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Alignment for radish unigene UN13940

               1      -     51
UN13940        --> CAAGAAAAATGGATCAA-GATAATATGGATAAAATGGAACGGACAAAGGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX886371       <-- .AAGAAAAATGGATCAA-GATAATATGGATAAAATGGAACGGACAAAGGG
FD958277       <-- .............caAA-GATAATATGGATAAAATGGAACGGACAAAAGG
FD532089       <-- ..................................................
FD532550       <-- ..................................................
EY913855       <-- ..................................................
FD941191       <-- ..................................................
EW716562       <-- ..................................................
EV537126       <-- ..................................................
EW717803       <-- ..................................................
EX890288       <-- ..................................................
EX886765       <-- ..................................................
FD977944       --> CAAGACAAAAGGATCAAAGATAATATGGATAAAATGGAACGGACAAAGGG
EX890778       --> ..AGAAAAATGGATCAA-GATAATATGGATAAAATGGAACGGACAAAGGG
FD953794       --> ..............caaaaATAATATGGATAAAATGGAACGGACAAAAGG
EW721956       --> ..............................AAAATGGAACGGACAAAAGG
EV541427       --> ..................................................
FD528982       --> ..................................................
EW720483       --> ..................................................
EX893838       --> ..................................................
EY910020       --> ..................................................
FD528650       --> ..................................................
EV574192       --> ..................................................
FD554712       --> ..................................................
EX891079       --> ..................................................

               51     -    101
UN13940        --> ATACTACTTGGTCTAAAACCAAAATAATACATATAAAA--GGAAACAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX886371       <-- ATACTAC--TGTCTAAAACCAAAATAATACATATAAAAAAGGAAACAAAA
FD958277       <-- ATACTACTTGGTCTAAAACCAAAATAATACATATAAAA--GGAAACAAAA
FD532089       <-- .........GGTCTAAAACCAAAATAATACATA-AAAA--GGAAACAAAA
FD532550       <-- ........gaGTCTAAAACCAAAATAATACATATAAAA--GGAAACAAAA
EY913855       <-- ............................ACATATAAAA--GGAAACAAAA
FD941191       <-- ..................................................
EW716562       <-- ..................................................
EV537126       <-- ..................................................
EW717803       <-- ..................................................
EX890288       <-- ..................................................
EX886765       <-- ..................................................
FD977944       --> ATACTACTTGGTCTAAAACCAAAATAATACATATAAAA--GGAAACAAAA
EX890778       --> ATACTACT--GTCTAAAACCAAAATAATACATATAAAAAAGGAAACAAAA
FD953794       --> ATACTACTTGGTCTAAAACCAAAATAATACATTTAAAA--GGAAACAAAA
EW721956       --> ATACTACTTGGTCTAAAACCAAAATAATACATATAAAA--GGAAACAAAA
EV541427       --> ........aaGTCTAAAACCAAAATAATACATATAAAA--GGAAACAAAA
FD528982       --> ........gaGTCTAAAACCAAAATAATACATATAAAA--GGAAACAAAA
EW720483       --> .........................AATACATATAAAAAAGGAAACAAAA
EX893838       --> .........................AATACATATAAAAAAGGAAACAAAA
EY910020       --> ............................ACATATAAAA--GGAAACAAAA
FD528650       --> .....................................A--GGAAACAAAA
EV574192       --> ..................................................
FD554712       --> ..................................................
EX891079       --> ..................................................

               101    -    151
UN13940        --> GAGTTCT-CTTCTTCTTTATCCCTCAAAACTTTCACCAAGAGGTCTGTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX886371       <-- GAGTTCTTCTTCTTCTTTATCCCTCAAAACTTTCACCAAGAGGTCTGTCT  Raphanus sativus var. oleiformis
FD958277       <-- GAGTTCT-CTTCTTCTTTATCCCTCAAAACTTTCACCAAGAGGTCTGTCT  Raphanus sativus cv Rat-Tail Radish #3870
FD532089       <-- GAGTTAT-CTTCTTCTTTATCCCTCAAAACTTTCACCAAGAGGTCTGTCT  Raphanus raphanistrum subsp. maritimus
FD532550       <-- GAGTTCT-CTTCATCTTTATCCCTCAAAACTTTCACCAAGAGGTCTGTCT  Raphanus raphanistrum subsp. maritimus
EY913855       <-- GAGTTCT-CT-CATCTTTATCCCTCAAAACTTTCACCAAGAGGTCTGTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD941191       <-- ..........TCTTCTTTATCCCTCAAAACTTTCACCAAGAGGTCTGTTT  Raphanus sativus var. oleiformis
EW716562       <-- ..................................................  Raphanus sativus var. oleiformis
EV537126       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW717803       <-- ..................................................  Raphanus sativus var. oleiformis
EX890288       <-- ..................................................  Raphanus sativus var. oleiformis
EX886765       <-- ..................................................  Raphanus sativus var. oleiformis
FD977944       --> GAGTTCT-CTTCTT---TATCCCTCAAAACTTTCACCAAGAGGTCTGTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX890778       --> GAGTTCTTCTTCTTCTTTATCCCTCAAAACTTTCACCAAGAGGTCTGTCT  Raphanus sativus var. oleiformis
FD953794       --> AAGTTCT-CTTCTTCTTTATCCCTCAAAACTTTCACCAAGAGGTCTGTCT  Raphanus sativus cv Rat-Tail Radish #3870
EW721956       --> GAGTTCT-CTTCTTCTTTATCCCTCAAAACTTTCACCAAGAGGTCTGTCT  Raphanus sativus var. oleiformis
EV541427       --> GAGTTCT-CTTCTTCTTTATCCCTCAAAACTTTCACCAAGAGGTCTGTCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD528982       --> GAGTTCT-CTTCATCTTTATCCCTCAAAACTTTCACCAAGAGGTCTGTCT  Raphanus raphanistrum subsp. maritimus
EW720483       --> GAGTTCTTCTTCTTCTTTATCCCTCAAAACTTTCACCAGGAGGTCTGTCT  Raphanus sativus var. oleiformis
EX893838       --> GAGTTCTTCTTCTTCTTTATCCCTCAAAACTTTCACCAAGAGGTCTGTCT  Raphanus sativus var. oleiformis
EY910020       --> GAGTTCT-CTTCATCTTTATCCCTCAAAACTTTCACCAAGAGGTCTGTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD528650       --> GAGTTAT-CTTCTTCTTTATCCCTCAAAACTTTCACCAAGAGGTCTGTCT  Raphanus raphanistrum subsp. maritimus
EV574192       --> .....CT-CTTCATCTTTATCCCTCAAAACTTTCACCAAGAGGTCTGTCT  Raphanus raphanistrum subsp. landra
FD554712       --> .....CT-CTTCATCTTTATCCCTCAAAACTTTCACCAAGAGGTCTGTCT  Raphanus raphanistrum subsp. landra
EX891079       --> ....ctT-CTTCTTCTTTATCCCTCAAAACTTTCACCAAGAGGTCTGTCT  Raphanus sativus var. oleiformis

