC
FD558952       --> TCAACAAATAGAGGGGATGCGTGATATCATTACAGAGAAACACGTGTGGC
FY434463       --> TCAACAAATAGAGGGGATGCGTGATATCATTACAGAGAAACACGTGTGGC
EW716627       --> TCAACAAATAGAGGGGATGCGTGATATCATTACAGAGAAACACGTGTGGC

               351    -    401
UN13897        --> ATCTAAGTGATAAAGCCATCAAGAATGTCTATTTGTTCTATATCATGTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD943034       <-- ATTTAAGTGATAAAGCCATCAAGAATGTCTATTTGTTCTATATCATGTTC
EY904569       <-- ATCTAAGTGATAAAGCCATCAAGAATGTCTATTTGTTCTATATCATGTTC
EV530116       <-- ATCTAAGTGATAAAGCCATCAAGAATGTCTATTTGTTCTATATCATGTTC
EV531139       <-- ATCTAAGTGATAAAGCCATCAAGAATGTCTATTTGTTCTATATCATGTTC
EV532957       <-- ATTTAAGTGATAAAGCCATCAAGAATGTCTATTTGTTCTGTATCATGTTC
EX767881       <-- ATCTAAGTGATAAAGCCATCAAGAATGTCTATTTGTTCTATATCATGTTC
EX901603       <-- ATCTAAGTGATAAAGCCATCAAGAATGTCTATTTGTTCTATATCATGTTC
EY925679       <-- ATCTAAGTTATAAAGCCATCAAGAATGTCTATTTGTTCTATATCATGTTC
FD983095       <-- ATCTAAGTGATAAAGCCATCAAG----AATATTTGTTCTATATCATGTTC
FD985018       <-- ATCTAAGTGATAAAGCCATCAAGAATGTCTATTTGTTCTATATCATGTTC
FD575645       <-- ATCTAAGTGATAAAGCCATCAAGAATGTCTATTTGTTCTATATCATGTTC
FD554743       <-- ACCTAAGTGATAAAGCCATCAAGAATGTCTATTTGTTCTATATCATGTTC
EV574572       <-- A.................................................
EY935207       <-- ATTTAAGTGATAAAGCCATCAAGAATGTCTATTTGTTCTATATCATGTTC
EW720723       <-- ATTTAAGTGATAAAGCCATCAAGAATGTCTATTTGTTTTATATCATGTTC
FD567223       <-- ATTTAAGTGATAAAGCCATCAAGAATGTCTATTTGTTCTATATCATGTTC
FD971557       --> ATCTAAGTGATAAAGCCATCAAGAATGTCTATTTGTTCTATATCATGTTC
EY908960       --> ATCTAAGTGATAAAGCCATCAAGAATGTCTATTTGTTCTATATCATGTTC
FD947021       --> ATCTAAGTGATAAAGCCATCAAGAATGTCTATTTGTTCTATATCATGTTC
FD562475       --> ATCTAAGTGATAAAGCCATCAAGAATGTCTATTTGTTCTATATCATGTTC
EX770841       --> ATCTAAGTGATAAAGCCATCAAGAATGTCTATTTGTTCTATATCATGTTC
EX747177       --> ATCTAAGTGATAAAGCCATCAAGAATGTCTATTTGTTCTATATCATGTTC
EV525339       --> ATCTAAGTGATAAAGCCATCAAGAATGTCTATTTGTTCTATATCATGTTC
EV526730       --> ATCTAAGTGATAAAGCCATCAAGAATGTCTATTTGTTCTATATCATGTTC
EV529139       --> ATCTAAGTGATAAAGCCATCAAGAATGTCTATTTGTTCTGTATCATGTTC
EV536359       --> ATCTAAGTGATAAAGCCATCAAGAATGTCTATTTGTTCTATATCATGTTC
EX763846       --> ATCTAAGTGATAAAGCCATCAAGAATGTCTATTTGTTCTATATCATGTTC
EX897940       --> ATCTAAGTGATAAAGCCATCAAGAATGTCTATTTGTTCTATATCATGTTC
EY929182       --> ATCTAAGTTATAAAGCCATCAAGAATGTCTATTTGTTCTATATCATGTTC
EY939229       --> ATCTAAGTGATAAAGCCATCAAGAATGTCTATTTGTTCTATATCATGTTC
FD543649       --> ATCTAAGTGATAAAGCCATCAAGAATGTCTATTTGTTCTATATCATGTTC
FD946591       --> ATCTAAGTGATAAAGCCATCAAGAATGTCTATTTGTTCTATATCATGTTC
FD986945       --> ATCTAAGTGATAAAGCCATCAAGAAT----ATTTGTTCTATATCATGTTC
FD989197       --> ATCTAAGTGATAAAGCCATCAAGAATGTCTATTTGTTCTATATCATGTTC
FD989204       --> ATCTAAGTGATAAAGCCATCAAGAATGTCTATTTGTTCTATATCATGTTC
EV570220       --> ATCTAAGTGATAAAGCCATCAAGAATGTCTATTTGTTCTATATCATGTTC
EX762493       --> ATCTAA-TGATAAAGCatca..............................
