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Alignment for radish unigene UN13919

               1      -     51
UN13919        --> GGGGGGACACAAACCCTTCTTCCCATTTCTTCGCTGCAGACA-A-AGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX758699       <-- ..................................................
EW718668       <-- ..................................................
EV542212       <-- ..................................................
FD537203       <-- ..................................................
FD539935       <-- ..................................................
FD545011       <-- ..................................................
FD969184       <-- ..................................................
EW713647       --> GGGGGGACACAAACCCTTCTTCCCATTTTTTCGCTGCAGACAGAGAGAGA
EW713648       --> GGGGGGACACAAACCCTTCTTCCCATTTTTTCGCTGCAGACAGAGAGAGA
FD548880       --> ....GGACACAAACCCTTC---CCATTTCTTCGCTGCAGACA-A-AGAGA
EX754349       --> ................tttTTCCCATTTCTTCGCTGCAGACA--------
EX755900       --> ..................tTTCCCATTTCTTCGCTGCAGACA-A-AGAGA
FD540202       --> ................tttTTCCCATTTCTTCGCTGCAGACA--------
FD540763       --> ................tttTTCCCATTTCTTCGCTGCAGACA-A-AGAGA
FD544291       --> ................tttTTCCCATTTCTTCGCTGCAGACA--------
FD973500       --> ................tttTTCCCATTTCTTCGCTGCAGACA--------
EV538129       --> .....................CCCATTTCTTCGCTGCAGACA--------

               51     -    101
UN13919        --> GAGAGATTCAAAAATGCTTCTCAAAGCTGCTTCTACGTTCTCGCTCATGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX758699       <-- .......................AAGCTGCTTCTACGT-CTCGCTCATGA
EW718668       <-- .........................................ccCTCATGA
EV542212       <-- .................................................A
FD537203       <-- ..................................................
FD539935       <-- ..................................................
FD545011       <-- ..................................................
FD969184       <-- ..................................................
EW713647       --> GAGAGATTCAAAAATGCTTCTCAAAGCTGCTTCTACTTTCTCCCTCATGA
EW713648       --> GAGAGATTCAAAAATGCTTCTCAAAGCTGCTTCTACTTTCTCCCTCATGA
FD548880       --> GAAAGATTCAAAA-TGCTTCTCAAAGCTGCTTCTACGTTCTCGCTCATGA
EX754349       --> GAGAGATTCAAAAATGCTTCTCAAAGCTGCTTCTACGTTCTCGCTCATGA
EX755900       --> GAAAGATTCAAAAATGCTTCTCAAAGCTGCTTCTACGTTCTCGCTCATGA
FD540202       --> GAGAGATTCAAAAATGCTTCTCAAAGCTGCTTCTACGTTCTCGCTCATGA
FD540763       --> GAAAGATTCAAAAATGCTTCTCAAAGCTGCTTCTACGTTCTCGCTCATGA
FD544291       --> GAGAGATTCAAAAATGCTTCTCAAAGCTGCTTCTACGTTCTCGCTCATGA
FD973500       --> GAGAGATTCAAAAATGCTTCTCAAAGCTGCTTCTACGTTCTCGCTCATGA
EV538129       --> GAGAGATTCAAAAATGCTTCTCAAAGCTGCTTCTACGTTCTCGCTCATGA

               101    -    151
UN13919        --> ACGTTCACGGGGTGAAGAAGGACATCTCTCCTCTCT--TCACCTCCGGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX758699       <-- ACGT-CACGGGGTGAAGAAGGACATCTCTCCTCTCT-CTCACCTCCGGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW718668       <-- ACGTTCACGGAGCGAAGAAGGACATCTCTCCTCTCT--TCTCCTCCGGGA  Raphanus sativus var. oleiformis
EV542212       <-- ACGTTCACGGGGTGAAGAAGGACATCTCTCCTCTCT--TCACCTCCGGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD537203       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD539935       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD545011       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD969184       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW713647       --> ACGTTCACGGAGCGAAGAAGGACATCTCTCCTCTCT--TCTCCTCCGGGA  Raphanus sativus var. oleiformis
EW713648       --> ACGTTCACGGAGCGAAGAAGGACATCTCTCCTCTCT--TCTCCTCCGGGA  Raphanus sativus var. oleiformis
FD548880       --> ACGTTCACGGTGTGAAGAAGGACATCTCTCCT-TCT--TCACCTCCGGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX754349       --> ACGTTCACGGGGTGAAGAAGGACATCTCTCCTCTCTCTTCACCTCCGGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX755900       --> ACGTTCACGGTGTGAAGAAGGACATCTCTCTTCTCT--TCACCTCCGGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD540202       --> ACGTTCACGGGGTGAAGAAGGACATCTCTCCTCTCT--TCACCTCCGGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD540763       --> ACGTTCACGGTGTGAAGAAGGACATCTCTCTTCTCT--TCACCTCCGGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD544291       --> ACGTTCACGGGGTGAAGAAGGACATCTCTCCTCTCT--TCACCTCCGGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD973500       --> ACGTTCACGGGGTGAAGAAGGACATCTCTCCTCTCT--TCACCTCCGGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV538129       --> ACGTTCACGGGGTGAAGAAGGACATCTCTCCTCTCT--TCACCTCCGGGA  Raphanus raphanistrum subsp. raphanistrum (MS)

