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Alignment for radish unigene UN13979

               1      -     51
UN13979        --> GGACCAAAAAAAAAGAAAAAAAAAATAAAGATCGTCGTCGACACCAACTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD985388       <-- ..................................................
FD943804       <-- ..................................................
EV545334       <-- ..................................................
EV530750       <-- ..................................................
FD546605       <-- ..................................................
EX899038       <-- ..................................................
EX751681       <-- ..................................................
EX901065       <-- ..................................................
FD977478       <-- ..................................................
EY895813       <-- ..................................................
EV549961       --> GGACCAAAAAAAAAGAAAAAAAAAATAAAGATCGTCGTCGACACCAACTT
FD989627       --> ..ggacAAAAAAAAAAAAACAACAACAAAGATCGTCG---ACACCAACTT
EX747497       --> .......AAAAAAAAAAAACAACAACAAAGATCGTCG---ACACCAACTT
EY900215       --> ........AAAAAAAAAAACAACAACAAAGATCGTCG---ACACCAACTT
FD550679       --> ...............................ggGTCGTCGACACCAACTT
FD947949       --> ..................................................
EX897270       --> ..................................................

               51     -    101
UN13979        --> GCTGCTTT-----CTCCTTCGCACCGGAAGGATAGGACTAGAAAGAGTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD985388       <-- ..................................................
FD943804       <-- ..................................................
EV545334       <-- ..................................................
EV530750       <-- ..................................................
FD546605       <-- ..................................................
EX899038       <-- ..................................................
EX751681       <-- ..................................................
EX901065       <-- ..................................................
FD977478       <-- ..................................................
EY895813       <-- ..................................................
EV549961       --> GCTGCTGT-----CTCCTTCGCACCGGAAGGA-----CTAGAAATAGTTT
FD989627       --> GCTGCTTT-----CTCCTTCGGACCGGAAGGA-----CTAGAAAGAGTTT
EX747497       --> GCTGCTTT-----CTCCTTCGCACCGGAAGGATAGGACTAGAAAGAGTTT
EY900215       --> GCTGCTTT-----CTCCTTCGCACCGGAAGGATAGGACTAGAAAGAGTTT
FD550679       --> GCTGCTTTGCTTTCTCCTTCGCACCGGAAGGATAGGACTAGAAAGAGTTT
FD947949       --> ...........ggCTCCTTCGGACCGGAAGGATAGGACTAGAAAGAGTTT
EX897270       --> ..................................................

               101    -    151
UN13979        --> CACCTACTAGAAAACATGATGGGAGACTCTTCTTCGGGTTCAACCTCTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD985388       <-- ........aagAAACATGATGG-AGACTCTTCTTCGGGTTCAACCTCTTG  Raphanus raphanistrum subsp. landra
FD943804       <-- ...........................................CCTCT-G  Raphanus sativus cv Early Scarlet Globe
EV545334       <-- ................................................TG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV530750       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD546605       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX899038       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX751681       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX901065       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD977478       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY895813       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV549961       --> CACCTACTAGAAAACATGATGGGAGACTCTTCTTCCGGTTCAACCTCTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD989627       --> CACCTACAAGAAAACATGATGGGAGACTCTTCTTCGGGTTCAACCTCTTG  Raphanus raphanistrum subsp. landra
EX747497       --> CACCTACAAGAAAACATGATGGGAGACTCTTCTTCGGGTTCAACCTCTTG  Raphanus raphanistrum subsp. maritimus
EY900215       --> CACCTACAAGAAAACATGATGGGAGACTCTTCTTCGGGTTCAACCTCTTG  Raphanus raphanistrum subsp. maritimus
FD550679       --> CACCTACTAGAAAACATGGTGGGAGACTCTTCTTCGAGTTCAACCTCTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD947949       --> CACCTACTAGAAAACATGATGGGAGACTCTTCTTCGGGTTCAACCTCTTG  Raphanus sativus cv Early Scarlet Globe
EX897270       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               151    -    201
UN13979        --> GAGCAGTCAAAGGGATACTCAAGATGATCGGATGATTGCTCTTATGTTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD985388       <-- GAGCAATCAAAGGGATACTCAAGATGATCGGATGATTGCTCTTATGTTAT
FD943804       <-- GAGCAGTCAAAGGGATACTCAAGATGATCGGATGATTGCTCTTATGTTAT
EV545334       <-- GAGCAGTCAAAGGGATACTCAAGATGATCGGATGATTGCTCTTATGTTAT
EV530750       <-- ..................................................
FD546605       <-- ..................................................
EX899038       <-- ..................................................
EX751681       <-- ..................................................
EX901065       <-- ..................................................
FD977478       <-- ..................................................
EY895813       <-- ..................................................
EV549961       --> GAGCAGTCAAAGGGATACTCAAGATGATCGGATGATTGCTCTTATGTTAT
FD989627       --> GAGCAATCAAAGGGATACTCAAGATGATCGGATGATTGCTCTTATGTTAT
EX747497       --> GAGCAGTCAAAGGGATACTCAAGATGATCGGATGATTGCTCTTATGTTAT
EY900215       --> GAGCAGTCAAAGGGATACTCAAGATGATCGGATGATTGCTCTTATGTTAT
FD550679       --> GAGCAGTCAAAGGGATACTCAAGATGATCGGATGATTGCTCTTATGTTAT
FD947949       --> GAGCAGTCAAAGGGATACTCAAGATGATCGGATGATTGCTCTTATGTTAT
EX897270       --> ..................................................