FD571893       --> ATCTAAGTGATAAAGCCATCAAGAATGTCTATTTGTTCTATATCATGTTC
FY438770       --> ATCTAAGTGATAAAGCCATCAAGAATGTCTATTTGTTCTATATCATGTTC
EX757863       --> ATCTAAGTGATAAAGCCGTCAAGAATGTCTATTTGTTCTATATCATGTTC
FD558952       --> ACCTAAGTGATAAAGCCATCAAGAATGTCTATTTGTTCTATATCATGTTC
FY434463       --> ATCTAAGTGATAAAGCCATCAAGAATGTCTATTTGTTCTATATCATGTTC
EW716627       --> ATCTAAGTGATAAAGCCATCAAGAATGTCTATTTGTTCTATATCATGTTC

               401    -    451
UN13897        --> ACTTGTTGGGGATGTCTGTACTTCGGTTCCGCAAAAGATCCATTCTATGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD943034       <-- ACTTGTTGGGGATGTCTGTACTTCGGTTCCGCAAAAGATCCATTTTATGA
EY904569       <-- ACTTGTTGGGGATGTCTGTACTTCGGTTCCGCAAAAGATCCATTCTATGA
EV530116       <-- ACTTGTTGGGGATGTCTGTACTTCGGTTCCGCAAAAGATCCATTCTATGA
EV531139       <-- ACTTGTTGGGGATGTCTGTACTTCGGTTCCGCAAAAGATCCATTCTATGA
EV532957       <-- ACTTGTTGGGGATGTCTGTACTTCGGTTCCGCAAAAGATCCATTCTATGA
EX767881       <-- ACTTGTTGGGGATGTCTGTACTTCGGTTCCGCAAAAGATCCATTCTATGA
EX901603       <-- ACTTGTTGGGGATGTCTGTACTTCGGTTCCGCAAAAGATCCATTCTATGA
EY925679       <-- ACTTGTTGGGGATGTCTGTACTTCGGTTCCGCAAAAGATCCATTCTATGA
FD983095       <-- ACTTGTTGGGGATGTCTGTACTTCGGTTCCGCAAAAGATCCATTCTATGA
FD985018       <-- ACTTGTTGGGGATGTCTGTACTTCGGTTCCGCAAAAGATCCATTCTATGA
FD575645       <-- ACTTGTTGGGGATGTCTGTACTTCGGTTCCGCAAAAGATCCATTCTATGA
FD554743       <-- ACTTGTTGGGGATGTCTGTACTTCGGTTCCGCAAAAGATCCATTCTATGA
EV574572       <-- ..................................................
EY935207       <-- ACTTGTTGGGGATGTCTGTACTTCGGTTCCGCAAAAGATCCATTCTATGA
EW720723       <-- ACTTGTTGGGGATGTCTGTACTTCGGTTCCGCAAAAGATCCATTTTATGA
FD567223       <-- ACTTGTTGGGGATGTCTGTACTTCGGTTCCGCAAAAGATCCATTTTATGA
FD971557       --> ACTTGTTGGGGATGTCTGTACTTCGGTTCCGCAAAAGATCCATTCTATGA
EY908960       --> ACTTGTTGGGGATGTCTGTACTTCGGTTCCGCAAAAGATCCATTCTATGA
FD947021       --> ACTTGTTGGGGATGTCTGTACTTCGGTTCCGCAAAAGATCCATTCTATGA
FD562475       --> ACTTGTTGGGGATGTCTGTACTTCGGTTCCGCAAAAGATCCATTCTATGA
EX770841       --> ACTTGTTGGGGATGTCTGTACTTCGGTTCCGCAAAAGATCCATTCTATGA
EX747177       --> ACTTGTTGGGGATGTCTGTACTTCGGTTCCGCAAAAGATCCATTCTATGA
EV525339       --> ACTTGTTGGGGATGTCTGTACTTCGGTTCCGCAAAAGATCCATTCTATGA
EV526730       --> ACTTGTTGGGGATGTCTGTACTTCGGTTCCGCAAAAGATCCATTCTATGA
EV529139       --> ACTTGTTGGGGATGTCTGTACTTCGGTTCCGCAAAAGATCCATTCTATGA
EV536359       --> ACTTGTTGGGGATGTCCGTACTTCGGTTCCGCAAAAGATCCATTCTATGA
EX763846       --> ACTTGTTGGGGATGTCTGTACTTCGGTTCCGCAAAAGATCCATTCTATGA
EX897940       --> ACTTGTTGGGGATGTCTGTACTTCGGTTCCGCAAAAGATCCATTCTATGA
EY929182       --> ACTTGTTGGGGATGTCTGTACTTCGGTTCCGCAAAAGATCCATTCTATGA
EY939229       --> ACTTGTTGGGGATGTCTGTACTTCGGTTCCGCAAAAGATCCATTCTATGA
FD543649       --> ACTTGTTGGGGATGTCTGTACTTCGGTTCCGCAAAAGATCCATTCTATGA
FD946591       --> ACTTGTTGGGGATGTCTGTACTTCGGTTCCGCAAAAGATCCATTCTATGA
FD986945       --> ACTTGTTGGGGATGTCTGTACTTCGGTTCCGCAAAAGATCCATTCTATGA
FD989197       --> ACTTGTTGGGGATGTCTGTACTTCGGTTCCGCAAAAGATCCATTCTATGA
FD989204       --> ACTTGTTGGGGATGTCTGTACTTCGGTTCCGCAAAAGATCCATTCTATGA
EV570220       --> ACTTGTTGGGGATGTCTGTACTTCGGTTCCGCAAAAGATCCATTCTATGA
EX762493       --> ..................................................
