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Alignment for radish unigene UN13962

               -2     -     48
UN13962        --> ...GGAGAGTTGCATTGCACATACATACGTAGAGAGATTAAAAACAAACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD583704       <-- ...GGAGAGTTGCATTGCACATACATACGTAGAGAGATTAAAAACAAACG  Raphanus sativus cv Rat-Tail Radish #3870
FD977180       <-- ...GGAGAGTTGCATTGCACATACATACGTAGAGAGATTAAAAACAAACG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD529809       <-- ...............TGCACATACATACGTAGAGAGATTAAAAACAAACG  Raphanus raphanistrum subsp. maritimus
FD976511       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY901613       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD934840       <-- ..................................................  Raphanus sativus var. oleiformis
EW738368       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD934832       <-- ..................................................  Raphanus sativus var. oleiformis
FD579779       --> ...GGAGAGTTGCATTGCACATACATACGTAGAGAGATTAAAAACAAACG  Raphanus sativus cv Rat-Tail Radish #3870
FD981415       --> ...GGAGAGTTGCATTGCACATACATACGTAGAGAGATTAAAAACAAACG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD533687       --> gggtcAGAGTTGCATTGCACATACATACGTAGAGAGATTAAAAACAAACG  Raphanus raphanistrum subsp. maritimus
EY906626       --> .........ggGCATTGCACATACATACGTAGAGAGATTAAAAACAAACG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD543823       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY905102       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD938483       --> ..................................................  Raphanus sativus var. oleiformis
EW734534       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870

               48     -     98
UN13962        --> TACCGGGAATAGTAGAAAGAAGAACAAGAAAGAGATCGAAACAATGTCGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD583704       <-- TACCGGGAATAGTAGAAAGAAGAACAAGAAAGAGATCGAAACAATGTCGT  Raphanus sativus cv Rat-Tail Radish #3870
FD977180       <-- AACCGGGAATAGTAGAAAGAAGAACAAGAAAGAGATCGAAACAATGTCGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD529809       <-- TACCGGGAATAGTAGAAAGAAGAACAAGAAAGAGATCGAAACAATGTCGT  Raphanus raphanistrum subsp. maritimus
FD976511       <-- .........................AAGAAAGAGATCGAAAGAATGTCGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY901613       <-- ...............................GAGATCGAAACAATGTCGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD934840       <-- ...............................GAGATCGAAACAATGTCGT  Raphanus sativus var. oleiformis
EW738368       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD934832       <-- ..................................................  Raphanus sativus var. oleiformis
FD579779       --> TACCGGGAATAGTAGAAAGAAGAACAAGAAAGAGATCGAAACAATGTCGT  Raphanus sativus cv Rat-Tail Radish #3870
FD981415       --> AACCGGGAATAGTAGAAAGAAGAACAAGAAAGAGATCGAAACAATGTCGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD533687       --> TACCGGGAATAGTAGAAAGAAGAACAAGAAAGAGATCGAAACAATGTCGT  Raphanus raphanistrum subsp. maritimus
EY906626       --> AACCGGGAATAGCAGAAAGAAGAACAAGAAAGAGATCGAAAGAATGTCGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD543823       --> ........................gAAGAAAGAGATCGAAACAATGTCGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY905102       --> ...............................GAGATCGAAACAATGTCGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD938483       --> ...............................GAGATCGAAACAATGTCGT  Raphanus sativus var. oleiformis
EW734534       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870