               151    -    201
UN13919        --> AAAACCTCTCCTT-CTCTGTTCGCGCCTCAACGCAGCCACTAAGCGGCGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX758699       <-- AAAACCTCTCTTT-CTCTGTTCGCGCCTCAACGCAGCCACTAAGCGGCGT
EW718668       <-- AAAACCTCTCCTT-CTCTGTTCGCGCCTCCACGCAGCCACTAAGCGGCGT
EV542212       <-- AAAACCTCTCCTTTCTCTGTTCGCGCCTCAACGCAGCCACTAAGCGGCGT
FD537203       <-- ..................................................
FD539935       <-- ..................................................
FD545011       <-- ..................................................
FD969184       <-- ..................................................
EW713647       --> AAAACCTCTCCTT-CTCTGTTCGCGCCTCCACGCAGCCACTAAGCGGCGT
EW713648       --> AAAACCTCTCCTT-CTCTGTTCGCGCCTCCACGCAGCCACTAAGCGGCGT
FD548880       --> AAAACCTCTCCTT-CTCTGTTCGCGCCTCAACGCAGCCACTAAGCGGCGT
EX754349       --> AAAACCTCTCCTT-CTCTGTTCGCGCCTCAACGCAGCCACTAAGCGGCGT
EX755900       --> AAAACCTCTCCTT-CTCTGTTCGCGCCTCAACGCAGCCACTAAGCGGCGT
FD540202       --> AAAACCTCTCCTT-CTCTGTTCGCGCCTCAACGCAGCCACTAAGCGGCGT
FD540763       --> AAAACCTCTCCTT-CTCTGTTCGCGCCTCAACGCAGCCACTAAGCGGCGT
FD544291       --> AAAACCTCTCCTT-CTCTGTTCGCGCCTCAACGCAGCCACTAAGCGGCGT
FD973500       --> AAAACCTCTCCTT-CTCTGTTCGCGCCTCAACGCAGCCACTAAGCGGCGT
EV538129       --> AAAACCTCTCCTT-CTCTGTTCGCGCCTCAACGCAGCCACTAAGCGGCGT

               201    -    251
UN13919        --> CGTTTTCGAGCCGTTTGTGGAAGTGAAGAAGGAACTCGATCTCGTCCCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX758699       <-- CGTTTTCGAGCCGTTTGTGGAAGTGAAGAAGGAACTCGATCTCGTCCCTT
EW718668       <-- CGTTTTCGAGCCGTTCGTGGAGGTGAAGAAGGAACTCGATCTCGTCCCTT
EV542212       <-- CGTTTTCGAGCCGTTTGTGGAAGTGAAGAAGGAACTCGATCTCGTCCCTT
FD537203       <-- ..................................................
FD539935       <-- ..................................................
FD545011       <-- ..................................................
FD969184       <-- ..................................................
EW713647       --> CGTTTTCGAGCCGTTCGTGGAGGTGAAGAAGGAACTCGATCTCGTCCCTT
EW713648       --> CGTTTTCGAGCCGTTCGTGGAGGTGAAGAAGGAACTCGATCTCGTCCCTT
FD548880       --> CGTTTTCGAGCCGTTTGTGGAAGTGAAGAGGGAACTCGATCTCGTCCCTT
EX754349       --> CGTTTTCGAGCCGTTTGTGGAAGTGAAGAAGGAACTCGATCTCGTCCCTT
EX755900       --> CGTTTTCGAGCCGTTTGTGGAAGTGAAGAAGGAACTCGATCTCGTCCCTT
FD540202       --> CGTTTTTGAGCCGTTTGTGGAAGTGAAGAAGGAACTCGATCTCGTCCCTT
FD540763       --> CGTTTTCGAGCCGTTTGTGGAAGTGAAGAAGGAACTCGATCTCGTCCCTT
FD544291       --> CGTTTTCGAGCCGTTTGTGGAAGTGAAGAAGGAACTCGATCTCGTCCCTT
FD973500       --> CGTTTTCGAGCCGTTTGTGGAAGTGAAGAAGGAACTCGATCTCGTCCCTT
EV538129       --> CGTTTTCGAGCCGTTTGTGGAAGTGAAGAAGGAACTCGATCTCGTCCCTT

