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Alignment for radish unigene UN13968

               1      -     51
UN13968        --> GGCTCTCTCTCTCTGTCTCGCTTCCTCTCTCTTTACGTTGGTTGGATCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959167       <-- ..................................................
FD538713       <-- ..................................................
FD958878       <-- ..................................................
FD937286       <-- ..................................................
FD959094       <-- ..................................................
FD936747       <-- ..................................................
EX767084       <-- ..................................................
FD580001       --> GGCTCTCTCTCTCTGTCTCGCTTCCTTTCTCTTTACGTTGGTTGGATCGA
FD962297       --> ..............ggaTCGCTTCCTCTCTCTTTACGTTGGTTGGATCGA
FD962669       --> ..............ggaTCGCTTCCTCTCTCTTTACGTTGGTTGGATCGA
FD941701       --> ..............................................gCGA
EX762917       --> ..................................................
FD550924       --> ..................................................
EV536626       --> ..................................................
FD962575       --> ..................................................
FD542715       --> ..................................................
EY930938       --> ..................................................

               51     -    101
UN13968        --> AAAAAATGGCGGAAGAATCGGAGAAACCTGTGCACACGGAAGAGTCTCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959167       <-- ..................................................
FD538713       <-- ..................................................
FD958878       <-- ..................................................
FD937286       <-- ..................................................
FD959094       <-- ..................................................
FD936747       <-- ..................................................
EX767084       <-- ..................................................
FD580001       --> AAAAAATGGCGGAAGAATCGGAGAAACCTGTGCACACGGAAGAGTCTCTG
FD962297       --> AAAAAATGGCGGAAGAATCGGAGAAACCTGTGCACACGGAAGAGTCTCTG
FD962669       --> AAAAAATGGCGGAAGAATCGGAGAAACCTGTGCACACGGAAGAGTCTCTG
FD941701       --> AAAAAATGGCGGAAGAATCGGAGAAACCTGTGCACACGGAAGAGTCTCTG
EX762917       --> .................ggGGAGAAACCCGTGGCGACCGAAGAGTCTCTG
FD550924       --> .........................................GAGTCTCTG
EV536626       --> ...............................................CTG
FD962575       --> ..................................................
FD542715       --> ..................................................
EY930938       --> ..................................................

               101    -    151
UN13968        --> ATGGAGAAGATAGCTGAGAAGATCCACGATCACGATTCATCATCGTCGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959167       <-- ..................................................
FD538713       <-- ..................................................
FD958878       <-- ..................................................
FD937286       <-- ..................................................
FD959094       <-- ..................................................
FD936747       <-- ..................................................
EX767084       <-- ..................................................
FD580001       --> ATGGAGAAGATAGCTGAGAAGATCCACGATCACGATTCATCATCGTCGTC
FD962297       --> ATGGAGAAAATAGCTGAGAAGATCCACGATCACGATTCATCATCGTCGTC
FD962669       --> ATGGAGAAAATAGCTGAGAAGATCCACGATCACGATTCATCATCGTCGTC
FD941701       --> ATGGAGAAGATAGCTGAGAAGATCCACGATCACGATTCATCATCGTCGTC
EX762917       --> ATGGAGAAGATAGCTGAGAAGATCCACGATCACGATTCATCATCGTCGTC
FD550924       --> ATGGAGAAGATAGCTGAGAAGATCCACGATCACGATTCATCATCGTCATC
EV536626       --> ATGGAGAAGATAGCTGAGAAGATCCACGATCACGATTCATCATCGTCGTC
FD962575       --> ..........................gGATCACGATTCATCATCGTCGTC
FD542715       --> ................................gGATTCATCATCGTCGTC
EY930938       --> ..................................................

               151    -    201
UN13968        --> GGACTCGGAGCACGAGAAACCGGAGTCTCCGTCGGCTTTGAAGGCGAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959167       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD538713       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD958878       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD937286       <-- ..................................................  Raphanus sativus var. oleiformis
FD959094       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD936747       <-- ..................................................  Raphanus sativus var. oleiformis
EX767084       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD580001       --> GGACTCGGAGCACGAGAAACCGGAGTCTCCGTCGGCTTTGAAGTCGAAGA  Raphanus sativus cv Rat-Tail Radish #3870
FD962297       --> GGACTCGGAGCACGAGCAACCGGAGTCTCCGTCGGCTTTGAAGGCGAAGA  Raphanus raphanistrum subsp. maritimus
FD962669       --> GGACTCGGAGCACGAGCAACCGGAGTCTCCGTCGGCTTTGAAGGCGAAGA  Raphanus raphanistrum subsp. maritimus
FD941701       --> GGACTCGGAGCACGAGAAACCGGAGTCTCCGTCGGCTTTGAAGGCGAAGA  Raphanus sativus var. oleiformis
EX762917       --> GGACTCGGAGCACGAGAAACCGGAGTCTCCGTCGGCTTTGAAGG--AAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD550924       --> GGACTCGGAGCACGAGAAACCGGAGTCTCCGTCGGCTTTGAAGTCGAAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV536626       --> GGACTCGGAGCACGAGAAACCGGAGTCTCCGTCGGTTTTGAATTCGAAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD962575       --> GGACTCGGAGCACGAGAAACCGGAGTCTCCGTCGGCTTTGAAGGCGAAGA  Raphanus raphanistrum subsp. maritimus
FD542715       --> GGACTCGGAGCACGAGAAACCGGAGTCTCCGTCGGCTTTGAAGTCGAAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY930938       --> ..................................................  Raphanus sativus var. oleiformis