               98     -    148
UN13962        --> GGCAAACTTACGTTGATGAGCACTTAATGTGCGATGTCGGTGACGGCCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD583704       <-- GGCAAACTTACGTTGACGAGCACTTAATGTGCGATGTCGGTGACGGCCAA
FD977180       <-- GGCAAACTTACGTTGATGAGCACTTAATGTGCGATGTCGGTGACGGCCAA
FD529809       <-- GGCAAACTTACGTTGATGAGCACTTAATGTGCGATGTCGGTGACGGCCAA
FD976511       <-- GGCAAACTTACGTTGATGAGCACTTAATGTGCGATGTCGGTGACGGCCAA
EY901613       <-- GGCAAACTTACGTTGATGAGCACTTAATGTGCGATGTCGATGACGGCCAA
FD934840       <-- GGCAAACTTACGTTGATGAGCACTTAATGTGCGATGTCGGTGACGGCCAA
EW738368       <-- ..................................................
FD934832       <-- ..................................................
FD579779       --> GGCAAACTTACGTTGACGAGCACTTAATGTGCGATGTCGGTGACGGCCAA
FD981415       --> GGCAAACTTACGTTGATGAGCACTTAATGTGCGATGTCGGTGACGGCCAA
FD533687       --> GGCAAACTTACGTTGATGAGCACTTAATGTGCGATGTCGGTGACGGCCAA
EY906626       --> GGCAAACTTACGTTGATGAGCACTTAATGTGCGATGTCGGTGACGGCCAA
FD543823       --> GGCAAACTTACGTTGATGAGCACTTAATGTGCGATGTCGGTGACGGCCAA
EY905102       --> GGCAAACTTACGTTGATGAGCACTTAATGTGCGATGTCGATGACGGCCAA
FD938483       --> GGCAAACTTACGTTGATGAGCACTTAATGTGCGATGTCGGTGACGGCCAA
EW734534       --> ..........................................ACGGCCAA

               148    -    198
UN13962        --> GGTCACCACCTCACC-GCTGCCGCCATCATCGGCCATGACGGTAGCGTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD583704       <-- GGTCACCACCTCACC-GCTGCCGCCATCATCGGCCATGACGGTAGCGTTT
FD977180       <-- GGTCACCACCTCACCCGCTGCCGCCATCATCGGCCATGACGGTAGCGTTT
FD529809       <-- GGTCACCACCTCACC-GCTTCCGCCATCATCGGCCATGACGGTAGCGTTT
FD976511       <-- GGTCACCACCTCACC-GCTGCCGCCATCATCGGCCATGACGGTAGCGTTT
EY901613       <-- GGTCACCACCTCACC-GCTGCCGCCATCATCGGCCATGTCGGTAGCGTTT
FD934840       <-- GGTCACCACCTCACC-GCTGCCGCCATCATCGGCCATGACGGTAGCGTTT
EW738368       <-- ................................GCCATGACGGTAGCGTTT
FD934832       <-- ..................................................
FD579779       --> GGTCACCACCTCACC-GCTGCCGCCATCATCGGCCATGACGGTAGCGTTT
FD981415       --> GGTCACCACCTCACC-GCTGCCGCCATCATCGGCCATGACGGTAGCGTTT
FD533687       --> GGTCACCACCTCACC-GCTTCCGCCATCATCGGCCATGACGGTAGCGTTT
EY906626       --> GGTCACCACCTCACC-GCTGCCGCCATCATCGGCCATGACGGTAGCGTTT
FD543823       --> GGTCACCACCTCACC-GCTGCCGCCATCATCGGTCATGACGGTAGCGTTT
EY905102       --> GGTCACCACCTCACC-GCTGCCGCCATCATCGGCCATGTCGGTAGCGTTT
FD938483       --> GGTCACCACCTCACC-GCTGCCGCCATCATCGGCCATGACGGTAGCGTTT
EW734534       --> GGTCACCACCTCACC-GCTGCCGCCATCGTCGGCCATGACGGTAGCGTTT