               251    -    301
UN13919        --> CGAGTCCGCAGATCTCGCTTGCTCGACATATGTACTCCCCTGAGTGCGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX758699       <-- CGAGTCCGCAGATCTCGCTTGCTCGACATATGTACTCCCCTGAGTGCGAA
EW718668       <-- CGAGTCCGCAGCTCTCTCTTGCTCGACATATGTACTCCCCTGAGTGCGAA
EV542212       <-- CGAGTCCGCAGATCTCGCTTGCTCGACATATGTACTCCCCTGAGTGCGAA
FD537203       <-- .GAGTCCGCAGATCTCGCTTGCTCGACATATGTACTCCCCTGAGTGCGAA
FD539935       <-- ....TCCGCAGATCTCGCTTGCTCGACATATGTACTCCCCTGAGTGCGAA
FD545011       <-- ...........................................GTGCGAA
FD969184       <-- ...........................................GTGCGTA
EW713647       --> CGAGTCCGCAGCTCTCTCTTGCTCGACATATGTACTCCCCTGAGTGCGAA
EW713648       --> CGAGTCCGCAGCTCTCTCTTGCTCGACATATGTACTCCCCTGAGTGCGAA
FD548880       --> CGAGTCCGCAGATCTCGCTTGCTCGACATATGTACTCCCCTGAGTGCGAA
EX754349       --> CGAGTCCGCAGATCTCGCTTGCTCGACATATGTACTCCCCTGAGTGCGAA
EX755900       --> CGAGTCCGCAGATCTCGCTTGCTCGACATATGTACTCCCCTGAGTGCGAA
FD540202       --> CGAGTCCGCAGATCTCGCTTGCTCGACATATGTACTCCCCTGAGTGCGAA
FD540763       --> CGAGTCCGCAGATCTCGCTTGCTCGACATATGTACTCCCCTGAGTGCGAA
FD544291       --> CGAGTCCGCAGATCTCGCTTGCTCGACATATGTACTCCCCTGAGTGCGAA
FD973500       --> CGAGTCCGCAGATCTCGCTTGCTCGACATATGTACTCCCCTGAGTGCGTA
EV538129       --> CGAGTCCGCAGATCTCGCTTGCTCGACATATGTACTCCCCTGAGTGCGAA

               301    -    351
UN13919        --> GCCGCCGTGAATGAGCAGATCAATGTTGAATACAACGTGTCTTATGTGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX758699       <-- GCCGCCGTGAATGAGCAGATCAATGTTGAATACAACGTGTCTTATGTGTA
EW718668       <-- GCCGCCGTGAACGAGCAGATCAATGTTGAGTACAACGTGTCTTATGTGTA
EV542212       <-- GCCGCCGTGAATGAGCAGATCAATGTTGAATACAACGTGTCTTATGTGTA
FD537203       <-- GCCGCCGTGAATGAGCAGATCAATGTTGAATACAACGTGTCTTATGTGTA
FD539935       <-- GCCGCCGTGAATGAGCAGATCAATGTTGAATACAACGTGTCTTATGTGTA
FD545011       <-- GCCGCCGTGAATGAGCAGATCAATGTTAAATACAACGTGTCTTATGTGTA
FD969184       <-- GCCGCCGTGAATGAGCAGATCAATGTTGAATACAACGTGTCTTATGTGTA
EW713647       --> GCCGCCGTGAACGAGCAGATCAATGTTGAGTACAACGTGTCTTATGTGTA
EW713648       --> GCCGCCGTGAACGAGCAGATCAATGTTGAGTACAACGTGTCTTATGTGTA
FD548880       --> GCCGCCGTGAATGAGCAGATCAATGTTAAATACAACGTGTCTTATGTGTA
EX754349       --> GCCGCCGTGAATGAGCAGATCAATGTTGAATACAACGTGTCTTATGTGTA
EX755900       --> GCCGCCGTGAATGAGCAGATCAATGTTGAATACAACGTGTCTTATGTGTA
FD540202       --> GCCGCCGTGAATGAGCAGATCAATGTTGAATACAACGTGTCTTATGTGTA
FD540763       --> GCCGCCGTGAATGAGCAGATCAATGTTGAATACAACGTGTCTTATGTGTA
FD544291       --> GCCGCCGTGAATGAGCAGATCAATGTTGAATACAACGTGTCTTATGTGTA
FD973500       --> GCCGCCGTGAATGAGCAGATCAATGTTGAATACAACGTGTCTTATGTGTA
EV538129       --> GCCGCCGTGAATGAGCAGATCAATGTTGAATACAACGTGTCTTATGTGTA

