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Alignment for radish unigene UN13917

               1      -     51
UN13917        --> AACAAGTCAAAGGAAACCTTTTGTTACTTGTATAACTTCTTACATAAGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY921170       <-- .......CAAAGGAAAC-TGTTGTTACTTGTATAACTTCTTACATAAGTC
FY441306       <-- ..................................................
FY449752       <-- ..................................................
FD948020       <-- ..................................................
EV539119       <-- ..................................................
FD969941       <-- ..................................................
FD978603       <-- ..................................................
EY946037       <-- ..................................................
FD561648       <-- ..................................................
EV567555       <-- ..................................................
FD563425       <-- ..................................................
FD963950       <-- ..................................................
EY940929       <-- ..................................................
FD558106       <-- ..................................................
EY932618       <-- ..................................................
EW726777       <-- ..................................................
FD941279       <-- ..................................................
FD939195       <-- ..................................................
FD568928       <-- ..................................................
FD935375       --> AACAAGTCAAAGGAAACCTTTTGTTACTTGTATAACTTCTTACATAAGTC
FY428804       --> ...AAGTCAAAGGAAACCTTTTGTTACTTGTATAACTTCTTACATAAGTC
EY928307       --> ....cGTCAAAGGAAACCTTTTGTTACTTGTATAACTTCTTACATAAGTC
EY929021       --> ....gGTCAAAGGAAACCTGTTGTTACTTGTATAACTTCTTACATAAGTC
EW729396       --> .......CAAAGGAAACCTTTTGTTACTTGTATAACTTCTTACATAAGTC
FD960103       --> .......CAAAGGAAACCTGTTGTTACTTGTATAACTTCTTACATAAGTC
EY936610       --> ..........AGGAAACCTTTTGTTACTTGTATAACTTCTTACATAAGTC
FD943866       --> ..........AGGAAACCTGTTGTTACTTGTATAACTTCTTACATAAGTC
FD573215       --> ........................TACTTGTATAACTTCTTACATAAGTC
FY432738       --> .......................gTACTTGTATAACTTCTTACATAAGTC
EV572475       --> ..................................................
FD984785       --> ..................................................

               51     -    101
UN13917        --> TTTGTGAAAAGATGTTTGAAAATCTAAAA-AAGAGCAAAAAA-GGTGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY921170       <-- TTTGTGAAAAGATGTTTGAAAATCTAAAA-A-GAGCAAAAAAAGGTGAAG
FY441306       <-- ..................................................
FY449752       <-- ..................................................
FD948020       <-- ..................................................
EV539119       <-- ..................................................
FD969941       <-- ..................................................
FD978603       <-- ..................................................
EY946037       <-- ..................................................
FD561648       <-- ..................................................
EV567555       <-- ..................................................
FD563425       <-- ..................................................
FD963950       <-- ..................................................
EY940929       <-- ..................................................
FD558106       <-- ..................................................
EY932618       <-- ..................................................
EW726777       <-- ..................................................
FD941279       <-- ..................................................
FD939195       <-- ..................................................
FD568928       <-- ..................................................
FD935375       --> TTTGTGAAAAGATGTTTGAAAATCTAAAA-AAGAGCAAAAAA-GGTGAAG
FY428804       --> TTTGTGAAAAGATGTTTGAAAATCTAAAA-AAGAGCAAAAAA-GGTGAAG
EY928307       --> TTTGTGAAAAGATGTTTGAAAATCTAAAA-AAGAGCAAAAAA-GGTGAAG
EY929021       --> TTTGTGAAAAGATGTTTGAAAATCTAAAA-A-GAGCGAAAAA-GGTGAAG
EW729396       --> TTTGTGAAAAGATGTTTGAAAATCTAAAA-AAGAGCAAAAAA-GGTGAAG
FD960103       --> TTTGTGAAAAGATGTTTGAAAATCTAAAAGAAGCAAAAAAAA-GGTGAAG
EY936610       --> TTTGTGAAAAGATGTTTGAAAATCTAAAA-AAGAGCAAAAAA-GGTGAAG
FD943866       --> TTTGTGAAAAGATGCTTGAAAATCTAAAA-A-GAGCGAAAAA-GGTGAAG
FD573215       --> TTTGTGAAAAGATGTTTGAAAATCTAAAA-A-GAGCGAAAAA-GGTGAAG
FY432738       --> TTTGTGAAAAGATGTTTGAAAATCTAAAA-AAAAGCAAAAAA-GGTGAAG
EV572475       --> ..................................................
FD984785       --> ..................................................

               101    -    151
UN13917        --> GGAATGATGATCATTGGAAACAAGAATTGTTTTCCTTCTCTTTGTTTCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY921170       <-- GGAATGATGATCGTTGGAAACAAGAATTGTTTTCCTTCTCTTTGTTTCCA
FY441306       <-- ..................................................
FY449752       <-- ..................................................
FD948020       <-- ..................................................
EV539119       <-- ..................................................
FD969941       <-- ..................................................
FD978603       <-- ..................................................
EY946037       <-- ..................................................
FD561648       <-- ..................................................
EV567555       <-- ..................................................
FD563425       <-- ..................................................
FD963950       <-- ..................................................
EY940929       <-- ..................................................
FD558106       <-- ..................................................
EY932618       <-- ..................................................
EW726777       <-- ..................................................
FD941279       <-- ..................................................
FD939195       <-- ..................................................
FD568928       <-- ..................................................
FD935375       --> GGAATGATGATCATTGGAAACAAAAATTGTTTTCCTTCTCTTTGTTTCCA
FY428804       --> GGAATGATGATCATTGGAAACAAGAATTGTTTTCCTTCTCTTTGTTTCCA
EY928307       --> GGAATGATGATCATTGGAAACAAGAATTGTTTTCCTTCTCTTTGTTTCCA
EY929021       --> GGAATGATGATCATTGGAAACAAGAATTGTTTTCCTTATCTTTGTTTCCA
EW729396       --> GGAATGATGATCATTGGAAACAAAAATTGTTT-CCTTCTCTTTGTTTCCA
FD960103       --> GGAATGATGATCATTGGAAACAAGAATTGTTTTCCTTCTCTTTGTTTCCA
EY936610       --> GGAATGATGATCATTGGAAACAAGAATTGTTTTCCTTCTCTTTGTTTCCA
FD943866       --> GGAATGATGATCATTGGAAACAAGAATTGTTTTCCTTCTCTTTGTTTCCA
FD573215       --> GGAATGATGATCATTGGAAACAAGAATTGTTTTCCTTCTCTTTGTTTCCA
FY432738       --> GGAATGATGATCATTGGAAACAAGAATTGTTTTCCTTCTCTTTGTTTCCA
EV572475       --> .....GATGATCATTGGAAACAAGAATTGTTTTCCTTCTCTTTGTTTCCA
FD984785       --> ..................................................

               151    -    201
UN13917        --> TACATATAAAATACACACACATTCATGTGTATACATATTTCTCCTCTC--
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY921170       <-- TACATATAAAACACACACACATTCATGTGTATACATATTTCTCCTCTC--
FY441306       <-- ..................................................
FY449752       <-- ..................................................
FD948020       <-- ..................................................
EV539119       <-- ..................................................
FD969941       <-- ..................................................
FD978603       <-- ..................................................
EY946037       <-- ..................................................
FD561648       <-- ..................................................
EV567555       <-- ..................................................
FD563425       <-- ..................................................
FD963950       <-- ..................................................
EY940929       <-- ..................................................
FD558106       <-- ..................................................
EY932618       <-- ..................................................
EW726777       <-- ..................................................
FD941279       <-- ..................................................
FD939195       <-- ..................................................
FD568928       <-- ..................................................
FD935375       --> TACATATAAAATACACACACATTCATGTGTATACATATTTCTCCTCTC--
FY428804       --> TACATATAAAATACACACACATTCATGTGTATACATATTTCTCCTCTC--
EY928307       --> TACATATAAAATACACACACATTCATGTGTATACATATTTCTCCTCTC--
EY929021       --> AACATATAAAATACACACACATTCATGTGTATACATATTTCTCCTCTC--
EW729396       --> TACATATAAAATACACACACATTCATGTGTATACATATTTCTCCTCTC--
FD960103       --> TACATATAAAATACACAAACATTCATGTGTATAAATATTTCTCCTCTCAC
EY936610       --> TACATATAAAATACACACACATTCATGTGTATACATATTTCTCCTCTC--
FD943866       --> AACATATAAAATACACACACATTCATGTGTATACATATTTCTCCTCTC--
FD573215       --> AACATATAAAATACACACACATTCATGTGTATACATATTTCTCCTCTC--
FY432738       --> TACATATAAAATACACACACATTCATGTGTATACATATTTCTCCTCTC--
EV572475       --> TACATATAAAA-ACACACACATTCATGTGTATAAATATTTCTCCTCTCAC
FD984785       --> ..................................................

