1      -     51
UN13910        --> AATTCTTGAATTAACATTGACTATTGATTTATGAAGCTACAAAATCTCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY949117       <-- ..................................................
FD563833       <-- ..................................................
FD549476       <-- ..................................................
EY919287       --> AATTCTTGAATTAACATTGAGTATTGATTTATGAAGCTACAAAATCTCAT
FD545534       --> .....cTGAATTAACATTGACTATTGATTTATGAAGCTACAAAATCTCAT
FD546121       --> ....gcTGAATTAACATTGACTATTGATTTATGAAGCTACAAAATCTCAT
FD567470       --> ..................................................

               51     -    101
UN13910        --> ATATTCTATAAGAAAGAAGACGCAACAATCTGAGCTCTTTATAAAATTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY949117       <-- ................AAGACGCAACAATCTGAGCTCTTTATAAAATTTT  Raphanus sativus cv Rat-Tail Radish #3870
FD563833       <-- ................AAGACGCAACAATCTGAGCTCTTTATAAAATTTT  Raphanus sativus var. oleiformis
FD549476       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY919287       --> --GTTCTATAAGAAAGAAAACGCAACAATCTGAACTCTTTATAAAATT--  Raphanus raphanistrum subsp. landra
FD545534       --> ATATTCTATAAGAAAGAAGACGCAACAATCTGAACTCTTTATAAAATT--  Raphanus raphanistrum subsp. raphanistrum (NY)
FD546121       --> ATATTCTATAAGAAAGAAGACGCAACAATCTGAACTCTTTATAAAATT--  Raphanus raphanistrum subsp. raphanistrum (NY)
FD567470       --> ................AAGACGCAACAATCTGAGCTCTTTATAAAATTTT  Raphanus sativus var. oleiformis

               101    -    151
UN13910        --> GTAGACGTAGAGACGAAACAAAAACAAAAAATAAACTTATGTCTCCGCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY949117       <-- GTAGACGTAGAGACGAAACAAAAACAAAAAATAAACTTATGTCTCCGCAG
FD563833       <-- GTAGACGTAGAGACGAAACAAAAACAAAAAATAAACTTATGTCTCCGCAG
FD549476       <-- ..................................................
EY919287       --> ATAGACGTAGAGACGAAACAAAAACAAAAAATAAACTTATGTCTCCGCAG
FD545534       --> GTAGACGTAGAGACGAAACAAAAACAAAAAATAAACTTATGTCTCCGCAG
FD546121       --> GTAGACGTAGAGACGAAACAAAAACAAAAAATAAACTTATGTCTCCGCAG
FD567470       --> GTAGACGTAGAGACGAAACAAAAACAAAAAATAAACTTATGTCTCCGCAG

               151    -    201
UN13910        --> AATACATTTTTTTCATCCATCTTAGTACAACAACAAGCAAAGACAATAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY949117       <-- AATACATTTTTTTCATCCATCTTAGTACAACGACAAGCAAAGACAATAAA
FD563833       <-- AATACATTTTTTTCATCCATCCTAGTACAACAACAAGCAAAGACAATAAA
FD549476       <-- ..................................................
EY919287       --> AATACATTTTTTTCATCCATCTTAGTACAACAACAAGCAAAGACAATAAA
FD545534       --> AATACATTTTTTTCATCCATCTTAGTACAACAACAAGCACAGACAATAAA
FD546121       --> AATACATTTTTT-CATCCATCTTAGTACAACAACAAGCAAAGACAATAAA
FD567470       --> AATACATTTTTTTCATCCATCCTAGTACAACAACAAGCAAAGACAATAAA

               201    -    251
UN13910        --> TAAAGCAAGAATCCAAATTCAAACTTGGTTTGTTTGTACCTTAACAGCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY949117       <-- TAAAGCAAGAATCCAAATTCAAACTTGGTTTGTTTGTACCTTAACAGCCT
FD563833       <-- TAAAGCAAGAATCCAAATTCAAACTTGGTTTGTTTGTACCTTAACAGCCT
FD549476       <-- ..................................................
EY919287       --> TAAAGCAAGAATCCAAATTCAAACTTGGTTTGTTTGTACCTTAACAGCCT
FD545534       --> TAAAGCAAGAATCCAAATTCAAACTTGGTTTGTTTGTACCTTAACAGCCT
FD546121       --> TAAAGCAAGAATCCAGATTCAAACTTGGTTTGTTTGTACCTTAACAGCCT
FD567470       --> TAAAGCAAGAATCCAAATTCAAACTTGGTTTGTTTGTACCTTAACAGCCT

