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Alignment for radish unigene UN13989

               1      -     51
UN13989        --> ATAAATTGAAATTCTATGTACTTGGGGGGGGGGGAGATAGAAAAGAAAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD529713       <-- ..................................................
FD976099       <-- ..................................................
FD960683       <-- ..................................................
EX901017       <-- ..................................................
EY918396       <-- ..................................................
FD533561       --> ATAAATTGAAATTCTATGTACTTGGGGGGGGGGGAGATAGAAAAGAAAGT
FD964766       --> ...........TTCTATGTACTTGGGGGGGGGGGAGATAGAAAAGAAAGT
FD980163       --> ..................................................
FD940474       --> ..................................................
EY922432       --> ..................................................
FD946680       --> ..................................................
FD536033       --> ..................................................

               51     -    101
UN13989        --> GAGCCATTAAAAACACCAGATCTCTCTCAAGTCCGTAGAAAGAAAAGGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD529713       <-- .............................AGTCCGTAGAAAGAAAAGGAA
FD976099       <-- .................................................A
FD960683       <-- ..................................................
EX901017       <-- ..................................................
EY918396       <-- ..................................................
FD533561       --> GAGCCATTAAAAACACCAGATCTCTCTCAAGTCCGTAGAAAGAAAAGGAA
FD964766       --> GAGCCATTAAAAACACCAGATCTCTCTCAAGTCCGTAGAAAGAAAAGGAA
FD980163       --> ....................................gGAAAGAAAAGAAA
FD940474       --> ............................................gggaAA
EY922432       --> ..................................................
FD946680       --> ..................................................
FD536033       --> ..................................................