               201    -    251
UN13917        --> GCCCTTCTTTCTCCACATTTTGCTTCATTCTGCATGGCTTTTATTAACCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY921170       <-- GCACTTCTTTCTCCACATTT-GCTTCATTCTGCATGGCTTTTGTTAACAT
FY441306       <-- ..................................................
FY449752       <-- ..................................................
FD948020       <-- ..................................................
EV539119       <-- ..................................................
FD969941       <-- ..................................................
FD978603       <-- ..................................................
EY946037       <-- ..................................................
FD561648       <-- ..................................................
EV567555       <-- ..................................................
FD563425       <-- ..................................................
FD963950       <-- ..................................................
EY940929       <-- ..................................................
FD558106       <-- ..................................................
EY932618       <-- ..................................................
EW726777       <-- ..................................................
FD941279       <-- ..................................................
FD939195       <-- ..................................................
FD568928       <-- ..................................................
FD935375       --> GCCCTTCTTTCTCCACATTTTGCTTCATTCTGCATGGCTTTTATTAACCT
FY428804       --> GCCCTTCTTTCTCCACATTTTGCTTCATTCTGCATGGCTTTTATTAACCT
EY928307       --> GCCCTTCTTTCTCCACATTTTGCTTCATTCTGCATGGCTTTTATTAACCT
EY929021       --> GCCCTTCTTTCTCCACATTTTGCTTCATTCTGCATGGCTTTTATTAACCT
EW729396       --> GCCCTTCTTTCTCCACATTTTGCTTCATTCTGCATGGCTTTTATTAACCT
FD960103       --> ACCCTTCTTTCTCCACCTTTT-CTTCATTCTGCATGGCTTTTATTAACCT
EY936610       --> GCCCTTCTCTCTCCACATTTTGCTTCATTCTGCATGGCTTTTATTAACCT
FD943866       --> GCCCTTCTTTCTCCACATTTTGCTTCATTCTGCATGGCTTTTATTAACCT
FD573215       --> GCCCTTCTTTCTCCACATTTTGCTTCATTCTGCATGGCTTTTATTAACCT
FY432738       --> GCCCTTCTTTCTCCACATTTTGCTTCATTCTGCATGGCTTTTATTAACCT
EV572475       --> ACCCTTCTTTCTCCACCTTT-GCTTCATTCTGCATGACTTTTATTAACCT
FD984785       --> ......CTTTCTCCACATTT-GCTTCATTCTGCATGGCTTTTGTTAACCT

               251    -    301
UN13917        --> CTCCCTCACTACTCTTCGATTCCTCCTCACTACTCTTTGATGATTCATCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY921170       <-- CTCCCTCACTACTCTTTGATTCCTCCTCAGCACTCTTCGCTGATTCATCA  Raphanus raphanistrum subsp. landra
FY441306       <-- ..................................................  Raphanus sativus cv GSK3-1
FY449752       <-- ..................................................  Raphanus sativus cv GSK3-1
FD948020       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV539119       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD969941       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD978603       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY946037       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD561648       <-- ..................................................  Raphanus sativus var. oleiformis
EV567555       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD563425       <-- ..................................................  Raphanus sativus var. oleiformis
FD963950       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY940929       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD558106       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY932618       <-- ..................................................  Raphanus sativus var. oleiformis
EW726777       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD941279       <-- ..................................................  Raphanus sativus var. oleiformis
FD939195       <-- ..................................................  Raphanus sativus var. oleiformis
FD568928       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD935375       --> CTCCCTCACTACTCTTCGATTCCTCCTCACTACTCTTTGATGATTCATCA  Raphanus sativus var. oleiformis
FY428804       --> CTCCCTCACTACTCTTCGATTCCTCCTCACTACTCTTTGATGATTCATCA  Raphanus sativus cv GSK3-1
EY928307       --> CTCCCTCACTACTCTTCGATTCCTCCTCACTACTCTTTGATGATTCATCA  Raphanus sativus var. oleiformis
EY929021       --> CTCCCTCACTACTCTTCGATTCCTCCTCACTACTCTTTGATGATTCATCA  Raphanus sativus var. oleiformis
EW729396       --> CTCCCTCACTACTCTTCGACTCCTCCTCACTACTCTTTGATGATTCATCA  Raphanus sativus cv Early Scarlet Globe
FD960103       --> CTCCCTCACTACTCTTCGATTCCTCCTCAGTACTCTTCGATGATTCATCA  Raphanus raphanistrum subsp. maritimus
EY936610       --> CTCCCTCACTACTCTTCGATTCCTCCTCACTACTCTTTGATGATTCATCA  Raphanus sativus cv Early Scarlet Globe
FD943866       --> CTCCCTCACTACTCTTCGATTCCTCCTCACTACTCTTTGATGATTCATCA  Raphanus sativus cv Early Scarlet Globe
FD573215       --> CTCCCTCACTACTCTTCGATTCCTCCTCACTACTCTTTGATGATTCATCA  Raphanus sativus cv Early Scarlet Globe
FY432738       --> CTCCCTCACTACTCTTCGATTCCTCCTCACTACTCTTTGATGATTCATCA  Raphanus sativus cv GSK3-1
EV572475       --> CTGCCTCACTACTCTTCGGTTCCTCTTCAGTACTCTTCGATGATTCATCA  Raphanus raphanistrum subsp. landra
FD984785       --> CTCCCTCACTACTCTTTGATTCCTCCTCAGCACTCTTCGCTGATTCATCA  Raphanus raphanistrum subsp. landra

               301    -    351
UN13917        --> AACGCCATCAACGGTTTGATGTCACCGTTCCAAATGCAGTGAGAAGCCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY921170       <-- AACGCCATCAACGGTTTGATGTCACCGTTCCAAATGCAGTGAGAAGCCAG
FY441306       <-- ..................................................
FY449752       <-- ..................................................
FD948020       <-- ..................................................
EV539119       <-- ..................................................
FD969941       <-- ..................................................
FD978603       <-- ..................................................
EY946037       <-- ..................................................
FD561648       <-- ..................................................
EV567555       <-- ..................................................
FD563425       <-- ..................................................
FD963950       <-- ..................................................
EY940929       <-- ..................................................
FD558106       <-- ..................................................
EY932618       <-- ..................................................
EW726777       <-- ..................................................
FD941279       <-- ..................................................
FD939195       <-- ..................................................
FD568928       <-- ..................................................
FD935375       --> AACGCCATCAACGGTTTGATGTCACCGTTCCAAATGCAGTGAGAAGCCAG
FY428804       --> AACGCCATCAACGGTTTGATGTCACCGTTCCAAATGCAGTGAGAAGCCAG
EY928307       --> AACGCCATCAACGGTTTGATGTCACCGTTCCAAATGCAGTGAGAAGCCAG
EY929021       --> AACGCCATCAACGGTTTGATGTCACCGTTCCAAATGCAGTGAGAAGCCAG
EW729396       --> AACGCCATCAACGGTTTGATGTCACCGTTCCAAATGCAGTGAGAAGCCAG
FD960103       --> AACGCCATCAACGGTTTGATGTCACCGTTCCAAATGCAGTGAGAAGCCAG
EY936610       --> AACGCCATCAACGGTTTGATGTCACCGTTCCAAATGCAGTGAGAAGCCAG
FD943866       --> AACGCCATCAACGGTTTGATGTCACCGTTCCAAATGCAGTGAGAAGCCAG
FD573215       --> AACGCCATCAACGGCTTGATGTCACCGTTCCAAATGCAGTGAGAAGCCAG
FY432738       --> AACGCCATCAACGGTTTGATGTCACCGTTCCAAATGCAGTGAGAAGCCAG
EV572475       --> AACGCCATCAACGGTTTGATGTCACCGTTCCAAATGCAGTGAGAAGCCAG
FD984785       --> AACGCCATCAACGGTTTGATGTCACCGTTCCAAATGCAGTGAGAAGCCAG

               351    -    401
UN13917        --> GAACCCAATGACGGCTGGGACAATGTATAACAAAGCAGGCTGTGCTGCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY921170       <-- GAACCCGATGACGGCTGGGACAATGTACAACAAAGCAGGCTGTGCTGCTT  Raphanus raphanistrum subsp. landra
FY441306       <-- ........................................TGTGCTGCTT  Raphanus sativus cv GSK3-1
FY449752       <-- ..................................................  Raphanus sativus cv GSK3-1
FD948020       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV539119       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD969941       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD978603       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY946037       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD561648       <-- ..................................................  Raphanus sativus var. oleiformis
EV567555       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD563425       <-- ..................................................  Raphanus sativus var. oleiformis
FD963950       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY940929       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD558106       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY932618       <-- ..................................................  Raphanus sativus var. oleiformis
EW726777       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD941279       <-- ..................................................  Raphanus sativus var. oleiformis
FD939195       <-- ..................................................  Raphanus sativus var. oleiformis
FD568928       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD935375       --> GAACCCAATGACGGCTGGGACAATGTATAACAAAGCAGGCTGTGCTGCTT  Raphanus sativus var. oleiformis
FY428804       --> GAACCCAATGACGGCTGGGACAATGTATAACAAAGCAGGCTGTGCTGCTT  Raphanus sativus cv GSK3-1
EY928307       --> GAACCCAATGACGGCTGGGACAATGTATAACAAAGCAGGCTGTGCTGCTT  Raphanus sativus var. oleiformis
EY929021       --> GAACCCAATGACGGCTGGGACAATGTATAACAAAGCAGGCTGTGCTGCTT  Raphanus sativus var. oleiformis
EW729396       --> GAACCCAATGACGGCTGGGACAATGTATAACAAAGCAGGCTGTGCTGCTT  Raphanus sativus cv Early Scarlet Globe
FD960103       --> GAACCCAATGACGGCTGGGACAATGTACAACAAAGAAGGCTGTGCTGCTT  Raphanus raphanistrum subsp. maritimus
EY936610       --> GAACCCAATGACGGCTGGGACAATGTATAACAAAGCAGGCTGTGCTGCTT  Raphanus sativus cv Early Scarlet Globe
FD943866       --> GAACCCAATGACGGCTGGGACAATGTATAACAAAGCAGGCTGTGCTGCTT  Raphanus sativus cv Early Scarlet Globe
FD573215       --> GAACCCAATGACGGCTGGGACAATGTATAACAAAGCAGGCTGTGCTGCTT  Raphanus sativus cv Early Scarlet Globe
FY432738       --> GAACCCAATGACGGCTGGGACAATGTATAACAAAGCAGGCTGTGCTGCTT  Raphanus sativus cv GSK3-1
EV572475       --> GAACCCGATGACGGCTGGGACAATGTACAACAAAGCAGGCTGTGCTGCTT  Raphanus raphanistrum subsp. landra
FD984785       --> GAACCCGATGACGGCTGGGACAATGTACAACAAAGCAGGCTGTGCTGCTT  Raphanus raphanistrum subsp. landra