               198    -    248
UN13962        --> GGGCTCAGAGCGCTAATTTTCCTCAGTTCAAGCCTCAAGAGATGACAGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD583704       <-- GGGCTCAGAGCGCTAATTTTCCTCAGTTCAAGCCTCAAGAGATGACAGAT
FD977180       <-- GGGCTCAGAGCGCTAATTTTCCTCAGTTCAACCCTCAAGAGATGACAGAT
FD529809       <-- GGGCTCAGAGCGCTAATTTTCCTCAGTTCAAGCCTCAAGAGATGACAGGT
FD976511       <-- GGGCTCAGAGCGCTAATTTTCCTCAGTTCAAGCCTCAAGAGATGACAGAT
EY901613       <-- GGGCTCAGAGCGCTAATTTTCCTCAGTTCAAGCCTCAAGAGATGACAGAT
FD934840       <-- GGGCTCAGAGCGCTAATTTTCCTCAGTTCAAGCCTCAAGAGATGACAGAT
EW738368       <-- GGGCCCAGAGCGCTAATTTTCCTCAGTTCAACCCTCAAGAGATGACAGAT
FD934832       <-- ..................................................
FD579779       --> GGGCTCAGAGCGCTAATTTTCCTCAGTTCAAGCCTCAAGAGATGACAGAT
FD981415       --> GGGCTCAGAGCGCTAATTTTCCTCAGTTCAACCCTCAAGAGATGACAGAT
FD533687       --> GGGCTCAGAGCGCTAATTTTCCTCAGTTCAAGCCTCAAGAGATGACAGGT
EY906626       --> GGGCTCAGAGCGCTAATTTTCCTCAGTTCAAGCCTCAAGAGATGACAGAT
FD543823       --> GGGCTCAGAGCGCTAATTTTCCTCAGTTCAAGCCTCAAGAGATGACAGAT
EY905102       --> GGGCTCAGAGCGCTAATTTTCCTCAGTTCAAGCCTCAAGAGATGACAGAT
FD938483       --> GGGCTCAGAGCGCTAATTTTCCTCAGTTCAAGCCTCAAGAGATGACAGAT
EW734534       --> GGGCCCAGAGCGCTAATTTTCCTCAGTTCAACCCTCAAGAGATGACAGAT

               248    -    298
UN13962        --> ATCATGAAAGATTTCGATGAGCCGGGTCACCTTGCTCCCACTGGTATGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD583704       <-- ATCATGAAAGATTTCGATGAGCCGGGTCACCTTGCTCCCACTGGTATGTT
FD977180       <-- ATCATGAAAGATTTCGATGAGCCGGGTCACCTTGCTCCCACTGGTATGTT
FD529809       <-- ATCATGAAAGATTTCGATGAGCCGGGTCACCTTGCTCCCACTGGTATGTT
FD976511       <-- ATCATGAAAGATTTCGATGAGCCGGGTCACCTTGCTCCCACTGGTATGTT
EY901613       <-- ATCATGAAAGATTTCGATGAGCCGGGTCACCTTGCTCCCACTGGTATGTT
FD934840       <-- ATCATGAAAGATTTCGATGAGCCGGGTCACCTTGCTCCCACTGGTATGTT
EW738368       <-- ATCATGAAAGATTTTGATGAGCCGGGTCACCTTGCTCCCACTGGTATGTT
FD934832       <-- ..................................................
FD579779       --> ATCATGAAAGATTTCGATGAGCCGGGTCACCTTGCTCCCACTGGTATGTT
FD981415       --> ATCATGAAAGATTTCGATGAGCCGGGTCACCTTGCTCCCACTGGTATGTT
FD533687       --> ATCATGAAAGATTTCGATGAGCCGGGTCACCTTGCTCCCACTGGTATGTT
EY906626       --> ATCATGAAAGATTTCGATGAGCCGGGTCACCTTGCTCCCACTGGTATGTT
FD543823       --> ATCATGAAAGATTTCGATGAGCCGGGTCACCTTGCTCCCACTGGTATGTT
EY905102       --> ATCATGAAAGATTTCGATGAGCCGGGTCACCTTGCTCCCACTGGTATGTT
FD938483       --> ATCATGAAAGATTTCGATGAGCCGGGTCACCTTGCTCCCACTGGTATGTT
EW734534       --> ATCATGAAAGATTTCGATGAGCCGGGTCACCTTGCTCCCACTGGTATGTT