               201    -    251
UN13968        --> TATACCGTTTGTTTGGTAGAGAGAAGCCTGTTCACAAGGTCCTCGGCGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959167       <-- ................................CACAAGGTCCTCGGCGGT  Raphanus raphanistrum subsp. maritimus
FD538713       <-- .................................ACAAGGTTCTCGGCGGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD958878       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD937286       <-- ..................................................  Raphanus sativus var. oleiformis
FD959094       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD936747       <-- ..................................................  Raphanus sativus var. oleiformis
EX767084       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD580001       --> TATACCGTTTGTTTGGTAGAGAGAAGCCTGTTCACAAGGTCCTCGGCGGT  Raphanus sativus cv Rat-Tail Radish #3870
FD962297       --> TATACCGTTTGTTTGGTAGAGAGAAGCCTGTTCACAAGGTCCTCGGCGGT  Raphanus raphanistrum subsp. maritimus
FD962669       --> TATACCGTTTGTTTGGTAGAGAGAAGCCTGTTCACAAGGTCCTCGGCGGT  Raphanus raphanistrum subsp. maritimus
FD941701       --> TATAC-GTTTGTTTGGTAGAGA--AGCCTGTTCACAAGGTCCTCGGCGGT  Raphanus sativus var. oleiformis
EX762917       --> TATACCGTTTGTTTGGTAGAGAGAAGCCTGTTCACAAGGTTCTCGGCGGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD550924       --> TATACCGTTTGTTTGGTAGAGAGAAGCCTGTTCACAAGGTTCTCGGCGGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV536626       --> TATACCGTTTGTTTGGTAGGGAGAAGCCTGTTCACAAGGTTCTCGGCGGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD962575       --> TATACCGTTTGTTTGGTAGAGAGAAGCCTGTTCACAAGGTCCTCGGCGGT  Raphanus raphanistrum subsp. maritimus
FD542715       --> TATACCGTTTGTTTGGTAGGGAGAAGCCTGTTCACAAGGTTCTCGGCGGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY930938       --> ..................................................  Raphanus sativus var. oleiformis

               251    -    301
UN13968        --> GGCTTGCCCGCTGATGTGTTCTTGTGGAGGGACAAAAAGCTCTCAGCCGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959167       <-- GGCTTGCCCGCTGATGTGTTCTTGTGGAGGGACAAAAAGCTCTCAGCCGC
FD538713       <-- GGCTTGCCCGCTGATGTGTTCTTGTGGAGGGACAAAAAGCTCTCAGCCGC
FD958878       <-- ..................................................
FD937286       <-- ..................................................
FD959094       <-- ..................................................
FD936747       <-- ..................................................
EX767084       <-- ..................................................
FD580001       --> GGCTTGCCTGCTGATGTGTTCTTGTGGAGGGACAAGAAGCTCTCAGCCGC
FD962297       --> GGCTTGCCCGCTGATGTGTTCTTGTGGAGGGACAAAAAGCTCTCAGCCGC
FD962669       --> GGCTTGCCCGCTGATGTGTTCTTGTGGAGGGACAAAAAGCTCTCAGCCGC
FD941701       --> GGCTTGCCTGCTGATGTGTTCTTGTGGAGGGACAAGAAGCTCTCAGCCGC
EX762917       --> GGCTTGCCCGCTGATGTGTTCTTGTGGAGGGACAAAAAGCTCTCAGCCGC
FD550924       --> GGCTTGCCCGCTGATGTGTTCTTGTGGAGGGACAAAAAGCTCTCAGCCGC
EV536626       --> GGCTTGCCCGCTGATGTGTTCTTGTGGAGGGACAAAAAGCTCTCAGCCGC
FD962575       --> GGCTTGCCCGCTGATGTGTTCTTGTGGAGGGACAAAAAGCTCTCAGCCGC
FD542715       --> GGCTTGCCCGCTGATGTGTTCTTGTGGAGGGACAAAAAGCTCTCAGCCGC
EY930938       --> ..................................................