               401    -    451
UN13917        --> GAAACCAGTTCATGACTACAATAGTGAGGACAACTCCAGCAACGTAACCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY921170       <-- GAAACCAGTTCATGACTACAATAGTGAGGACAACGCCAGCAACGTATCCC
FY441306       <-- GAAACCAGTTCATGACTACAATAGTGAGGACAACTCCAGCAACGTAACCC
FY449752       <-- ..................................................
FD948020       <-- ..................................................
EV539119       <-- ..................................................
FD969941       <-- ..................................................
FD978603       <-- ..................................................
EY946037       <-- ..................................................
FD561648       <-- ..................................................
EV567555       <-- ..................................................
FD563425       <-- ..................................................
FD963950       <-- ..................................................
EY940929       <-- ..................................................
FD558106       <-- ..................................................
EY932618       <-- ..................................................
EW726777       <-- ..................................................
FD941279       <-- ..................................................
FD939195       <-- ..................................................
FD568928       <-- ..................................................
FD935375       --> GAAACCAGTTCATGACTACAATAGTGAGGACAACTCCAGCAACGTAACCC
FY428804       --> GAAACCAGTTCATGACTACAATAGTGA.......................
EY928307       --> GAAACCAGTTCATGACTACAATAGTGAGGACAACTCCAGCAACGTAACCC
EY929021       --> GAAACCAGTTCATGACTACAATAGTGAGGACAACTCCAGCAACGTAACCC
EW729396       --> GAAACCAGTTCATGACTACAATAGTGAGGACAACTCCAGCAACGTAACCC
FD960103       --> GAAACCAGTTCATGACTACAATAGTGAGGACAACGCCAGCAACGTATCCC
EY936610       --> GAAACCAGTTCATGACTACAATAGTGAGGACAACTCCAGCAACGTAACCC
FD943866       --> GAAACCAGTTCATGACTACAATAGTGAGGACAACTCCAGCAACGTAACCC
FD573215       --> GAAACCAGTTCATGACTACAATAGTGAGGACAACTCCAGCAACGTAACCC
FY432738       --> GAAACCAGTTCATGACTACAATAGTGAGGACAACTCCAGCAACGTAACCC
EV572475       --> GAAACCAGTTCATGACTACAATAGTGAGGACAACTCCAGCAACGTAACCC
FD984785       --> GAAACCAGTTCATGACTACAATAGTGAGGACAACGCCAGCAACGTATCCC

               451    -    501
UN13917        --> ACAAACGCACTTGTGAAGTACTGTGGTTTACTGCGTCTTGACACATCGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY921170       <-- ACAAACGCACTTGTGAAGTACTGTGGTTTACTGCGTCTTGACACATCGAA
FY441306       <-- ACAAACGCACTTGTGAAGTACTGTGGTTTACTGCGTCTTGACACATCGAA
FY449752       <-- ............................TACTGCGTCTTGACACATCGAA
FD948020       <-- ..................................................
EV539119       <-- ..................................................
FD969941       <-- ..................................................
FD978603       <-- ..................................................
EY946037       <-- ..................................................
FD561648       <-- ..................................................
EV567555       <-- ..................................................
FD563425       <-- ..................................................
FD963950       <-- ..................................................
EY940929       <-- ..................................................
FD558106       <-- ..................................................
EY932618       <-- ..................................................
EW726777       <-- ..................................................
FD941279       <-- ..................................................
FD939195       <-- ..................................................
FD568928       <-- ..................................................
FD935375       --> ACAAATGCACTTGTGAAGTACTGTGGTTTACTGCGTCTTGACACATCGAA
FY428804       --> ..................................................
EY928307       --> ACAAATGCACTTGTGAAGTACTGTGGTTTACTGCGTCTTGACACATCGAA
EY929021       --> ACAAACGCACTTGTGAAGTACTGTGGTTTACTGCGTCTTGACACATCGAA
EW729396       --> ACAAACGCACTTGTGAAGTACTGTGGTTTACTGCGTCTTGACACATCGAA
FD960103       --> ACAAACGCACTTGTGAAGTATTGTGGTTTACTGCGTCTTGACACATCGAA
EY936610       --> ACAAACGCACTTGTGAAGTACTGTGGTTTACTGCGTCTTGACACATCGAA
FD943866       --> ACAAACGCGCTTGTGAAGTACTGTGGTTTACTGCGTCTTGACACATCGAA
FD573215       --> ACAAACGCACTTGTGAAGTACTGTGGTTTACTGCGTCTTGACACATCGAA
FY432738       --> ACAAAAGCACTTGTGAAGTACTGTGGTTTACTGCGTCTTGACACATCGAA
EV572475       --> ACAAATGCACTTGTGAAGTACTGTGGTTTACTGCGTCTTGACACATCGAA
FD984785       --> ACAAACGCACTTGTGAAGTACTGTGGTTTACTGCGTCTTGACACATCGAA

               501    -    551
UN13917        --> TCTTAGAGCCAACGCAACAAAAATACCCGGAATGACAATATCACCAAGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY921170       <-- TCTTAGAGCCAACGCAACAAAAATACCCGGAATGACAATATCACCAAGCC
FY441306       <-- TCTTAGAGCCAACGCAACAAAAATACCCGGAATGACAATATCACCAAGCC
FY449752       <-- TCTTAGAGCCAACGCAACAAAAATACCCGGAATGACAATATCACCAAGCC
FD948020       <-- .....GAGCCAACGCAACAAAAATACCCGGAATGACAATATCACCAAGCC
EV539119       <-- ...............................ATGACAATATCACCAAGCC
FD969941       <-- ...............................ATGACAATATCACCAAGCC
FD978603       <-- ..............................................AGCC
EY946037       <-- ..................................................
FD561648       <-- ..................................................
EV567555       <-- ..................................................
FD563425       <-- ..................................................
FD963950       <-- ..................................................
EY940929       <-- ..................................................
FD558106       <-- ..................................................
EY932618       <-- ..................................................
EW726777       <-- ..................................................
FD941279       <-- ..................................................
FD939195       <-- ..................................................
FD568928       <-- ..................................................
FD935375       --> TCTTAAAGCCAACGCAACAAAAATACCCGGAATGACAATATCACCAAGCC
FY428804       --> ..................................................
EY928307       --> TCTTAGAGACAACGCAACAAAAATACCCGGAATGACAATATCACCAAGCC
EY929021       --> TCTTAGAGCCAACGCAACAAAAATACCCGGAATGACAATATCACCAAGCC
EW729396       --> TCTTAAAGCTAACGCAACAAAAATACCCGGAATGACAATATCACCAAGCC
FD960103       --> TCTTAGAGCCAACGCAACAAAAATACCCGGAATGACAATATCACCAAGCC
EY936610       --> TCTTAGAGCCAACGCAACAAAAATACCCGGAATGACAATATCACCAAGCC
FD943866       --> TCTTAGAGCCAACGCAACAAAAATACCCGGAATGACAATATCACCAAGCC
FD573215       --> TCTTAAAGCCAACGCAACAAAAATACCCGGAATGACAATATCACCAAGCC
FY432738       --> TCTTAGAGCCAACGCAACAAAAATACCCGGAATGACAATATCACCAAGCC
EV572475       --> TCTTAGAGCCAACGCAACAAAAATACCCGGAATGACAATATCACCAAGCC
FD984785       --> TCTTAGAGCCAACGCAACAAAAATACCCGGAATGACAATATCACCAAGCC

               551    -    601
UN13917        --> CTAGCATAGAGTATGGCCTTAGAGCATCCCCCGTAGGGAACAAAAGCTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY921170       <-- CTAGCATAGAGTATGGCCTTAGAGCATCCCCCGTAGGGAACAAAAGCTTT
FY441306       <-- CTAGCATAGAGTATGGCCTTAGAGCATCCCCCGTAGGGAACAAAAGCTTT
FY449752       <-- CTAGCATAGAGTATGGCCTTAGAGCATCCCCCGTAGGGAACAAAAGCTTT
FD948020       <-- CTAGCATAGAGTATGGCCTTAGAGCATCCCCCGTAGGGAACAAAAGCTTT
EV539119       <-- CTAGCATAGAGTATGGTCTTAGAGCATCCCCCGTAGGGAACAAAAGCTTT
FD969941       <-- -TAGCATAGAGTATGGTCTTAGAGCATCCCC-GTAGGGAACAAAAGCTTT
FD978603       <-- CTAGCATAGAGTAGGGTCTCAGAGCATCACCAGTAGGGAATAAAAGCTTT
EY946037       <-- ....CATAGAGTATGGC-TTAGAGCATCCCC-GTAGGGAACAAAAGCTTT
FD561648       <-- ....CATAGAGTATGGC-TTAGAGCATCCCC-GTAGGGAACAAAAGCTTT
EV567555       <-- ....................AGAGCATCCCC-GTAGGGAACAAAAGCTTT
FD563425       <-- .................................................T
FD963950       <-- ..................................................
EY940929       <-- ..................................................
FD558106       <-- ..................................................
EY932618       <-- ..................................................
EW726777       <-- ..................................................
FD941279       <-- ..................................................
FD939195       <-- ..................................................
FD568928       <-- ..................................................
FD935375       --> CTAGCAT...........................................
FY428804       --> ..................................................
EY928307       --> CTAGCATAGAGTATGGCCTTAGAGCATCCCCCGTAGGGAACAAAAGCTTT
EY929021       --> CTAGCATAGAGTATGGCCTTAGAGCATCCCCCGTAGGGAACAAAAGCTTT
EW729396       --> CTAGCATA..........................................
FD960103       --> CTAGCATAGAGTATGGCCTTAGAGCATCCCCCGTAGGGAACAAAAGCTTT
EY936610       --> CTAGCATAGAGTATGGCCTTAGAGCATCCCCCGTAGGGAACAAAAGCTTT
FD943866       --> CTAGCATAGAGTATGGCCTTAGAGCATCCCCCGTAGGGAACAAAAGCTTT
FD573215       --> CTAGCATAGAGTATGGCCTTAGAGCATCCCCCGTAGGGAACAAAAGCTTT
FY432738       --> CTAGCATAGAGTATGGCCTTAGAGCATCCCCCGTAGGGAACAAAAGCTTT
EV572475       --> CTAGCATAGAGTATGGCCTTAGAGCATCCCCCGTAGGGAACAAAAGCTTT
FD984785       --> CTAGCATAGAGTATGGCCTTAGAGCATCCCCCGTAGGGAACAAAAGCTTT