               201    -    251
UN13979        --> CTGAAGAGTACACTAACCTAGATGGTGCTGTTGCCAGACGCCTCTCCAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD985388       <-- CTGAAGAGTACACTAACCTAGATGGTGCTGTTGCCAGACGCCTCTCCAAT
FD943804       <-- CTGAAGAGTACACTAACCTAGATGGTGCTGTTGCCAGACGCCTCTCCAAT
EV545334       <-- CTGAAGAGTACACTAACCTAGATGGTGCTGTTGCCAGACGCCTCTCCAAT
EV530750       <-- .....................ATGGTGCTGTTGCCAGACGCCTCTCCAAT
FD546605       <-- ..................................................
EX899038       <-- ..................................................
EX751681       <-- ..................................................
EX901065       <-- ..................................................
FD977478       <-- ..................................................
EY895813       <-- ..................................................
EV549961       --> CTGAAGAGTACACTAACCTAGATGGTGCTGTTGCCAGACGCCTCTCCAAT
FD989627       --> CTGAAGAGTACACTAACCTAGATGGTGCTGTTGCCAGACGCCTCTCCAAT
EX747497       --> CTGAAGAGTACACTAACCTAGATGGTGCTGTTGCCAGACGCCTCTCCAAT
EY900215       --> CTGAAGAGTACACTAACCTAGATGGTGCTGTTGCCAGACGCCTCTCCAAT
FD550679       --> CTGAAGGGTACACTAACCTAGATGGTGCTGTTGCCAGACGCCTCTCCAAT
FD947949       --> CTGAAGAGTACACTAACCTAGATGGTGCTGTTGCCAGACGCCTCTCCAAT
EX897270       --> .........ACACTAACCTAGATGGTGCTGTTGCCAGACGCCTCTCCAAT

               251    -    301
UN13979        --> CTTGCTCCCGTTCCCCATGTTCCGCGAATAAATTCTTATATCCCCAACTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD985388       <-- CTTGCTCCCGTTCCCCATGTTCCGCGAATAAATTCTTATATCCCCAACTT
FD943804       <-- CTTGCTCCCGTTCCCCATGTTCCGCGAATAAATTCTTATATCCCCAACTT
EV545334       <-- CTTGCTCCCGTTCCCCATGTTCCGCGAATAAATTCTTATATCCCCAACTT
EV530750       <-- CTTGCTCCCGTTCCCCATGTTCCGCGAATAAATTCTTATATCCCCAACTT
FD546605       <-- ............................TAAATTCTTATATCCCCAACTT
EX899038       <-- ....................................TATATCCCCAACTT
EX751681       <-- ..................................................
EX901065       <-- ..................................................
FD977478       <-- ..................................................
EY895813       <-- ..................................................
EV549961       --> CTTGCTCCCGTTCCCCATGTTCCGCGAATAAATTCTTATATCCCCAACTT
FD989627       --> CTTGCTCCCGTTCCCCATGTTCCGCGAATAAATTCTTATATCCCCAACTT
EX747497       --> CTTGCTCCCGTTCCCCATGTTCCGCGAATAAATTCTTATATCCCCAACTT
EY900215       --> CTTGCTCCCGTTCCCCATGTTCCGCGAATAAATTCTTATATCCCCAACTT
FD550679       --> CTTGCTCCCGTTCCCCATGTTCCGCGAATAAATTCTTATATCCCCAACTT
FD947949       --> CTTGCTCCCGTTCCCCATGTTCCGCGAATAAATTCTTATATCCCCAACTT
EX897270       --> CTTGCTCCCGTTCCCCATGTTCCGCGAATAAATTCTTATATCCCCAACTT