               101    -    151
UN13989        --> AAGAACTTAAATAAGTGAGCCACTAAAAAAACTCTCTCAACGTCTCAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD529713       <-- AAGAACTTAAATAAGTGAGCCACTAAAAAAACTCTCTCAA-GTCTCAACA  Raphanus raphanistrum subsp. maritimus
FD976099       <-- AAAAACTTAAATAAGTGAGCCACTAAAAAAACTCTCTCAACGTCTCAACA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD960683       <-- ....................CACTAAAAAAACTCTCTCAA-GTCTCAACA  Raphanus raphanistrum subsp. maritimus
EX901017       <-- ........................AAAAAAACTCTCTCA-CGTCTCAACA  Raphanus sativus cv Early Scarlet Globe
EY918396       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD533561       --> AAGAACTTAAATAAGTGAGCCACTAAAAAAACTCTCTCAA-GTCTCAACA  Raphanus raphanistrum subsp. maritimus
FD964766       --> AAGAACTTAAATAAGTGAGCCACTAAAAAAACTCTCTCAA-GTCTCAACA  Raphanus raphanistrum subsp. maritimus
FD980163       --> AAAAACTTAAATAAGTGAGCCACTAAAAAAACTCTCTCAACGTCTCAACA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD940474       --> AAAAACTTAAATAAGTGAGCCACTAAAAAAACTCTCTCA-CGTCTCAACA  Raphanus sativus var. oleiformis
EY922432       --> ..........................................gCTCAACA  Raphanus raphanistrum subsp. landra
FD946680       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD536033       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               151    -    201
UN13989        --> GTCAACACTGACACTAAAATCAATGGGAGAGGAAGATAAGAAGAAAACAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD529713       <-- GTCAACACTGACACTAAAATCAATGGGAGAGGAAGATAAG---AAAACAG  Raphanus raphanistrum subsp. maritimus
FD976099       <-- GTCAACACTGACACTAAAATCAATGGGAGAGGAAGATAAGAAGAAAACAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD960683       <-- GTCAACACTGACACTAAAATCAATGGGAGAGGAAGATAAG---AAAACAG  Raphanus raphanistrum subsp. maritimus
EX901017       <-- GTCAACACTGACACTAAAATCAATGGGAGAGGAAGATAAGAAGAAAACAG  Raphanus sativus cv Early Scarlet Globe
EY918396       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD533561       --> GTCAACACTGACACTAAAATCAATGGGAGAGGAAGATAAGAA---AACAG  Raphanus raphanistrum subsp. maritimus
FD964766       --> GTCAACACTGACACTAAAATCAATGGGAGAGGAAGATAAGAA---AACAG  Raphanus raphanistrum subsp. maritimus
FD980163       --> GTCAACACTGACACTAAAATCAATGGGAGAGGAAGATAAGAAGAAAACAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD940474       --> GTCAACACTGACACTAAAATCAATGGTAGAGGAAGATAAGAGGAAAACAG  Raphanus sativus var. oleiformis
EY922432       --> GTCAACACTGACACTAAAATCAATGGGAGAGGAGGATAAGAAGAAAACAG  Raphanus raphanistrum subsp. landra
FD946680       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD536033       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               201    -    251
UN13989        --> AAGAGAAAATGGAGAAAAAAGCTGAAGAACCACAAGTGAAAAAAACTGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD529713       <-- AAGAGAAAATGGAGAAAAAAGCTGAAGAACCACAGGTGAAAAAAACAGAT  Raphanus raphanistrum subsp. maritimus
FD976099       <-- AAGAGAAAATGGAGAAAAAAGCTGAAGAACCACAAGTGAAAAAAACTGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD960683       <-- AAGAGAAAATGGAGAAAAAAGCTGAAGAACCACAGGTGAAAAAAACAGAT  Raphanus raphanistrum subsp. maritimus
EX901017       <-- AAGAGAAAATGGAGAAAAAAGCTGATGAACCACAAGTGAAAAAACCTGAT  Raphanus sativus cv Early Scarlet Globe
EY918396       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD533561       --> AAGAGAAAATGGAGAAAAAAGCTGAAGAACCACAGGTGAAAAAAACAGAT  Raphanus raphanistrum subsp. maritimus
FD964766       --> AAGAGAAAATGGAGAAAAAAGCTGAAGAACCACAGGTGAAAAAAACAGAT  Raphanus raphanistrum subsp. maritimus
FD980163       --> AAGAGAAAATGGAGAAAAAAGCTGAAGAACCACAAGTGAAAAAAACTGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD940474       --> AAGAGAAAATGGAGAAAAAAGCTGAAGAACCACAAGTGAAAAAACCTGAT  Raphanus sativus var. oleiformis
EY922432       --> AAGAGAAAATGGAGAAAAAAGCTGAAGAACCACAAGTGAAAAAACCTGAT  Raphanus raphanistrum subsp. landra
FD946680       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD536033       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               251    -    301
UN13989        --> GATAAGAAAGAAGAAGAGAAGAAGAAAGAGCCTCAAGAGATTGTTCTTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD529713       <-- GATAAGAAAGAAGAAGAGAAGAAGAAAGAGCTTCAAGAGATTGTTCTTAA
FD976099       <-- GATAAGAAAGAAGAAGAGAAGAAGAAAGAGCCTCAAGAGATTGTTCTTAA
FD960683       <-- GATAAGAAAGAAGAAGAGAAGAAGAAAGAGCCTCAAGAGATTGTTCTTAA
EX901017       <-- GATAAGAAAGAAGAAGAGAAGAAGAAAGAGCCTCAAGAGATTGTTCTTAA
EY918396       <-- ..................................................
FD533561       --> GATAAGAAAGAAGAAGAGAAGAAGAAAGAGCTTCAAGAGATTGTTCTTAA
FD964766       --> GATAAGAAAGAAGAAGAGAAGAAGAAAGAGCCTCAAGAGATTGTTCTTAA
FD980163       --> GATAAGAAAGAAGAAGAGAAGAAGAAAGAGCCTCAAGAGATTGTTCTTAA
FD940474       --> GATAAGAAAGAAGAAGAGAAGAAGAAAGAGCCTCAAGAGATTGCTCTTAA
EY922432       --> GATAAGAAAGAAGAAGAGAAGAAGAAAGAGCCTCAAGAGATTGTTCTTAA
FD946680       --> ..........................................GTTCTTAA
FD536033       --> ..................................................