               151    -    201
UN13940        --> AATCAAATTAACAATAAAAACAACATTAAACAACTTAGAGCTCATCGTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX886371       <-- AATCAAATTAACAATAAAAACAACATTAAACAACTTAGAGCTCATCGTGA
FD958277       <-- AATCAAATTAACAATAAAAACAACATTAAACAACTTAGAGCTCATCGTGA
FD532089       <-- AATCAAATTAACAATAAAAACAACATTAAACAACTTAGAGCTCATCGTGA
FD532550       <-- AATCAAATTAACAATAAAAACAACATTAAACAACTTAGAGCTCATCGTGA
EY913855       <-- AATCAAATTAACAATAAAGACAACATTAAACAACTTAGAGCTCATCGTGA
FD941191       <-- AATCAAATTAACAATAAAAACAACATTAAACAACTTAGAGCTCATCGTGA
EW716562       <-- .....................AACATTAAACAACT-AGAGCTCATCGTGA
EV537126       <-- ..................................................
EW717803       <-- ..................................................
EX890288       <-- ..................................................
EX886765       <-- ..................................................
FD977944       --> AATCAAATTAACAATAAAAACAACATTAAACAACTTAGAGCTCATCGTGA
EX890778       --> AATCAAATTAACAATAAAAACAACATTAAACAACTTAGAGCTCATCGTGA
FD953794       --> AATCAAATTAACAATAAAAACAACATTAAACAACTTAAAGCTCATCGGGA
EW721956       --> AATCAAATTAACAATAAAAACAACATTAAACAACTTAGAGCTCATCGTGA
EV541427       --> AATCAAATTAACAATAAAAACAACATTAAACAACTTAAAGCTCATCGTGA
FD528982       --> AATCAAATTAACAATAAAAACAACATTAAACAACTTAGAGCTCATCGTGA
EW720483       --> AATCAAATTAACAATAAAAACAACATTAAACAACTTAGAGCTCATCGTGA
EX893838       --> AATCAAATTAACAATAAAAACAACATTAAACAACTTAGAGCTCATCGTGA
EY910020       --> AATCAAATTAACAATAAAGACAACATTAAACAACTTAGAGCTCATCGTGA
FD528650       --> AATCAAATTAACAATAAAAACAACATTAAACAACTTAGAGCTCATCGTGA
EV574192       --> AATCAAATTAACAATAAAAACAACATTAAACAACTTAGAGCTCATCGTGA
FD554712       --> AATCAAATTAACAATAAAAACAACATTAAACAACTTAAAGCTCATCGTGA
EX891079       --> AATCAAATTAACAATAAAAACAACATTAAACAACTTAGAGCTCATCGTGA

               201    -    251
UN13940        --> GACTCATCCTCCTCTTCGGCCGCTCCTTCTCCACC-AGCACCACCTGGCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX886371       <-- GACTCATCCTCCTCTTCGGTCGCTCCTTCTCCACC-AGCACCACCTGGCG  Raphanus sativus var. oleiformis
FD958277       <-- GACTCATCCTCATCTTCGGCCGCTCCTTCTCCACC-AGCACCACCTGGCG  Raphanus sativus cv Rat-Tail Radish #3870
FD532089       <-- GACTCATCCTCCTCTTCGGCCGCTCCTTCTCCACC-AGCACCACCTGGCG  Raphanus raphanistrum subsp. maritimus
FD532550       <-- GACTCATCCTCCTCTTCGGCCGCTCCTTCTCCACC-AGCACCACCTGGCG  Raphanus raphanistrum subsp. maritimus
EY913855       <-- GACTCATCCTCCTCTTCGGCCGCTCCTTCTCCACCCAGCACCACCTGGCG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD941191       <-- GACTCATCCTCCTCTTAGGTCGCTCCTTCTCCACC-AGCACCACCTGGCG  Raphanus sativus var. oleiformis
EW716562       <-- GACTCATC-TCCTCTTCGGTCGCTCCTTCTCCACCCAGCACCACCTGGCG  Raphanus sativus var. oleiformis
EV537126       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW717803       <-- ..................................................  Raphanus sativus var. oleiformis
EX890288       <-- ..................................................  Raphanus sativus var. oleiformis
EX886765       <-- ..................................................  Raphanus sativus var. oleiformis
FD977944       --> GACTCATCCTCATCTTCGGCCGCTCCTTCTCCACC-AGCACCACCTGGCG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX890778       --> GACTCATCCTCCTCTTCGGTCGCTCCTTCTCCACC-AGCACCACCTGGCG  Raphanus sativus var. oleiformis
FD953794       --> GACTCATCCTCATCTTCGGCCGCTCCTTTTCCACC-AGCACCACCTGGCG  Raphanus sativus cv Rat-Tail Radish #3870
EW721956       --> GACTCATCCTCCTCTTCGGTCGCTCCTTCTCCACC-AGCACCACCTGGCG  Raphanus sativus var. oleiformis
EV541427       --> GACTCATCCTCATCTTCGGCCGCTCCTTCTCCACC-AGCACCACCTGGCG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD528982       --> GACTCATCCTCCTCTTCGGCCGCTCCTTCTCCACC-AGCACCACCTGGCG  Raphanus raphanistrum subsp. maritimus
EW720483       --> GACTCATCCTCCTCTTCGGTCGCTCCTTCTCCACC-AGCACCACCTGGCG  Raphanus sativus var. oleiformis
EX893838       --> GACTCATCCTCCTCTTCGGTCGCTCCTTCTCCACC-AGCACCACCTGGCG  Raphanus sativus var. oleiformis
EY910020       --> GACTCATCCTCCTCTTCGGCCGCTCCTTCTCCACC-AGCACCACCTGGCG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD528650       --> GACTCATCCTCCTCTTCGGCCGCTCCTTCTCCACC-AGCACCACCTGGCG  Raphanus raphanistrum subsp. maritimus
EV574192       --> GACTCATCCTCCTCTTCGGCCGCTCCTTCTCCACC-AGCACCACCTGGCG  Raphanus raphanistrum subsp. landra
FD554712       --> GACTCATCC-GCTCTTCGGCCGCTCCTTCTCCACC-AGCACCACCTGGCG  Raphanus raphanistrum subsp. landra
EX891079       --> GACTCATCCTCCTCTTCGGTCGCTCCTTCTCCACC-AGCACCACCTGGCG  Raphanus sativus var. oleiformis