               301    -    351
UN13979        --> AAATGATGCCACCTTGGATCACCAACGCCTTCTTCAAAGGCTAAATGTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD985388       <-- AAATGATGCCACCTTGGATCACCAACGCCTTCTTCAAAGGCTAAATGTTT
FD943804       <-- AAATGATGCCACCTTGGATCACCAACGCCTTCTTCAAAGGCTAAATGTTT
EV545334       <-- AAATGATGCCACCTTGGATCACCAACGCCTTCTTCAAAGGCTAAATGTTT
EV530750       <-- AAATGATGCCACCTTGGATCACCAACGCCTTCTTCAAAGGCTAAATGTTT
FD546605       <-- AAATGATGCCACCTTGGATCACCAACGCCTTCTTCAAAGGCTGAATGTTT
EX899038       <-- AAATGATGCCACCTTGGATCACCAACGCCTTCTTCAAAGGCTAAATGTTT
EX751681       <-- ....................................AAGGCTAAATGTTT
EX901065       <-- ..................................................
FD977478       <-- ..................................................
EY895813       <-- ..................................................
EV549961       --> AAATGATGCCACCTTGGATCACCAACGCCTTCTTCAAAGGCTAAATGTTT
FD989627       --> AAATGATGCCACCTTGGATCACCAACGCCTTCTTCAAAGGCTAAATGTTT
EX747497       --> AAATGATGCCACCTTGGATCACCAACGCCTTCTTCAAAGGCTAAATGTTT
EY900215       --> AAATGATGCCACCTTGGATCACCAACGCCTTCTTCAAAGGCTAAATGTTT
FD550679       --> AAATGATGCCACCTTGGATCACCAACGCCTTCTTCAAAGGCTGAATGTTT
FD947949       --> AAATGATGCCACCTTGGATCACCAACGCCTTCTTCAAAGGCTAAATGTTT
EX897270       --> AAATGATGCCACCTTGGATCACCAACGCCTTCTTCAAAGGCTAAATGTTT

               351    -    401
UN13979        --> ATGGTTTGTGTGAGTTGAAGGTCTCTGGTGATGGAAACTGCCAGTTCCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD985388       <-- ATGGTTTGTGTGAGTTGAAGGTCTCTGGTGATGGAAACTGCCAGTTCCGA
FD943804       <-- ATGGTTTGTGTGAGTTGAAGGTCTCTGGTGATGGAAACTGCCAGTTCCGA
EV545334       <-- ATGGTTTGTGTGAGTTGAAGGTCTCTGGTGATGGAAACTGCCAGTTCCGA
EV530750       <-- ATGGTTTGTGTGAGTTGAAGGTCTCTGGTGATGGAAACTGCCAGTTCCGA
FD546605       <-- ATGGTTTGTGTGAGTTGAAGGTCTCTGGTGATGGAAACTGCCAGTTCCGA
EX899038       <-- ATGGTTTGTGTGAGTTGAAGGTCTCTGGTGATGGAAACTGCCAGTTCCGA
EX751681       <-- ATGGTTTGTGTGAGTTGAGGGTCTCTGGTGATGGAAACTGCCAGTTCCGA
EX901065       <-- ..........................GGTGATGGAAACTGCCAGTTCCGA
FD977478       <-- ..........................GGTGATGGAAACTGCCAGTTCCGA
EY895813       <-- .................................................A
EV549961       --> ATGGTTTGTGTGAGTTGAAGGTCTCTGGTGATGGAAACTGCCAGTTCCGA
FD989627       --> ATGGTTTGTGTGAGTTGAAGGTCTCTGGTGATGGAAACTGCCAGTTCCGA
EX747497       --> ATGGTTTGTGTGAGTTGAGGGTCTCTGGTGATGGAAACTGCCAGTTCCGA
EY900215       --> ATGGTTTGTGTGAGTTGAAGGTCTCTGGTGATGGAAACTGCCAGTTCCGA
FD550679       --> ATGGTTTGTGTGAGTTGAAGGTCTCTGGTGATGGAAACTGCCAGTTCCGA
FD947949       --> ATGGTTTGTGTGAGTTGAAGGTCTCTGGTGATGGAAACTGCCAGTTCCGA
EX897270       --> ATGGTTTGTGTGAGTTGAAGGTCTCTGGTGATGGAAACTGCCACTTCCGA