               298    -    348
UN13962        --> TCTTGCAGGACTAAAGTATATGGTCATCCAAGGCGAGCCTGGTGCAGTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD583704       <-- TCTTGCAGGACTAAAGTATATGGTCATCCAAGGCGAGCCTGGTGCAGTCA
FD977180       <-- TCTTGCAGGACTAAAGTATATGGTCATCCAAGGCGAGCCTGGTGCAGTCA
FD529809       <-- TCTTGCAGGACTAAAGTATATGGTCATCCAAGGCGAGCCTGGTGCAGTCA
FD976511       <-- TCTTGCAGGACTAAAGTATATGGTCACCCAAGGCGAGCCTGGTGCAGTCA
EY901613       <-- TCTTGCAGGACTAAAGTATATGGTCATCCAAGGCGAGCCTGGTGCAGTCA
FD934840       <-- TCTTGCAGGACTAAAGTATATGGTCATCCAAGGCGAGCCTGGTGCAGTCA
EW738368       <-- TTTTGCAGGACTAAAGTATATGGTCATCCAAGGCGAGCCTGGTGCAGTCA
FD934832       <-- ..................................................
FD579779       --> TCTTGCAGGACTAAAGTATATGGTCATCCAAGGCGAGCCTGGTGCAGTCA
FD981415       --> TCTTGCAGGACTAAAGTATATGGTCATCCAAGGCGAGCCTGGTGCAGTCA
FD533687       --> TCTTGCAGGACTAAAGTATATGGTCATCCAAGGCGAGCCTGGTGCAGTCA
EY906626       --> -C-TGCA-GACTAAAGTATATGGTCATCCAAG-CGAGC-TGGTGCA-TCA
FD543823       --> TCTTGCAGGACTAAAGTATATGGTCATCCAAGGCGAGCCTGGTGCAGTCA
EY905102       --> TCTTGCAGGACTAAAGTATATGGTCATCCAAGGCGAGCCTGGTGCAGTCA
FD938483       --> TCTTGCAGGACTAAAGTATATGGTCATCCAAGGCGAGCCTGGTGCAGTCA
EW734534       --> TCTTGCAGGACTAAAGTATATGGTCATCCAAGGCGAGCCTGGTGCAGTCA

               348    -    398
UN13962        --> TCCGTGGCAAGAAGGGAGCTGGAGGAATAACGATCAAGAAAACAGGACAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD583704       <-- TCCGTGGCAAGAAGGGAGCTGGAGGAATAACGATCAAGAAAACAGGACAA
FD977180       <-- TCCGTGGCAAGAAGGGAGCTGGAGGAATAACGATCAAGAAAACAGGACAA
FD529809       <-- TCCGTGGCAAGAAGGGAGCTGGAGGAATAACGATCAAGAAAACAGGACAA
FD976511       <-- TCCGTGGCAAGAAGGGAGCTGGAGGAATAACGATCAAGAAAACAGGACAA
EY901613       <-- TCCGTGGCAGGAAGGGAGCTGGAGGAATAACGATCAAGTAAACAGGACAA
FD934840       <-- TCCGTGGCAAGAAGGGAGCTGGAGGAATAACGATCAAGAAAACAGGACAA
EW738368       <-- TCCGTGGCAAGAAGGGAGCTGGAGGAATAACGATCAAGAAAACAGGACAA
FD934832       <-- ..............GGAGCTGGAGGAATAACGATCAAGAAAACAGGACAA
FD579779       --> TCCGTGGCAAGAAGGGAGCTGGAGGAATAACGATCAAGAAAACAGGACAA
FD981415       --> TCCGTGGCAAGAAGGGAGCTGGAGGAATAACGATCAAGAAAACAGGACAA
FD533687       --> TCCGTGGCAAGAAGGGAGCTGGAGGAATAACGATCAAGAAAACAGGACAA
EY906626       --> TCCGTGGCAAagga....................................
FD543823       --> TCCGTGGCAAGAAGGGAGCTGGAGGAATAACGATCAAGAAAACAGGACAA
EY905102       --> TCCGTGGCAGGAAGGGAGCTGGAGGAATAACGATCAAGTAAACAGGACAA
FD938483       --> TCCGTGGCAAGAAGGGAGCTGGAGGAATAACGATCAAGAAAACAGGACAA
EW734534       --> TCCGTGGCAAGAAGGGAGCTGGAGGAATAACGATCAAGAAAACAGGACAA