FD571893       --> ACTTGTTGGGGATGTCTGTACTTCGGTTCCGCAAAAGATCCATTCTATGA
FY438770       --> ACTTGTTGGGGATGTCTGTACTTCGGTTCCGCAAAAGATCCATTCTATGA
EX757863       --> ACTTGTTGGGGATGTCTGTACTTCGGTTCCGCAAAAGATCCATTCTATGA
FD558952       --> ACTTGTTGGGGATGTCTGTACTTCGGTTCCGCAAAAGATCCATTCTATGA
FY434463       --> ACTTGTTGGGGATGTCTGTACTTCGGTTCCGCAAAAGATCCATTCTATGA
EW716627       --> ACTTGTTGGGGATGTCTGTACTTCGGTTCCGCAAAAGATCCATTCTATGA

               451    -    501
UN13897        --> TTCGGAGGAGTACCGTGGAGATGGAGGTGATGGAACTGGATATTGGGTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD943034       <-- TTCGGAGGAGTACCGTGGAGATGGAGGTGATGGAACTGGATACTGGGTCT  Raphanus sativus cv Early Scarlet Globe
EY904569       <-- TTCGGAGGAGTACCATGGAGATGGAGGTGATGGAACTGGATACTGGGTCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV530116       <-- TTCGGAGGAGTACCGTGGAGATGGAGGTGATGGAACTGGATATTGGGTCT  Raphanus raphanistrum subsp. maritimus
EV531139       <-- TTCG--GGAGTACCGTGGAGATGGAGGTGATGGAACTGGATATTGGGTCT  Raphanus raphanistrum subsp. maritimus
EV532957       <-- TTCGGAGGAGTACCGTGGAGATGGAGGTGATGGAACTGGATATTGGGTCT  Raphanus raphanistrum subsp. maritimus
EX767881       <-- TTCGGAGGAGTACCGTGGAGATGGAGGTGATGGAACTGGATATTGGGTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX901603       <-- TTCGGAGGAGTACCGTGGAGATGGAGGTGATGGAACTGGATATTGGGTCT  Raphanus sativus cv Early Scarlet Globe
EY925679       <-- TTCGGAGGAGTACCGTGGAGATGGAGGTGATGGAACTGGATATTGGGTCT  Raphanus sativus var. oleiformis
FD983095       <-- TTCGGAGGAGTACCGTGGAGATGGAGGTGATGGAACTGGATATTGGGTCT  Raphanus raphanistrum subsp. landra
FD985018       <-- TCCGGAGGAGTACCGTGGAGATGGAGGTGATGGAACTGGATATTGGGTCT  Raphanus raphanistrum subsp. landra
FD575645       <-- TTCGGAGGAGTACCGTGGAGATGGAGGTGATGGAACTGGATACTGGGTCT  Raphanus sativus cv Early Scarlet Globe
FD554743       <-- TTCGGAGGAGTACCGTGGAGATGGAGGTGATGGAACTGGATATTGGGTCT  Raphanus raphanistrum subsp. landra
EV574572       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY935207       <-- TTCGGAGGAGTACCGTGGAGATGGAGGTGATGGAACTGGATACTGGGTCT  Raphanus sativus cv Early Scarlet Globe
EW720723       <-- TTCGGAGGAGTACCGTGGAGATGGAGGTGATGGAACTGGATACTGGGTTT  Raphanus sativus var. oleiformis
FD567223       <-- TTCGGAGGAGTACCGTGGAGATGGAGGTGATGGAACTGGATACTGGGTCT  Raphanus sativus var. oleiformis
FD971557       --> TTCGGAGGAGTACCGTGGAGATGGAGGTGATGGAACTGGATACTGGGTCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY908960       --> TTCGGAGGAGTACCATGGAGATGGAGGTGATGGAACTGGATACTGGGTCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD947021       --> TTCGGAGGAGTACCGTGGAGATGGAGGTGATGGAACTGGATACTGGGTCT  Raphanus sativus cv Early Scarlet Globe
FD562475       --> TTCGGAGGAGTACCGTGGAGATGGAGGTGATGGAACTGGATACTGGGTCT  Raphanus sativus var. oleiformis
EX770841       --> TTCGGAGGAGTACCGTGGAGATGGAGGTGATGGAACTGGATATTGGGTCT  Raphanus raphanistrum subsp. landra
EX747177       --> TTCGGAGGAGTACCGTGGAGATGGAGGTGATGGAACTGGATATTGGGTCT  Raphanus raphanistrum subsp. maritimus
EV525339       --> TTCGGAGGAGTACCGTGGAGATGGAGGTGATGGAACTGGATATTGGGTCT  Raphanus raphanistrum subsp. maritimus
EV526730       --> TTCGG--GAGTACCGTGGAGATGGAGGTGATGGAACTGGATATTGGGTCT  Raphanus raphanistrum subsp. maritimus
EV529139       --> TTCGGAGGAGTACCGTGGAGATGGAGGTGATGGAACTGGATATTGGGTCT  Raphanus raphanistrum subsp. maritimus
EV536359       --> TTCGGAGGAGTACCGTGGAGATGGAGGTGATGGAACTGGATACTGGGTCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX763846       --> TTCGGAGGAGTACCGTGGAGATGGAGGTGATGGAACTGGATATTGGGTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX897940       --> TTCGGAGGAGTACCGTGGAGATGGAGGTGATGGAACTGGATATTGGGTCT  Raphanus sativus cv Early Scarlet Globe
EY929182       --> TTCGGAGGAGTACCGTGGAGATGGAGGTGATGGAACTGGATATTGGGTCT  Raphanus sativus var. oleiformis
EY939229       --> TTCGGAGGAGTACCGTGGAGATGGAGGTGATGGAACTGGATACTGGGTCT  Raphanus sativus cv Early Scarlet Globe
FD543649       --> TTCGGAGGAGTACCGTGGAGATGGAGGTGATGGAACTGGATACTGGGTCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD946591       --> TTCGGAGGAGTACCGTGGAGATGGAGGTGATGGAACTGGATACTGGGTCT  Raphanus sativus cv Early Scarlet Globe