               401    -    451
UN13979        --> GCTCTTTCCGACCAGTTGTACCGATCTTCAGAGTACCACAAGCAAGTTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD985388       <-- GCTCTTTCCGACCAGTTGTACCGATCTTCAGAGTACCACAAGCAAGTTAG  Raphanus raphanistrum subsp. landra
FD943804       <-- GCTCTTTCCGACCAGTTGTACCGATCTTCAGAGTACCACAAGCAAGTTAG  Raphanus sativus cv Early Scarlet Globe
EV545334       <-- GCTCTTTCCGACCAGTTGTACCGATCTTCAGAGTACCACAAGCAGGTTAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV530750       <-- GCTCTTTCCGACCAGTTGTACCGATCTTCAGAGTACCACAAGCAAGTTAG  Raphanus raphanistrum subsp. maritimus
FD546605       <-- GCTCTTTCCGACCAGTTGTACCGATCTTCAGAGTACCACAAGCAGGTTAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX899038       <-- GCTCTTTCCGACCAGTTGTACCGATCTTCAGAGTACCACAAGCAAGTTAG  Raphanus sativus cv Early Scarlet Globe
EX751681       <-- GCTCTTTCCGACCAGTTGTACCGATCTTCAGAGTACCACAAGCAAGTTAG  Raphanus raphanistrum subsp. maritimus
EX901065       <-- GCTCTTTCCGACCAGTTGTACCGATCTTCAGAGTACCACAAGCAAGTTAG  Raphanus sativus cv Early Scarlet Globe
FD977478       <-- GCTCTTTCCGACCAGTTGTACCGGTCTTCAGAGTACCACAAGCAGGTTAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY895813       <-- GCTCTTTCCGACCAGTTGTACCGATCTTCAGAGTACCACAAGCAAGTTAG  Raphanus raphanistrum subsp. maritimus
EV549961       --> GCTCTTTCCGACCAGTTGTACCGATCTTCAGAGTACCACAAGCAGGTTAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD989627       --> GCTCTTTCCGACCAGTTGTACCGATCTTCAGAGTACCACAAGCAAGTTAG  Raphanus raphanistrum subsp. landra
EX747497       --> GCTCTTTCCGACCAGTTGTACCGATCTTCAGAGTACCACAAGCAAGTTAG  Raphanus raphanistrum subsp. maritimus
EY900215       --> GCTCTTTCCGACCAGTTGTACCGATCTTCAGAGTACCACAAGCAAGTTAG  Raphanus raphanistrum subsp. maritimus
FD550679       --> GCTCTTTCCGACCAGTTGTACCGATCTTCAGAGTACCACAAGCAGGTTAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD947949       --> GCTCTTTCCGACCAGTTGTACCGATCTTCAGAGTACCACAAGCAAGTTAG  Raphanus sativus cv Early Scarlet Globe
EX897270       --> GCTCTTTCCGACCAGTTGTACCGATCTTCAGAGTACCACAAGCAA.....  Raphanus sativus cv Early Scarlet Globe

               451    -    501
UN13979        --> GGGAGAAGTTGTTAAACAGCTCAAGGACAATCGCACTATGTACGAAAGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD985388       <-- GGGAGAAGTTGTTAAACAGCTCAAGGACAATCGCACTATGTACGAAAGTT
FD943804       <-- GGGAGAAGTTGTTAAACAGCTCAAGGACAATCGCACTATGTACGAAAGTT
EV545334       <-- GGGAGAAGTTGTTAAACAGCTCAAGGACAATCGCACTATGTACGAAAGTT
EV530750       <-- GGGAGAAGTTGTTAAACAGCTCAAGGACAATCGCACTATGTACGAAAGTT
FD546605       <-- GGGAGAAGTTGTTAAACAGCTCAAGGACAATCGCACTATGTACGAAAGTT
EX899038       <-- GGGAGAAGTTGTTAAACAGCTCAAGGACAATCGCACTATGTACGAAAGTT
EX751681       <-- GGGAGAAGTTGTTAAGCAGCTCAAGGACAATCGCACTATGTACGAAAGTT
EX901065       <-- GGGAGAAGTTGTTAAACAGCTCAAGGACAATCGCACTATGTACGAAAGTT
FD977478       <-- GGGAGAAGTTGTTAAACAGCTCAAGGACAATCGCACTATGTACGAAAGTT
EY895813       <-- GGGAGAAGTTGTTAAACAGCTCAAGGACAATCGCACTATGTACGAAAGTT
EV549961       --> GGGAGAAGTTGTTAAACAGCTCAAGGACAATCGCACTATGTACGAAAGTT
FD989627       --> GGGAGAAGTTGTTAAACAGCTCAAGGACAATCGCACTATGTACGAAAGTT
EX747497       --> GGGAGAAGTTGTTAAGCAGCTCAAGGACAATCGCACTATGTACGAAAGTT
EY900215       --> GGGAGAAGTTGTTAAACAGCTCAAGGACAATCGCACTATGTACGAAAGTT
FD550679       --> GGGAGAAGTTGTTAAACAGCTCAAGGACAATCGCACTATGTACGAAAGTT
FD947949       --> GGGAGAAGTTGTTAAACAGCTCAAGGACAATCGCACTATGTACGAAAGTT
EX897270       --> ..................................................