               601    -    651
UN13917        --> ATCGGAGCATCAAAGGATTTGGCAACACTAACCATAACTGGGGTAAAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY921170       <-- ATCGGAGCATCAAAGGATTTGGCAACACTAACCATAACTGGGGTAAAGAA
FY441306       <-- ATCGGAGCATCAAAGGATTTGGCAACACTAACCATAACTGGGGTAAAGAA
FY449752       <-- ATCGGAGCATCAAAGGATTTGGCAACACTAACCATAACTGGGGTAAAGAA
FD948020       <-- ATCGGAGCATCAAAGGATTTGGCAACACTAACCATAACTGGGGTAAAGAA
EV539119       <-- ATCGGTGCATCAAATGATTTGGCAACACTAACCATAACTGGGGTGAAGAA
FD969941       <-- ATCGGTGCATCAAATGATTTGGCAACACTAACCATAACTGGGGTGAAGAA
FD978603       <-- ATCGGAGCATCAAATGATTTGGCAACACTAACCATAACTGGGGTAAAGAA
EY946037       <-- ATCGGAGCATCAAAGGATTTGGCAACACTAACCATAACTGGGGTAAAGAA
FD561648       <-- ATCGGAGCATCAAAGGATTTGGCAACACTAACCATAACTGGGGTAAAGAA
EV567555       <-- ATCGGAGCATCAAAGGATTTGGCAACACTAACCATAACTGGGGTAAAGAA
FD563425       <-- ATCGGAGCATCAAAGGATTTGGCAACACTAACCATAACTGGGGTAAAGAA
FD963950       <-- .atcGAGCATCAAAGGATT-GGCAACACTAACCATAACTGGG-T-AAGAA
EY940929       <-- .....AGCATCAAAGGATT-GGCAACACTAACCATAACTGGG-TAAAGAA
FD558106       <-- ........ATCAAAGGATT-GGC-ACACTAACCATAACTGGG-T-AAG-A
EY932618       <-- .................................................A
EW726777       <-- ..................................................
FD941279       <-- ..................................................
FD939195       <-- ..................................................
FD568928       <-- ..................................................
FD935375       --> ..................................................
FY428804       --> ..................................................
EY928307       --> ATCGGAGCATCAAAGGATTTGGCAACACTAACCATAACTGGGGTAAAGAA
EY929021       --> ATCGGAGCATCAAAGGATTTGGCAACACTAACCATAACTGGGGTAAAGAA
EW729396       --> ..................................................
FD960103       --> ATCGGAGCATCAAAGGATTTGGCAACACTAACCATAACTGGGGTAAAGAA
EY936610       --> ATCGGAGCATCAAAGGATTTGGCAACACTAACCATAACTGGGGTAAAGAA
FD943866       --> ATCGGAGCATCAAAGGATTTGGCAACACTAACCATAACTGGGGTAAAGAA
FD573215       --> ATCGGAGCATCAAAGGATTTGGCAACACTAACCATAACTGGGGTAAAGAA
FY432738       --> ATCGGAGCATCAAAGGATTTGGCAACACTAACCATAACTGGGGTAAAGAA
EV572475       --> ATCGGAGCATCAAAGGATTTGGCAACACTAACCATAACTGGGGTAAAGAA
FD984785       --> ATCGGAGCATCAAAGGATTTGGCAACACTAACCATAACTGGGGTAAAGAA

               651    -    701
UN13917        --> AACCCAGAAAATATCATAGAAAAACAGTCCTACCAAAAGGATGGCACCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY921170       <-- AACCCAGAAAATATCATAGAAAAACAGTCCTACCAAAAGGATGGCACCAG
FY441306       <-- AACCCAGAAAATATCATAGAAAAACAGTCCTACCAAAAGGATGGCACCAG
FY449752       <-- AACCCAGAAAATATCATAGAAAAACAGTCCTACCAAAAGGATGGCACCAG
FD948020       <-- AACCCAGAAAATATCATAGAAAAACAGTCCTACCAAAAGGATGGCACCAG
EV539119       <-- AACCCAGAATATATCATAGAAAAACAGTCCTACCAAAAGGATGGCACCAG
FD969941       <-- AACCCAGAATATATCATAGAAAAACAGTCCTACCAAAAGGATGGCACCAG
FD978603       <-- AACCCAGAAAATATCATAGAAAAACAGTCCTACCAAAAGGATGGCACCAG
EY946037       <-- AACCCAGAAAATATCATAGAAAAACAGTCCTACCAAAAGGATGGCACCAG
FD561648       <-- AACCCAGAAAATATCATAGAAAAACAGTCCTACCAAAAGGATGGCACCAG
EV567555       <-- AACCCAGAAAATATCATAGAAAAACAGTCCTACCAAAAGGATGGCACCAG
FD563425       <-- AACCCAGAAAATATCATAGAAAAACAGTCCTACCAAAAGGATGGCACCAG
FD963950       <-- AACCCAGAAAATATCATAGAAAAACAGTC-TACCAAAAGGATGGCACCAG
EY940929       <-- AACCCAGAAAATATCATAGAAAAACAGTCCTACCAAAAGGATGGCACCAG
FD558106       <-- AACCCAGAAAATATCATAGAAAA-CAGTCCTACCAAAAGGATGGCACCAG
EY932618       <-- AACCCAGAAAATATCATAGAAAAACAGTCCTACCAAAAGGATGGCACCAG
EW726777       <-- .......................ACAGTCCTACCAAAAGGATGGCACCAG
FD941279       <-- ......................................GGATGGCACCAG
FD939195       <-- .......................................GATGGCACCAG
FD568928       <-- ..................................................
FD935375       --> ..................................................
FY428804       --> ..................................................
EY928307       --> AACCCAGAAAATATCATAGAAAAACAGTCCTACCAAAAGGATGGCACCAG
EY929021       --> AACCCAGAAAATATCATAGAAAAACAGTCCTACCAAAAGGATGGCACCAG
EW729396       --> ..................................................
FD960103       --> AACCCAGAAAATATCATAGAAAAA..........................
EY936610       --> AACCCAGAAAATATCATAGAAAAACAGTCCTACCAAAAGGATGGCACCAG
FD943866       --> AACCCAGAAAATATCATAGAAAAACAGTCCTACCAAAAGGATGGCACCAG
FD573215       --> AACCCAGAAAATATCATAGAAAAACAGTCCTACCAAAAGGATGGCACCAG
FY432738       --> AACCCAGAAAATATCATAGAAAAACAGTCCTACCAAAAGGATGGCACCAG
EV572475       --> AACCCAGAAAATATCATAGAAAAACAGTCCTACCAAAAGGATGGCACCAG
FD984785       --> AACCCAGAAAATATCATAGAAAAACAGTCCTACCAAAAGGATGGCACCAG

               701    -    751
UN13917        --> TCTTGAATGATCCAAGAGAGAGCATCTCAATTCCCTGAATGCAGAAGGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY921170       <-- TCTTGAATGATCCAAGAGAGAGCATCTCAATTCCCTGAATGCAGAAGGAG  Raphanus raphanistrum subsp. landra
FY441306       <-- TCTTGAATGATCCAAGAGAGAGCATCTCAATCCCCTGAATGCAGAAGGAG  Raphanus sativus cv GSK3-1
FY449752       <-- TCTTGAATGATCCAAGAGAGAGCATCTCAATCCCCTGAATGCAGAAGGAG  Raphanus sativus cv GSK3-1
FD948020       <-- TCTTGAATGATCCAAGAGAGAGCATCTCAATTCCCTGAAAACAGAAGGAG  Raphanus sativus cv Early Scarlet Globe
EV539119       <-- TCTTGAATGATCCAAGAGAGAGCATCTCAATTCCCTGAATGCAGAAGGAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD969941       <-- TCTTGAATGATCCAAGAGAGAGCATCTCAATTCCCTGAATGCAGAAGGAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD978603       <-- TCTTGAATGATCCAAGAGAGAGCATCTCAATTCCCTGAATGCAGAAAGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY946037       <-- TCTTGAATGATCCAAGAGAGAGCATCTCAATTCCCTGGATACAGAAGGAG  Raphanus sativus cv Rat-Tail Radish #3870
FD561648       <-- TCTTGAATGATCCAAGAGAGAGCATCTCAATCCCCTGAATGCAGAAGGAG  Raphanus sativus var. oleiformis
EV567555       <-- TCTTGAATGATCCAAGAGAGAGCATCTCAATTCCCTGAATGCAGAAGGAG  Raphanus raphanistrum subsp. landra
FD563425       <-- TCTTGAATGATCCAAGAGAGAGCATCTCAATCCCCTGAATGCAGAAGGAG  Raphanus sativus var. oleiformis
FD963950       <-- TCTTGAATGATCCAAGAGAGAGCATCTCAATTCCCTGAATGCAGAAGGAG  Raphanus raphanistrum subsp. maritimus
EY940929       <-- TCTTGAATGATCCAAGAGAGAGCATCTCAATTCCCTGAATACAGAAGGAG  Raphanus sativus cv Early Scarlet Globe
FD558106       <-- TCTTGAATGATCCAAGAGAGAGCATCTCAATTCCCTGAATGCAGAAGGAG  Raphanus raphanistrum subsp. landra
EY932618       <-- TCT-GAATGATCCAAGAGAGAGCATCTCAATCCCCTGAATGCAGAAGGAG  Raphanus sativus var. oleiformis
EW726777       <-- TCTTGAATGATCCAAGAGAGAGCATCTCAATTCCCTGAATGCAGAAAGAA  Raphanus sativus cv Early Scarlet Globe
FD941279       <-- TCTTGAATGATCCAAGAGAGAGCATCTCAATCCCCCGAATACAGAAGGAT  Raphanus sativus var. oleiformis
FD939195       <-- TCTTGAATGATCCAAGAGAGAGCATCTCAATCCCCTGAATGCAGAAGGAG  Raphanus sativus var. oleiformis
FD568928       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD935375       --> ..................................................  Raphanus sativus var. oleiformis
FY428804       --> ..................................................  Raphanus sativus cv GSK3-1
EY928307       --> TCTTGAATGATCCAAGAGAGAGCATCTCAATCCCCTGAATGCAG......  Raphanus sativus var. oleiformis
EY929021       --> TCTTGAATGATCCAAGAGAGAGCATCTCAATTCCCTGAATaca.......  Raphanus sativus var. oleiformis
EW729396       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD960103       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY936610       --> TCTTGAATGATCCAAGAGAGAGCATCTCAATTCCCTGAATac........  Raphanus sativus cv Early Scarlet Globe
FD943866       --> TCTTGAATGATCCAAGAGAGAGCATCTCAATTCCCTGAA...........  Raphanus sativus cv Early Scarlet Globe
FD573215       --> TCTTGAATGATCCAAGAGAGAGCA..........................  Raphanus sativus cv Early Scarlet Globe
FY432738       --> TCTTGAATGATCCAAGAGAGAGCATCTCAATCCCCTGAATGCAGAAGGAG  Raphanus sativus cv GSK3-1
EV572475       --> TCTTGAATGATCCAAGAGAGAGCATCTCAATTCCCTGAATGCAGAAGGAG  Raphanus raphanistrum subsp. landra
FD984785       --> TCTTGAATGATCCAAGAGAGAGCATCTCAATTCCCTGAATGCAGAAGGAG  Raphanus raphanistrum subsp. landra