               351    -    401
UN13919        --> TCACGCTTTGTACGCTTACTTTGACCGTGACAACGTTGCTCTCAAAGGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX758699       <-- TCACGCTTTGTACGCTTACTTTGACCGTGACAACGTTGCTCTCAAAGGTC
EW718668       <-- TCACGCTTTGTACGCTTACTTTGACCGTGACAACGTTGCTCTCAAAGGTC
EV542212       <-- TCACGCTTTGTACGCTTACTTTGACCGTGACAACGTTGCTCTCAAAGGTC
FD537203       <-- TCACGCTTTGTACGCTTACTTTGACCGTGACAACGTTGCTCTCAAAGGTC
FD539935       <-- TCACGCTTTGTACGCTTACTTTGACCGTGACAACGTTGCTCTCAAAGGTC
FD545011       <-- TCACGCTTTGTACGCTTACTTTGACCGTGACAACGTTGCTCTCAAAGGTC
FD969184       <-- TCACGCTTTGTACGCTTACTTTGACCGTGACAACGTTGCTCTCAAAGGTC
EW713647       --> TCACGCTTTGTACGCTTACTTTGACCGTGACAACGTTGCTCTCAAAGGTC
EW713648       --> TCACGCTTTGTACGCTTACTTTGACCGTGACAACGTTGCTCTCAAAGGTC
FD548880       --> TCACGCTTTGTACGCTTACTTTGACCGTGACAACGTTGCTCTCAAAGGTC
EX754349       --> TCACGCTTTGTACGCTTACTTTGACCGTGACAACGTTGCTCTCAAAGGTC
EX755900       --> TCACGCTTTGTACGCTTACTTTGACCGTGACAACGTTGCTCTCAAAGGTC
FD540202       --> TCACGCTTTGTACGCTTACTTTGACCGTGACAACGTTGCTCTCAAAGGTC
FD540763       --> TCACGCTTTGTACGCTTACTTTGACCGTGACAACGTTGCTCTCAAAGGTC
FD544291       --> TCACGCTTTGTACGCTTACTTTGACCGTGACAACGTTGCTCTCAAAGGTC
FD973500       --> TCACGCTTTGTACGCTTACTTTGACCGTGACAACGTTGCTCTCAAAGGTC
EV538129       --> TCACGCTTTGTACGCTTACTTTGACCGTGACAACGTTGCTCTCAAAGGTC

               401    -    451
UN13919        --> TTGCCAAGTTTTTCAAGGACTCGAGTGTGGAAGAACGAGACCACGCTGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX758699       <-- TTGCCAAGTTTTTCAAGGACTCGAGTGTGGAAGAACGAGACCACGCTGAG
EW718668       <-- TTGCCAAGTTTTTCAAGGACTCGAGTGTGGAAGAACGAGACCACGCTGAG
EV542212       <-- TTGCCAAGTTTTTCAAGGACTCGAGTGTGGAAGAACGAGACCACGCTGAG
FD537203       <-- TTGCCAAGTTTTTCAAGGACTCGAGTGTGGAAGAACGAGACCACGCTGAG
FD539935       <-- TTGCCAAGTTTTTCAAGGACTCGAGTGTGGAAGAACGAGACCACGCTGAG
FD545011       <-- TTGCCAAGTTTTTCAAGGACTCGAGTGTGGAAGAACGAGACCACGCTGAG
FD969184       <-- TTGCCAAGTTTTTCAAGGACTCGAGTGTGGAAGAACGAGACCACGCTGAG
EW713647       --> TTGCCAAGTTTTTCAAGGACTCGAGTGTGGAAGAACGAGACCACGCTGAG
EW713648       --> TTGCCAAGTTTTTCAAGGACTCGAGTGTGGAAGAACGAGACCACGCTGAG
FD548880       --> TTGCCAAGTTTTTCAAGGACTCGAGTGTGGAAGAACGAGACCACGCTGAG
EX754349       --> TTGCCAAGTTTTTCAAGGACTCGAGTGTGGAAGAACGAGACCACGCTGAG
EX755900       --> TTGCCAAGTTTTTCAAGGACTCGAGTGTGGAAGAACGAGACCACGCTGAG
FD540202       --> TTGCCAAGTTTTTCAAGGACTCGAGTGTGGAAGAACGAGACCACGCTGAG
FD540763       --> TTGCCAAGTTTTTCAAGGACTCGAGTGTGGAAGAACGAGACCACGCTGAG
FD544291       --> TTGCCAAGTTTTTCAAGGACTCGAGTGTGGAAGAACGAGACCACGCTGAG
FD973500       --> TTGCCAAGTTTTTCAAGGACTCGAGTGTGGAAGAACGAGACCACGCTGAG
EV538129       --> TTGCCAAGTTTTTCAAGGACTCGAGTGTGGAAGAACGAGACCACGCTGAG