               501    -    551
UN13979        --> ATGTTCCTATGAAATACAAACGGTATTACAAGAAGATGGCAAAACTTGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD985388       <-- ATGTTCCTATGAAATACAAACGGTATTACAAGAAGATGGCAAAACTTGGA
FD943804       <-- ATGTTCCTATGAAATACAAACGGTATTACAAGAAGATGGCAAAACTTGGA
EV545334       <-- ATGTTCCTATGAAATACAAACGGTATTACAAGAAGATGGCAAAACTTGGA
EV530750       <-- ATGTTCCTATGAAATACAAACGGTATTACAAGAAGATGGCAAAACTTGGA
FD546605       <-- ATGTTCCTATGAAATACAAACGGTATTACAAGAAGATGTCAAAACTTGGA
EX899038       <-- ATGTTCCTATGAAATACAAACGGTATTACAAGAAGATGGCAAAACTTGGA
EX751681       <-- ATGTTCCTATGAAATACAAACGGTATTACAAGAAGATGGCAAAACTTGGA
EX901065       <-- ATGTTCCTATGAAATACAAACGGTATTACAAGAAGATGGCAAAACTTGGA
FD977478       <-- ATGTTCCTATGAAATACAAACGGTATTACAAGAAGATGGCAAAACTTGGA
EY895813       <-- ATGTTCCTATGAAATACAAACGGTATTACAAGAAGATGGCAAAACTTGGA
EV549961       --> ATGTTCCTATGAAATACAAACGGTATTACAAGAAGATGGCAAAACTTGGA
FD989627       --> ATGTTCCTATGAAATACAAACGGTATTACAAGAAGATGGCAAAACTTGGA
EX747497       --> ATGTTCCTATGAAATACAAACGGTATTACAAGAAGATGGCAAAACTTGGA
EY900215       --> ATGTTCCTATGAAATACAAACGGTATTACAAGAAGATGGCAAAACTTGGA
FD550679       --> ATGTTCCTATGAAATACAAACGGTATTACAAGAAGATGTCAAAACTTGGA
FD947949       --> ATGTTCCTATGAAATACAAACGGTATTACAAGAAGATGGCAAAACTTGGA
EX897270       --> ..................................................

               551    -    601
UN13979        --> GAATGGGGAGACCATATTACCCTACAATCTGCGGCAGATAGGTTTGCAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD985388       <-- GAATGGGGAGACCATATTACCCTACAATTTGCGGCAGATAGGTTTGCAGC
FD943804       <-- GAATGGGGAGACCATATTACCCTACAATCTGCGGCAGATAGGTTTGCAGC
EV545334       <-- GAATGGGGAGACCATATTACCCTACAATTTGCGGCAGATAGGTTTGCAGC
EV530750       <-- GAATGGGGAGACCATATTACCCTACAATCTGCGGCAGATAGGTTTGCAGC
FD546605       <-- GAATGGGGAGACCATATTACCCTACAATCTGCGGCAGATAGGTTTGCAGC
EX899038       <-- GAATGGGGAGACCATATTACCCTACAATCTGCGGCAGATAGGTTTGCAGC
EX751681       <-- GAATGGGGAGACCATATTACCCTACAATCTGCGGCAGATAGGTTTGCAGC
EX901065       <-- GAATGGGGAGACCATATTACCCTACAATCTGCGGCAGATAGGTTTGCAGC
FD977478       <-- GAATGGGGAGACCATATTACCCTACAATCTGCGGCAGATAGGTTTGCAGC
EY895813       <-- GAATGGGGAGACCATATTACCCTACAATCTGCGGCAGATAGGTTTGCAGC
EV549961       --> GAATGGGGAGACCATATTACCCTACAATCTGCGGCAGATAGGTTTGCAGC
FD989627       --> GAATGGGGAGACCATATTACCCTACAATCTGCGGCAGATAGGTTTGCAGC
EX747497       --> GAATGGGGAGACCATATTACCCTACAATCTGCGGCAGATAGGTTTGCAGC
EY900215       --> GAATGGGGAGACCATATTACCCTACAATCTGCGGCAGATAG.........
FD550679       --> GAATGGGGAGACCATATTACCCTACAATCTGCGGCAGATAGGTTTGCAGC
FD947949       --> GAATGGGGAGACCATATTACCCTACAATCTGCGGCAGATAGGTTTGCAGC
EX897270       --> ..................................................