               301    -    351
UN13968        --> TGTTCTTGGTGTAGCGACTGCCATTTGGGTCCTGTTCGAGTTGGTTGAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959167       <-- TGTTCTTGGTGTAGCGACTGCCATTTGGGTCCTGTTCGAGTTGGTTGAGT  Raphanus raphanistrum subsp. maritimus
FD538713       <-- TGTTCTCGGTGTAGCGACTGCCATATGGGTTCTGTTCGAGTTGGTTGAGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD958878       <-- .....TTGGTGTAGCGACTGCCATTTGGGTCCTGTTCGAGTTGGTTGAGT  Raphanus raphanistrum subsp. maritimus
FD937286       <-- .....................................GAGTTGGTTGAGT  Raphanus sativus var. oleiformis
FD959094       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD936747       <-- ..................................................  Raphanus sativus var. oleiformis
EX767084       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD580001       --> TGTTCTTGGTGTAGCGACTGCCATATGGGTCCTGTTCGAGTTGGTTGAGT  Raphanus sativus cv Rat-Tail Radish #3870
FD962297       --> TGTTCTTGGTGTAGCGACTGCCATTTGGGTCCTGTTCGAGTTGGTTGAGT  Raphanus raphanistrum subsp. maritimus
FD962669       --> TGTTCTTGGTGTAGCGACTGCCATTTGGGTCCTGTTCGAGTTGGTTGAGT  Raphanus raphanistrum subsp. maritimus
FD941701       --> TGTTCTTGGTGTAGCGACTGCCATTTGGGTCCTGTTCGAGTTGGTTGAGT  Raphanus sativus var. oleiformis
EX762917       --> TGTTCTCGGTGTAGCGACTGCCATATGGGTTCTGTTCGAGTTGGTTGAGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD550924       --> TGTTCTCGGTGTAGCGACTGCCATATGGGTTCTGTTCGAGTTGGTTGAGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV536626       --> TGTTCTCGGTGTAACGACTGCCATATGGGTTCTGTTCGAGTTGGTTGAGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD962575       --> TGTTCTTGGTGTAGCGACTGCCATTTGGGTCCTGTTCGAGTTGGTTGAGT  Raphanus raphanistrum subsp. maritimus
FD542715       --> TGTTCTCGGTGTAGCGACTGCCATATGGGTTCTGTTCGAGTTGGTTGAGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY930938       --> ..................................................  Raphanus sativus var. oleiformis

               351    -    401
UN13968        --> ATCATTTGTTGAGTCTTGCGTGTCACATTTTGATATTCTCCCTCGCTGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959167       <-- ATCATTTGTTGAGTCTTGCGGGTCACATTTTGATATTCTCACTCGCTGCC  Raphanus raphanistrum subsp. maritimus
FD538713       <-- ATCATTTGTTGAGTCTTGCGTGTCACATTTTGATATTCTCCCTCGCTGCC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD958878       <-- ATCATTTGTTGAGTCTTGCGGGTCACATTTTGATATTCTCACTCGCTGCC  Raphanus raphanistrum subsp. maritimus
FD937286       <-- ATCATTTGTTGAGTCTTGCGTGTCACATTTTGATATTCTCCCTCGCTGCC  Raphanus sativus var. oleiformis
FD959094       <-- ....TTTGTTGAGTCTTGCGGGTCACATTTTGATATTCTCACTCGCTGCC  Raphanus raphanistrum subsp. maritimus
FD936747       <-- ..................................................  Raphanus sativus var. oleiformis
EX767084       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD580001       --> ATCATTTGTTGAGTCTTGCGTGTCACATTTTGATATTCTCCCTCGCTGCC  Raphanus sativus cv Rat-Tail Radish #3870
FD962297       --> ATCATTTGTTGAGTCTTGCGGGTCACATTTTGATATTCTCACTCGCTGCC  Raphanus raphanistrum subsp. maritimus
FD962669       --> ATCATTTGTTGAGTCTTGCGGGTCACATTTTGATATTCTCACTCGCTGCC  Raphanus raphanistrum subsp. maritimus
FD941701       --> ATCATTTGTTGAGTCTTGCGTGTCACATTTTGATATTCTCCCTCGCTGCC  Raphanus sativus var. oleiformis
EX762917       --> ATCATTTGTTGAGTCTTGCGTGTCACATTTTGATATTCTCCCTCGCTGCC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD550924       --> ATCATTTGTTGAGTCTTGCGTGTCACATTTTGATATTCTCCCTCGCTGCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV536626       --> ATCATTTGTTGAGTCTTGCGTGTCACATTTTGATATTCTCCCTCGCTGCC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD962575       --> ATCATTTGTTGAGTCTTGCGGGTCACATTTTGATATTCTCACTCGCTGCC  Raphanus raphanistrum subsp. maritimus
FD542715       --> ATCATTTGTTGAGTCTTGCGTGTCACATTTTGATATTCTCCCTCGCTGCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY930938       --> ..................................................  Raphanus sativus var. oleiformis