               251    -    301
UN13910        --> TGAACGCTGGATGAAGCAATCCAAGCTCGTCTTTCATCTCAAGTGGATTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY949117       <-- TGAACGCTc.........................................
FD563833       <-- TGAACGCTGGATGAAGCAATCCAAGCTCGTCTTTCATCTCAAGTGGATTG
FD549476       <-- ..................................................
EY919287       --> TGAACGCTGGATGTAGCAATCCAAGCTCGTCTTTCATCTCAAGTGGATTG
FD545534       --> TGAACGCTGGATGAAGCAATCCAAGCTCGTCTTTCATCTCAAGTGGATTG
FD546121       --> TGAACGCTGGATGAAGCAATCCAAGCTCGTCTTTCATCTCAAGTGGATTG
FD567470       --> TGAACGCTGGATGAAGCAATCCAAGCTCGTCTTTCATCTCAAGTGGATTG

               301    -    351
UN13910        --> CTAGTCTCGTTCCTCACTCTCTTGACTTTGCGACTAGCCAAAGATTTGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY949117       <-- ..................................................
FD563833       <-- CTAGTCTCGTTCCTCACTCTCTTGACTTTGCGACTAGCCAAAGATTTGTG
FD549476       <-- ..................................................
EY919287       --> CTAGTCTCGTTCCTCACCCTCTTGACTTTACGACTAGCCAAAGATTTGTG
FD545534       --> CTAGTCTCGTTCCTCACTCTCTTGACTTTGCGACTAGCCAATGATTTGTG
FD546121       --> CTAGTCTCGTTCCTCACTCTCTTGACTTTGCGACTAGCCAATGATTTGTG
FD567470       --> CTAGTCTCGTTCCTCACTCTCTTGACTTTGCGACTAGCCAAAGATTTGTG

               351    -    401
UN13910        --> AGTGAAACCATATATTTGCAGAATCTGGTTATCCCCAAAGTTAAAGGCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY949117       <-- ..................................................
FD563833       <-- AGTGAAACCATATATTTGCAGAATCTGGTTATCCCCAAAGTTAAAGGCTC
FD549476       <-- ..................................................
EY919287       --> AGTGAAACCATATGTTTGCAGAATCTGGTTATCCCCAAAGTTAAAGGCTC
FD545534       --> AGTGAAACCATATATTTGCAGAATCTGGTTATCCCCAAAGTTAAAGGCTC
FD546121       --> AGTGAAACCATATATTTGCAGAATCTGGTTATCCCCAAAGTTAAAGGCTC
FD567470       --> AGTGAAACCATATATTTGCAGAATCTGGTTATCCCCAAAGTTAAAGGCTC

               401    -    451
UN13910        --> TGTCCATTTGCTTTAGACACCGTTCCACGGGGTAATCCCCAAACTTCCCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY949117       <-- ..................................................
FD563833       <-- TGTCCATTTGCTTTAGACACCGTTCCACGGGGTAATCCCCAAACTTCCCG
FD549476       <-- .................................................G
EY919287       --> TGTCCATTTGCTTTAGACACCGTTCCACGGGGTAATCCCCAAACTTCCCG
FD545534       --> TGTCCATTTGCTTTAGACACCGTTCCACGGGGTAATCCCCAAACTTCCCG
FD546121       --> TGTCCATTTGCTTTAGACACCGTTCCACGGGGTAGTCCCCAAACTTCCCG
FD567470       --> TGTCCATTTGCTTTAGACACCGTTCCACGGGGTAATCCCCAAACTTCCCG

               451    -    501
UN13910        --> CATGGTTTGCAACCCACAAAGTGAGTCACCAAGGGCCATCTGTGATCGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY949117       <-- ..................................................
FD563833       <-- CATGGTTTGCAACCCACAAAGTGAGTCACCAAGGGCCATCTGTGATCGCC
FD549476       <-- CATGGTT-GCAACCCACAAAGTGAGTCACCAAGGGCCATCTGTGATCGCC
EY919287       --> CATGGTTTGCAACCCACAAAGTGAGTCACCAAGGGCCATCTGTGATCGC.
FD545534       --> CATGGTTTGCAACCCACAAAGTGAGTCACCAAGGGCCATCTGTGATCGCC
FD546121       --> CATGGTTTGCAACCCACAAAGTGAGTCACCAAGGGCCATCTGTGATCGCC
FD567470       --> CATGGTTTGCAACCCACAAAGTGAGTCACCAAGGGCCATCTGTGATCGCC