               601    -    651
UN13979        --> AAAGATATGCCTGCTGACATCCTTCAGAGACACTTGTTTCATTGAAATCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD985388       <-- AAAGATATGCCTGCTGACATCCTTCAGAGACACTTGTTTCATTGAAATCA
FD943804       <-- AAAGATATGCCTGCTGACATCCTTCAGAGACACTTGTTTCATTGAAATCA
EV545334       <-- AAAGATATGCCTGCTGACATCCTTCAGAGACACTTGTTTCATTGAAATCA
EV530750       <-- AAAGATATGCCTGCTGACATCCTTCAGAGACACTTGTTTCATTGAAATCA
FD546605       <-- AAAGATATGCCTGCTGACATCCTTCAGAGACACTTGTTTCATTGAAATCA
EX899038       <-- AAAGATATGCCTGCTGACATCCTTCAGAGACACTTGTTTCATTGAAATCA
EX751681       <-- AAAGATATGCCTGCTGACATCCTTCAGAGACCCTTGTTTCATTGAAATCA
EX901065       <-- AAAGATATGCCTGCTGACATCCTT..........................
FD977478       <-- AAAGATATGCCTGCTGGCATCCTTCAGAGACACTTGTTTCATTGAAATCA
EY895813       <-- AAAGATATGCCTGCTGACATCCTTCAGAGACACTTGTTTCATTGAAATCA
EV549961       --> AAAGATATGCCTGCTGACATCCTTCAGAGACACTTGTTTCATTGAAATCA
FD989627       --> AAAGATATGCCTGCTGACATCCTTCAGAGACACTTGTTTCATTGAAATCA
EX747497       --> AAAGATATGCCTGCTGACATCCTTCAGAGACCCTTGTTTCATTGAAATCA
EY900215       --> ..................................................
FD550679       --> AAAGATATGCCTGCTGACATCCTTCAGAGACACTTGTTTCATTGAAATCA
FD947949       --> AAAGATATGCCTGCTGACATCCTTCAGAGACACTTGTTTCATTGAAATCA
EX897270       --> ..................................................

               651    -    701
UN13979        --> TGCCTCGAGACCAAGCACCTAAGCGTGAGTTATGGTTAAGTTTCTGGTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD985388       <-- TGCCTCGAGACCAAGCACCTAAGCGTGAGTTATGGTTAAGTTTCTGGTCG
FD943804       <-- TGCCTCGAGACCAAGCACCTAAGCGTGAGTTATGGTTAAGTTTCTGGTCG
EV545334       <-- TGCCTCGAGACCAAGCACCTAAGCGTGAGTTATGGTTAAGTTTCTGGTCG
EV530750       <-- TGCCTCGAGACCAAGCACCTAAGCGTGAGTTATGGTTAAGTTTCTGGTCG
FD546605       <-- TGCCTCGAGACCAAGCACCTAAGCGTGAGCTATGGTTAAGTTTCTGGTCG
EX899038       <-- TGCCTCGAGACCAAGCACCTAAGCGTGAGTTATGGTTAAGTTTCTGGTCG
EX751681       <-- TGCCTCGAGACCAAGCACCTAA---GCAGTTATGGTTAAGTTTCTGGTCG
EX901065       <-- ..................................................
FD977478       <-- TGCCTCGAGACCAAGCACCTAAGCGTGAGTTATGGTTAAGTTTCTGGTCG
EY895813       <-- TGCCTCGAGACCAAGCACCTAAGCGTGAGTTATGGTTAAGTTTCTGGTCG
EV549961       --> TGCCTCGAGACCAAGCACCTAAGCGTGAGTTATGGTTAAGTTTCTGGTCG
FD989627       --> TGCCTCGAGACCAAGCACCTAAGCGT........................
EX747497       --> TGCCTCGAGACCAAGCACCTAAGC---AGTTATGGTTAAGTTTCTGGTC.
EY900215       --> ..................................................
FD550679       --> TGCCTCGAGACCAAGCACCTAAGCGTGAGCTATGGTTAAGTTTCTGGTCG
FD947949       --> TGCCTCGAGACCAAGCACCTAAGCGTGAGTTATGGTTAAGTTTC......
EX897270       --> ..................................................