               401    -    451
UN13968        --> ATGTTTTTGTGGTCTAATGCTCATGCCTTTATGAAAAAGCCTCCACCTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959167       <-- ATGTTTTTGTGGTCTAATGCTCACGCCTTTATGAAAAAGCCTCCACCTAA  Raphanus raphanistrum subsp. maritimus
FD538713       <-- ATGTTTTTGTGGTCTAATGCTCATGCCTTTATGAAAAAGCCTCCACCTAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD958878       <-- ATGTTTTTGTGGTCTAATGCTCACGCCTTTATGAAAAAGCCTCCACCTAA  Raphanus raphanistrum subsp. maritimus
FD937286       <-- ATGTTTTTGTGGTCTAATGCTCATGCCTTTATGAAAAAGCCTCCACCTAA  Raphanus sativus var. oleiformis
FD959094       <-- ATGTTTTTGTGGTCTAATGCTCACGCCTTTATGAAAAAGCCTCCACCTAA  Raphanus raphanistrum subsp. maritimus
FD936747       <-- ..................................................  Raphanus sativus var. oleiformis
EX767084       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD580001       --> ATGTTTTTGTGGTCTAATGCTCATGCCTTTATGAAAAAGCCTCCACCTAA  Raphanus sativus cv Rat-Tail Radish #3870
FD962297       --> ATGTTTTTGTGGTCTAATGCTCACGCCTTTATGAAAAA............  Raphanus raphanistrum subsp. maritimus
FD962669       --> ATGTTTTTGTGGTCTAATGCTCACGCCTTTATGAAAAAGCCTCCACCTAA  Raphanus raphanistrum subsp. maritimus
FD941701       --> ATGTTTTTGTGGTCTAATGCTCATGCCTTTATGAAAAAGCCTCCACCTAA  Raphanus sativus var. oleiformis
EX762917       --> ATGTTTTTGTGGTCTAATGCTCATGCCTTTATGAAAAAGCCTCCACCTAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD550924       --> ATGTTTTTGTGGTCTAATGCTCATGCCTTTATGAAAAAGCCTCCACCTAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV536626       --> ATTTTTTTGTGGTCTAATGCTCATGCCTTTATGAAAAAGCCTCCACCTAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD962575       --> ATGTTTTTGTGGTCTAATGCTCACGCCTTTATGAAAAAGCCTCCACCTAA  Raphanus raphanistrum subsp. maritimus
FD542715       --> ATGTTTTTGTGGTCTAATGCTCATGCCTTTATGAAAAAGCCTCCACCTAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY930938       --> ...TTTTTGTGGTCTAATGCTCATGCCTTTATGAAAAAGCCTCCACCTAA  Raphanus sativus var. oleiformis

               451    -    501
UN13968        --> AATTCCTGAGATCCATGTTAAAGAGGAACACTTCCTTTTGATTGCTTCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959167       <-- AATTCCTGAGATCCATGTTAAAGAGGAACACTTCCTTTTGATTGCTTCTG  Raphanus raphanistrum subsp. maritimus
FD538713       <-- AATTCTTGAGATCCATGTTAAAGAGGAACACTTCCTTTTGATTGCTTCTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD958878       <-- AATTCCTGAGATCCATGTTAAAGAGGAACACTTCCTTTTGATTGCTTCTG  Raphanus raphanistrum subsp. maritimus
FD937286       <-- AATTCCTGAGATCCATGTTAAAGAGGAACATTTCATTCTGATTGCTTCTG  Raphanus sativus var. oleiformis
FD959094       <-- AATTCCTGAGATCCATGTTAAAGAGGAACACTTCCTTTTGATTGCTTCTG  Raphanus raphanistrum subsp. maritimus
FD936747       <-- ..................................................  Raphanus sativus var. oleiformis
EX767084       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD580001       --> AATTCCTGAGATCCATGTTAAAGAGGAACATTTCCTTTTGATTGCTTCTG  Raphanus sativus cv Rat-Tail Radish #3870
FD962297       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD962669       --> AATTCCTGAGATCCATGTTAAAGAGGAACACTTCCTTTTGATTGCTTCTG  Raphanus raphanistrum subsp. maritimus
FD941701       --> AATTCCTGAGATCCATGTTAAAGAGGAACATTTCATTCTGATTGCTTCTG  Raphanus sativus var. oleiformis
EX762917       --> AATTCCTGAGATCCATGTTAAAGAGGAACATTTCCTTTTGATTGCTTCTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD550924       --> AATTCCTGAGATCCATGTTAAAGAGGAACATTTCCTTTTGATTGCTTCTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV536626       --> AATTCCTGAGATCCATGTTAAAGAGGAACACTTCCTTTTGATTGCTTCTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD962575       --> AATTCCTGAGATCCATGTTAAAGAGGAACACTTCCTTTTGATTGCTTCTG  Raphanus raphanistrum subsp. maritimus
FD542715       --> AATTCTTGAGATCCATGTTAAAGAGGAACACTTCCTTTTGATTGCTTCTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY930938       --> AATTCCTGAGATCCATGTTAAAGAGGAACATTTCATTTTGATTGCTTCTG  Raphanus sativus var. oleiformis