               301    -    351
UN13989        --> GATCTTTATGCATTGTGAAGGTTGTGCTAAAAAGATTCATAGATGTCTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD529713       <-- GATCTTTATGCATTGTGAAGGTTGTGCTAAAAAGATCCATAGATGTCTTA  Raphanus raphanistrum subsp. maritimus
FD976099       <-- GATCTTTATGCATTGTGAAGGTTGTGCTAAAAAGATTCAAAGATGTCTTA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD960683       <-- GATCTTTATGCATTGTGAAGGTTGTGCTAAAAAGATCCATAGATGTCTTA  Raphanus raphanistrum subsp. maritimus
EX901017       <-- GATCTTTATGCATTGTGAAGGTTGTGCTAAAAAGATTCATAGATGTCTTA  Raphanus sativus cv Early Scarlet Globe
EY918396       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD533561       --> GATCTTTATGCATTGTGAAGGTTGTGCTAAAAAGATCCATAGATGTCTTA  Raphanus raphanistrum subsp. maritimus
FD964766       --> GATCTTTATGCATTGTGAAGGTTGTGCTAAAAAGATCCATAGATGTCTTA  Raphanus raphanistrum subsp. maritimus
FD980163       --> GATCTTTATGCATTGTGAAGGTTGTGCTAAAAAGATTCAAAGATGTCTTA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD940474       --> GATCTTTATGCATTGTGAAGGTTGTGCTAAAAAGATTCATAGATGTCTTA  Raphanus sativus var. oleiformis
EY922432       --> GATCTTTATGCATTGTGAAGGTTGTGCTAAAAAGATTCATAGATGTCTTA  Raphanus raphanistrum subsp. landra
FD946680       --> GATCTTTATGCATTGTGAAGGTTGTGCTAAAAAGATTCATAGATGTCTTA  Raphanus sativus cv Early Scarlet Globe
FD536033       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               351    -    401
UN13989        --> AAGGCTTTGAAGGAGTGGAGGATGTAACAACTGATTGTAAAACTAGTAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD529713       <-- AAGGCTTTGAAGGAGTGGAGGATGTAACAACTGATTGTAAAACTAGTAAA
FD976099       <-- AAGGCTTTGAAGGAGTGGAGGATGTAACAACTGATTGTAAAACTAGTAAA
FD960683       <-- AAGGCTTTGAAGGAGTGGAGGATGTAACAACTGATTGTAAAACTAGTAAA
EX901017       <-- AAGGCTTTGAAGGAGTGGAGGATGTAACAACTGATTGTAAAACTAGTAAA
EY918396       <-- ..................................................
FD533561       --> AAGGCTTTGAAGGAGTGGAGGATGTAACAACTGATTGTAAAACTAGTAAA
FD964766       --> AAGGCTTTGAAGGAGTGGAGGATGTAACAACTGATTGTAAAACTAGTAAA
FD980163       --> AAGGCTTTGAAGGAGTGGAGGATGTAACAACTGATTGTAAAACTAGTAAA
FD940474       --> AAGGCTTTGAAGGAGTGGAGGATGTAACAACTGATTGTAAAACTAGAAAA
EY922432       --> AAGTCTTTGAAGGAGTGGAGGATGTAACAACTGATTGTAAAACTAGTAAA
FD946680       --> AAGGCTTTGAAGGAGTGGAGGATGTAACAACTGATTGTAAAACTAGTAAA
FD536033       --> ..................................................

               401    -    451
UN13989        --> GTTGTGGTGAAAGGAGAGAAGGCAGATCCACTAAAAGTGTTGCAGAGATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD529713       <-- GTTGTGGTGAAAGGAGAGAAGGCAGATCCACTAAAAGTGTTGCAGAGATT
FD976099       <-- GTTGTGGTGAAAGGAGATAAGGCAGATCCACTAAAAGTGTTGCAGAGATT
FD960683       <-- GTTGTGGTGAAAGGAGAGAAGGCAGATCCACTAAAAGTGTTGCAGAGATT
EX901017       <-- GTTGTGGTGAAAGGAGAGAAGGCAGATCCACTAAAAGTGTTGCAGAGATT
EY918396       <-- ..................................................
FD533561       --> GTTGTGGTGAAAGGAGAGAAGGCAGATCCACTAAAAGTGTTGCAGAGATT
FD964766       --> GTTGTGGTGAAAGGAGAGAAGGCAGATCCACTAAAAGTGTTGCAGAGATT
FD980163       --> GTTGTGGTGAAAGGAGATAAGGCAGATCCACTAAAAGTGTTGCAGAGATT
FD940474       --> GTTGTGGTGAAAGGAGAGAAGGCAGATCCACTAAAAGTGTTGCAGAGATT
EY922432       --> GTTGTGGTGAAAGGAGAGAAGGCAGATCCACTAAAAGTGTTGCAGAGATT
FD946680       --> GTTGTGGTGAAAGGAGAGAAGGCAGATCCACTAAAAGTG...........
FD536033       --> ..................................................