               451    -    501
UN13919        --> ATGTTGATGGAGTATCAGAACAAACGTGGTGGGAGGGTTAAGCTACAGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX758699       <-- ATGTTGATGGAGTATCAGAACAAACGTG-TGGGAGGGTTAAGCTACAGCC
EW718668       <-- ATGTTGATGGAGTATCAGAACAAACGTGGTGGGAGGGTTAAGCTACAGCC
EV542212       <-- ATGTTGATGGAGTATCAGAACAAACGTGGTGGGAGGGTTAAGCTACAGCC
FD537203       <-- ATGTTGATGGAGTATCAGAACAAACGTGGTGGGAGGGTTAAGCTACAGCC
FD539935       <-- ATGTTGATGGAGTATCAGAACAAACGTGGTGGGAGGGTTAAGCTACAGCC
FD545011       <-- ATGTTGATGGAGTATCAGAACAAACGTGGTGGGAGGGTTAAGCTACAGCC
FD969184       <-- ATGTTGATGGAGTATCAGAACAAACGTGGTGGGAGGGTTAAGCTACAGCC
EW713647       --> ATGTTGATGGAGTATCAGAACAAACGTGGTGGGAGGGTTAAGCTACAGCC
EW713648       --> ATGTTGATGGAGTATCAGAACAAACGTGGTGGGAGGGTTAAGCTACAGCC
FD548880       --> ATGTTGATGGAGTATCAGAACAAACGTGGTGGGAGGGTTAAGCTACAGCC
EX754349       --> ATGTTGATGGAGTATCAGAACAAACGTG-TGGGAGGGTTAAGCTACAGCC
EX755900       --> ATGTTGATGGAGTATCAGAACAAACGTGGTGGGAGGGTTAAGCTACAGCC
FD540202       --> ATGTTGATGGAGTATCAGAACAAACGTGGTGGGAGGGTTAAGCTACAGCC
FD540763       --> ATGTTGATGGAGTATCAGAACAAACGTGGTGGGAGGGTTAAGCTACAGCC
FD544291       --> ATGTTGATGGAGTATCAGAACAAACGTGGTGGGAGGGTTAAGCTACAGCC
FD973500       --> ATGTTGATGGAGTATCAGAACAAACGTGGTGGGAGGGTTAAGCTACAGCC
EV538129       --> ATGTTGATGGAGTATCAGAACAAACGTGGTGGGAGGGTTAAGCTACAGCC

               501    -    551
UN13919        --> TATGGTGATGCCTCAGTCTGAGTTTGACCACGCTGAGAAAGGAGATGCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX758699       <-- TATGGTGATGCCTCAGTCTGAGTTTGACCACGCTGAGAAAGGAGATGCTC
EW718668       <-- TATGGTGATGCCTCAGTCTGAGTTTGACCACGCTGAGAAAGGAGATGCTC
EV542212       <-- TATGGTGATGCCTCAGTCTGAGTTTGACCACGCTGAGAAAGGAGATGCTC
FD537203       <-- TATGGTGATGCCTCAGTCTGAGTTTGACCACGCTGAGAAAGGAGATGCTC
FD539935       <-- TATGGTGATGCCTCAGTCTGAGTTTGACCACGCTGAGAAAGGAGATGCTC
FD545011       <-- TATGGTGATGCCTCAGTCTGAGTTTGACCACGCTGAGAAAGGAGATGCTC
FD969184       <-- TATGGTGATGCCTCAGTCTGAGTTTGACCACGCTGAGAAAGGAGATGCTC
EW713647       --> TATGGTGATGCCTCAGTCTGAGTTTGACCACGCTGAGAAAGGAGATGCTC
EW713648       --> TATGGTGATGCCTCAGTCTGAGTTTGACCACGCTGAGAAAGGAGATGCTC
FD548880       --> TATGGTGATGCCTCAGTCTGAGTTTGACCACGCTGAGAAAGGAGATGCTC
EX754349       --> TATGGTGATGCCTCAGTCTGAGTTTGACCACGCTGAGAAAGGAGATGCTC
EX755900       --> TATGGTGATGCCTCAGTCTGAGTTTGACCACGCTGAGAAAGGAGATGCTC
FD540202       --> TATGGTGATGCCTCAGTCTGAGTTTGACCACGCTGAGAAAGGAGATGCTC
FD540763       --> TATGGTGATGCCTCAGTCTGAGTTTGACCACGCTGAGAAAGGAGATGCTC
FD544291       --> TATGGTGATGCCTCAGTCTGAGTTTGACCACGCTGAGAAAGGAGATGCTC
FD973500       --> TATGGTGATGCCTCAGTCTGAGTTTGACCACGCTGAGAAAGGAGATGCTC
EV538129       --> TATGGTGATGCCTCAGTCTGAGTTTGACCACGCTGAGAAAGGAGATGCTC

               551    -    601
UN13919        --> TCTATGCCATGGAGTTGGCTCTATCATTGGAAAAACTGGTCAATGAAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX758699       <-- TCTATGCCATGGAGTTGGCTCTATCATTGGAAAAACTGGTCAATGAAAAA
EW718668       <-- TCTATGCCATGGAGTTGGCTCTATCATTGGAGAAACTGGTCAATGAAAAA
EV542212       <-- TCTATGCCATGGAGTTGGCTCTATCATTGGAAAAACTGGTCAATGAAAAA
FD537203       <-- TCTATGCCATGGAGTTGGCTCTATCATTGGAAAAACTGGTCAATGAAAAA
FD539935       <-- TCTATGCCATGGAGTTGGCTCTATCATTGGAAAAACTGGTCAATGAAAAA
FD545011       <-- TCTATGCCATGGAGTTGGCTCTATCATTGGAAAAACTGGTCAATGAAAAA
FD969184       <-- TCTATGCCATGGAGTTGGCTCTATCATTGGAAAAACTGGTCAATGAAAAA
EW713647       --> TCTATGCCATGGAGTTGGCTCTATCATTGGAGAAACTGGTCAATGAAAAA
EW713648       --> TCTATGCCATGGAGTTGGCTCTATCATTGGAGAAACTGGTCAATGAAAAA
FD548880       --> TCTATGCCATGGAGTTGGCTCTATCATTGGAAAAACTGGTCAATGAAAAA
EX754349       --> TCTATGCCATGGAGTTGGCTCTATCATTGGAAAA-CTGGTCAATGAAAA-
EX755900       --> TCTATGCCATGGAGTTGGCTCTATCATTGGAAAAACTGGTCAATGAAAA-
FD540202       --> TCTATGCCATGGAGTTGGCTCTATCATTGGAAAAACTGGTCAATGAAAAA
FD540763       --> TCTATGCCATGGAGTTGGCTCTATCATTGGAAAAACTGGTCAATGAAAAA
FD544291       --> TCTATGCCATGGAGTTGGCTCTATCATTGGAAAAACTGGTCAATGAAAAA
FD973500       --> TCTATGCCATGGAGTTGGCTCTATCATTGGAAAAACTGGTCAATGAAAAA
EV538129       --> TCTATGCCATGGAGTTGGCTCTATCATTGGAAAAACTGGTCAATGAAAAA