               501    -    551
UN13968        --> CACTGAGAAACGAGCTGAACCAGGCCTTCGTTATCCTAAGGAGCATTGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959167       <-- CACTGAGAAACGAGCTGAACCAGGCCTTCGTTATCCTAAGGAGCATTGCA  Raphanus raphanistrum subsp. maritimus
FD538713       <-- CACTGAGAAACGAGCTGAACCAGGCCTTCGTTATCCTAAGGAGCATTGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD958878       <-- CACTGAGAAACGAGCTGAACCAGGCCTTCGTTATCCTAAGGAGCATTGCA  Raphanus raphanistrum subsp. maritimus
FD937286       <-- CACTGAGAAACGAGCTGAACCAGGCCTTCGTTATCATAAGGAGCATTGCA  Raphanus sativus var. oleiformis
FD959094       <-- CACTGAGAAACGAGCTGAACCAGGCCTTCGTTATCCTAAGGAGCATTGCA  Raphanus raphanistrum subsp. maritimus
FD936747       <-- ................GAACCAGGCCTTGGTC---ATAAGGAGCATTGCA  Raphanus sativus var. oleiformis
EX767084       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD580001       --> CACTGAGAAACGAGCTGAACCAGGCCTTCGTTATCCTAAGGAGCATTGCA  Raphanus sativus cv Rat-Tail Radish #3870
FD962297       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD962669       --> CACTGAGAAACGAGCTGAACCAGGCCTTCGTTATCCTAAGGAGCATTGCA  Raphanus raphanistrum subsp. maritimus
FD941701       --> CACTGAGAAACGAGCTGAACCAGGCCTTCGTTATCATAAGGAGCATTGCA  Raphanus sativus var. oleiformis
EX762917       --> CACTGAGAAACGAGCTGAACCAGGCCTTCGTTATCCTAAGGAGCATTGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD550924       --> CACTGAGAAACGAGCTGAACCAGGCCTTCGTTATCCTAAGGAGCATTGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV536626       --> CACTGAGAAACGAGCTGAACCAGGCCTTCGTTATCCTAAGGAGCATTGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD962575       --> CACTGAGAAACGAGCTGAACCAGGCCTTCGTTATCCTAAGGAGCATTGCA  Raphanus raphanistrum subsp. maritimus
FD542715       --> CACTGAGAAACGAGCTGAACCAGGCCTTCGTTATCCTAAGGAGCATTGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY930938       --> CACTGAGAAACGAGCTGAACCAGGCCTTCGTTATCATAAGGAGCATTGCA  Raphanus sativus var. oleiformis

               551    -    601
UN13968        --> TTAGGAAGGGACTTGAAGAAGTTTCTCATGGTGGTTGTTGGGCTGTGGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959167       <-- TTAGGAAGGGACTTGAAGAAGTTTCTCATGGTGGTTGTTGGGCTGTGGAT  Raphanus raphanistrum subsp. maritimus
FD538713       <-- TTAGGAAGGGACTTGAAGAAGTTTCTCATGGTGGTTGTTGGGCTATGGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD958878       <-- TTAGGAAGGGACTTGAAGAAGTTTCTCATGGTGGTTGTTGGGCTGTGGAT  Raphanus raphanistrum subsp. maritimus
FD937286       <-- TTAGGAAGGGACTTGAAGAAGTTTCTCATGGTGGTTGTTGGGCTGTGGAT  Raphanus sativus var. oleiformis
FD959094       <-- TTAGGAAGGGACTTGAAGAAGTTTCTCATGGTGGTTGTTGGGCTGTGGAT  Raphanus raphanistrum subsp. maritimus
FD936747       <-- TTAGGAAGGGACTTGAAGAAGTTTCTCATGGTGGTTGTTGGGCTGTGGAT  Raphanus sativus var. oleiformis
EX767084       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD580001       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD962297       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD962669       --> TTAGGAAGGGACTTGAAGAAGTTTCTCATGGTGGTTGTTGGGCTGTGGAT  Raphanus raphanistrum subsp. maritimus
FD941701       --> TTAGGAAGGGACTTGAAGAAGTTTCTCATGGTGGTTGTTGGGCTGTGGAT  Raphanus sativus var. oleiformis
EX762917       --> TTAGGAAGGGACTTGAAGAAGTTTCTCATGGTGGTTGTTGGGCTATGGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD550924       --> TTAGGAAGGGACTTGAAGAAGTTTCTCATGGTGGTTGTTGGGCTATGGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV536626       --> TTAGGAAGGGACTTGAAGAAGTTTCTCATGGTGGTTGTTGGGCTATGGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD962575       --> TTAGGAAGGGACTTGAAGAAGTTTCTCATGGTGGTTGTTGGGCTGTGGAT  Raphanus raphanistrum subsp. maritimus
FD542715       --> TTAGGAAGGGACTTGAAGAAGTTTCTCATGGTGGTTGTTGGGCTATGGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY930938       --> TTAGGAAGGGACTTGAAGAAGTTTCTCATGGTGGTTGTTGGGCTGTGGAT  Raphanus sativus var. oleiformis