               251    -    301
UN13940        --> CACCACCTGACCTCTGATAAACGGCCGTGATGATTGGGTTACAAACTGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX886371       <-- CACCACCTGACCTCTGATAAA.............................
FD958277       <-- CACCACCTGACCTCTGATAAACGGCCGTGATGATTGGGTTACAAACTGCC
FD532089       <-- CACCACCTGACCTCTGATAAACGGCCGTGATGATTGGGTTACAAACTGCC
FD532550       <-- CACCACCTGACCTCTGATAAACGGCCGTGATGATTGGGTTACAAACTGCC
EY913855       <-- CACCACCTGACCTCTGATAAACGGCCGTGATGATTGGGTTACAAACTGCC
FD941191       <-- CACCACCTGACCTATGATAAACGGCCGTGATGATTGGGTTACAAACTGCC
EW716562       <-- CACCACCTGACCTCTGATAAACGGCCGTGATGATTGGGTTACAAACTGCC
EV537126       <-- ..................................................
EW717803       <-- ..................................................
EX890288       <-- ..................................................
EX886765       <-- ..................................................
FD977944       --> CACCACCTGACCTCTGATAAACGGCCGTGATGATTGGGTTACAAACTGCC
EX890778       --> CACCACCTGACCTCTGATAAA.............................
FD953794       --> CACCACCTGACCTCTGATAAACGGCCGTGATGATTGGGTTACAAACTGCC
EW721956       --> CACCACCTGACCTCTGATAAACGGCCGTGATGATTGGGTTACAAACTGCC
EV541427       --> CACCACCTGACCTCTGATAAACGGCCGTGATGATTGGGTTACAAACTGCC
FD528982       --> CACCACCTGACCTCTGATAAACGGCCGTGATGATTGGGTTACAAACTGCC
EW720483       --> CACCACCTGACCTCTGATAAACGGCCGTGATGATTGGGTTACAAACTGCC
EX893838       --> CACCACCTGACCTCTGATAAACGGCCGTGATGATTGGGTTACAAACTGCC
EY910020       --> CACCACCTGACCTCTGATAAACGGCCGTGATGATTGGGTTACAAACTGCC
FD528650       --> CACCACCTGACCTCTGATAAACGGCCGTGATGATTGGGTTACAAACTGCC
EV574192       --> CACCACCTGACCTCTGATAAACGGCCGTGATGATTGGGTTACAAACTGCC
FD554712       --> CACCACCTGACCTCTGATAAACGGCCGTGATGATTGGGTTACAAACTGCC
EX891079       --> CACCACCTGACCTCTGATAAACGGCCGTGATGATTGGGTTACAAACTGCC

               301    -    351
UN13940        --> TCTACTTCCTTCAACTTCTCGTCGTACTCTTCCTTCTCTGAGTTTTGGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX886371       <-- ..................................................  Raphanus sativus var. oleiformis
FD958277       <-- TCTACTTCCTTCAACTTCTCGTCGTACTCTTCCTTCTCTGAGTTTTGGTT  Raphanus sativus cv Rat-Tail Radish #3870
FD532089       <-- TCTACTTCCTTCAACTTCTCGTCGTACTCTTCCTTCTCTGAGTTTTGGTT  Raphanus raphanistrum subsp. maritimus
FD532550       <-- TCTACTTCCTTCAACTTCTCGTCGTACTCTTCCTTCTCTGAGTTTTGGTT  Raphanus raphanistrum subsp. maritimus
EY913855       <-- TCTACTTCCTTCAACTTCTCGTCGTACTCTTCCTTCTCTGAGTTTTGGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD941191       <-- c.................................................  Raphanus sativus var. oleiformis
EW716562       <-- TCTACTTCCTTCAACTTCTCGTCGTACTCTTCCTTCTCCGAGTTTTGGTT  Raphanus sativus var. oleiformis
EV537126       <-- ...tacTCCTTCAACTTCTCGTCGTACTCTCCTTTCTCCGAGTTTTGGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW717803       <-- ..................................................  Raphanus sativus var. oleiformis
EX890288       <-- ..................................................  Raphanus sativus var. oleiformis
EX886765       <-- ..................................................  Raphanus sativus var. oleiformis
FD977944       --> TCTACTTCCTTCAACTTCTCGTCGTACTCTTCCTTCTCTGAGTTTTGGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX890778       --> ..................................................  Raphanus sativus var. oleiformis
FD953794       --> TCTACTTCCTTCAACTTCTCGTCGTACTCTTCCTTCTCTGAGTTTTGGTT  Raphanus sativus cv Rat-Tail Radish #3870
EW721956       --> TCTACTTCCTTCAACTTCTCGTCGTACTCTTCCTTCTCCGAGTTTTGGTT  Raphanus sativus var. oleiformis
EV541427       --> TCTACTTCCTTCAACTTCTCGTCGTACTCTTCCTTCTCCGAGTTTTGGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD528982       --> TCTACTTCCTTCAACTTCTCGTCGTACTCTTCCTTCTCTGAGTTTTGGTT  Raphanus raphanistrum subsp. maritimus
EW720483       --> TCTACTTCCTTCAACTTCTCGTCGTACTCTTCCTTCTCCGAGTTTTGGTT  Raphanus sativus var. oleiformis
EX893838       --> TCTACTTCCTTCAACTTCTCGTCGTACTCTTCCTTCTCCGAGTTTTGGTT  Raphanus sativus var. oleiformis
EY910020       --> TCTACTTCCTTCAACTTCTCGTCGTACTCTTCCTTCTCTGAGTTTTGGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD528650       --> TCTACTTCCTTCAACTTCTCGTCGTACTCTTCCTTCTCTGAGTTTTGGTT  Raphanus raphanistrum subsp. maritimus
EV574192       --> TCTACTTCCTTCAACTTCTCGTCGTACTCTTCCTTCTCTGAGTTTTGGTT  Raphanus raphanistrum subsp. landra
FD554712       --> TCTACTTCCTTCAACTTCTCGTCGTACTCTTCCTTCTCTGAGTTTTGGTT  Raphanus raphanistrum subsp. landra
EX891079       --> TCTACTTCCTTCAACTTCTCGTCGTACTCTTCCTTCTCCGAGTTTTGGTT  Raphanus sativus var. oleiformis