FD986945       --> TTCGGAGGAGTACCGTGGAGATGGAGGTGATGGAACTGGATATTGGGTCT  Raphanus raphanistrum subsp. landra
FD989197       --> TTCGGAGGAGTACCGTGGAGATGGAGGTGATGGAACTGGATATTGGGTCT  Raphanus raphanistrum subsp. landra
FD989204       --> TCCGGAGGAGTACCGTGGAGATGGAGGTGATGGAACTGGATATTGGGTCT  Raphanus raphanistrum subsp. landra
EV570220       --> TTCGGAGGAGTACCGTGGAGATGGAGGTGATGGAACTGGATATTGGGTCT  Raphanus raphanistrum subsp. landra
EX762493       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD571893       --> TTCGGAGGAGTACCGTGGAGATGGAGGTGATGGAACTGGATACTGGGTCT  Raphanus sativus cv Early Scarlet Globe
FY438770       --> TTCGGAGGAGTACCGTGGAGATGGAGGTGATGGAACTGGATACTGGGTCT  Raphanus sativus cv GSK3-1
EX757863       --> TTCGGAGGAGTACCGTGGAGATGGAGGTGATGGAACTGGATACTGGGTCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD558952       --> TTCGGAGGAGTACCGTGGAGATGGAGGTGATGGAACTGGATATTGGGTCT  Raphanus raphanistrum subsp. landra
FY434463       --> TTCGGAGGAGTACCGTGGAGATGGAGGTGATGGAACTGGATACTGGGTCT  Raphanus sativus cv GSK3-1
EW716627       --> TTCGGAGGAGTACCGTGGAGATGGAGGTGATGGAACTGGATACTGGGTCT  Raphanus sativus var. oleiformis

               501    -    551
UN13897        --> ATGAAACTCAAGAAGACATAGAAGAGAAGGCAAGAGCAGAGCTATGGCGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD943034       <-- ATGAAACTCAAGAAGACATAGAAGAGAAGGCAAGAGCAGAGCTATGGCGT
EY904569       <-- ATGAAACTCAAGAAGACATAGAAGAGAAGGCAAGAGCAGAGCTATGGCGT
EV530116       <-- ATGAAACTCAAGAAGACATAGAAGAGAAGGCAAGAGCAGAGCTATGGCGT
EV531139       <-- ATGAAACTCAAGAAGACATAGAAGAGAAGGCAAGAGCAGAGCTATGGCGT
EV532957       <-- ATGAAACTCAAGAAGACATAGAAGAGAAGGCAAGAGCAGAGCTATGGCGT
EX767881       <-- ATGAAACTCAAGAAGACATAGAAGAGAAGGCAAGAGCAGAGCTATGGCGT
EX901603       <-- ATGAAACTCAAGAAGACATAGAAGAGAAGGCAAGAGCAGAGCTATGGCGT
EY925679       <-- ATGAAACTCAAGAAGACATAGAAGAGAAGGCAAGAGCAGGGCTATGGCGT
FD983095       <-- ATGAAACTCAAGAAGACATAGAAGAGAAGGCAAGAGCAGAGCTATGGCGT
FD985018       <-- ATGAAACTCAAGAAGACATAGAAGAGAAGGCAAGAGCAGAGCTATGGCGT
FD575645       <-- ATGAAACTCAAGAAGACATAGAAGAGAAGGCAAGAGCAGAGCTATGGCGT
FD554743       <-- ATGAAACTCAAGAAGACATATAAGAGAAGGCAAGAGCAGAGCTATGGCGT
EV574572       <-- ..................................................
EY935207       <-- ATGAAACTCAAGAAGACATAGAAGAGAAGGCAAGAGCAGAGCTATGGCGT
EW720723       <-- ATGAAACTCAAGAAGACATAGAAGAGAAGGCAAGAGCAGAGCTATGGCGT
FD567223       <-- ATGAAACTCAAGAAGACATAGAAGAGAAGGCAAGAGCAGAGCTATGGCGT
FD971557       --> ATGAAACTCAAGAAGACATAGAAGAGAAGGCAAGAGCAGAGCTATGGCGT
EY908960       --> ATGAAACTCAAGAAGACATAGAAGAGAAGGCAAGAGCAGAGCTATGGCGT
FD947021       --> ATGAAACTCAAGAAGACATAGAAGAGAAGGCAAGAGCAGAGCTATGGCGT
FD562475       --> ATGAAACTCAAGAAGACATAGAAGAGAAGGCAAGAGCAGAGCTATGGCGT
EX770841       --> ATGAAACTCAAGAAGACATAGAAGAGAAGGCAAGAGCAGAGCTATGGCGT
EX747177       --> ATGAAACTCAAGAAGACATAAAAGAGAAGGCAAGAGCAGAGCTATGGCGT
EV525339       --> ATGAAACTCAAGAAGACATAGAAGAGAAGGCAAGAGCAGAGCTATGGCGT
EV526730       --> ATGAAACTCAAGAAGACATAGAAGAGAAGGCAAGAGCAGAGCTATGGCGT
EV529139       --> ATGAAACTCAAGAAGACATAGAAGAGAAGGCAAGAGCAGAGCTATGGCGT
EV536359       --> ATGAAACTCAAGAAGACATAGAAGAGAAGGCAAGAGCAGAGCTATGGCGT
EX763846       --> ATGAAACTCAAGAAGACATAGAAGAGAAGGCAAGAGCAGAGCTATGGCGT
EX897940       --> ATGAAACTCAAGAAGACATAGAAGAGAAGGCAAGAGCAGAGCTATGGCGT
EY929182       --> ATGAAACTCAAGAAGACATAGAAGAGAAGGCAAGAGCAGGGCTATGGCGT
EY939229       --> ATGAAACTCAAGAAGACATAGAAGAGAAGGCAAGAGCAGAGCTATGGCGT
FD543649       --> ATGAAACTCAAGAAGACATAGAAGAGAAGGCAAGAG..............
FD946591       --> ATGAAACTCAAGAAGACATAGAAGAGAAGGCAAGAGCAGAGCTATGGCGT
FD986945       --> ATGAAACTCAAGAAGACATAGAAGAGAAGGCAAGAGCAGAGCTATGGCGT
FD989197       --> ATGAAGCTCAAGAAGACATAGAAGAGAAGGCAAGAGCAGAGCTATGGCGT
FD989204       --> ATGAAACTCAAGAAGACATAGAAGAGAAGGCAAGAGCAGAGCTATGGCGT
EV570220       --> ATGAAACTCAAGAAGACATAGAAGAGAAGGCAAGAGCAGAGCTATGGCGT
EX762493       --> ..................................................