               601    -    651
UN13919        --> CTCCTAAACCTGCACAGTGTGGCTTCCAAGAACGATGATGTCCAGTTGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX758699       <-- CTCCTAAACCTGCACAGTGTGGCTTCCAAGAACGATGATGTCCAGTTGGC
EW718668       <-- CTCCTAAACCTGCACAGTGTGGCTTCCAAGAACGATGATGTCCAGTTGGC
EV542212       <-- CTCCTAAACCTGCACAGTGTGGCTTCCAAGAACGATGATGTCCAGTTGGC
FD537203       <-- CTCCTAAACCTGCACAGTGTGGCTTCCAAGAACGATGATGTCCAGTTGGC
FD539935       <-- CTCCTAAACCTGCACAGTGTGGCTTCCAAGAACGATGATGTCCAGTTGGC
FD545011       <-- CTCCTAAACCTGCACAGTGTGGCTTCCAAGAACGATGATGTCCAGTTGGC
FD969184       <-- CTCCTAAACCTGCACAGTGTGGCTTCCAAGAACGATGATGTCCAGTTGGC
EW713647       --> CTCCTAAACCTGCACAGTGTGGCTTCCAAGAACGATGATGTCCAGTTGGC
EW713648       --> CTCCTAAACCTGCACAGTGTGGCTTCCAAGAACGATGATGTCCAGTTGGC
FD548880       --> CTCCTAAACCTGCACAGTGTGGCTTCCAAGAACGATGATGTCCAGTTGGC
EX754349       --> CTCCTAAACCTGCACAGTGTGGCTTCCAAGAACGATGATGTCCAGTTGGC
EX755900       --> CTCCTAAACCTGCACAGTGTGGCTTCCAAGAACGATGATGTCCAGTTGGC
FD540202       --> CTCCTAAACCTGCACAGTGTGGCTTCCAAGAACGATGATGTCCAGTTGGC
FD540763       --> CTCCTAAACCTGCACAGTGTGGCTTCCAAGAACGATGATGTCCAGTTGGC
FD544291       --> CTCCTAAACCTGCACAGTGTGGCTTCCAAGAACGATGATGTCCAGTTGGC
FD973500       --> CTCCTAAACCTGCACAGTGTGGCTTCCAAGAACGATGATGTCCAGTTGGC
EV538129       --> CTCCTAAACCTGCACAGTGTGGCTTCCAAGAACGATGATGTCCAGTTGGC

               651    -    701
UN13919        --> TGATTTCATTGAGAGCGAGTTTTTGAACGAACAGGTTGAAGCAATTAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX758699       <-- TGATTTCATTGAGAGCGAGTTTTTGAACGAACAGGTTGAAGCAATTAAGA
EW718668       <-- TGATTTCATTGAGAGCGTGTTTTTGAACGAACAGGTTGAAGCAATTAAGA
EV542212       <-- TGATTTCATTGAGAGCGAGTTTTTG----AACAGGTTGAAGCAATTAAGA
FD537203       <-- TGATTTCATTGAGAGCGAGTTTTTGAACGAACAGGTTGAAGCAATTAAGA
FD539935       <-- TGATTTCATTGAGAGCGAGTTTTTGAACGAACAGGTTGAAGCAATTAAGA
FD545011       <-- TGATTTCATTGAGAGCGAGTTTTTGAACGAACAGGTTGAAGCAATTAAGA
FD969184       <-- TGATTTCATTGAGAGCGAGTTTTTGAACGAACAGGTTGAAGCAATTAAGA
EW713647       --> TGATTTCATTGAGAGCGTGTTTTTGAACGAACAGGTTGAAGCAATTAAGA
EW713648       --> TGATTTCATTGAGAGCGTGTTTTTGAACGAACAGGTTGAAGCAATTAAGA
FD548880       --> TGATTTCATTGAGAGCGAGTTTTga.........................
EX754349       --> TGATTTCATTGAGAGCGAGTTTT-G-ACG-ACA-GTTGAAGCAATTA-G-
EX755900       --> TGATTTCATTGAGAGCGAGTTTT-G-ACGAACAG-TTGAAGCAATTAAGA
FD540202       --> TGATTTCATTGAGAGCGAGTTTT-GAACGAACAG-TTGAAGCAATTAAGA
FD540763       --> TGATTTCATTGAGAGCGAGTTTTTGAACGAACAG-TTGAAGCAATTAAGA
FD544291       --> TGATTTCATTGAGAGCGAGTTTTTGAACGAACAGGTTGAAGCAATTAAGA
FD973500       --> TGATTTCATTGAGAGCGAGTTTTTGAACGAACAG-TTGAAGCAATTAAGA
EV538129       --> TGATTTCATTGAGAGCGAGTTTTTGAAC----AGGTTGAAGCAATTAAGA