               451    -    501
UN13989        --> GCAAAGAAAGAGCCACCGTCCAGTGGAGCTCCTTTCTCCTATTCCAGAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD529713       <-- GCAAAGAAAGAGCCACCGTCCAGTGGAGCTCCTTTCTCCTATTCCAGAGC
FD976099       <-- GCAAAGAAAGAGCCACCGTCCAGTGGAGCTCCTTTCTCCTATTCCAGAGC
FD960683       <-- GCAAAGAAAGAGCCACCGTCCAGTGGAGCTCCTTTCTCCTATTCCAGAGC
EX901017       <-- GCAAAGAAAGAGCCACCGTCCAGTGGACCTCCTTTCTCCTATCCCAGAGC
EY918396       <-- ..................................................
FD533561       --> GCAAAGAAAGAGCCACCGTCCAGTGGAGCTCCTTTCTCCTATTCCAGAGC
FD964766       --> GCAAAGAAAGAGCCACCGTCCAGTGGAGCTCCTTTCTCCTATTCCAGAGC
FD980163       --> GCAAAGAAAGAGCCACCGTCCAGTGGAGCTCCTTTCTCCTATTCCAGAGC
FD940474       --> GCAAAGAAAGAGCCACCGTCCAGTGGACCTCCTTTCTCCTATCCCAGAGC
EY922432       --> GCAAAGAAAGAGCCACCGTCCAGTGGAGCTCCTTTCTCCTATTCCAGAGC
FD946680       --> ..................................................
FD536033       --> .........GAGCCACCGTCCAGTGGAGCTCCTTTCTCCTATTCCAGAGC

               501    -    551
UN13989        --> CTAAACCGGTTTCAGATGAACCGGAGAAAAAGGAGGAGAAACCAAAACCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD529713       <-- CTAAACCGGTTTCAGATGAACCGGAGAAAAAGGAGGAGAAACCAAAACCT
FD976099       <-- CTAAACCGGTTTCAGATGAACCGGAGAAAAAGGAGGAGAAACCAAAACCT
FD960683       <-- CTAAACCGGTTTCAGATGAACCGGAGAAAAAGGAGGAGAAACCAAAACCT
EX901017       <-- CTAAACCGGTTTCAGATGAACCTGA-AAAAAGGAGGAGAAACCAAAACCT
EY918396       <-- .........................GAAAAAGGAGGAGAAACCAAAACCT
FD533561       --> CTAAACCGGTTTCAGATGAACCGGAGAAAAAGGAGGAGAAACCAAAACCT
FD964766       --> CTAAACCGGTTTCAGATGAACCG...........................
FD980163       --> CTAAACCGGTTTCAGATGAACCGGAGAAAAAGGAGGAGAAACCAAAACCT
FD940474       --> CTAAACCGGTTTCAGATGAACCTGAGAAAAAGGAGGAGAAACCAAAACCT
EY922432       --> CTAAACCGGTTTCAGATGAACCGGAGAAAAAGGAGGAGAAACCAAAACCT
FD946680       --> ..................................................
FD536033       --> CTAAACCGGTTTCAGATGAACCGGAGAAAAAGGAGGAGAAACCAAAACCT

               551    -    601
UN13989        --> CAAGAGAAAAAA-GAAGAG---GTAGTGACAGTGGTACTGAGAGTTCACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD529713       <-- CAAGAGAAAAAA-GAAGAG---GTAGTGACAGTGGTACTGAGTGTTCACA
FD976099       <-- CAAGAGAAAAAA-GAAGAG---GTAGTGACAGTGGTACTGAGAGTTCACA
FD960683       <-- CAAGAGAAAAAA-GAAGAG---GTAGTGACAGTGGTACTGAGTGTTCACA
EX901017       <-- CAAGAGAAAAAA-GAAGAG---GTAGTGACAGTGGTACTGAGAGTTCACA
EY918396       <-- CAAGAGAAAAAA-GAAGAG---GTAGTGACAGTGGTACTGAGAGTTCACA
FD533561       --> CAAGAGAAAAAA-GAAGAG---GTAGTGACAGTGGTACTGAGTGTTCACA
FD964766       --> ..................................................
FD980163       --> CAAGAGAAAAAA-GAAGAG---GTAGTGACAGTGGTACTGAGAGTTCACA
FD940474       --> CAAGAGAAAAAAAGAAGAG---GTAGTGACAGTGGTACTGAGAGTTCACA
EY922432       --> CAAGAGAAAAAA-GAAGAG---GTAGTGACAGTGGTACTGAGAGTTCACA
FD946680       --> ..................................................
FD536033       --> CAAGAAAAAAAA-GAAGAGCAGGTAGTGACAGTGGTACTGAGAGTTCACA