               751    -    801
UN13917        --> AGGCCAAGGATATTGTTAGCCAGCCA-ATGTTTCTTCCAAGCGTACCACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY921170       <-- AGGCCAAGGATc......................................
FY441306       <-- AGGCCAAGGATATTGTTAGCCAGCCA-ATGTTTCTTCCAAGCGTACCACG
FY449752       <-- AGGCCAAGGATATTGTTAGCCAGCCA-ATGTTTCTTCCAAGCGTACCACG
FD948020       <-- AGGCCAAGGATATTGTTAGCCAGCCA-ATGTTTCTTCCAAGCGTACCACG
EV539119       <-- AGGCCAAGGATATTGTTAGCCAGCCA-ATGTTTCTTCCAAGCGTACCACG
FD969941       <-- AGGCCAAGGATATTGTTAGCCAGCCA-ATGTTTCTTCCAAGCGTACCACG
FD978603       <-- AGGCCAAGGATATTGTTAGCCAGCCA-ATGTTTCTTCCGAGCATACCACG
EY946037       <-- AGGCCAAGGATATTGTTAGTCAGCCA-ATGTTTCTTCCAAGCGTACCACG
FD561648       <-- AGGCCAAGGGTATTGTTAGCCAGCCA-ATGTTTCTTCCAAGCGTACCACG
EV567555       <-- AGGCCAAGGATATTGTTAGCCAGCCA-ATGTTTCTTCCAAGCATACCACG
FD563425       <-- AGGCCAAGGGTATTGTTAGCCAGCCA-ATGTTTCTTCCAAGCGTACCACG
FD963950       <-- AGGCCAAGGATATTGTTAGCCAGCCA-ATGTTTCTTCCAAGCGTACCACG
EY940929       <-- AGGCCAAGGATATTGTTAGCCAGCCA-ATGTTTCTTCCAAGCGTACCACG
FD558106       <-- AGGCCAAGGATATTGTTAGCCAGCCA-ATGTTTCTTCCAAGCGTACCACG
EY932618       <-- AGGCCAAGGATATTGTTAGCCAGCCA-ATGTTTCTTCCAAGCGTACCACG
EW726777       <-- AGGCCAAGGATATTGTTAGCCAGCCA-ATGTTTCTTCCAAGCGTACCACG
FD941279       <-- AGGCCAAGGATATTGTTAGCCAGCAATATGTTTCTTCCAAGCGTACCACG
FD939195       <-- AGGCCAAGGATATTGTTAGCCAGCCA-ATGTTTCTTCCAAGCGTACCACG
FD568928       <-- ..................................................
FD935375       --> ..................................................
FY428804       --> ..................................................
EY928307       --> ..................................................
EY929021       --> ..................................................
EW729396       --> ..................................................
FD960103       --> ..................................................
EY936610       --> ..................................................
FD943866       --> ..................................................
FD573215       --> ..................................................
FY432738       --> AGGCCAAGGATATTGTTAGCCAGCCA-ATGTTTCTTCCAAGCGTACCACG
EV572475       --> AGGCCAAGGATATTGTTAGCCAGCCA-ATGTTTCTTCCAAGCATACCACG
FD984785       --> AGGCCAAGGATATTGTTAGCCAGCCA-ATGTTT.................

               801    -    851
UN13917        --> CGCAGAAGAAGGTTCCAGGGATTCCCGCAACAACTTGGGACTTTGTGAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY921170       <-- ..................................................  Raphanus raphanistrum subsp. landra
FY441306       <-- CGCAGAAGAAGGTTCCAGGGATTCCCGCAACAACTTGGGACTTTGTGAAC  Raphanus sativus cv GSK3-1
FY449752       <-- CGCAGAAGAAGGTTCCAGGGATTCCCGCAACAACTTGGGACTTTGTGAAC  Raphanus sativus cv GSK3-1
FD948020       <-- CACAGAAGAAGGTTCCAGGGATTCCCGCAACAACTTGGGACTTTGTGAAC  Raphanus sativus cv Early Scarlet Globe
EV539119       <-- CGCAGAAGAAGGTTCCAGGGATTCCCGCAACAACTTGTGACTTTGTAAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD969941       <-- CGCAGAAGAAGGTTCCAGGGATTCCCGCAACAACTTGTGACTTTGTAAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD978603       <-- CGCAGAAGAAGGTTCCAGGGATTCCCGCAACAACTTGGGACTTTGTGAAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY946037       <-- CACAGAAGAAGGTTCCAGGGATTCCCGCAACAACTTGGGACTTTGTGAAC  Raphanus sativus cv Rat-Tail Radish #3870
FD561648       <-- CGCAGAAGAAGGTTCCAGGGATTCCCGCAACAACTTGGGACTTTGTGAAC  Raphanus sativus var. oleiformis
EV567555       <-- CGCAGAAGAAGGTTCCAGGGATTCCCGCAACAACTTGGGACTTTGTGAAC  Raphanus raphanistrum subsp. landra
FD563425       <-- CGCAGAAGAAGGTTCCAGGGATTCCCGCAACAACTTGGGACTTTGTGAAC  Raphanus sativus var. oleiformis
FD963950       <-- CGCAGAAGAAGGTTCCAGGGATTCCCGCAACAACTTGTGACTTTGTGAAC  Raphanus raphanistrum subsp. maritimus
EY940929       <-- CACAGAAGAAGGTTCCAGGGATTCCCGCAACAACTTGGGACTTTGTGAAC  Raphanus sativus cv Early Scarlet Globe
FD558106       <-- CGCAGAAGAAGGTTCCAGGGATTCCCGCAACAACTTGTGACTTTGTGAAC  Raphanus raphanistrum subsp. landra
EY932618       <-- CGCAGAAGAAGGTTCCAGGGATTCCCGCAACAACTTGGGACTTTGTGAAC  Raphanus sativus var. oleiformis
EW726777       <-- CGCAAAAGAAGGTTCCAGGGATTCCCGCAACAACTTGGGACTTTGTGAAC  Raphanus sativus cv Early Scarlet Globe
FD941279       <-- CGCAGAAGAAGGTTCCAGGGATTCCCGCAATAACTTGGGACTTTGTGAAC  Raphanus sativus var. oleiformis
FD939195       <-- CGCAGAAGAAGGTTCCAGGGATTCCCGCAACAACTTGGGACTTTGTGAAC  Raphanus sativus var. oleiformis
FD568928       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD935375       --> ..................................................  Raphanus sativus var. oleiformis
FY428804       --> ..................................................  Raphanus sativus cv GSK3-1
EY928307       --> ..................................................  Raphanus sativus var. oleiformis
EY929021       --> ..................................................  Raphanus sativus var. oleiformis
EW729396       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD960103       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY936610       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD943866       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD573215       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FY432738       --> CGCA..............................................  Raphanus sativus cv GSK3-1
EV572475       --> CGCAGAAGAAGGTTCCAGGGATTCCCGCAACAACTTGGGACTTTGTGAAC  Raphanus raphanistrum subsp. landra
FD984785       --> ..................................................  Raphanus raphanistrum subsp. landra