               351    -    401
UN13940        --> CTCGTCAAGCCACTCCAAGGCTTCTTTCGTCGCTGCCTCAATCTTCTCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX886371       <-- ..................................................
FD958277       <-- CTCGTCAAGCCACTCCAAGGCTTCTTTCGTCGCTGCCTCAATCTTCTCCT
FD532089       <-- CTCGTCAAGCCACTCCAAGGCTTCTTTCGTCGCTGCCTCAATCTTCTCCT
FD532550       <-- CTCGTCGAGCCACTCCAAGGCTTCTTTCGTCGCTGCCTCAATCTTCTCCT
EY913855       <-- CTCGTCAAGCCACTCCAAGGCTTCTTTCGTCGCTGCCTCAATCTTCTCCT
FD941191       <-- ..................................................
EW716562       <-- CTCGTCGAGCCACTCCAAGGCTTCTTTCGTCGCTGCCTCAATCTTCCCCT
EV537126       <-- CTCGTCAAGCCACTCCAAGGCTTCTTTCGTCGCTGCCTCAATCTTCTCCT
EW717803       <-- ..................................................
EX890288       <-- ..................................................
EX886765       <-- ..................................................
FD977944       --> CTCGTCAAGCCACTCCAAGGCTTCTTTCGTCGCTGCCTCAATCTTCTCCT
EX890778       --> ..................................................
FD953794       --> CTCGTCAAGCCACTCCAAGGCTTCTTTCGTCCCTGCCTCAATCTTCTCCT
EW721956       --> CTCGTCGAGCCACTCCAAGGCTTCTTTCGTCGCTGCCTCAATCTTCCCCT
EV541427       --> CTCGTCAAGCCACTCCAAGGCTTCTTTCGTCGCTGCCTCAATCTTCTCCT
FD528982       --> CTCGTCGAGCCACTCCAAGGCTTCTTTCGTCGCTGCCTCAATCTTCTCCT
EW720483       --> CTCGTCAAGCCACTCCAAGGCTTCTTTCGTCGCTGCCTCAATCTTCTCCT
EX893838       --> CTCGTCAAGCCACTCCAAGGCTTCTTTCGTAGCTGCCTCAATCTTCTCCT
EY910020       --> CTCGTCAAGCCACTCCAAGGCTTCTTTCGTCGCTGCCTCAATCTTCTCCT
FD528650       --> CTCGTCAAGCCACTCCAAGGCTTCTTTCGTCGCTGCCTCAATCTTCTCCT
EV574192       --> CTCGTCAAGCCACTCCAAGGCTTCTTTCGTCGCTGCCTCAATCTTCTCCT
FD554712       --> CTCGTCAAGCCACTCAAAGGCTTCTTTCGTCGCTGCCTCAATCTTCTCCT
EX891079       --> CTCGTCAAGCCACTCCAAGGCTTCTTTCGTCGCTGCCTCAATCTTCTCCT

               401    -    451
UN13940        --> T-CTCGTCACCCTCAAGTTTGTCTGCGAGCTTGTCCTTGTCGTTTATTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX886371       <-- ..................................................
FD958277       <-- T-CTCGTCACCCTCAAGTTTGCCTGCGAGCTTGTCCTTGTCGTTTATTTG
FD532089       <-- T-CTCCTCACCCTCAAGTTTGTCTGCGAGCTTGTCCTTGTCGTTTATTTG
FD532550       <-- T-CTCGTCACCCTCAAGTTTGTCTGCGAGCTTGTCCTTGTCGTTTATTTG
EY913855       <-- T-CTCGTCACCCTCAAGTTTGTCTGCGAGCTTGTCCTTGTCGTTTATTTG
FD941191       <-- ..................................................
EW716562       <-- T-CTCGTCACCCTCAAGTTTGTCTGCGAGCTTGTCCTTGTCGTTTATTTG
EV537126       <-- TTCTCGTCACCCTCAAGTTTGTCTGCGAGCTTGTCCTTGTCGTTTATTTG
EW717803       <-- ..................................................
EX890288       <-- ..................................................
EX886765       <-- ..................................................
FD977944       --> T-CTCGTCACCCTCAAGTTTGTCTGCGAGCTTGTCCTTGTCGTTTATTTG
EX890778       --> ..................................................
FD953794       --> T-CTCGTCACCCTCAAGTTTGCCTGCGAGCTTGTCCTTGTCGTTTATTTG
EW721956       --> T-CTCGTCACCCTCAAGTTTGTCTGCGAGCTTGTCCTTGTCGTTTATTTG
EV541427       --> T-CTCGTCACCCTCAAGTTTGTCTGCGAGCTTGTCCTTGTCGTTTATTTG
FD528982       --> T-CTCGTCACCCTCAAGTTTGTCTGCGAGCTTGTCCTTGTCGTTTATTTG
EW720483       --> T-CTCGTCACCCTCAAGTTTGTCTGCGAGCTTGTCCTTGTCGTTTATTTG
EX893838       --> T-CTCGTCACCCTCAAGTTTGTCTGCGAGCTTGTCCTTGTCGTTTATTTG
EY910020       --> T-CTCGTCACCCTCAAGTTTGTCTGCGAGCTTGTCCTTGTCGTTTATTTG
FD528650       --> T-CTCCTCACCCTCAAGTTTGTCTGCGAGCTTGTCCTTGTCGTTTATTTG
EV574192       --> T-CTCGTCACCCTCAAGTTTGTCTGCGAGCTTGTCCTTGTCGTTTATTTG
FD554712       --> T-CTCGTCACCCTCAAGTTTGTCTGCGAGATTGTCCTTGTCGTTTATTTG
EX891079       --> T-CTCGTCACCCTCAAGTTTGTCTGCGAGCTTGTCCTTGTCGTTTATTTG

               451    -    501
UN13940        --> GTTCTTCATGTTGTACACGTAAGTCTCGAGGCTGTTCCTTGCGTCGATTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX886371       <-- ..................................................
FD958277       <-- GTTCTTCATGTTGTACACGTAAGTCTCGAGGCTGTCCCTc..........
FD532089       <-- GTTCTTCATGTTGTACACGTAAGTCTCGAGGCTGTTCCTTGCGTCGATTC
FD532550       <-- GTTCTTCATGTTGTAC..................................
EY913855       <-- GTTCTTCATGTTGTACACGTAAGTCTCGAGGCTGTTCCTTGCGTCGATTC
FD941191       <-- ..................................................
EW716562       <-- GTTCTTCATGTTGTACACGTAAGTCTCGAGGCTGTTCCTTGCGTCGATTC
EV537126       <-- GTTCTTCATGTTGTACACGTAAGTCTCGAGGCTATTCCTTGCGTCGATTC
EW717803       <-- ..................................................
EX890288       <-- ..................................................
EX886765       <-- ..................................................
FD977944       --> GTTCTTCATGTTGTACACGTAAGTCTCGAGGCTGTTCCTCGCGTCGATTC
EX890778       --> ..................................................
FD953794       --> GTTCTTCATGTTGTACACGTAAGTCTCGAGGCTGTCCCTc..........
EW721956       --> GTTCTTCATGTTGTACACGTAAGTCTCGAGGCTGTTCCTTGCGTCGATTC
EV541427       --> GTTCTTCATGTTGTACACGTAAGTCTCGAGGCTATTCCTTGCGTCGATTC
FD528982       --> GTTCTTCATGTTGTAC..................................
EW720483       --> GTTCTTCATGTTGTACACGTAAGTCTCGAGGCTGTTCCTTGCGTCGATTC
EX893838       --> GTTCTTCATGTTGTACACGTAAGTCTCGAGGCTGTTCCTTGCGTCGATTC
EY910020       --> GTTCTTCATGTTGTACACGTAAGTCTCGAGGCTGTTCCTTGCGTCGATTC
FD528650       --> GTTCTTCATGTTGTACACGTAAGTCTCGAGGCTGTTCCTTGCGTCGATTC
EV574192       --> GTTCTTCATGTTGTACACGTAAGTCTCGAGGCTGTTCCTTGCGTCGATTC
FD554712       --> GTTCTTCATGTTGTACGCGTAAGTCTCGAGGCTGTTCCTTGCGTCGATTC
EX891079       --> GTTCTTCATGTTGTACACGTAAGTCTCGAGGCTGTTCCTTGCGTCGATTC