               501    -    551
UN13910        --> TAGACCCGGGTGGTAGTTCTCTATCATTTCTTCGTATTTGTCGACAAGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY949117       <-- ..................................................
FD563833       <-- TAGACACGGGTGGTAGTTCTCTATCATTTCTTCGTATTTGTCGACAAGTA
FD549476       <-- TAGACCCGGGTGGTAGTTCTCTATCATT-CCGTATTTGTCGACAAGTATC
EY919287       --> ..................................................
FD545534       --> TAGACCCGGGTGGTAGTTCTCTATCATTTC--CGTATTTGTCGACAAGTA
FD546121       --> TAGACCCGGGTGGTAGTTCTCTATCATTTCTTCGTATTTGTCGACAAGTA
FD567470       --> TAGACACGGGTGGTAGTTCTCTATCATTTCTTCGTATTTGTCGACAAGTA

               551    -    601
UN13910        --> TCCCCCAGTAGCCGTGAAGATAGTATCCATTTTCTAGGAATACCTTATTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY949117       <-- ..................................................
FD563833       <-- CTCCCCAGTAGCCGTGAAGATAGTATCCATTTTCTAGGAATACCTTATTA
FD549476       <-- CCCCAGTAGCCGTGAAGATAGTATCCATTTTCTAGGAATACCTTATTACC
EY919287       --> ..................................................
FD545534       --> TCCCCCAGTAGCCGTGAAGATAGTATCCATTTTCTAGGAATACCTTATTA
FD546121       --> TCCCCCAGTAGCCGTGAAGATAGTATCCATTTTCTAGGAATACCTTATTA
FD567470       --> CTCCCCAGTAGCCGTGAAGATAGTATCCATTTTCTAGGAATACCTTATTA

               601    -    651
UN13910        --> CCCCAAGTGTCACGCTGAGTAGCCAAGAGATAAACCATAGCAGACTGATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY949117       <-- ..................................................
FD563833       <-- CCCCccccggccgtaatc................................
FD549476       <-- CCAAGTGTCACGCTGAGTAGCCAAGAGATAAACCATAGCAGACTGATCAT
EY919287       --> ..................................................
FD545534       --> CCCCAAGTGTCACGCTGAGTAGCCAAGAGATAAACCATAGCAGACTGATC
FD546121       --> CCCCAAGTGTCACGCTGAGTAGCCAAGAGATAAACCATAGCAGACTGATC
FD567470       --> CCCCccccggccgtaatc................................

               651    -    701
UN13910        --> ATCAGCTTCGAAAACAGGCCTACCCTTGAGCTCACGGGTCAAAACCTTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY949117       <-- ..................................................
FD563833       <-- ..................................................
FD549476       <-- CAGCTTCGAAAACAGGCCTACCCTTGAGCTCACGGGTCAAAACCTTACCG
EY919287       --> ..................................................
FD545534       --> ATCAGCTTCGAAAACAGGCCTACCCTTGAGCTCACGGGTCAAAACCTTAC
FD546121       --> ATCAGCTTCGAAAACAGGCCTACCCTTGAGCTCACGGGTCAAAACCTTAC
FD567470       --> ..................................................

               701    -    751
UN13910        --> CGGCTTCCTCACAGATCTTCCCTTTAGGACCCATAGGAGCCCAAGTATCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY949117       <-- ..................................................
FD563833       <-- ..................................................
FD549476       <-- GCTTCCTCACAGATCTTCCCTTTAGGACCCATAGGAGCCCAAGTATCAAG
EY919287       --> ..................................................
FD545534       --> CGGCTTCCTCACAGATCTTCCCT...........................
FD546121       --> CGGCTTCCTCACGGATCTTCCCT...........................
FD567470       --> ..................................................

               751    -    801
UN13910        --> AGCAAATCAAGCGCCCATTGATTGTTCCTAAGCAAGAAACTCCCAGTGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY949117       <-- ..................................................
FD563833       <-- ..................................................
FD549476       <-- CAAATCAAGCGCCCATTGATTGTTCCTAAGCAAGAAACTCCCAGTGTTCA
EY919287       --> ..................................................
FD545534       --> ..................................................
FD546121       --> ..................................................
FD567470       --> ..................................................