FD571893       --> ATGAAACTCAAGAAGACATAGAAGAGAAGGCAAGAGCAGAGCTATGGCGT
FY438770       --> ATGAAACTCAAGAAGACATAGAAGAGAAGGCAAGAGCAGAGCTATGGCGT
EX757863       --> ATGAAACTCAAGAAGACATAGAAGAGAAGGCAAGAGCAGAGCTATGGCGT
FD558952       --> ATGAAACTCAAGAAGACATATAAGAGAAGGCAAGAGCAGAGCTATGGCGT
FY434463       --> ATGAAACTCAAGAAGACATAGAAGAGAAGGCAAGAGCAGAGCTATGGCGT
EW716627       --> ATGAAACTCAAGAAGACATAGAAGAGAAGGCAAGAGCAGAGCTATGGCGT

               551    -    601
UN13897        --> GAAGAGCTTATCGAAGAAATTGAACAGAAAGTTGGTGGTTTAAGAGAGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD943034       <-- GAAGAGCTTATCGAAGAAATTGAACAGAAAGTTGGTGGTTTAAGAGAGCT
EY904569       <-- GAAGAGCTTATCGAAGAAATTGAACAGAAAGTTGGTGGTTTAAGAGAGCT
EV530116       <-- GAAGAGCTTATCGAAGAAATTGAACAGAAAGTTGGTGGTTTATGAGAGCT
EV531139       <-- GAAGAGCTTATCGAAGAAATTGAACAGAAAGTTGGTGGTTTAAGAGAGCT
EV532957       <-- GAAGAGCTTATCGAAGAAATTGAACAGAAAGTTGGTGGTTTAAGAGAGCT
EX767881       <-- GAAGAGCTTATCGAAGAAATTGAACAGAAAGTTGGTGGTTTAAGAGAGCT
EX901603       <-- GAAGAGCTTATCGAAGAAATTGAACAGAAAGTTGGTGGTTTAAGAGAGCT
EY925679       <-- GAAGAGCTTATCGAAGAAATTGAACAGAAAGTTGGTGGTTTAAGAGAGCT
FD983095       <-- GAAGAGCTTATCGAAGAAATTGAACAGAAAGTTGGTGGTTTAAGAGAGCT
FD985018       <-- GAAGAGCTTATCGAAGAGATTGAACAGAAAGTTGGTGGTTTAAGAGAGCT
FD575645       <-- GAAGAGCTTATCGAAGAAATTGAACAGAAAGTTGGTGGTTTAAGGGAGCT
FD554743       <-- GAAGAGCTTATCGAAGAAATTGAACAGAAAGTTGGTGGTTTAAGAGAGCT
EV574572       <-- ..................................................
EY935207       <-- GAAGAGCTTATCGAAGAAATTGAACAGAAAGTTGGTGGTTTAAGAGAGCT
EW720723       <-- GAAGAGCTTATCGAAGAAATTGAACAGAAAGTTGGTGGTTTAAGAGAGCT
FD567223       <-- GAAGAGCTTATCGAAGAAATTGAACAGAAAGTTGGTGGTTTAAGAGAGCT
FD971557       --> GAAGAGCTTATCGAAGAAATTGAACAGAAAGTTGGT..............
EY908960       --> GAAGAGCTTATCGAAGAAATTGAACAGAAAGTTGGTGGTTTAAGAGAGCT
FD947021       --> GAAGAGCTTATCGAAGAAATTGAACAGAAAGTTGGTGGTTTAAGAGAGCT
FD562475       --> GAAGAGCTTATCGAAGAAATTGAA..........................
EX770841       --> GAAGAGCTTATCGAAGAAATTGAACAGAAAGTTGGTGGTTTAAGAGAGCT
EX747177       --> GAAGAGCTTATCGAAGAAATTGAACAGAAAGTTGGTGGTTTAAGAGAGCT
EV525339       --> GAAGAGCTTATCGAAGAAATTGAACAGAAAGTTGGTGGTTTATGAGAGCT
EV526730       --> GAAGAGCTTATCGAAGAAATTGAACAGAAAGTTGGTGGTTTAAGAGAGCT
EV529139       --> GAAGAGCTTATCGAAGAAATTGAACAGAAAGTTGGTGGTTTAAGAGAGCT
EV536359       --> GAAGAGCTTATCGAAGAAATTGAACAGAAAGTTGGTGGTTTAAGAGAGCT
EX763846       --> GAAGAGCTTATCGAAGAAATTGAACAGAAAGTTGGTGGTTTAAGAGAGCT
EX897940       --> GAAGAGCTTATCGAAGAAATTGAACAGAAAGTTGGTGGTTTAAGAGAGCT
EY929182       --> GAAGAGCTTATCGAAGAAATTGAACAGAAAGTTGGTGGTTTAAGAGAGCT
EY939229       --> GAAGAGCTTATCGAAGAAATTGAACAGAAAGTTGGTGGTTTAAGAGAGCT
FD543649       --> ..................................................
FD946591       --> GAAGAGCTTATCGAAGAAATTGAACAGAAAGTTGGTGGTTTAAGAGAGCT
FD986945       --> GAAGAGCTTATCGAAGAAATTGAACAGAAAGTTGGTGGTTTAAGAGAGCT
FD989197       --> GAAGAGCTTATCGAAGAAATTGAACAGAAAGTTGGTGGTTTAAGAGAGCT
FD989204       --> GAAGAGCTTATCGAAGAGATTGAACAGAAAGTTGGTGGTTTAAGAGAGCT
EV570220       --> GAAGAGCTTATCGAAGAAATTGAACAGAAAGTTGGTGGTTTAAGAGAGCT
EX762493       --> ..................................................