               501    -    551
UN13940        --> TCTCCTTCACCTTCTTGTCTTCCTCTGCAAACTCCTCTGCCTCCTTCACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX886371       <-- ..................................................
FD958277       <-- ..................................................
FD532089       <-- TCTCCTTCACCTTCTTGTCTTCCTCTGCAAACTCCTCTGCCTCCTTCACC
FD532550       <-- ..................................................
EY913855       <-- TCTCCTTCACCTTCTTGTCTTCCTCTGCAAACTCCTCTGCCTCCTTCACC
FD941191       <-- ..................................................
EW716562       <-- TCTCCTTCACCTTCTTGTCTTCCTCTGCAAACTCCTCTGCCTCCTTCACC
EV537126       <-- TCTCCTTCACCTTCTTGTCTTCCTCTGCAAACTCCTCTGCCTCCTTCACC
EW717803       <-- .............................................TCACC
EX890288       <-- ..................................................
EX886765       <-- ..................................................
FD977944       --> TCTCCTTCACCTTCTTGTCTTCCTCTGCAAACTCCTCTGCCTCCTTCACC
EX890778       --> ..................................................
FD953794       --> ..................................................
EW721956       --> TCTCCTTCACCTTCTTGTCTTCCTCTGCAAACTCCTCTGCCTCCTTCACC
EV541427       --> TCTCCTTCACCTTCTTGTCTTCCTCTGCAAACTCCTCTGCCTCCTTCACC
FD528982       --> ..................................................
EW720483       --> TCTCCTTCACCTTCTTGTCTTCCTCTGCAAACTCCTCTGCCTCCTTCACC
EX893838       --> CCTCCTTCACCTTCTCGTCTTCCTCTGCAAACTCCTCTGCCTCCTTCACC
EY910020       --> TCTCCTTCACCTTCTTGTCTTCCTCTGCAAACTCCTCTGCCTCCTTCACC
FD528650       --> TCTCCTTCACCTTCTTGTCTTCCTCTGCAAACTCCTCTGCCTCCTTCACC
EV574192       --> TCTCCTTCACCTTCTTGTCTTCCTCTGCAAACTCCTCTGCCTCCTTCACC
FD554712       --> TCTCCTTCACCTTCTTGTCTTCCTCTGCAAACTCCTCTGCCTCCTTCACC
EX891079       --> TCTCCTTCACCTTCTTGTCTTCCTCTGCAAACTCCTCTGCCTCCTTCACC

               551    -    601
UN13940        --> ATCCGGTCAATCTCTTCCTGGCTCAGACGTCCCTTCTCGTTTGTGATTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX886371       <-- ..................................................  Raphanus sativus var. oleiformis
FD958277       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD532089       <-- ATCCAGTCAATCTCTTCCTGGCTCAGACGTCCCTTCTCGTTTGTGATTGT  Raphanus raphanistrum subsp. maritimus
FD532550       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY913855       <-- ATCCGGTCAATCTCTTCCTGGCTCAGACGACCCTTCTCGTTTGTGATTGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD941191       <-- ..................................................  Raphanus sativus var. oleiformis
EW716562       <-- ATCCGGTCAATCTCTTCCTGGCTCAGACGTCCCTTCTCGTTTGTGATTGT  Raphanus sativus var. oleiformis
EV537126       <-- ATCCGGTCAATCTCTTCTTGGCTCAAACGTCCCTTCTCGTTTGTGATTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW717803       <-- ATCCGGTCAATCTCT-CCT-GCTCAGACGTCCCTTCTCGTTTGTGATTGT  Raphanus sativus var. oleiformis
EX890288       <-- ..................................................  Raphanus sativus var. oleiformis
EX886765       <-- ..................................................  Raphanus sativus var. oleiformis
FD977944       --> ATCCGGTCAATCTCTTCCTGGCTCAAACGTCCCTTCTCGTTTGTGATTGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX890778       --> ..................................................  Raphanus sativus var. oleiformis
FD953794       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EW721956       --> ATCCGGTCAATCTCTTCCTGGCTCAGACGTCCCTTCTCGTTTGTGATTGT  Raphanus sativus var. oleiformis
EV541427       --> ATCCGGTCAATCTCTTCTTGGCTCAAACGTCCCTTCTCGTTTGTGATTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD528982       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EW720483       --> ATCCGGTCAATCTCTTCCTGGCTCAGACGTCCCTTCTCGTTTGTGATTGT  Raphanus sativus var. oleiformis
EX893838       --> ATCCGGTCAATCTCTTCCTGGCTCAGACGTCCCTTCTCGTTTGTGATTGT  Raphanus sativus var. oleiformis
EY910020       --> ATCCGGTCAATCTCTTCCTGGCTCAGACGACCCTTCTCGTTTGTGATTGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD528650       --> ATCCAGTCAATCTCTTCCTGGCTCAGACGTCCCTTCTCGTTTGTGATTGT  Raphanus raphanistrum subsp. maritimus
EV574192       --> ATCCGGTCAATCTCTTCCTGGCTCAGACGACCCTTCTCGTTTGTGATTGT  Raphanus raphanistrum subsp. landra
FD554712       --> ATCCGGTCAATCTCTTCCTGACTCAGACGACCCTTCTCGTTTGTGATTGT  Raphanus raphanistrum subsp. landra
EX891079       --> ATCCGGTCAATCTCTTCCTGGCTCAAACGTCCCTTCTCGTTTGTGAT---  Raphanus sativus var. oleiformis