               701    -    751
UN13919        --> AAATCTCTGAATATGTCTCTCAGCTCAGAAGACTCGGCAAAGGACATGGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX758699       <-- AAATCTCTGAATATGTCTCTCAGCTCAGAAGACTCGGCAAAGGACATGGG
EW718668       <-- AAATCTCGGAATACGTCTCTCAACTCAGAAGACTCGGCAAAGGACATGGG
EV542212       <-- AAATCTCTGAATATGTCTCTCAGCTCAGAAGACTCGGCAAAGGACATGGG
FD537203       <-- AAATCGCTGAATATGTCTCTCAGCTCAGAAGACTCGGCAAAGGACATGGG
FD539935       <-- AAATCTCTGAATATGTCTCTCAGCTCAGAAGACTCGGCAAAGGACATGGG
FD545011       <-- AAATCTCTGAATATGTCTCTCAGCCCAGAAGACTCGGCAAAGGACATGGG
FD969184       <-- AAATCTCTGAATATGTCTCTCAGCTCAGAAGACTCGGCAAAGGACATGGG
EW713647       --> AAATCTCGGAATACGTCTCTCAACTCAGAAGACTCGGCAAAGGACATGGG
EW713648       --> AAATCTCGGAATACGTCTCTCAACTCAGAAGACTCGGCAAAGGACATGGG
FD548880       --> ..................................................
EX754349       --> AAATCTCTGA-TATGTCTCTCAGCTCA.......................
EX755900       --> AA-TCTCTGA-TATGTCTCTCAGCTCAGA-GACTCGGCAAAG-ACATGGG
FD540202       --> AA-TCTCTGA-TATGTCTCTCAGCTCAGA-GACTCGGCAAAG-ACATGGG
FD540763       --> AAATCGCTGA-TATGTCTCTCAGCTCAGA-GACTCGGCAAAG-ACATGGG
FD544291       --> AAATCTCTGAATATGTCTCTCAGCTCAGAAGACTCGGCAAAGGACATGGG
FD973500       --> AAATCTCTGA-TATGTCTCTCAGCTCAGA-GACTCGGCAAAG-ACATGGG
EV538129       --> AAATCTCTGAATATGTCTCTCAGCTCAGAAGACTCGGCAAAGGACATGGG

               751    -    801
UN13919        --> ACATGGCATTTCGATCAGGAGCTTCTCTAATAAACTGCTGCTGCTTAAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX758699       <-- ACATGGCATTTCGATCAGGAGCTTCTCTAATAAACTGCTGCTGCTTAAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EW718668       <-- ACATGGCATTTCGATCAGAAGCTTCTCTAATAAACTGCTGCTGCTTAAGC  Raphanus sativus var. oleiformis
EV542212       <-- ACATGGCATTTCGATCAGGAGCTTCTCTAATAAACTGCTGCTGCTTAAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD537203       <-- ACATGGCATTTCGATCAGGAGCTTCTCTAATAAACTGCTGCTGCTTAAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD539935       <-- ACATGGCATTTCGATCAGGAGCTTCTCTAATAAACTGCCGCTGCTTAAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD545011       <-- ACATGGCATTTCGATCAGGAGCTTCTCTAATAAACTGCTGCTGCTTAAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD969184       <-- ACATGGCATTTCGATCAGGAGCTTCTCTAATAAACTGCTGCTGCTTAAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EW713647       --> ACATGGCATTTCGATCAGAAGCTTCTCTAATAAACTGCTGCTGCTTAA..  Raphanus sativus var. oleiformis
EW713648       --> ACATGGCATTTCGATCAGAAGCTTCTCTAATAAACTGCTGCTGCTTAAGC  Raphanus sativus var. oleiformis
FD548880       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX754349       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX755900       --> ACA...............................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD540202       --> ACATGGCATTTCGATCAG-AGC-TCTCTA-T-AACTGCTGCTGCT-AAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD540763       --> ACATGGCATTTCGATCAG-AGC-TCTCTAATAA-CTGCTGCTGCT-AAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD544291       --> ACATGGCATTTCGA....................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD973500       --> ACATGGCATTTCGATCAG-AGC-TCTCTA-T-AACTGCTGCTGCT-AAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV538129       --> ACATGGCATTTCGATCAG-AGCTTCTCTAATAAACTGCTG..........  Raphanus raphanistrum subsp. raphanistrum (MS)