               398    -    448
UN13962        --> TCAATGGTGTTTGGTTTGTACGAAGAACCGGTGACTCCAGGACAATGTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD583704       <-- TCAATGGTGTTTGGTTTGTACGAAGAACCGGTGACTCCAGGACAATGTAA
FD977180       <-- TCAATGGTGTTTGGTTTGTACGAAGAACCGGTGACTCCAGGACAATGTAA
FD529809       <-- TCAATGGTGTTTGGTTTGTACGAAGAACCGGTGACTCCAGGACAATGTAA
FD976511       <-- TCAATGGTGTTTGGTTTGTACGAAGAATCGGTGACTCCAGGACAATGTAA
EY901613       <-- TCAATGGTGTTTGGTTTGTACGAAGAACCGGTGACTCCAGGACAATGTAA
FD934840       <-- TCAATGGTGTTTGGTTTGTACGAAGAACCGGTGACTCCAGGACAATGTAA
EW738368       <-- TCAATGGTGTTTGGTTTGTACGAAGAACCGGTGACTCCAGGACAATGTAA
FD934832       <-- TCAATGGTGTTTGGTTTGTATGAAGAACCGGTGACTCCAGGACAATGTAA
FD579779       --> TCAATGGTGTTTGGTTTGTACGAAGAACCGGTGACTCCAGGACAATGTAA
FD981415       --> TCAATGGTGTTTGGTTTGTACGAAGAACCGGTGACTCCAGGACAATGTAA
FD533687       --> TCAATGGTGTTTGGTTTGTACGAAGAACCGGTGACTCCAGGACAATGTAA
EY906626       --> ..................................................
FD543823       --> TCAATGGTGTTTGGTTTGTACGAAGAACCGGTGACTCCAGGACAATGTAA
EY905102       --> TCAATGGTGTTTGGTTTGTACGAAGAACCGGTGACTCCAGGACAATGTAA
FD938483       --> TCAATGGTGTTTGGTTTGTACGAAGAACCGGTGACTCCAGGACAATGTAA
EW734534       --> TCAATGGTGTTTGGTTTGTACGAAGAACCGGTGACTCCAGGACAATGTAA

               448    -    498
UN13962        --> CATGGTCGTCGAGAGGTTGGGTGATTACTTGATCGAACAGGACCTCTGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD583704       <-- CATGGTCGTCGAGAGGTTGGGTGATTACTTGATCGAACAGGACCTTTGAG
FD977180       <-- CATGGTCGTCGAGAGGTTGGGTGATTACTTGATCGAACAGGACCTCTGAG
FD529809       <-- CATGGTCGTCGAGAGGTTGGGTGATTACTTGATCGAACAGGACCTTTGAG
FD976511       <-- CATGGTCGTCGAGAGGTTGGGTGATTACTTGATCGAACAGGACCTTTGAG
EY901613       <-- CATGGTCGTCGAGAGGTTGGGTGATTACTTGATCGAACAGGACCTCTGAG
FD934840       <-- CATGGCCGTCGAGAGGTTGGGTGATTACTTGATCGAACAGGACCTCTTAG
EW738368       <-- CATGGTCGTCGAGAGGTTGGGTGATTACTTGATCGAACAGGACCTTTGAG
FD934832       <-- CATGGCCGTCGAGAGGTTGGGTGATTACTTGATCGAACAGGACCTTTTAG
FD579779       --> CATGGTCGTCGAGAGGTTGGGTGATTACTTGATCGAACAGGACCTCTGAG
FD981415       --> CATGGTCGTCGAGAGGTTGGGTGATTACTTGATCGAACAGGACCTCTGAG
FD533687       --> CATGGTCGTCGAGAGGTTGGGTGATTACTTGATCGAACAGGACCTCTGAG
EY906626       --> ..................................................
FD543823       --> CATGGTCGTCGAGAGGTTGGGTGATTACTTGATCGAACAGGACCTCTGAG
EY905102       --> CATGGTCGTCGAGAGGTTGGGTGATTACTTGATCGAACAGGACCTCTGAG
FD938483       --> CATGGCCGTCGAGAGGTTGGGTGATTACTTGATCGAACAGGACCTCTTAG
EW734534       --> CATGGTCGTCGAGAGGTTGGGTGATTACTTGATCGAACAGGACCTCTGAG