               701    -    751
UN13979        --> GAGGTGCATTATAACTCTTTATACGACAATCGAGCGGTTCCAGTTCAGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD985388       <-- GAGGTGCATTATAACTCTTTATACGACAATCGAGCGGTTCCAGTTCAGCA
FD943804       <-- GAGGTGCATTATAACTCTTTATACGACAATCGAGCGGTTCCAGTTCAGCA
EV545334       <-- GAGGTGCATTATAACTCTTTATACGACAATCGAGCGGTTCCAGTTCAGCA
EV530750       <-- GAGGTGCATTATAACTCTTTATACGACGATCGAGCGGTTCCAGTTCAGCA
FD546605       <-- GAGGTGCATTATAACTCTTTATACGACAATCGAGCGGTTCCAGTTCAGCA
EX899038       <-- GAGGTGCATTATAACTCTTTATACGACAATCGAGCGGTTCCAGTTCAGCA
EX751681       <-- GAGGTGCATTATAACTCTTTATACGACGATCGAGCGGTTCCAGTTCAGCA
EX901065       <-- ..................................................
FD977478       <-- GAGGTGCATTATAACTCTTTATACGACAATCGAGCGGTTCCAGTTCAGCA
EY895813       <-- GAGGTGCATTATAACTCTTTATACGACTATCGAGCGGTTCCAGTTCAGCA
EV549961       --> GAG-TGCATTATAACTCTTTATACGACAATCGAGCGGTTCCAGTTCAGCA
FD989627       --> ..................................................
EX747497       --> ..................................................
EY900215       --> ..................................................
FD550679       --> GAGGTGCATTATAACTCTTTATACGACAATCGAGCGGTTCCAGTTCAGC.
FD947949       --> ..................................................
EX897270       --> ..................................................

               751    -    801
UN13979        --> GAAGCCAAAGAGAAAACATTGGTTGTTCTAGAAAGCAAGTGTCAGGACAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD985388       <-- GAAGCCAAAGAGAAAACATTGGTTGTTCTAGAAAGCAAGTGTCAGGACAA
FD943804       <-- GAAGCCAAAGAGAAAACATTGGTTGTTCTAGAAAGCAAGTGTCAG-ACAA
EV545334       <-- GAAGCCAAAGAGAAAACATTGGTTGTTCTAGAAAGCAAGTGTCAGGACAA
EV530750       <-- GAAGCCAAAGAGAAAACATTGGTTGTTCTAGAAAGCAAGTGTCAGGACAA
FD546605       <-- GAAGCCAAAGAGAAAACATTGGTTGTTCTAGAAAGCAAGTGTCAGGACAA
EX899038       <-- GAAGCCAAAGAGAAAACATTGGTTGTTCTAGAAAGCAAGTGTCAG-ACAA
EX751681       <-- GAAGCCAAAGAGAAAACATTGGTTGTTCTAGAAAGCAAGTGTCAGGACAA
EX901065       <-- ..................................................
FD977478       <-- GAAACCAAAGAGAAAACATTGGTTGTTCTAGAAAGCAAGTCTTAGGACAA
EY895813       <-- GAAGCCAAAGAGAAAACATTGGTTGTTCTAGAAAGCAAGTGTCAGGACAA
EV549961       --> GAAGCCAAAGAGAAA-CATTGGTTGTTCTAGAAAGCAAGTG.........
FD989627       --> ..................................................
EX747497       --> ..................................................
EY900215       --> ..................................................
FD550679       --> ..................................................
FD947949       --> ..................................................
EX897270       --> ..................................................