               801    -    851
UN13910        --> CAACCCAATCCAATTCTTCTCATCGTAAACCATCTCATTCCACCCGTGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY949117       <-- ..................................................
FD563833       <-- ..................................................
FD549476       <-- ACCCAATCCAATTCTTCTCATCGTAAACCATCTCATTCCACCCGTGCATC
EY919287       --> ..................................................
FD545534       --> ..................................................
FD546121       --> ..................................................
FD567470       --> ..................................................

               851    -    901
UN13910        --> TCACCAAGTTGTAATCTTTATACCTCTCCCACGGAAGCTCAAACGCCATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY949117       <-- ..................................................
FD563833       <-- ..................................................
FD549476       <-- ACCAAGTTGTAATCTTTATACCTCTCCCACGGAAGCTCAAACGCCATGTC
EY919287       --> ..................................................
FD545534       --> ..................................................
FD546121       --> ..................................................
FD567470       --> ..................................................

               901    -    951
UN13910        --> TCCGTAAACATCGCATCACTATCCATCCACCACAGAAACTCAATCTCGGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY949117       <-- ..................................................
FD563833       <-- ..................................................
FD549476       <-- CGTAAACATCGCATCACTATCCATCCACCACAGAAACTCAATCTCGGGGT
EY919287       --> ..................................................
FD545534       --> ..................................................
FD546121       --> ..................................................
FD567470       --> ..................................................

               951    -   1001
UN13910        --> GTGAGACAGCAACAGCTTCCTGATCAACGGCAACTTCGCCCAGAAACCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY949117       <-- ..................................................
FD563833       <-- ..................................................
FD549476       <-- GAGACAGCAACAGCTTCCTGATCAACGGCAACTTCGCCCAGAAACCAGCC
EY919287       --> ..................................................
FD545534       --> ..................................................
FD546121       --> ..................................................
FD567470       --> ..................................................

               1001   -   1051
UN13910        --> CCATCTCGGCATCTAGTAAAGCCATGTTGTAGAAGATCTCGATCCCGTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY949117       <-- ..................................................
FD563833       <-- ..................................................
FD549476       <-- ATCTCGGCATCTAGTAAAGCCATGTTGTAGAAGATCTCGATCCCGTGAAG
EY919287       --> ..................................................
FD545534       --> ..................................................
FD546121       --> ..................................................
FD567470       --> ..................................................

               1051   -   1101
UN13910        --> AGCCTACAGTAATCGATCTTGTTCTTGATCGACTTCAACAGTGGCGTAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY949117       <-- ..................................................
FD563833       <-- ..................................................
FD549476       <-- CCTACAGTAATCGATCTTGTTCTTGATCGACTTCAACAGTGGCGTAATGC
EY919287       --> ..................................................
FD545534       --> ..................................................
FD546121       --> ..................................................
FD567470       --> ..................................................

               1101   -   1151
UN13910        --> GCTCTCTGGATTCTCCGGCACCGGTGAGCTCCCAAACACCTCTCCATCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY949117       <-- ..................................................
FD563833       <-- ..................................................
FD549476       <-- TCTCTGGATTCTCCGGCACCGGTGAGCTCCCAAACACCTCTCCATCATCC
EY919287       --> ..................................................
FD545534       --> ..................................................
FD546121       --> ..................................................
FD567470       --> ..................................................

               1151   -   1201
UN13910        --> CCTCTCCAATCTTCTTTCTAGTTAGATCCTCCTCTCTGTTGTGATAAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY949117       <-- ..................................................
FD563833       <-- ..................................................
FD549476       <-- TCTCCAATCTTCTTTCTAGTTAGATCCTCCTCTCTGTTGTGATAAAGATC
EY919287       --> ..................................................
FD545534       --> ..................................................
FD546121       --> ..................................................
FD567470       --> ..................................................

               1201   -   1251
UN13910        --> TCTAAATCGAGGTATTTTTAAGACAAGATCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY949117       <-- ................................
FD563833       <-- ................................
FD549476       <-- TAAATCGAGGTATTTTTAAGACAAGATCTC.
EY919287       --> ................................
FD545534       --> ................................
FD546121       --> ................................
FD567470       --> ................................