               498    -    548
UN13962        --> CTTTCTAGAATGCTCCATTGCTGTTATTCAAATCCTTTAAACTATTGTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD583704       <-- CTTTCTAGAATGCTCCATTGCTGTTATTCAAATCCTTTAAACTATTGTTT
FD977180       <-- CTTTCTAGAATGCTCCATTGCTGTTATTCAAATCCTTTAAACTATTGTTT
FD529809       <-- CTTTCTAGAATGCTCCATTGCTGTTATTCAAATCCTTTAAACTATTGTTT
FD976511       <-- CTTTCTAGAATGCTCCATTGCTGTTATTCAAATCCTTTAAACTATTGTTT
EY901613       <-- CTTTCTAGAATGCTCCATTGCTGTTATTCAAATCCTTTAAACTATTGTTT
FD934840       <-- CTTTCTAGAATGCTCCATTGCTGTTATTCAAATCCTTTAAACTATTGTTT
EW738368       <-- CTTTTTAGAATGCTCCATTGCTGTTATTCAAATCCTTTAAACTATTGTTT
FD934832       <-- CTTTTTAGAATGCTCCATTGCTGTTATTCAAATCCTTTAAACTATTGTTT
FD579779       --> CTTTCTAGAATGCTCCATTGCTGTTATTCAAATCCTTTAAACTATTGTTT
FD981415       --> CTTTCTAGAATGCTCCATTGCTGTTATTCAAATCCTTTAAACTATTGTTT
FD533687       --> CTTTCTAGAATGCTCCATTGCTGTTATTCAAATCCTTTAAACTATTGTTT
EY906626       --> ..................................................
FD543823       --> CTTTCTAGAATGCTCCATTGCTGTTATTCAAATCCTTTAAACTATTGTTT
EY905102       --> CTTTCTAGAATGCTCCATTGCTGTTATTCAAATCCTTTAAACTATTGTTT
FD938483       --> CTTTCTAGAATGCTCCATTGCTGTTATTCAAATCCTTTAAACTATTGTTT
EW734534       --> CTTTCTAGAATGCTCCATTGCTGTTATTCAAATCCTTTAAACTATTGTTT

               548    -    598
UN13962        --> CACCTTTGTTTTTCTTTTGGTTGGGTGCATGGGTTTCTTTTTTTTTACTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD583704       <-- CACCTTTGTTTTTCCTTTGGTTGGGTGCATGGGTTTCTTTTTTTT-ACTA
FD977180       <-- CACCTTTGTTTTTCTTTTGGTTGGGTGCATGGGTTTCTTTTTTTTTACTA
FD529809       <-- CACCTTTGTTTTTTTTTTGGTTGGGTGCATGGGTTTCTTTTTTTTTACTA
FD976511       <-- CACCTTTGTTTTTCTTTTGGTTGGGTGCATGGGTTTCTTTTTTTTTACTA
EY901613       <-- CACCTTTGTTTTTCTTTTGGTTGGGTGCATGGGTTTCTTTTTTTTTACTA
FD934840       <-- CACCTTTGTTTTTCTTTTGGTTGGGTGCATGGGTTTCTTTTTTTTTACTA
EW738368       <-- CACCTTTGTTTTTTTTTTGGTTGGGTGCATGGGTT--TTTTTTTTTACTA
FD934832       <-- CACCTTTGTT........................................
FD579779       --> CACCTTTGTTTTTCCTTTGGTTGGGTGCATGGGTTTCTTTTTTTT-ACTA
FD981415       --> CACCTTTGTTTTTCTTTTGGTTGGGTGCATGGGTTTCTTTTTTTTTACTA
FD533687       --> CACCTTTGTTTTTCTTTTGGTTGGGTGCATGGGTTTCTTTTTTTTTACTA
EY906626       --> ..................................................
FD543823       --> CACCTTTGTTTTTCTTTTGGTTGGGTGCATGGGTTTCTTTTTTTTTACTA
EY905102       --> CACCTTTGTTTTTCTTTTGGTTGGGTGCATGGGTTTCTTTTTTTTTACTA
FD938483       --> CACCTTTGTTTTTCTTTTGGTTGGGTGCATGGGTTTCTTTTTTTTTACTA
EW734534       --> CACCTTTGTTTTTCTTTTGGTTGGGTGCATGGGTTTCTTGTTTT--ACTA