               851    -    901
UN13917        --> TCTACCTCCAAAGATTTGAAATAAGGAAAACGCCAGACGATAAGATTGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY921170       <-- ..................................................
FY441306       <-- TCTACCTCCAAAGATTTGAAATAAGGAAAACGCCAGACGATAAGATTGTC
FY449752       <-- TCTACCTCCAAAGATTTGAAATAAGGAAAACGCCAGACGATAAGATTGTC
FD948020       <-- TCTACCTCCAAAGATTTGAAATAAGGAAAACGCCAGACGATAAGATTGTC
EV539119       <-- TCTACTTCCAATGATTTGAAATAAGGAAAACGCCAGACGATAAGATTATC
FD969941       <-- TCTACTTCCAATGATTTGAAATAAGGAAAACGCCAGACGATAAGATTATC
FD978603       <-- TCTACCTCCAAAGATTTGAAATAAGGAAAACGCCAGACTATAAGATTGTC
EY946037       <-- TCTACCTCCAAAGATTTGAAATAAGGAAAACGCCAGACGATAAGATTGTC
FD561648       <-- TCTACCTCCAAAGATTTGAAATAAGGAAAACGCCAGACGATAAGATTGTC
EV567555       <-- TCTACCTCCAAAGATTTGAAATAAGGAAAACGCCAGACGATAAGATTGTC
FD563425       <-- TCTACCTCCAAAGATTTGAAATAAGGAAAACGCCAGACGATAAGATTGTC
FD963950       <-- TCTACCTCCAAAGATTTGAAATAAGGAAAACGCCAGACGATAAGATTGTC
EY940929       <-- TCTACCTCCAAAGATTTGAAATAAGGAAAACGCCAGACGATAAGATTGTC
FD558106       <-- TCTACCTCCAAAGATTTGAAATAAGGAAAACGCCAGACGATAAGATTGTC
EY932618       <-- TCTACCTCCAAAGATTTGAAATAAGGAAAACGCCAGACGATAAGATTGTC
EW726777       <-- TCTACCTCCAAAGATTTGAAATAAGGAAAACGCCAGACGATAAGATTGTC
FD941279       <-- TCTACCTCCAAAGATTTGAAATAAGGAAAACGCCAGACGATAAGATTGTC
FD939195       <-- TCTACCTCCAAAGATTTGAAATAAGGAAAACGCCAGACGATAAGATTGTC
FD568928       <-- ..................................................
FD935375       --> ..................................................
FY428804       --> ..................................................
EY928307       --> ..................................................
EY929021       --> ..................................................
EW729396       --> ..................................................
FD960103       --> ..................................................
EY936610       --> ..................................................
FD943866       --> ..................................................
FD573215       --> ..................................................
FY432738       --> ..................................................
EV572475       --> TCTACCTCCAAAGATTTGAAA.............................
FD984785       --> ..................................................

               901    -    951
UN13917        --> ATTCCATGGTTTTGGCAGAAACCTGCTGATGGCAGGTAACAATGTCGCCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY921170       <-- ..................................................
FY441306       <-- ATTCCATGGTTTTGGCAGAAACCTGCTGATGGCAGGTAACAATGTCGCCG
FY449752       <-- ATTCCATGGTTTTGGCAGAAACCTGCTGATGGCAGGTAACAATGTCGCCG
FD948020       <-- ATTCCATGGTTTTGGCAGAAACCTGCTGATGGCAGGTAACAATGTCGCCG
EV539119       <-- ATTCCATGGTTTTGGCAGAAACCTGCTGATGGCAGGTAACAATGTCGCCG
FD969941       <-- ATTCCATGGTTTTGGCAGAAACCTGCTGATGGCAGGTAACAATGTCGCCG
FD978603       <-- ATTCCATGGTTTTGGAAGAAACCTGCTGATGGCAGGTAACAATGTCGCCG
EY946037       <-- ATTCCATGGTTTTGGCAGAAACCTGCTGATGGCAGGTAACAATGTCGCCG
FD561648       <-- ATTCCATGGTTTTGGCAGAAACCTGCTGATGGCAGGTAACAATGTCGCCG
EV567555       <-- ATTCCATGGTTTTGGCAGAAACCTGCTGATGGCAGGTAACAGTGTCGCCG
FD563425       <-- ATTCCATGGTTTTGGCAGAAACCTGCTGATGGCAGGTAACAATGTCGCCG
FD963950       <-- ATTCCATGGTTTTGGCAGAAACCTGCTGATGGCAGGTAACAAAGTCGCCG
EY940929       <-- ATTCCATGGTTTTGGCAGAAACCTGCTGATGGCAGGTAACAATGTCGCCG
FD558106       <-- ATTCCATGGTTTTGGCAGAAACCTGCTGATGGCAGGTAACAAAGTCGCCG
EY932618       <-- ATTCCATGGTTTTGGCAGAAACCTGCTGATGGCAGGTAACAATGTCGCCG
EW726777       <-- ATTCCATGGTTTTGGCAGAAACCTGCTGATGGCAGGTAACAAAGTCGCCG
FD941279       <-- ATTCCATGGTTTTGGCAGAAACCTGCTGATGGCAGGTAACAGTGTCGCCG
FD939195       <-- ATTCCATGGTTTTGGCAGAAACCTGCTGATGGCAGGTAACAATGTCGCCG
FD568928       <-- .............................TGGCAGGTAACAATGTCGCCG
FD935375       --> ..................................................
FY428804       --> ..................................................
EY928307       --> ..................................................
EY929021       --> ..................................................
EW729396       --> ..................................................
FD960103       --> ..................................................
EY936610       --> ..................................................
FD943866       --> ..................................................
FD573215       --> ..................................................
FY432738       --> ..................................................
EV572475       --> ..................................................
FD984785       --> ..................................................

               951    -   1001
UN13917        --> AAAGAGCGACGATGCCAAGAACAAAGAAGTAAGCAGTGAGCACAGCATTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY921170       <-- ..................................................
FY441306       <-- AAAGAGCGACGATGCCAAGAACAAAGAAGTAAGCAGTGAGCACAGCATTG
FY449752       <-- AAAGAGCGACGATGCCAAGAACAAAGAAGTAAGCAGTGAGCACAGCATTG
FD948020       <-- AAAGAGCGACGATGCCAAGAACAAAGAAGTAAGCAGTGAGCACAGCATTG
EV539119       <-- AAAGAGCGACGATGCCAAGAACAAAGAAGTAAGCAGTGAGCACAGCATTG
FD969941       <-- AAAGAGCGACGATGCCAAGAACAAAGAAGTAAGCAGTGAGCACAGCATTG
FD978603       <-- AAAGAGCGACGATGCCAAGAACAAAGAAGTAAGCAGTGAGCACAGCATTG
EY946037       <-- AAAGAGCGACGATGCCAAGAACAAAGAAGTAAGCAGTGAGCACAGCATTG
FD561648       <-- AAAGAGCGACGATGCCAAGAACAAAGAAGTAAGCAGTGAGCACAGCATTG
EV567555       <-- AAAGAGCGACGATGCCAGGAACAAAGAAGTAAGCAGTGAGCACAGCATTG
FD563425       <-- AAAGAGCGACGATGCCAAGAACAAAGAAGTAAGCAGTGAGCACAGCATTG
FD963950       <-- AAAGAGCAACGATGCCAAGAACAAAGAAGTAAGCAGTGAGCACAGCATTG
EY940929       <-- AAAGAGCGACGATGCCAAGAACAAAGAAGTAAGCAGTGAGCACAACATTG
FD558106       <-- AAAGAGCAACGATGCCAAGAACAAAGAAGTAAGCAGTGAGCACAGCATTG
EY932618       <-- AAAGAGCGACGATGCCAAGAACAAAGAAGTAAGCAGTGAGCACAGCATTG
EW726777       <-- AAAGAGCGACGATGCCAAGAACAAAGAAGTAAGCAGTGAGCACAGCATTG
FD941279       <-- AAAGAGCGACGATGCCAAGAACAAAGAAGTAAGCAGTGAGCACAGCATTG
FD939195       <-- AAAGAGCGACGATGCCAAGAACAAAGAAGTAAGCAGTGAGCACAGCATTG
FD568928       <-- AAAGAGCGACGATGCCAAGAACAAAGAAGTAAGCAGTGAGCACAGCATTG
FD935375       --> ..................................................
FY428804       --> ..................................................
EY928307       --> ..................................................
EY929021       --> ..................................................
EW729396       --> ..................................................
FD960103       --> ..................................................
EY936610       --> ..................................................
FD943866       --> ..................................................
FD573215       --> ..................................................
FY432738       --> ..................................................
EV572475       --> ..................................................
FD984785       --> ..................................................

               1001   -   1051
UN13917        --> ACCAAGTCCTTAGAGAGAAACTTGAACAACAAGAAAAGAGAGAGAAGCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY921170       <-- ..................................................
FY441306       <-- ACCAAGTCCTTAGAGAGAAACTTGAACAACAAGAAAAGAGAGAGAAGCAT
FY449752       <-- ACCAAGTCCTTAGAGAGAAACTTGAACAACAAGAAAAGAGAGAGAAGCAT
FD948020       <-- ACCAAGTCCTTAGAGAGAAACTTGAACAACAAGcct..............
EV539119       <-- ACCAAGTCCTTAGAGAGAAACTTGAACAACAAGAAAAGAGAGAGAAGCAT
FD969941       <-- ACCAAGTCCTTAGAGAGAAACTTGAACAACAAGAAAAGAGAGAGAAGCAC
FD978603       <-- ACCAAGTCCTTGGAGAGAAACTTGAACAACAAGAAAAGAGAGAGAAGCAT
EY946037       <-- ACCAAGTCCTTAGAGAGAAACTTGAACAACAAGAAAAGAGAGAGAAGCAT
FD561648       <-- ACCAAGTCCTTAGAGAGAAACTTGAACAACAAGAAAAGAGAGAGAAGCAT
EV567555       <-- ACCAAGTCCTTAGAGAGAAACTTGAACAACAAGAAAAGAGAGAGAAGCAT
FD563425       <-- ACCAAGTCCTTAGAGAGAAACTTGAACAACAAGAAAAGAGAGAGAAGCAT
FD963950       <-- ACCAAGTCCTTAGAGAGAAACTTGAACAACAAGAAAAGAGAGAGAAGCAT
EY940929       <-- ACCAAGTCCTTAGAGAGAAACTTGAACAACAAGAAAAGAGAGAGAAGCAT
FD558106       <-- AACAAGTCCTTAGAGAGAAACTTGAACAACAAGAAAAGAGAGAGAAGCAT
EY932618       <-- ACCAAGTCCTTAGAGAGAAACTTGAGCAACAAGAAAAGAGAGAGAAGCAT
EW726777       <-- ACCAAGTCCTTAGAGAGAAACTTGAACAACAAGAAAAGAGAGAGAAGCAT
FD941279       <-- ACCAAGTCCTTAGAGAGAAACTTGAACAACAAGAAAAGAGAGAGAAGCAT
FD939195       <-- ACCAAGTCCTTAGAGAGAAACTTGAACAAAAAGAAAAGAGAGAGAAGCAT
FD568928       <-- ACCAAGTCCTTAGAGAGAAACTTGAACAACAAGAAAAGAGAGAGAAGCAT
FD935375       --> ..................................................
FY428804       --> ..................................................
EY928307       --> ..................................................
EY929021       --> ..................................................
EW729396       --> ..................................................
FD960103       --> ..................................................
EY936610       --> ..................................................
FD943866       --> ..................................................
FD573215       --> ..................................................
FY432738       --> ..................................................
EV572475       --> ..................................................
FD984785       --> ..................................................