               601    -    651
UN13968        --> AATCTCGGTTGTGGGCAACTGGTTCAACTTCTTGACCCTTGTCTACATAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959167       <-- AATCTCGGTTGTGGGCAACTGGTTCAACTTCTTGACCCTTGTCTACATAT  Raphanus raphanistrum subsp. maritimus
FD538713       <-- AATCTCTGTTGTGGGCAACTGGTTCAATTTCTTGACCCTTGTCTACATAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD958878       <-- AATCTCGGTTGTGGGCAACTGGTTCAACTTCTTGACCCTTGTCTACATAT  Raphanus raphanistrum subsp. maritimus
FD937286       <-- AATCTCGGTTGTGGGCAACTGGTTCAACTTCTTGACCCTTGTCTACATAT  Raphanus sativus var. oleiformis
FD959094       <-- AATCTCGGTTGTGGGCAACTGGTTCAACTTCTTGACCCTTGTCTACATAT  Raphanus raphanistrum subsp. maritimus
FD936747       <-- AATTTCGGTTGTGGGCAACCGGTTCAACTTCTTGACCCTTGTCTACATAT  Raphanus sativus var. oleiformis
EX767084       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD580001       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD962297       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD962669       --> AATCTCGGTTGTGGGCAACTGGTTCAACTTCTTGACCCTTGTCTACATAT  Raphanus raphanistrum subsp. maritimus
FD941701       --> AATCTCGGTTGTGGGCAACTGGTTCAACTTCTTGACCCTTGTCTACATAT  Raphanus sativus var. oleiformis
EX762917       --> AATCTCTGTTGTGGGCAACTGGTTCAATTTCTTGACCCTTGTCTACATAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD550924       --> AATCTCTGTTGTGGGCAACTGGTTCAATTTCTTGACCCTTGTCTACATAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV536626       --> AATCTCTGTTGTGGGCAACTGGTTCAATTTCTTGACCCTTGTCTACATAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD962575       --> AATCTCGGTTGTGGGCAACTGGTTCAACTTCTTGACCCTTGTCTACATAT  Raphanus raphanistrum subsp. maritimus
FD542715       --> AATCTCTGTTGTGGGCAACTGGTTCAATTTCTTGACCCTTGTCTACATAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY930938       --> AATCTCGGTTGTGGGCAACTGGTTCAACTTCTTGACCCTTGTCTACATAT  Raphanus sativus var. oleiformis

               651    -    701
UN13968        --> GTTTT-GTGGTGTTGCATACAGTACCGATGCTGTATGAGAAACATGAGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959167       <-- GTTTT-GTGGTGTTGCATACAGTACCGATGATGTATGAGAAACATGAGGA  Raphanus raphanistrum subsp. maritimus
FD538713       <-- GTTTT-GTGGTGTTGCATACGGTACCTATGCTGTATGAGAAACATGATGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD958878       <-- GTTTT-GTGGTGTTGCATACAGTACCGATGATGTATGAGAAACATGAGGA  Raphanus raphanistrum subsp. maritimus
FD937286       <-- GTTTT-GTGGTGTTGCATACAGTACCAATGCTGTATGAGAAACATGAGGA  Raphanus sativus var. oleiformis
FD959094       <-- GTTTT-GTGGTGTTGCATACAGTACCGATGATGTATGAGAAACATGAGGA  Raphanus raphanistrum subsp. maritimus
FD936747       <-- GTTTT-GTGGTGTTGCATACAGTACCAATGCTGTATGAGAAACATGAGGA  Raphanus sativus var. oleiformis
EX767084       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD580001       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD962297       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD962669       --> GTTTTTGTGGTGTTGCATACAGTACCGATGATGTATGAGAAACATGAG-A  Raphanus raphanistrum subsp. maritimus
FD941701       --> GTTTT-GTGGTGTTGCATACAGTACCAATGCTGTATGAGAAACATGAGGA  Raphanus sativus var. oleiformis
EX762917       --> GTTTT-GTGGTGTTGCATACAGTACCGATGTTGTATGAGAAACATGAGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD550924       --> GTTTT-GTGGTGTTGCATACAGTACCGATGTTGTATGAGAAACATGAGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV536626       --> GTTTT-GTGGTGTTGCATACGGTACCTATGCTGTATGAGAAACATGAGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD962575       --> GTTTT-GTGGTGTTGCATACAGTACCGATGATGTATGAGAAACATGAGGA  Raphanus raphanistrum subsp. maritimus
FD542715       --> GTTTT-GTGGTGTTGCATACGGTACCTATGCTGTATGAGAAACATGATGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY930938       --> GTTTT-GTGGTGTTGCATACAGTACCAATGCTGTATGAGAAACATGAGGA  Raphanus sativus var. oleiformis