FD571893       --> GAAGAGCTTATCGAAGAAATTGAACAGAAAGTTGGTGGTTTAAGGGAGCT
FY438770       --> GAAGAGCTTATCGAAGAAATTGAACAGAAAGTTGGTGGTTTAAGAGAGCT
EX757863       --> GAAGAGCTTATCGAAGAAATTGAACAGAAAGTTGGTGGTTTAAGAGAGCT
FD558952       --> GAAGAGCTTATCGAAGAAATTGAACAGAAAGTTGGTGGTTTAAGAGAGCT
FY434463       --> GAAGAGCTTATCGAAGAAATTGAACAGAAAGTTGGTGGTTTAAGAGAGCT
EW716627       --> GAAGAGCTTATCGAAGAAATTGAACAGAAAGTTGGTGGTTTAAGAGAGCT

               601    -    651
UN13897        --> CGAAGAAGCTGTTAATAAGTAGACAACTAACATGTGAATCATACAGAAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD943034       <-- CGAAGAAGCTGTTAATAAGTAGACAACTAACATGTAAATCATACACAAAT  Raphanus sativus cv Early Scarlet Globe
EY904569       <-- CGAAGAAGCTGTTAATAAGTAGACAACTAACATGTGAATCATACACAAAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV530116       <-- CGAAGAAGCTGTTAATAAGTAGACAACTAACATGTGAATCATACAGAAAT  Raphanus raphanistrum subsp. maritimus
EV531139       <-- CGAAGAAGCTGTTAATAAGTAGACAACTAACATGTGAATCATACAGAAAT  Raphanus raphanistrum subsp. maritimus
EV532957       <-- CGAAGAAGCTGTTAATAAGTAGACAACTAACATGTGAATCATACAGAAAT  Raphanus raphanistrum subsp. maritimus
EX767881       <-- CGAAGAAGCTGTTAATAAGTAGACAACTAACATGTGAATCATACAGAAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX901603       <-- CGAAGAAGCTGTTAATAAGTAGACAACTAACATGTGAATCATACAGAAAT  Raphanus sativus cv Early Scarlet Globe
EY925679       <-- CGAAGAAGCTGTTAATAAGTAGACAACTAACATGTGAATCATACAGAAAT  Raphanus sativus var. oleiformis
FD983095       <-- CGAAGAAGCTGTTAATAAGTAGACAACTAACATGTGAATCATACAGAAAT  Raphanus raphanistrum subsp. landra
FD985018       <-- CGAAGAAGCTGTTAATAAGTAGACAACTAACATGTGAATCATACAGAAAT  Raphanus raphanistrum subsp. landra
FD575645       <-- CGAAGAAGCTGTTAATAAGTAGACAACTAACATGTAAATCATACACAAAT  Raphanus sativus cv Early Scarlet Globe
FD554743       <-- CGAAGAAGCTGTTAATAAGTAGACAACTAACATGTGAATCATACAGAAAT  Raphanus raphanistrum subsp. landra
EV574572       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY935207       <-- CGAAGAAGCTGTTAATAAGTAGACAACTAACATGTAAATCATACACAAAT  Raphanus sativus cv Early Scarlet Globe
EW720723       <-- CGAAGAAGCTGTTAATAAGTAGACAACTAACATGTAAATCATACACAAAT  Raphanus sativus var. oleiformis
FD567223       <-- CGAAGAAGCTGTTAATAAGTAGACAACTAACATGTAAATCATACACAAAT  Raphanus sativus var. oleiformis
FD971557       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY908960       --> CGAAGAAGCTGTTAATAAGTAGACAACTAACATGTGAATCAT........  Raphanus raphanistrum subsp. raphanistrum (MS)
FD947021       --> CGAAG.............................................  Raphanus sativus cv Early Scarlet Globe
FD562475       --> ..................................................  Raphanus sativus var. oleiformis
EX770841       --> CGAAGAAGCTGTTAATAAGTAGACAACTAACATGTGAATCATACAGAAAT  Raphanus raphanistrum subsp. landra
EX747177       --> CGAAGAAGCTGTTAATAAGTAGACAACTAACATGTGAATCATACAGAAAT  Raphanus raphanistrum subsp. maritimus
EV525339       --> CGAAGAAGCTGTTAATAAGTAGACAACTAACATGTGAATCATACAGAAAT  Raphanus raphanistrum subsp. maritimus
EV526730       --> CGAAGAAGCTGTTAATAAGTAGACAACTAACATGTGAATCATACAGAAAT  Raphanus raphanistrum subsp. maritimus
EV529139       --> CGAAGAAGCTGTTAATAAGTAGACAACTAACATGTGAATCATACAGAAAT  Raphanus raphanistrum subsp. maritimus
EV536359       --> CGAAGAAGCTGTTAATAAGTAGACAACTAACATGTGAATCATACACAAAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX763846       --> CGAAGAAGCTGTTAATAAGTAGACAACTAACATGTGAATCATACAGAAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX897940       --> CGAAGAAGCTGTTAATAAGTAGACAACTAACATGTGAATCATACAGAAAT  Raphanus sativus cv Early Scarlet Globe
EY929182       --> CGAAGAAGCTGTTAATAAGTAGACAACTAACATGTGAATCATACAGAAAT  Raphanus sativus var. oleiformis
EY939229       --> CGAAGAAGCTGTTAATAAGTAGACAACTAACATGTAAATCATACACAAAT  Raphanus sativus cv Early Scarlet Globe
FD543649       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD946591       --> CGAAGAAGCTGTTAATAAGTAGACAACTAACATGTAAATCATACACAAAT  Raphanus sativus cv Early Scarlet Globe
FD986945       --> CGAAGAAGCTGTTAATAAGTAGACAACTAACATGTGAATCATACAGAAAT  Raphanus raphanistrum subsp. landra
FD989197       --> CGAAGAAGCTGTTAATAAGTAGACAACTAACATGTGAATCATACAGAAAT  Raphanus raphanistrum subsp. landra
FD989204       --> CGAAGAAGCTGTTAATAAGTAGACAACTAACATGTGAATCATACAGAAAT  Raphanus raphanistrum subsp. landra
EV570220       --> CGAAGAAGCTGTTAATAAGTAGACAACTAACATGTGAATCATACAGAAAT  Raphanus raphanistrum subsp. landra
EX762493       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD571893       --> CGAAGAAGCTGTTAATAAGTAGACAACTAACATGTAAATCATACACAAAT  Raphanus sativus cv Early Scarlet Globe
FY438770       --> CGAAGAAGCTGTTAATAAGTAGACAACTAACATGTAAATCATACACAAAT  Raphanus sativus cv GSK3-1
EX757863       --> CGAAGAAGCTGTTAATAAGTAGACAACTAACATGTGAATCATACACAAAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD558952       --> CGAAGAAGCTGTTAATAAGTAGACAACTAACATGTGAATCATACAGAAAT  Raphanus raphanistrum subsp. landra
FY434463       --> CGAAGAAGCTGTTAATAAGTAGACAACTAACATGTAAATCATACACAAAT  Raphanus sativus cv GSK3-1
EW716627       --> CGAAGAAGCTGTTAATAAGTAGACAACTAACATGTAAATCATACACAAAT  Raphanus sativus var. oleiformis

               651    -    701
UN13897        --> TATACATATGTAAAATATTGTTTTCTGATAATGGTCATAAACCACTCTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD943034       <-- TATAAATATGTATAATATTGTTTTCTGAT.....................  Raphanus sativus cv Early Scarlet Globe