               801    -    851
UN13919        --> TATTTTTGGTTGTA-TCTCTAATAAACTGCTGCTGCTGCTTAATCTATGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX758699       <-- TATTTTTGGTTGTA-TCTCTAATAAACTGCTGCTGCTTCTTAATCTATGG
EW718668       <-- TATTTTTGGTTGTAATCTCTAATAAACTGCTGCTG---CTTAATCTATGG
EV542212       <-- TATTTTTGGTTGTA-TCTCTAATAAACTGCTGCTGCTGCTTAATCTATGG
FD537203       <-- TATTTTTGGTTGTA-TCTCTAATAAACTGCTGCTG---CTTAATCTATGG
FD539935       <-- TATTTTTGGTTGTA-TCTCTAATAAACTGCTGCTGCTGCTTAATCTATGG
FD545011       <-- TATTTTTGGTTGTA-TCTCTAATAAACTGCTGCTGCTGCTTAATCTATGG
FD969184       <-- TATTTTTGGTTGTA-TCTCTAATAAACTGCTGCTGCTGCTTAATCTATGG
EW713647       --> ..................................................
EW713648       --> TATTTTTGGTTGTAATCTCTAATAAACTGCTGCTGCTtaatctat.....
FD548880       --> ..................................................
EX754349       --> ..................................................
EX755900       --> ..................................................
FD540202       --> TATTTT-GG-TGTA-TCTCTAtaa..........................
FD540763       --> TATTTTTGGT-GTA-TCTCTAATAA-CTGCTGCTGCTtatcta.......
FD544291       --> ..................................................
FD973500       --> TATTTTTGGT-GTA-TCTCTA-T-AACTGCTGCTGC..............
EV538129       --> ..................................................

               851    -    901
UN13919        --> TTGTTGTACTCTCTTTAGAAACTGGTGTTGCTTAACCACTTTTGGCTGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX758699       <-- TTGTTGTACTCTCTTTAGAAACTGGTGTTGCTTAACCACTTTTGGCTGAG
EW718668       <-- TTGTTGTACTCTCTTT..................................
EV542212       <-- TTGTTGTACTCTCTTTAGAAACTGGTGTTGCTTAACCACTTTTGGCTGAG
FD537203       <-- TTGTTGTACTCTCTTTAGAAACTGGTGTTGCTTAACCACTTTTGGCTGAG
FD539935       <-- TTGTTGTACTCTCTTTAGAAACTGGTGTTGCTTAACCACTTTTGGCTGAG
FD545011       <-- TTGTTGTACTCTCTTTAGAAACTGGTGTTGCCTAACCACTTTTGGCTGAG
FD969184       <-- TTGTTGTACTCTCTTTAGAAACTGGTGTTGCTTAACCACTTTTGGCTGAG
EW713647       --> ..................................................
EW713648       --> ..................................................
FD548880       --> ..................................................
EX754349       --> ..................................................
EX755900       --> ..................................................
FD540202       --> ..................................................
FD540763       --> ..................................................
FD544291       --> ..................................................
FD973500       --> ..................................................
EV538129       --> ..................................................

               901    -    951
UN13919        --> GGTATTTTTAAGCGTTTAGTTTTGTTTACTCACAAACCTTTGACCTGAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX758699       <-- GGTATTTTTAAGCGTTTAGTTTTGTTT.......................
EW718668       <-- ..................................................
EV542212       <-- GGTATTTTTAAGCGTTTAGTTTTGTTTACTCACAAACCTTTGACCTGAGT
FD537203       <-- GGTATTTTTAAGCGTTTAGTTTTGTTTACTCACAAACCTTTGACCTGAGT
FD539935       <-- GGTATTTTTAAGC.....................................
FD545011       <-- GGTATTTTTAAGCGTTTAGTTTTGTTT.......................
FD969184       <-- GTTATTTTTAAGCGTTTAGTTTTGTTTACTCACAAACCTTTGACCTGAGT
EW713647       --> ..................................................
EW713648       --> ..................................................
FD548880       --> ..................................................
EX754349       --> ..................................................
EX755900       --> ..................................................
FD540202       --> ..................................................
FD540763       --> ..................................................
FD544291       --> ..................................................
FD973500       --> ..................................................
EV538129       --> ..................................................

               951    -   1001
UN13919        --> AATATTTTCATTTAGAAAATATCTTACTACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX758699       <-- ...............................
EW718668       <-- ...............................
EV542212       <-- AATATTTTCATTTAGg...............
FD537203       <-- AATATTTTCATTTAGAAAATATCTTACTACC
FD539935       <-- ...............................
FD545011       <-- ...............................
FD969184       <-- AATATTTTCATTTAG................
EW713647       --> ...............................
EW713648       --> ...............................
FD548880       --> ...............................
EX754349       --> ...............................
EX755900       --> ...............................
FD540202       --> ...............................
FD540763       --> ...............................
FD544291       --> ...............................
FD973500       --> ...............................
EV538129       --> ...............................