               701    -    751
UN13968        --> CAAGGTGGATCCAGTGGCGGAGAAGACGATAAATGAACTGAAGAAACATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959167       <-- CAAGGTGGATCCAGTGGCGGAGAAGACGATAAATGAACTGAAGAAACATT
FD538713       <-- CAAGGTGGATCCAGTGGCGGAGAAGACGATAAATGAACTGAAGAAACATT
FD958878       <-- CAAGGTGGATCCAGTGGCGGAGAAGACGATAAATGAACTGAAGAAACATT
FD937286       <-- CAAGGTGGATCCAGTGGCGGAGAAGACGATAAATGAACTGAAGAAACATT
FD959094       <-- CAAGGTGGATCCAGTGGCGGAGAAGACGATAAATGAACTGAAGAAACATT
FD936747       <-- CAAGGTGGATCCACCGGCGGAGAAGACGATAAATGAACTGAAGAAACATT
EX767084       <-- ..................................................
FD580001       --> ..................................................
FD962297       --> ..................................................
FD962669       --> CAAG-TGGATCCAGTGGCGGAGAAGACGATAAATGAACTG..........
FD941701       --> CAAG-TGGATCCAGTGGCGGAGAAGACGATAAATGAACTGAAGAAACATT
EX762917       --> CAAGGTGGATCCAGTGGCGGAGAAGACGATAAATGAACTGAAGAAACATT
FD550924       --> CAAGGTGGATCCAGTGGCGGAGAAGACGATAAATGAACTGAAGAAACATT
EV536626       --> CAAGGTGGATCCAGTGGCGGAGAAGACGATAAATGAACTGAAGAAACATT
FD962575       --> CAAGGTGGATCCAGTGGCGGAGAAGACGATAAATGAACTGAAGAAACATT
FD542715       --> CAAGGTGGATCCAGTGGCGGAGAAGACGATAAATGAACTGAAGAAACATT
EY930938       --> CAAGGTGGATCCAGTGGCGGAGAAGACGATAAATGAACTGAAGAAACATT

               751    -    801
UN13968        --> ACATGGTTTTCGATGAGAAAGTTCTTTCTAAGATCCCTCTTGCTTCCCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959167       <-- ACATGGTTTTCGATGAGAAAGTTCTTTTTAAGATCCCTCTTGCTTCCCTG
FD538713       <-- ACATGGTTTTCGATGAGAAAGTTCTTTCTAAGATCCCTCTTGCTTCCCTG
FD958878       <-- ACATGGTTTTCGATGAGAAAGTTCTTTCTAAGATCCCTCTTGCTTCCCTG
FD937286       <-- ACATGGTTTTCGATGAGAAAGTTCTTTCTAAGATCCCTCTTGCTTCCCTG
FD959094       <-- ACATGGTTTTCGATGAGAAAGTTCTTTCTAAGATCCCTCTTGCTTCCCTG
FD936747       <-- ACATGGTTTTCGATGAGAAAGTTCTTTCTAAGATCCCTCTTGCTTCCCTG
EX767084       <-- ................................ATCCCTCTTGCTTCCCTG
FD580001       --> ..................................................
FD962297       --> ..................................................
FD962669       --> ..................................................
FD941701       --> ACATGGTTTT........................................
EX762917       --> ACATGGTTTTCGATGAGAAAGTTCTTTCTAAGATCCCTCTTGCTTCCCTG
FD550924       --> ACATGGTTTTCGATGAGAAAGTTCTTTCTAAGATCCCTCTTGCTTCCCT.
EV536626       --> ACATGGTTTTCGATGAGAAAGTTCTTTCTAAGATCCCTCTTGCTTCCCTG
FD962575       --> ACATGGTTTTCGATGAGAAAGTTCTTTCTA-GATCCCTCTTGCTTCCCTG
FD542715       --> ACATGGTTTTCGATGAGAAAGTTCTTTCTAAGATCCCTCTTGCTTCCCTG
EY930938       --> ACATGGTTTTCGATGAGAAAGTTCTTTCTAAGATCCCTCTTGCTTCCCTG

               801    -    851
UN13968        --> AAAGCAAAGTTGGGTTAGACACTTTATAATGAAAGTAACTATCTCTCTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959167       <-- AAAGCAAAGTTGGGTTAGACACTTTATAATGAAAGTAACTATCTCTCTAT
FD538713       <-- AAAGCAAAGTTGGGTTAGACACTTTATAATGAAAGTAACTATCTCTCTAT
FD958878       <-- AAAGCAAAGTTGGGTTAGACACTTTATAATGAAAGTAACTATCTCTCTAT
FD937286       <-- AAAGCAAAGTTGGGTTAGACACTTTATAATGAA-GTAACTATCTCTCTAT
FD959094       <-- AAAGCAAAGTTGGGTTAGACACTTTATAATGAAAGTAACTATCTCTCTAT
FD936747       <-- AAAGCAAAGTTGGGTTAGACACTTTATAATGAA-GTAACTATCTCTCTAT
EX767084       <-- AAAGCAAAGTTGGGTTAGACACTTTATAATGAAAGTAACTATCTCTCTAT
FD580001       --> ..................................................
FD962297       --> ..................................................
FD962669       --> ..................................................
FD941701       --> ..................................................
EX762917       --> AAAGCAAAGTTGGGTTAGACACTTTATA-TGAAAGTA-CTATCTCTCTAT
FD550924       --> ..................................................
EV536626       --> AAA...............................................
FD962575       --> AAAGCAAAGTTGGGT...................................
FD542715       --> AAAGCAAAGTTGGGTTAGACACTTTATAATGAAAGTAACTATCTCTCTAT
EY930938       --> AAAGCAAAGTTGGGTTAGACACTTTATAATGAA-GTAACTATCTCTCTAT