               598    -    648
UN13962        --> ATTTAATTTTGGTATTTCTGGTTTCTACTTAGCAAAGTTTAAAACAAGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD583704       <-- ATTTAATTTTGGTATTTCTGGTTTCTACTTAACAAAGTTTAAAACAAGCC  Raphanus sativus cv Rat-Tail Radish #3870
FD977180       <-- ATTTAATTTTGGTATTTCTGGTTTCTACTTAGCAAAGTTTAAAACAAACC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD529809       <-- ATTTAATTTTGGTATTTCTGGTTTCTACTTAACAAAGTTTAAAACAAGCC  Raphanus raphanistrum subsp. maritimus
FD976511       <-- ATTTAATTTTGGTATTTCTGGTTTCTACTTAGCAAAGTTTAAAACAAGCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY901613       <-- ATTTAATTTTGGTATTTCTGGTTTCTACTTAGCAAAGTTTAAAACAAGCC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD934840       <-- ATTTAATTTTGGTATTTCTGGTTTCTACTTAACAAAGTTTAAAACAAGCC  Raphanus sativus var. oleiformis
EW738368       <-- ATTTAATTTTGGTATTTTTGGTTTTTACTTAGCAAAGTTTAAAACAAGCC  Raphanus sativus cv Rat-Tail Radish #3870
FD934832       <-- ..................................................  Raphanus sativus var. oleiformis
FD579779       --> ATTTAATTTTGGTATTTCTGGTTTCTACTTAACAAAGTTTAAAACAAGCC  Raphanus sativus cv Rat-Tail Radish #3870
FD981415       --> ATTTAATTTTGGTATTTCTGGTTTCTACTTAGCAAAGTTTAAAACAAACC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD533687       --> ATTTAATTTTGGTATTTCTGGTTTCTACTTAACAAAGTTTAAAACAAGCC  Raphanus raphanistrum subsp. maritimus
EY906626       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD543823       --> ATTTAATTTTGGTATTTCTGGTTTCTACTTAGCAAAGTTTAAAACAAGCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY905102       --> ATTTAATTTTGGTATTTCTGGTTTCTACTTAGCAAAGTTTAAAACAAGCC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD938483       --> ATTTAATTTTGGTATTTCTGGTTTCTACTTAACAAAGTTTAAAACAAGCC  Raphanus sativus var. oleiformis
EW734534       --> ATTTAATTTTGGTATTTCTGGTTTCTACTTAGCAAAGTTTAAAACAAGCC  Raphanus sativus cv Rat-Tail Radish #3870