               1051   -   1101
UN13917        --> AGCACTCCCAACCAATGGGAAACGCATGGCATGCTCTTTCGACATCGTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY921170       <-- ..................................................
FY441306       <-- AGCACTTCCCACCAATGGGAAACGCATGGCATGCTCTTTCGACATCGTCT
FY449752       <-- AGCACTTCCCACCAATGGGAAACGCATGGCATGCTCTTTCGACATCGTCT
FD948020       <-- ..................................................
EV539119       <-- AGCACTCCCAACCAATGGGAAACGCATGGCATGCTCTTTCGACATCGTCT
FD969941       <-- AGCACTCCCAACCAATGGGAAACGCATGGCATGCTCTTTCGACATCGTCT
FD978603       <-- AGCACTCCCAACCAATGGGAAACGCATGGCATGCTCTTTCGACATCGTCT
EY946037       <-- AGCACTCCCAACCAATGGGAAACGCATGGCATGCTCTTTCGACATCGTCT
FD561648       <-- AGCACTCCCAACCAATGGGAAACGCATGGCATGCTCTTTCGACATCGTCT
EV567555       <-- AGCACTCCCAACCAATGGGAAACGCATGGCATGCTCTTTCGACATCGTCT
FD563425       <-- AGCACTCCCAACCAATGGGAAACGCATGGCATGCTCTTTCGACATCGTCT
FD963950       <-- AGCACTCCCAACCAACGGGAAACGCATGGCATGCTCTTTCGACATCGTCT
EY940929       <-- AGCACTCCCAACCAATGGGAAACGCATGGCATGCTCTTTCGACATCGTCT
FD558106       <-- AGCACTCCCAACCAACGGGAAACGCATGGCATGCTCTTTCGACATCGTCT
EY932618       <-- AGCACTCCCAACCAATGGGAAACGCATGGCATGCTCTTTCGACATCGTCT
EW726777       <-- AGCACTCCCAACCAATGGGAAACGCATGGCATGCTCTTTCGACATCGTCT
FD941279       <-- AGCACTCCCAACCAATGGGAAACGCATGGCATGCTCTTTCGACATCGTCT
FD939195       <-- AGCACTCCCAACCAATGGGAAACGCATGGCATGCTCTTTCGACATCGTCT
FD568928       <-- AGCACTCCCAACCAATGGGAAACGCATGGCATGCTCTTTCGACATCGTCT
FD935375       --> ..................................................
FY428804       --> ..................................................
EY928307       --> ..................................................
EY929021       --> ..................................................
EW729396       --> ..................................................
FD960103       --> ..................................................
EY936610       --> ..................................................
FD943866       --> ..................................................
FD573215       --> ..................................................
FY432738       --> ..................................................
EV572475       --> ..................................................
FD984785       --> ..................................................

               1101   -   1151
UN13917        --> CCGTTGGAGGAGAATCCTTCACGGAACGAAAGCAACCGACGTAAACTGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY921170       <-- ..................................................  Raphanus raphanistrum subsp. landra
FY441306       <-- CCGTTGGAGGAGAATCCTTGACGGAACGAAAGCAACCGACGTAAACTGTA  Raphanus sativus cv GSK3-1
FY449752       <-- CCGTTGGAGGAGAATCCTTGACGGAACGAAAGCAACCGACGTAAACTGTA  Raphanus sativus cv GSK3-1
FD948020       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV539119       <-- CCGTTGGAGGAGAATCCTTGACGGAACGAAAGCAACCGACGTAAACTGTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD969941       <-- CCGTTGGAGGAGAATCCTTGACGGAACGAAAGCAACCGACGTAAACTGTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD978603       <-- CCGTTGGAGGAGAATCCTTGACGGAACGAAAGCAACCGACGTAAACAGTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY946037       <-- CCGTTGGAGGAGAATCCTTCACGGAACGAAAGCAACCGACGTAAACTGTA  Raphanus sativus cv Rat-Tail Radish #3870
FD561648       <-- CCGTTGGAGGAGAATCCTTCACGGAACGAAAGCAACCGACGTAAACTGTA  Raphanus sativus var. oleiformis
EV567555       <-- CCGTTGGAGGAGAATCCTTCACGGAACGAAAGCAACCGACGTAAACTGTA  Raphanus raphanistrum subsp. landra
FD563425       <-- CCGTTGGAGGAGAATCCTTCACGGAACGAAAGCAACCGACGTAAACTGTA  Raphanus sativus var. oleiformis
FD963950       <-- CCGTTGGAGGAGAATCCTTGACGGAACGAAAGCAACCGACGTAAACTGTA  Raphanus raphanistrum subsp. maritimus
EY940929       <-- CCGTTGGAGGAGAATCCTTCACGGAACGAAAGCAACCGACGTAAACTGTA  Raphanus sativus cv Early Scarlet Globe
FD558106       <-- CCGTTGGAGGAGAATCCTTGACGGAACGAAAGCAACCGACGTAAACTGTA  Raphanus raphanistrum subsp. landra
EY932618       <-- CCGTTGGAGGAGAATCCTTCACGGAACGAAAGCAACCGACGTAAACTGTA  Raphanus sativus var. oleiformis
EW726777       <-- CCGTTGGAGGAGAATCCTTCACGGAACGAAAGCAGCCGACGTAAACTGTA  Raphanus sativus cv Early Scarlet Globe
FD941279       <-- CCGTTGGAGGAGAATCCTTGACGGAACGAAAGCAACCGACGTAAACTGTA  Raphanus sativus var. oleiformis
FD939195       <-- CCGTTGGAGGAGAATCCTTCACGGAACGAAAGCAACCGACGTAAACTGTA  Raphanus sativus var. oleiformis
FD568928       <-- CCGTTGGAGGAGAATCCTTCACGGAACGAAAGCAACCGACGTAAACTGTA  Raphanus sativus cv Early Scarlet Globe
FD935375       --> ..................................................  Raphanus sativus var. oleiformis
FY428804       --> ..................................................  Raphanus sativus cv GSK3-1
EY928307       --> ..................................................  Raphanus sativus var. oleiformis
EY929021       --> ..................................................  Raphanus sativus var. oleiformis
EW729396       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD960103       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY936610       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD943866       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD573215       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FY432738       --> ..................................................  Raphanus sativus cv GSK3-1
EV572475       --> ..................................................  Raphanus raphanistrum subsp. landra
FD984785       --> ..................................................  Raphanus raphanistrum subsp. landra

               1151   -   1201
UN13917        --> AGACATGCCGTAAGAACAACATTCAAGTTCGGGTTCACATTCACAACAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY921170       <-- ..................................................  Raphanus raphanistrum subsp. landra
FY441306       <-- AGACATGCTGTAAGAACAACATTCAAGTTCGGGTTCACATTCACAACAAG  Raphanus sativus cv GSK3-1
FY449752       <-- AGACATGCTGTAAGAACAACATTCAAGTTCGGGTTCACATTCACAACAAG  Raphanus sativus cv GSK3-1
FD948020       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV539119       <-- AGACATGCCGTAAGGACAACATTCAAGTTCGGGTTCACATTCACAACAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD969941       <-- AGACATGCCGTAAGGACAACATTCAAGTTCGGGTTCACATTCACAACAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD978603       <-- AGACATGCCGTAAGAACAACATTCAAGTTCGGGTTCACATTCACAACAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY946037       <-- AGACATGCTGTAAGAACAACATTCAAGTTCGGGTTCACATTCACAACAAG  Raphanus sativus cv Rat-Tail Radish #3870
FD561648       <-- AGACATGCCGTAAGAACAACATTCAAGTTCGGGTTCACATTCACAACAAG  Raphanus sativus var. oleiformis
EV567555       <-- AGACATGCCGTAAGAACAACATTCAAGTTCGGGTTCACATTCACAACAAG  Raphanus raphanistrum subsp. landra
FD563425       <-- AGACATGCCGTAAGAACAACATTCAAGTTCGGGTTCACATTCACAACAAG  Raphanus sativus var. oleiformis
FD963950       <-- AGACATGCCGTAAGAACAACATTCAAGTTCGGGTTCATATTCACAACAAG  Raphanus raphanistrum subsp. maritimus
EY940929       <-- AGACATGCTGTAAGAACAACATTCAAGTTCGGGTTCACATTCACAACAAG  Raphanus sativus cv Early Scarlet Globe
FD558106       <-- AGACATGCCGTAAGAACAACATTCAAGTTCGGGTTCACATTCACAACAAG  Raphanus raphanistrum subsp. landra
EY932618       <-- AGACATGCCGTAAGAACAACATTCAAGTTCGGGTTCACATTCACAACAAG  Raphanus sativus var. oleiformis
EW726777       <-- AGACATGCTGTAAGAACAACATTCAAGTTCGGGTTCACATTCACAACAAG  Raphanus sativus cv Early Scarlet Globe
FD941279       <-- AGACATGCTGTAAGAACAACATTCAAGTTCGGGTTCACATTCACAACAAG  Raphanus sativus var. oleiformis
FD939195       <-- AGACATGCCGTAAGAACAACATTCAAGTTCGGGTTCACATTCACAACAAG  Raphanus sativus var. oleiformis
FD568928       <-- AGACATGCTGTAAGAACAACATTCAAGTTCGGGTTCACATTCACAACAAG  Raphanus sativus cv Early Scarlet Globe
FD935375       --> ..................................................  Raphanus sativus var. oleiformis
FY428804       --> ..................................................  Raphanus sativus cv GSK3-1
EY928307       --> ..................................................  Raphanus sativus var. oleiformis
EY929021       --> ..................................................  Raphanus sativus var. oleiformis
EW729396       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD960103       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY936610       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD943866       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD573215       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FY432738       --> ..................................................  Raphanus sativus cv GSK3-1
EV572475       --> ..................................................  Raphanus raphanistrum subsp. landra
FD984785       --> ..................................................  Raphanus raphanistrum subsp. landra