               851    -    901
UN13968        --> ATCCCCTTTGACGTTTTGCTTTGGTCTT--GGGGCATTTCTGTTTATTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959167       <-- ATCCCCTTTGACGTTTTGCTCTGGTCTT--GGGGCTTTTCTGTTTCTTTA
FD538713       <-- ATCCCCTTTGACGTTTTGTTTTGGTCTT--GGGGCATTTCTGTTTATTTA
FD958878       <-- ATCCCCTTTGACGTTTTGCTCTGGTCTT--GGGGCTTTTCTGTTTCTTTA
FD937286       <-- ATCCCCTTTGACGTTTTGCTTTGGTCTTTTGGGGCATTTCTGTTTATTTA
FD959094       <-- ATCCCCTTTGACGTTTTGCTCTGGTCTT--GGGGCTTTTCTGTTTCTTTA
FD936747       <-- ATCCCCTTTGACGTTTTGCTTTGGTCTTTTGGGGCATTTCTGTTTATTTA
EX767084       <-- ATCCCCTTTGACGTTTTGTTTTGGTCTT--GGGGCATTTCTGTTTATTTA
FD580001       --> ..................................................
FD962297       --> ..................................................
FD962669       --> ..................................................
FD941701       --> ..................................................
EX762917       --> ATCCCCTTTGACGTTTTGtttg............................
FD550924       --> ..................................................
EV536626       --> ..................................................
FD962575       --> ..................................................
FD542715       --> ATCCCCTTTGACGTTTTGTTTTGGTCTT--GGGGCATTTCTGTTTATTT-
EY930938       --> ATCCCCTTTGACGTTTTGCTTTGGTCTTTTGGGGCATTTCTGT--ATTTA

               901    -    951
UN13968        --> TATTTCTACACAAGACTCGATAAGAATCTGTTACTCTGTTTTTACTTGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959167       <-- TATTTCTACACAAGACTCGTTAAGAATCTGTTACTCTGTTTTTACTTGTG  Raphanus raphanistrum subsp. maritimus
FD538713       <-- TATTTCTACACAAGACTCGATAAGAATCTGTTACTCTGCTTTTACTTGTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD958878       <-- TATTTCTACACAAGACTCGTTAAGAATCTGTTACTCTGTTTTTACTTGTG  Raphanus raphanistrum subsp. maritimus
FD937286       <-- TATTTCTACACAAGACTCGATAAGAATCTGTTACTCTGTTTTTACTTGTG  Raphanus sativus var. oleiformis
FD959094       <-- TATTTCTACACAAGACTCGTTAAGAATCTGTTACTCTGTTTTTACTTGTG  Raphanus raphanistrum subsp. maritimus
FD936747       <-- TATT..............................................  Raphanus sativus var. oleiformis
EX767084       <-- TATTTTTACACAAGACTCGATAAGAATCTGTT..................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD580001       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD962297       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD962669       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD941701       --> ..................................................  Raphanus sativus var. oleiformis
EX762917       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD550924       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV536626       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD962575       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD542715       --> TATTTCTACACA-GACTCGATAAaa.........................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY930938       --> TATTTCTACACAAGACTCGATAAGAATCTGTTACTCTGTTT.........  Raphanus sativus var. oleiformis

               951    -   1001
UN13968        --> TTCATTTGTCTCATTTGGCGTGAGCATTTTTGGG--CTATTTGATGTGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959167       <-- TTCATTTGTCTCATTTGGCGTGAGCATTTTTGGG--CTATTTGATGTGAA
FD538713       <-- TTCATTTCTATCATTTGGCGTGAGCATTTTTGGGGGCTATTTGATGTGAA
FD958878       <-- TTCATTTGTCTCATTTGGCGTGAGCATTTTTGGG--CTATTTGATGTGAA
FD937286       <-- TTCATTTCTATCATTTGGCGTGAGCATTTTTGGG-GTTATTTGATGTGAA
FD959094       <-- TTCATTTGTCTCATTTGGCGTGAGCATTTTTGGG--CTATTTGATGTGAA
FD936747       <-- ..................................................
EX767084       <-- ..................................................
FD580001       --> ..................................................
FD962297       --> ..................................................
FD962669       --> ..................................................
FD941701       --> ..................................................
EX762917       --> ..................................................
FD550924       --> ..................................................
EV536626       --> ..................................................
FD962575       --> ..................................................
FD542715       --> ..................................................
EY930938       --> ..................................................

               1001   -   1051
UN13968        --> CGATGAGATTATATGATGATAAAAATGTTTATTTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959167       <-- CAATG...............................
FD538713       <-- CGATG...............................
FD958878       <-- CAATG...............................
FD937286       <-- CGATGAGATTATATGATGATAAAAATGTTTATTTCT
FD959094       <-- CAATG...............................
FD936747       <-- ....................................
EX767084       <-- ....................................
FD580001       --> ....................................
FD962297       --> ....................................
FD962669       --> ....................................
FD941701       --> ....................................
EX762917       --> ....................................
FD550924       --> ....................................
EV536626       --> ....................................
FD962575       --> ....................................
FD542715       --> ....................................
EY930938       --> ....................................