               601    -    651
UN13940        --> GATCTTCTCTGATTTACCACTTGCCTTGTCCTCTGCCTTCACGTTCAGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX886371       <-- ..................................................  Raphanus sativus var. oleiformis
FD958277       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD532089       <-- GATCTTCTCTGATTTACCACTTGCCTTGTCCTCTGCCTTCACGTTCAGGA  Raphanus raphanistrum subsp. maritimus
FD532550       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY913855       <-- GATCTTCTCTGATTTACCACTTGCCTTGTCCTCTGCCTTCACGTTCAGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD941191       <-- ..................................................  Raphanus sativus var. oleiformis
EW716562       <-- GATCTTCTCTGATTTACCACTTGCCTTGTCCTCTGCTTTCACGTTCAGGA  Raphanus sativus var. oleiformis
EV537126       <-- GATCTTCTCTGATTTACCACTTGCCTTGTCCTCTGCCTTCACGTTCAGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW717803       <-- GATCTTCTCTGATTTACCACTTGCCTTGTCCTCTGCTTTCACGTTCAGGA  Raphanus sativus var. oleiformis
EX890288       <-- ..................................gctTTCACGCTCAGGA  Raphanus sativus var. oleiformis
EX886765       <-- ..................................................  Raphanus sativus var. oleiformis
FD977944       --> GATCTTCTCTGATTTACCACTTGCCTTGTCCTCTGCCTTCACGTTCAGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX890778       --> ..................................................  Raphanus sativus var. oleiformis
FD953794       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EW721956       --> GATCTTCTCTGATTTACCACTTGCCTTGTCCTCTGCTTTCACGTTCAGGA  Raphanus sativus var. oleiformis
EV541427       --> GATCTTCTCTGATTTACCACTTGCCTTGTCCTCTGCCTTCACGTTCAGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD528982       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EW720483       --> GATCTTCTCTGATTTACCACTTGCCTTGTCCTCTGCTTTCACGTTCAGGA  Raphanus sativus var. oleiformis
EX893838       --> GATCTTCTCTGATTTACCACTTACCTTGTCCTCTGCTTTCACGCTCAGGA  Raphanus sativus var. oleiformis
EY910020       --> GATCTTCTCTGATTTACCACTTGCCTTGTCCTCTGCCTTCACGTTCAGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD528650       --> GATCTTCTCTGATTTACCACTTGCCTTGTCCTCTGCCTTCACGTTCAGGA  Raphanus raphanistrum subsp. maritimus
EV574192       --> GATCTTCTCTGATTTACCACTTGCCTTGTCCTCTGCCTTCACGTTCAGGA  Raphanus raphanistrum subsp. landra
FD554712       --> GATCTTCTCTGATTTACCACTTGCCTTGTCCTCTGCCTTCACGTTCAGGA  Raphanus raphanistrum subsp. landra
EX891079       --> ---CTTCTCTGATTTACCACTTGCCTTGTCCTCTGCTTTCACGTTCAGGA  Raphanus sativus var. oleiformis

               651    -    701
UN13940        --> TACCGTTGGCGTCAACTTCAAAGGTAACCTCGATTTGAGGTGTTCCTCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX886371       <-- ..................................................  Raphanus sativus var. oleiformis
FD958277       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD532089       <-- TACCc.............................................  Raphanus raphanistrum subsp. maritimus
FD532550       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY913855       <-- TACCGTTGGCGTCCACTTCAAAGGTAACCTCGATTTGAGGTGTTCCTCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD941191       <-- ..................................................  Raphanus sativus var. oleiformis
EW716562       <-- TACCGTTGGCGTCAACTTCAAAGGTAACCTCGATTTGAGGTGTTCCTCTT  Raphanus sativus var. oleiformis
EV537126       <-- TACCGTTGGCGTCCACTTCAAAGGTAACCTCGATTTGAGGTGTTCCTCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW717803       <-- TACCGTTGGCGTCAACTTCAAAGGTAACCTCGATTTGAGGTGTTCCTCTT  Raphanus sativus var. oleiformis
EX890288       <-- TACCGTTGGCGTCAACTTCAAAGGTA-CCTCGATTTGAGGTGTTCCTCTT  Raphanus sativus var. oleiformis
EX886765       <-- ............CAACTTCAAAGGTA-CCTCGATTTGAGGTGCTCCTCTT  Raphanus sativus var. oleiformis
FD977944       --> TACCGTTGGCGTCCACTTCAAAGGTAACCTCGATTTGAGGTGTTCCTCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX890778       --> ..................................................  Raphanus sativus var. oleiformis
FD953794       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EW721956       --> TACCGTTGGCGTCAACTTCAAAGGTAACCTCGATTTGAGGTGTTCCTCTT  Raphanus sativus var. oleiformis
EV541427       --> TACCGTTGGCGTCCACTTCAAAGGTAACCTCGATTTGAGGTGTTCCTCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD528982       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EW720483       --> TACCGTTGGCGTCAACTTCAAAGGTAACCTCGATTTGAGGTGTTCCTCTT  Raphanus sativus var. oleiformis
EX893838       --> TACCGTTGGCGTCAACTTCAAAGGTAACCTCGATTTGAGGTGTTCCTCTT  Raphanus sativus var. oleiformis
EY910020       --> TACCGTTGGCGTCCACTTCAAAGGTAACCTCGATTTGAGGTGTTCCTCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD528650       --> TACCc.............................................  Raphanus raphanistrum subsp. maritimus
EV574192       --> TACCGTTGGCGTCCACTTCAAAGGTAACCTCGATTTGAGGTGTTCCTCTT  Raphanus raphanistrum subsp. landra
FD554712       --> TACCGTTGGCGTCCACTTCAAAGGTAACCTCGATTTGAGGTGTTCCTCTT  Raphanus raphanistrum subsp. landra
EX891079       --> TACCGTTGGCGTCAACTTCAAAGGTAACCTCGATTTGAGGTGCTCCTCTT  Raphanus sativus var. oleiformis

               701    -    751
UN13940        --> GGTGCTGGTGGGATTCCGGTGAGGTCGAAGTTTCCGAGCAGTCTGCAGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX886371       <-- ..................................................  Raphanus sativus var. oleiformis
FD958277       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD532089       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD532550       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY913855       <-- GGTGCTGGTGGGATTCCGGTGAGGTCGAAGTTCCCGAGCAGCCTGCAGTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD941191       <-- ..................................................  Raphanus sativus var. oleiformis
EW716562       <-- GGTGCTGGTGGGATTCCGGTGAGGTCGAAGTTTCCGAGCAGTCTGCAGTC  Raphanus sativus var. oleiformis
EV537126       <-- GGTGCTGGTGGGATTCCGGTGAGGTCGAAGTTACCGAGCAGCCTGCAGTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EW717803       <-- GGTGCTGGTGGGATTCCGGTGAGGTCGAAGTTTCCGAGCAGTCTGCAGTC  Raphanus sativus var. oleiformis
EX890288       <-- GGTGCTGGTGGGATTCCGGTGAGGCCGAAGTTTCCGAGCAGTCTGCAGTC  Raphanus sativus var. oleiformis
EX886765       <-- GGTGCTGGTGGGATTCCGGTGAGGTCGAAGTTTCCGGGCAGTCTGCAGTC  Raphanus sativus var. oleiformis
FD977944       --> GGTGCTGGTGGGATTCCGGTG.............................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX890778       --> ..................................................  Raphanus sativus var. oleiformis
FD953794       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EW721956       --> GGTGCTGGTGGGATTCCGGTGAGGTCGAAGTTTCCGAGCAGTCTGCAGTC  Raphanus sativus var. oleiformis
EV541427       --> GGTGCTGGTGGGATTCCGGTGAGGTCGAAGTTACCGAGCAGCCTGCAGTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD528982       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EW720483       --> GGTGCTGGTGGGATTCCGGTGGGGTCGAAGTTTCCGAGCAGTC.......  Raphanus sativus var. oleiformis
EX893838       --> GGTGCTGGTGGGATTCCGGTGAGGCCGAAGTTTCCGAGCAGTCTGCAGTC  Raphanus sativus var. oleiformis
EY910020       --> GGTGCTGGTGGGATTCCGGTGAGGTCGAAGTTCCCGAGCAGCCTGCAGTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD528650       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV574192       --> GGTGCTGGTGGGATTCCGGTGAGGTCGAAGTTCCCGAGCAGCCTGCAGTC  Raphanus raphanistrum subsp. landra
FD554712       --> GGTGCTGGTGGGATTCCGGTGAGGTCGAA.....................  Raphanus raphanistrum subsp. landra
EX891079       --> GGTGCTGGTGGGATTCCGGTGAGGTCGAAGTTTCCGGGCAGTCTGCAGTC  Raphanus sativus var. oleiformis