EY904569       <-- TATACATATGTAAAATATTGTTTTCTGATAATGGTTATAAACCACTCTTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV530116       <-- TATACATATGTAAAATATTGTTTTCTGATAATGGTCATAAACCACTCTTC  Raphanus raphanistrum subsp. maritimus
EV531139       <-- TATACATATGTAAAATATTGTTTTCTGATAATGGTCATAAACCACTCTTC  Raphanus raphanistrum subsp. maritimus
EV532957       <-- TATACATATGTAAAATATTGTTTTCTGATAATGGTCATAAACCACTCTTC  Raphanus raphanistrum subsp. maritimus
EX767881       <-- TATACATATGTAAAATATTGTTTTCTGATAATGGTCATAAACCACTCTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX901603       <-- TATACATATGTAAAATATTGTTTTCTGATAATGGTCATAAGCCACTCTTC  Raphanus sativus cv Early Scarlet Globe
EY925679       <-- TATACATATGTAAAATATTGTTTTCTGATAA...................  Raphanus sativus var. oleiformis
FD983095       <-- TATACATATGTAAAATATTGTTTTCTGATAATGGTCATAAACCACTCTTC  Raphanus raphanistrum subsp. landra
FD985018       <-- TATACATATGTAAAATATTGTTTTCTGATAATGGTCATAAACCACTCTTC  Raphanus raphanistrum subsp. landra
FD575645       <-- TATAAATATGTATAATATTGTTTTCTGATAATGGTCATAAACCACTCTTC  Raphanus sativus cv Early Scarlet Globe
FD554743       <-- TATACATATGTAAAATATTGTTTTCTGATAATGGTCATAAACCACTCTTC  Raphanus raphanistrum subsp. landra
EV574572       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY935207       <-- TATAAATATGTATAATATTGTTTTCTGATAATGGTCATAAACCACTCTTC  Raphanus sativus cv Early Scarlet Globe
EW720723       <-- TATAAATATGTATAATATTGTTTTTTGATAATGGTCATAAACCACTCTTC  Raphanus sativus var. oleiformis
FD567223       <-- TATAAATATGTATAATATTGTTTTCTGATAATGGTCATAAACCACTCTTC  Raphanus sativus var. oleiformis
FD971557       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY908960       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD947021       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD562475       --> ..................................................  Raphanus sativus var. oleiformis
EX770841       --> TATACATATGTAAAATATTGTTTTCTGATAATGGTCATAAACCACTCTTC  Raphanus raphanistrum subsp. landra
EX747177       --> TATACATATG........................................  Raphanus raphanistrum subsp. maritimus
EV525339       --> TATACATATGTAAAATATTGTTTTCTGATAATGGTCATAAACCACTCTTC  Raphanus raphanistrum subsp. maritimus
EV526730       --> TATACATATGTAAAATATTGTTTTCTGATAATGGTCATAAACCACTCTTC  Raphanus raphanistrum subsp. maritimus
EV529139       --> TATACATATGTAAAATATTGTTTTCTGATAATGGTCATAAACCACTCTTC  Raphanus raphanistrum subsp. maritimus
EV536359       --> TATACATATGTAAAATATTGTTTTCTGATAATGGTCATAAACCACTCTTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX763846       --> TATACATATGTAAAATATTGTTTTCTGATAATGGTCATAAACCACTCTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX897940       --> TATACATATGTAAAATATTGTTTTCTGATAATGGTCATAAGCCACTCTTC  Raphanus sativus cv Early Scarlet Globe
EY929182       --> TATACATATGTAAAATATTGTTTTCTGATAATGGTCATAAACCACTCTTC  Raphanus sativus var. oleiformis
EY939229       --> TATAAATATGTATAATATTGTTTTCTGATAATGGTCATAAACCACTCTTC  Raphanus sativus cv Early Scarlet Globe
FD543649       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD946591       --> TATAAATATGTATAATATTGTTTTCTGATAATGGTCATAAACCACTCTTC  Raphanus sativus cv Early Scarlet Globe
FD986945       --> TATACATATGTAAAATATTGTTTTCTGATAATGGTCATAAACCACTCTTC  Raphanus raphanistrum subsp. landra
FD989197       --> TATACATATGTAAAATATTGTTTTCTGATAATGGTCATAAACCACTCTTC  Raphanus raphanistrum subsp. landra
FD989204       --> TATACATATGTAAAATATTGTTTTCTGATAATGGTCATAAACCACTCTTC  Raphanus raphanistrum subsp. landra
EV570220       --> TATACATATGCAAAATATTGTTTTCTGATAATGGTCATAAACCACTCTTC  Raphanus raphanistrum subsp. landra
EX762493       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD571893       --> TATAAATATGTATAATATTGTTTTCTGATAATGGTCATAAACCACTCTTC  Raphanus sativus cv Early Scarlet Globe
FY438770       --> TATAAATATGTATAATATTGTTTTCTGATAATGGTCATAAACCACTCTTC  Raphanus sativus cv GSK3-1
EX757863       --> TATACATATGTAAAATATTGTTTTCTGATAATGGTCATAAACCACTCTTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD558952       --> TATACATATGTAAAATATTGTTTTCTGATAATGGTCATAAACCACTCTTC  Raphanus raphanistrum subsp. landra
FY434463       --> TATAAATATGTATAATATTGTTTTCTGATAATGGTCATAAACCACTCTTC  Raphanus sativus cv GSK3-1
EW716627       --> TATAAATATGTATAATATTGTTTTCTGATAATGGTCATAAACCACTCTTC  Raphanus sativus var. oleiformis

               701    -    751
UN13897        --> GTTTATATAATACTATATGTTATCTGTTTTGTGTTCTGTATCATGGAATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD943034       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY904569       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV530116       <-- ATTTATATAATACTATATGTTATCTGTTTTGTGTTCTGTATCATGGAATG  Raphanus raphanistrum subsp. maritimus
EV531139       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV532957       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX767881       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX901603       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY925679       <-- ..................................................  Raphanus sativus var. oleiformis
FD983095       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD985018       <-- ATTTATATAATACTATATGTTATCTGTTTTGTGTTCTGc...........  Raphanus raphanistrum subsp. landra
FD575645       <-- GTTTATAc..........................................  Raphanus sativus cv Early Scarlet Globe