               648    -    698
UN13962        --> TAAGGTTGCAGATAATAACACAAAAGAAGAAACCTTCATCTTTTTCTTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD583704       <-- TAAGGTTGCAGATAATAACACAAAAGAAGAAACCTTCATCgcg.......
FD977180       <-- TAAGGTTGCAGATAATAACACAAAAGAAGAAACCTTCATCTTTTTCTTGT
FD529809       <-- TAAGGTTGCAGATAATAACACAAAAGAAGAAACCTTCATCTTTTTCTTGT
FD976511       <-- TAAGGTTGCAGATAATAACACAAAAGAAGAAACCTTCATCTTTTTCTTGT
EY901613       <-- TAAGGTTGCAG.......................................
FD934840       <-- TAAGGTTGCAGATAATAACACAAAAGAAGAAACCTTCATCc.........
EW738368       <-- TAAGGTTGCAGATAATAACACAAAAGAAGAAACCTTCATTTTTTTCTTGT
FD934832       <-- ..................................................
FD579779       --> TAAGGTTGCAGATAATAACACAAAAGAAGAAACCTTCATCgcgaaaaaaa
FD981415       --> TAAAGTTGCAGATAATAACACAAAAGAAGAAACCTTCATCTTTTTCTTGT
FD533687       --> TAAAGTTGCAGATAATAACACAAA..........................
EY906626       --> ..................................................
FD543823       --> TAAGGTTGCAGATAATAACACAAAAGAAGAAACCTTCATCTTTTTCTTGT
EY905102       --> TAAGGTTGCAGAaa....................................
FD938483       --> TAAGGTTGCAGATAATAACACAAAAGAAGAAACCTTCATCc.........
EW734534       --> TAAAGTTGCAGATAATAACACA............................

               698    -    748
UN13962        --> TTTTTT--CATTAATTTTTTT-ATTTTTATTTAATTTTATTTACATTAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD583704       <-- ..................................................
FD977180       <-- TTTTTT-TCATTAATTTTTTTTATTTTTATTTAATTTTATTTACATTAAG
FD529809       <-- TTTTTTTTCATTAATTTTTT--ATTTTTATTTAATTTTATTTACATTAAG
FD976511       <-- TTTTT---CATTAATTTTTTT-ATTTTTATTTAATTTTATTTACATTAAG
EY901613       <-- ..................................................
FD934840       <-- ..................................................
EW738368       <-- TTTTTT-TCATTAATTTTTTTTATTTTTATTTAATTTTATTTACATTAAG
FD934832       <-- ..................................................
FD579779       --> aa................................................
FD981415       --> TTTTTT--CATTAATTTTTTT-ATTTT-ATTTAATTT-ATTTACATTAAG
FD533687       --> ..................................................
EY906626       --> ..................................................
FD543823       --> TTTTTT--CATTAATTTTTTA-ATTT........................
EY905102       --> ..................................................
FD938483       --> ..................................................
EW734534       --> ..................................................

               748    -    798
UN13962        --> GGCATTTTAATTCTATTACTACGTATTATCTTTTTAAATCTTATTAAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD583704       <-- ..................................................
FD977180       <-- GGCATTTTAATTCTATT.................................
FD529809       <-- cgc...............................................
FD976511       <-- TGCATTTTAATTCTATTACTACGTATTATCTTTTTAAATCTTATTAAACA
EY901613       <-- ..................................................
FD934840       <-- ..................................................
EW738368       <-- GGCATTTTAATTTTATT.................................
FD934832       <-- ..................................................
FD579779       --> ..................................................
FD981415       --> Gcatt.............................................
FD533687       --> ..................................................
EY906626       --> ..................................................
FD543823       --> ..................................................
EY905102       --> ..................................................
FD938483       --> ..................................................
EW734534       --> ..................................................

               798    -    848
UN13962        --> TATACAGCCATTTATATGTACTAATATTATATATTAAGAAACTTTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD583704       <-- ...............................................
FD977180       <-- ...............................................
FD529809       <-- ...............................................
FD976511       <-- TATACAGCCATTTATATGTACTAATATTATATATTAAGAAACTTTTG
EY901613       <-- ...............................................
FD934840       <-- ...............................................
EW738368       <-- ...............................................
FD934832       <-- ...............................................
FD579779       --> ...............................................
FD981415       --> ...............................................
FD533687       --> ...............................................
EY906626       --> ...............................................
FD543823       --> ...............................................
EY905102       --> ...............................................
FD938483       --> ...............................................
EW734534       --> ...............................................