               751    -    801
UN13940        --> CTTGGTGAGACTTCGCTCACCTTCAAA-GACCTGAATGGAGACGGTGGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX886371       <-- ..................................................
FD958277       <-- ..................................................
FD532089       <-- ..................................................
FD532550       <-- ..................................................
EY913855       <-- CTTGGTGAGACTTCGCTCACCTTCAAA-GACCTGAATGGAGACAGTGGTC
FD941191       <-- ..................................................
EW716562       <-- CTTGGTGAGACTTCGCTCACCTTCAAA-GACCTGAATGGAGACGGTGGTC
EV537126       <-- CTTGGTGAGACTTCGCTCACCTTCAAA-GACCTGAATGGAGACGGTGGTC
EW717803       <-- CTTGGTGAGACTTCGCTCACCTTCAAA-GACCTGAATGGAGACGGTGGTC
EX890288       <-- CTTGGTGAGACTTCGCTCACCTTCAAAAGACCTGAATGGAGACGGTGGTC
EX886765       <-- CTTGGTGAGACTTCGCTCACCTTCAAA-AGACTGAATGGAGACGGTGGTC
FD977944       --> ..................................................
EX890778       --> ..................................................
FD953794       --> ..................................................
EW721956       --> CTTGGTGAGACTTCGCTCACCTTCAAA-GACCTGAATGGA..........
EV541427       --> CTTGGTGAGACTTCGCTCACCTTCAAA-GACCTGAATGGAGACGGTGGTC
FD528982       --> ..................................................
EW720483       --> ..................................................
EX893838       --> CTTGGTGAGACTTCGCTCACCTTCAAA-GACCTGAATGGA..........
EY910020       --> CTTGGTGAGACTTCGCTCACCTTCAAA-GACCTGAATGGAGACAGTGGTC
FD528650       --> ..................................................
EV574192       --> CTTGGTGAGACTTCGCTCACC.............................
FD554712       --> ..................................................
EX891079       --> CTTGGTGAGACTT.....................................

               801    -    851
UN13940        --> TGTTGGTCTTGGTATGTCGTGAACACCTGAGACTTCTTGGTCGGAATAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX886371       <-- ..................................................
FD958277       <-- ..................................................
FD532089       <-- ..................................................
FD532550       <-- ..................................................
EY913855       <-- TGTTGGTCc.........................................
FD941191       <-- ..................................................
EW716562       <-- TGTTGGTCTTGGTATGTCGTGAACACCTGAGACTTCTTGGTCGGAATAAC
EV537126       <-- TGTTGGTCTTGGTATGTCGTGAACACCTGAGACTTCTTGGTCGGAATAAC
EW717803       <-- TGTTGGTCTTGGTATGTCGTGAACACCTGAGACTTCTTGGTCGGAATAAC
EX890288       <-- TGTTGGTCTTGGTATGTCGTGAACACCTGAGACTTCTTGGTCGGAATAAC
EX886765       <-- TGTTGGTCTTGGTATGTCGTGAACACCTGAGACTTCTTGGTCGGAATAAC
FD977944       --> ..................................................
EX890778       --> ..................................................
FD953794       --> ..................................................
EW721956       --> ..................................................
EV541427       --> TGTTGGTCTTGGTATGTCGTGAACACCTGAGACTTCTTGGTCGGAA....
FD528982       --> ..................................................
EW720483       --> ..................................................
EX893838       --> ..................................................
EY910020       --> TGTTGGTCc.........................................
FD528650       --> ..................................................
EV574192       --> ..................................................
FD554712       --> ..................................................
EX891079       --> ..................................................

               851    -    901
UN13940        --> TGTGTTTCTCGGGATAAGTTTGGTCATCACTCCTCCCACGGTCTCAATAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX886371       <-- ..................................................
FD958277       <-- ..................................................
FD532089       <-- ..................................................
FD532550       <-- ..................................................
EY913855       <-- ..................................................
FD941191       <-- ..................................................
EW716562       <-- TGTGTTTCTCGGGATAAGTTTGGTCATCACTCCTCCCACc..........
EV537126       <-- TGTGTTTCTCGGGATAAGTTTGGTCATCACTCCTCCCACGGTCTCAATAC
EW717803       <-- TGTGTTTCTCGGGATAAGTCTGGTCATCACTCCTCCCACGGTCTCAATAC
EX890288       <-- TGTGTTTCTCGGGATAAGTTTGGTCATCACTCCTCCCACGGTCTCAATAC
EX886765       <-- TGCGTTTCTCAGGATAAGTTTGGTCATCACTCCTCCCACGGTCTCAATAC
FD977944       --> ..................................................
EX890778       --> ..................................................
FD953794       --> ..................................................
EW721956       --> ..................................................
EV541427       --> ..................................................
FD528982       --> ..................................................
EW720483       --> ..................................................
EX893838       --> ..................................................
EY910020       --> ..................................................
FD528650       --> ..................................................
EV574192       --> ..................................................
FD554712       --> ..................................................
EX891079       --> ..................................................

               901    -    951
UN13940        --> CCAAAGTGAGTGGTGCAACGTCAAGAAGAAGGATGTCTTTGGTCTCGTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX886371       <-- ..................................................
FD958277       <-- ..................................................
FD532089       <-- ..................................................
FD532550       <-- ..................................................
EY913855       <-- ..................................................
FD941191       <-- ..................................................
EW716562       <-- ..................................................
EV537126       <-- CCAAAGTGAGTGGTGCAACGTCAAGAAGAAGGATATCTTTGGTCTCATCA
EW717803       <-- CCAAAGTGAGTGGTGCAACGTCAAGAAGAAGGATGTCTTTGGTCTCGTCA
EX890288       <-- CCAAAGTGAGTGGTGCAACGTCAAGAAGAAGGATGTCTTTGGTCTCGTCA
EX886765       <-- CCAAAGTGAGTGGTGCAACGTCAAGAAGAAGGATGTCTTTGGTCTCGTCA
FD977944       --> ..................................................
EX890778       --> ..................................................
FD953794       --> ..................................................
EW721956       --> ..................................................
EV541427       --> ..................................................
FD528982       --> ..................................................
EW720483       --> ..................................................
EX893838       --> ..................................................
EY910020       --> ..................................................
FD528650       --> ..................................................
EV574192       --> ..................................................
FD554712       --> ..................................................
EX891079       --> ..................................................