FD554743       <-- ATTTATAc..........................................  Raphanus raphanistrum subsp. landra
EV574572       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY935207       <-- GTTTATATAATACTATATGTTATCTGTTTTGTGTTCTGTATCATGGAATG  Raphanus sativus cv Early Scarlet Globe
EW720723       <-- GTTTATATAATACTATATGTTATCTGTTTTGTGTTCTGTATCATGGAATG  Raphanus sativus var. oleiformis
FD567223       <-- GTTTATATAATACTATATGTTATCTc........................  Raphanus sativus var. oleiformis
FD971557       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY908960       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD947021       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD562475       --> ..................................................  Raphanus sativus var. oleiformis
EX770841       --> ..................................................  Raphanus raphanistrum subsp. landra
EX747177       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV525339       --> ATTTATATAATACTATATGTTATCTGTTTTGTGTTCTGTATCATGGAATG  Raphanus raphanistrum subsp. maritimus
EV526730       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV529139       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV536359       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX763846       --> att...............................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX897940       --> ATTTATATAATACTATATGTTATCTGTTTTaaaaaaaa............  Raphanus sativus cv Early Scarlet Globe
EY929182       --> ATTTATATAATACTATATGTTATCTGTTcaaa..................  Raphanus sativus var. oleiformis
EY939229       --> GTTTATATAATACTATATGTTATCTGTTTTGTGTTCTGTATCATGGAATG  Raphanus sativus cv Early Scarlet Globe
FD543649       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD946591       --> GTTTATATAATACTATATGTTATCTGTTTTGTG.................  Raphanus sativus cv Early Scarlet Globe
FD986945       --> attcaaaaaaaaa.....................................  Raphanus raphanistrum subsp. landra
FD989197       --> ATTTATATAATACTATATGTTATCTGaaaaaaaa................  Raphanus raphanistrum subsp. landra
FD989204       --> ATTTATATAATACTATATGTTATCTGTTTTGTGTTCTG............  Raphanus raphanistrum subsp. landra
EV570220       --> ATTTATATAATACTATATGTTATCTGTTTTa...................  Raphanus raphanistrum subsp. landra
EX762493       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD571893       --> GTTTATAc..........................................  Raphanus sativus cv Early Scarlet Globe
FY438770       --> GTTTATATAATACTATATGTTATCTGTTT.....................  Raphanus sativus cv GSK3-1
EX757863       --> att...............................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD558952       --> ATTTATAc..........................................  Raphanus raphanistrum subsp. landra
FY434463       --> GTTTATATAATACTATATGTTATCTGTTT.....................  Raphanus sativus cv GSK3-1
EW716627       --> GTTTATATAATACTATATGTTATCTGTTTTGTGTTCTGTATCATGGAATG  Raphanus sativus var. oleiformis

               751    -    801
UN13897        --> AGCATGTTAGGAGTAATCGTCTCCTTCAGACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD943034       <-- ................................
EY904569       <-- ................................
EV530116       <-- AGCATGTTAGGAGCAATCGTCTCCTTCAGACT
EV531139       <-- ................................
EV532957       <-- ................................
EX767881       <-- ................................
EX901603       <-- ................................
EY925679       <-- ................................
FD983095       <-- ................................
FD985018       <-- ................................
FD575645       <-- ................................
FD554743       <-- ................................
EV574572       <-- ................................
EY935207       <-- AGCATGTTAGGAGTAATCGTCTCCTTCAGAtt
EW720723       <-- AGCATGTTgagtaa..................
FD567223       <-- ................................
FD971557       --> ................................
EY908960       --> ................................
FD947021       --> ................................
FD562475       --> ................................
EX770841       --> ................................
EX747177       --> ................................
EV525339       --> AGCATGTTAGGAGCAATCGTCTCCTTCAGACT
EV526730       --> ................................
EV529139       --> ................................
EV536359       --> ................................
EX763846       --> ................................
EX897940       --> ................................
EY929182       --> ................................
EY939229       --> AGCATGTTAG-AGTAATCGTCTCCTTCAGAtt
FD543649       --> ................................
FD946591       --> ................................
FD986945       --> ................................
FD989197       --> ................................
FD989204       --> ................................
EV570220       --> ................................
EX762493       --> ................................
FD571893       --> ................................
FY438770       --> ................................
EX757863       --> ................................
FD558952       --> ................................
FY434463       --> ................................
EW716627       --> AGCATGTT--GAGTAATCGTCTCCTTC.....