               801    -    851
UN13979        --> CATCTTCATATTATTATTTTGTATCAGTATTGTGCATAAGTCAA-CATTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD985388       <-- CATCTTCATATTATTATTTTGTATCAGTATTGTGCATAAGTCAAACATTT  Raphanus raphanistrum subsp. landra
FD943804       <-- CATCTTCATATTATTATTTTGTATCAGTATTGTGCATAAGTCAA-CATTT  Raphanus sativus cv Early Scarlet Globe
EV545334       <-- CATGTTCATATTA---TTTTGTATCAGTATTGTGCATAAGTCAA-CATTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV530750       <-- CATCTTCATATTATTATTTTGTATCAGTATTGTGCATAAGTCAAACATTT  Raphanus raphanistrum subsp. maritimus
FD546605       <-- CATGTTCATATTATTATTTTGTATCAGTATTGTGCATAAGTCAA-CATTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX899038       <-- CATCTTCATATTATTATTTTGTATCAGTATTATGCATAAGTCAA-CATTT  Raphanus sativus cv Early Scarlet Globe
EX751681       <-- CATCTTCATATTATTATTTTGTATCAGTATTGTGCATAAGTCAAACATTT  Raphanus raphanistrum subsp. maritimus
EX901065       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD977478       <-- CATCTTCATATTA---TTTTGTATCAGTATTGTGCATAAGTCAA-CATTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY895813       <-- CATCTTCATATTATTATTTTGTATCAGTATTGTGCATAAGTCAAACATTT  Raphanus raphanistrum subsp. maritimus
EV549961       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD989627       --> ..................................................  Raphanus raphanistrum subsp. landra
EX747497       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY900215       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD550679       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD947949       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX897270       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               851    -    901
UN13979        --> TCAGACGCCGCAACTCTTCCTTTGTACTTGTGTATACACT-T-GAACTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD985388       <-- TCAGACGCCGCAACTCTTCCTTTGTACTTGTGTATACACT-T-GAACT--  Raphanus raphanistrum subsp. landra
FD943804       <-- TCAGACGCCGCAACTCTTCCTTTGTACTTGTGTATACACTCTCGAACTAT  Raphanus sativus cv Early Scarlet Globe
EV545334       <-- TCAGACGCCGCAACTCTTCCTTTGTACTTGTGTATACACT-C-GAACTAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV530750       <-- TCAGACGCCGCAACTCTTCCTTTGTACTTGTGTATACACT-T-GAACT--  Raphanus raphanistrum subsp. maritimus
FD546605       <-- TCAGACGCCGCAACTCTTCCTTTGTACTTGTGTATACACT-C-GAACTAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX899038       <-- TCAGACGCCGCAACTCTTCCTTTGTACTTGTGTATACACTCTCGAACTAT  Raphanus sativus cv Early Scarlet Globe
EX751681       <-- TCAGACGCCGCAACTCTTCCTTTGTACTTGTGTATACACT-T-GAACT--  Raphanus raphanistrum subsp. maritimus
EX901065       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD977478       <-- TCAGACGCCGCAACTCTTCCTTTGTACTTGTGTATACACT-C-GAACTAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY895813       <-- TCAGACGCCGCAACTCTTCCTTTGTACTTGTGTATACACT-T-GAACT--  Raphanus raphanistrum subsp. maritimus
EV549961       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD989627       --> ..................................................  Raphanus raphanistrum subsp. landra
EX747497       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY900215       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD550679       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD947949       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX897270       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               901    -    951
UN13979        --> AGCTTGAGCGATAACTTTTTTT-AAATCGAACAGAACATTTACCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD985388       <-- AGCTTGAGCG...................................
FD943804       <-- AGCTTGAGCGATAACTTTTTTTTAAATCGAACAGAACATTTACCC
EV545334       <-- AGCTTGAGCGATAACTTTTTTT.......................
EV530750       <-- AGCTTGAGCGATAACTTTTTTT-AAATCGAACAGAACATTTACCC
FD546605       <-- AGCTTGAGCGATAACTTTTTT--AAATCGAACAGAGCATTTACCC
EX899038       <-- AGCTTGAGCGATAACTTTTTTTTAAATCGAACAGAACATTTACCC
EX751681       <-- AGCTTGAGCGATAACTTTTTTT-AAATCGAACAGAACATTTACCC
EX901065       <-- .............................................
FD977478       <-- AGCTTGAGCGATAACTTTTTT--AAATCGAACAGAACAATTACCC
EY895813       <-- AGCTTGAGCGATAACTTTTTTT.......................
EV549961       --> .............................................
FD989627       --> .............................................
EX747497       --> .............................................
EY900215       --> .............................................
FD550679       --> .............................................
FD947949       --> .............................................
EX897270       --> .............................................