               951    -   1001
UN13940        --> CCACCTTCTCCGCTCAGAATACCACCCTGAACAGCCGCACCGTAAGCAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX886371       <-- ..................................................
FD958277       <-- ..................................................
FD532089       <-- ..................................................
FD532550       <-- ..................................................
EY913855       <-- ..................................................
FD941191       <-- ..................................................
EW716562       <-- ..................................................
EV537126       <-- CCACCTTCTCCGCTCAGAATACCACCCTGGACAGCGGCACCGTAAGCAA-
EW717803       <-- CCACCTTCTCCGCTCAGAATACCACCCTGAACAGCCGCACCGTAAGCAA-
EX890288       <-- CCACCTTCTCCGCTCAGAATACCACCCTGAACAGCCGCACCGTAAGCAAA
EX886765       <-- CCACCTTCTCCGCTCAGAATACCACCCTGAACAGCCGCACCGTA......
FD977944       --> ..................................................
EX890778       --> ..................................................
FD953794       --> ..................................................
EW721956       --> ..................................................
EV541427       --> ..................................................
FD528982       --> ..................................................
EW720483       --> ..................................................
EX893838       --> ..................................................
EY910020       --> ..................................................
FD528650       --> ..................................................
EV574192       --> ..................................................
FD554712       --> ..................................................
EX891079       --> ..................................................

               1001   -   1051
UN13940        --> CAGCTTCGTCGGGGGTTCACACCCTTGTTTGGCTCTTTCCCTTCGAAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX886371       <-- ..................................................
FD958277       <-- ..................................................
FD532089       <-- ..................................................
FD532550       <-- ..................................................
EY913855       <-- ..................................................
FD941191       <-- ..................................................
EW716562       <-- ..................................................
EV537126       <-- CGGCTTCGTCAGGG-TTCACACCCTTGTTTGGCTCTTTCCCTTCGAAGAA
EW717803       <-- CAGCTTCGTCGGGG-TTCACACCCTTGTTTGGCTCTTTCCCTTCGAAGAA
EX890288       <-- CAGCTTCGTCGGGGGTTCACACCCTTGTTTGGCTCTTTCCCTTCGAAGAA
EX886765       <-- ..................................................
FD977944       --> ..................................................
EX890778       --> ..................................................
FD953794       --> ..................................................
EW721956       --> ..................................................
EV541427       --> ..................................................
FD528982       --> ..................................................
EW720483       --> ..................................................
EX893838       --> ..................................................
EY910020       --> ..................................................
FD528650       --> ..................................................
EV574192       --> ..................................................
FD554712       --> ..................................................
EX891079       --> ..................................................

               1051   -   1101
UN13940        --> GTCCTTCAACAGCTGCTGAACCTTGGGGATTCTAGTACTTCCACCAACAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX886371       <-- ..................................................
FD958277       <-- ..................................................
FD532089       <-- ..................................................
FD532550       <-- ..................................................
EY913855       <-- ..................................................
FD941191       <-- ..................................................
EW716562       <-- ..................................................
EV537126       <-- GTCCTTCAACAGCTGCTGAACCTTTGGGATTCTAGTACc...........
EW717803       <-- GTCCTTCAACAGCTGCTGAACCTTGGGGATTCTAGTACTTCCACCAACAA
EX890288       <-- GTCCTTCAACAGCTGCTGAACCTTGGGGATTCTAGTACTTCCACCAACAA
EX886765       <-- ..................................................
FD977944       --> ..................................................
EX890778       --> ..................................................
FD953794       --> ..................................................
EW721956       --> ..................................................
EV541427       --> ..................................................
FD528982       --> ..................................................
EW720483       --> ..................................................
EX893838       --> ..................................................
EY910020       --> ..................................................
FD528650       --> ..................................................
EV574192       --> ..................................................
FD554712       --> ..................................................
EX891079       --> ..................................................

               1101   -   1151
UN13940        --> GGACAATCTCATCAATCTGACTCTTCTGTAGACCAGCATCATCCATGGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX886371       <-- ..................................................
FD958277       <-- ..................................................
FD532089       <-- ..................................................
FD532550       <-- ..................................................
EY913855       <-- ..................................................
FD941191       <-- ..................................................
EW716562       <-- ..................................................
EV537126       <-- ..................................................
EW717803       <-- GGACAATCTCATCAATCTGACTCTTCTGTAGACCAGCATCATCCATGGCC
EX890288       <-- GGACAATCTCATCAATCT................................
EX886765       <-- ..................................................
FD977944       --> ..................................................
EX890778       --> ..................................................
FD953794       --> ..................................................
EW721956       --> ..................................................
EV541427       --> ..................................................
FD528982       --> ..................................................
EW720483       --> ..................................................
EX893838       --> ..................................................
EY910020       --> ..................................................
FD528650       --> ..................................................
EV574192       --> ..................................................
FD554712       --> ..................................................
EX891079       --> ..................................................

               1151   -   1201
UN13940        --> TTCTTCACTGGTCCCATGGTCTTCCTGAACAAGTCGTTGTTAAGCTCCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX886371       <-- ..................................................
FD958277       <-- ..................................................
FD532089       <-- ..................................................
FD532550       <-- ..................................................
EY913855       <-- ..................................................
FD941191       <-- ..................................................
EW716562       <-- ..................................................
EV537126       <-- ..................................................
EW717803       <-- TTCTTCACTGGTCCCATGGTCTTCCTGAACAAGTCGTTGTTAAGCTCCTC
EX890288       <-- ..................................................
EX886765       <-- ..................................................
FD977944       --> ..................................................
EX890778       --> ..................................................
FD953794       --> ..................................................
EW721956       --> ..................................................
EV541427       --> ..................................................
FD528982       --> ..................................................
EW720483       --> ..................................................
EX893838       --> ..................................................
EY910020       --> ..................................................
FD528650       --> ..................................................
EV574192       --> ..................................................
FD554712       --> ..................................................
EX891079       --> ..................................................

               1201   -   1251
UN13940        --> AAAACGAGCTCTGGTGAGAGGCTCTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX886371       <-- ...........................
FD958277       <-- ...........................
FD532089       <-- ...........................
FD532550       <-- ...........................
EY913855       <-- ...........................
FD941191       <-- ...........................
EW716562       <-- ...........................
EV537126       <-- ...........................
EW717803       <-- AAAACGAGCTCTGGTGAGAGGCTCTGC
EX890288       <-- ...........................
EX886765       <-- ...........................
FD977944       --> ...........................
EX890778       --> ...........................
FD953794       --> ...........................
EW721956       --> ...........................
EV541427       --> ...........................
FD528982       --> ...........................
EW720483       --> ...........................
EX893838       --> ...........................
EY910020       --> ...........................
FD528650       --> ...........................
EV574192       --> ...........................
FD554712       --> ...........................
EX891079       --> ...........................