               1201   -   1251
UN13917        --> TGGTGCCACCGTCAAACCTGCGAGAGCGAGATTGGCGATTCTCTCACAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY921170       <-- ..................................................
FY441306       <-- TGGTGCCACCGTCAAACCTGCGAGAGCGA.....................
FY449752       <-- TGGTGCC...........................................
FD948020       <-- ..................................................
EV539119       <-- TGGTGCCACCGTCAAACCTGCGGGAGCGAGATTGGCGATTCTATCACAAT
FD969941       <-- TGGTGCCACCGTCAAACCTGCGAGAGCGAGATTGGCGATTCTCTCACAAT
FD978603       <-- TGGTGCCACCGTCAATCCTGCGAGAGCGAGATTGGCGATTCTCTCACAAT
EY946037       <-- TGGTGCCACCGTCAAACCTGCGAGAGCGAGATTGGCGATTCTCTCACAAT
FD561648       <-- TGGTGCCACCGTCAATCCTGCGAGAGCGAGATTGGCGATTCTCTCACAAT
EV567555       <-- TGGTGCCACCGTCAAACCTGCGAGAGCGAGATTGGCGATTCTCTCACAAT
FD563425       <-- TGGTGCCACCGTCAATCCTGCGAGAGCGAGATTGGCGATTCTCTCACAAT
FD963950       <-- TGGTGCCACCGTCAATCCTGCGAGAGCGAGATTGGCGATTCTCTCACAAT
EY940929       <-- TGGTGCCACCGTCAAACCTGCGAGAGCGAGATTGGCGATTCTCCCACAAT
FD558106       <-- TGGTGCCACCGTCAATCCTGCGAGAGCGAGATTGGCGATTCTCTCACAAT
EY932618       <-- TGGTGCCACCGTCAATCCTGCGAGAGCGAGATTGGCGATTCTCTCACAAT
EW726777       <-- TGGTGCCACCGTCAAACCTGCGAGAGCGAGATTGGCGATTCTCTCACAAT
FD941279       <-- TGGTGCCACCGTCAAACCTGCGAGAGCGAGATTGGCGATTCTCTCACAAT
FD939195       <-- TGGTGCCACCGTCAATCCTGCGAGAGCGAGATTGGCGATTCTCTCACAAT
FD568928       <-- TGGTGCCACCGTCAAACCTGCGAGAGCGAGATTGGCGATTCTCTCACAAT
FD935375       --> ..................................................
FY428804       --> ..................................................
EY928307       --> ..................................................
EY929021       --> ..................................................
EW729396       --> ..................................................
FD960103       --> ..................................................
EY936610       --> ..................................................
FD943866       --> ..................................................
FD573215       --> ..................................................
FY432738       --> ..................................................
EV572475       --> ..................................................
FD984785       --> ..................................................

               1251   -   1301
UN13917        --> TCTTCATGATTGAAT-----CTTTGTGTCTCTGTAAAAAACTGATGAATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY921170       <-- ..................................................
FY441306       <-- ..................................................
FY449752       <-- ..................................................
FD948020       <-- ..................................................
EV539119       <-- TCTTCATGATTGAAT-----Ccttcc........................
FD969941       <-- TCTTCATGATTGAAT-----Ccttcc........................
FD978603       <-- TCTTCATGATTGAAT-----CTTTGTGTCTCTGTAAAAAA..........
EY946037       <-- TCTTCATGATTGAAT-----CTTTcc........................
FD561648       <-- TCTTCATGATTGAAT-----CTTTcc........................
EV567555       <-- TCTTCATGATTGAATTGAATCTTTGTGTCTCTGTAAAAA-CTGATGAATG
FD563425       <-- TCTTCATGATTGAAT-----CTTTcc........................
FD963950       <-- TCTTCATGATTGAAT-----CTTTGTGTCTCTGTAAAAAACTGATGAACG
EY940929       <-- TCTTCATGATTGAAT-----CTTTtc........................
FD558106       <-- TCTTCATGATTGAAT-----CTTTGTGTCTCTGAAAAAAACTGATGAACG
EY932618       <-- TCCTCATGATTGAAT-----CTTTGTGTCTCTGTAAAAAACTGATGAATG
EW726777       <-- TCTTCATGATTGAATTGAATCTTTGTGTCTCTGTAAAAA-CTGATGAATG
FD941279       <-- TCTTCATGATTGAATTGAATCTTTGTGTCTCTGTAAAAA-CTGATGAATG
FD939195       <-- TCTTCATGATTGAAT-----CTTTGTGTCTCTGTAAAAAACTGATGAATG
FD568928       <-- TCTTCATGATTGAAT-----CTTTGTGTCTCTGTAAAAAACTGATGAACG
FD935375       --> ..................................................
FY428804       --> ..................................................
EY928307       --> ..................................................
EY929021       --> ..................................................
EW729396       --> ..................................................
FD960103       --> ..................................................
EY936610       --> ..................................................
FD943866       --> ..................................................
FD573215       --> ..................................................
FY432738       --> ..................................................
EV572475       --> ..................................................
FD984785       --> ..................................................

               1301   -   1351
UN13917        --> TATAGAGAGAGAGCGATCCAGTGGGGTCAAGTGATAAAAATTTCCACCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY921170       <-- ..................................................
FY441306       <-- ..................................................
FY449752       <-- ..................................................
FD948020       <-- ..................................................
EV539119       <-- ..................................................
FD969941       <-- ..................................................
FD978603       <-- ..................................................
EY946037       <-- ..................................................
FD561648       <-- ..................................................
EV567555       <-- TATAGAGAGA--GCGATCCAGTGGGGTCcc....................
FD563425       <-- ..................................................
FD963950       <-- TATAGAGAGGGAGCGATCCAGTGGGGTCAAGTGATAAAAA..........
EY940929       <-- ..................................................
FD558106       <-- TATAGAGAGGGAGCGACCCAGTGGGGTCAAGTGATAAAAATCTCCACCAG
EY932618       <-- TATAGAGAGAGAGCGATCCAGTGGGGTCAAGTGATAAAAATTTCCACCAG
EW726777       <-- TATAGAGAGA--GCGATCCAGTGGGGTCccc...................
FD941279       <-- TATAGAGAGA--GCGATCCAGTGGGGTCcc....................
FD939195       <-- TATAGAGAGAGAGCGATCCAGTGGGGTCAAGTGATAAAAATTTCCACCAG
FD568928       <-- TATAGAGAGAGAGCGATCCAGTGGGGTCAAGTGATAAAAATTTCCACCAG
FD935375       --> ..................................................
FY428804       --> ..................................................
EY928307       --> ..................................................
EY929021       --> ..................................................
EW729396       --> ..................................................
FD960103       --> ..................................................
EY936610       --> ..................................................
FD943866       --> ..................................................
FD573215       --> ..................................................
FY432738       --> ..................................................
EV572475       --> ..................................................
FD984785       --> ..................................................

               1351   -   1401
UN13917        --> ATCTGTTAAAATACTAATTTTT-TTTTTTTCTTAGAGAAAAGGGATCCC.
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY921170       <-- ..................................................
FY441306       <-- ..................................................
FY449752       <-- ..................................................
FD948020       <-- ..................................................
EV539119       <-- ..................................................
FD969941       <-- ..................................................
FD978603       <-- ..................................................
EY946037       <-- ..................................................
FD561648       <-- ..................................................
EV567555       <-- ..................................................
FD563425       <-- ..................................................
FD963950       <-- ..................................................
EY940929       <-- ..................................................
FD558106       <-- ATCTGTTAAAATACTAATTTTT-TTTTCTTC...................
EY932618       <-- ATCTGTTAAAATACTAATTTAT-TTcacc.....................
EW726777       <-- ..................................................
FD941279       <-- ..................................................
FD939195       <-- ATCTGTTAAAATACTAATTTAT-TTATTTTTTTA-AGAAAAGGGAgatcc
FD568928       <-- ATCCGTTAAAATACTAATTTTTATTTTTTTCTTAGAGAAAAGGGATCCC.
FD935375       --> ..................................................
FY428804       --> ..................................................
EY928307       --> ..................................................
EY929021       --> ..................................................
EW729396       --> ..................................................
FD960103       --> ..................................................
EY936610       --> ..................................................
FD943866       --> ..................................................
FD573215       --> ..................................................
FY432738       --> ..................................................
EV572475       --> ..................................................
FD984785       --> ..................................................