               601    -    651
UN13989        --> TGCATTGTGAAGCATGTGCCATGGAGATCCAAAAGAGAATCATGAGAATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD529713       <-- TGCATTGTGAAGCATGTGCCATGGAGATCCAAAAGAGAATCATGAGAATG
FD976099       <-- TGCATTGTGAAGCATGTGCCATGGAGATCCAAAAGAGAATCATGAGAATG
FD960683       <-- TGCATTGTGAAGCATGTGCCATGGAGATCCAAAAGAGAATCATGAGAATG
EX901017       <-- TGCATTGTGAAGCATGTGCCATGGAGATCCAAAAGAGAATCATGAGAATG
EY918396       <-- TGCATTGTGAAGCATGTGCCATGGAGATCCAAAAGAGAATCATGAGAATG
FD533561       --> TGCATTGTGAAGCATGTGCCATGGAGATCCAAAAGAGAATCATGAGAATG
FD964766       --> ..................................................
FD980163       --> TGCATTGTGAAGCATGTGCCATGGAGATCCAAAAGAGAATCATGAGAATG
FD940474       --> TGCATTGTGAAGCATGTGCCATGGAGATCCAAAAGAGAATCATGAGAATG
EY922432       --> TGCATTGTGAAGCATGTGCCATGGAGATCCAAAAGAGAATCATGAGAATG
FD946680       --> ..................................................
FD536033       --> TGCATTGTGAAGCATGTGCCATGGAGATCCAAAAGAGAATCATGAGAATG

               651    -    701
UN13989        --> AAAGGAGTGGAGTCTGTGGAACCAGATTTTAAAGCATCACAAGTGAGCGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD529713       <-- AAAGGAGTGGAGTCTGTGGAACCAGATTTTAAAGCATCACAAGTGAGCGT  Raphanus raphanistrum subsp. maritimus
FD976099       <-- AAAGGAGTGGAGTCTGTGGAACCAGATTTTAAAGCATCACAAGTGAGTGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD960683       <-- AAAGGAGTGGAGTCTGTGGAACCAGATTTTAAAGCATCACAAGTGAGCGT  Raphanus raphanistrum subsp. maritimus
EX901017       <-- AAAGGAGTGGAGTCTGTGGAACCAGATTTTAAAGCATCACAAGTGAGTGT  Raphanus sativus cv Early Scarlet Globe
EY918396       <-- AAAGGAGTGGAGTCTGTGGAACCAGATTTTAAAGCATCACAAGTGAGCGT  Raphanus raphanistrum subsp. landra
FD533561       --> AAAGGAGTGGAGTCTGTGGAACCAGATTTTAAAGCATCACAAGTGAGCGT  Raphanus raphanistrum subsp. maritimus
FD964766       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD980163       --> AAAGGAGTGGAGTCTGTGGAACCAGATTTTAAAGCATCACAAGTGAGTGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD940474       --> AAAGGAGTGGAGTCTGTGGAACCAGATTTTAAAGCATCACAAGTGAGTGT  Raphanus sativus var. oleiformis
EY922432       --> AAAGGAGTGGAGTCTGTGGAACCAGATTTTAAAGCATCACAAGTGAGCGT  Raphanus raphanistrum subsp. landra
FD946680       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD536033       --> AAAGGAGTGGAGTCTGTGGAACCAGATTTTAAAGCATCACAAGTGAGCGT  Raphanus raphanistrum subsp. maritimus

               701    -    751
UN13989        --> GAAAGGAGTTTTTACACCGGAAAAGCTAGTTGAGTACGTTAACAAGAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD529713       <-- GAAAGGAGTGTTTACACCGGAAAAGCTAGTTGAGTACGTCAACAAGAAAA
FD976099       <-- GAAAGGAGTTTTTACACCGGAAAAGCTAGTTGAGTACGTTAACAAGAAAA
FD960683       <-- GAAAGGAGTGTTTACACCGGAAAAGCTAGTTGAGTACGTCAACAAGAAAA
EX901017       <-- GAAAGGAGTTTTTACACCGGAAAAGCTAGTTGAGTACGTTAACAAGAAAA
EY918396       <-- GAAAGGAGTTTTTACACCGGAAAAGCTAGTTGAGTACGTTAACAAGAAAA
FD533561       --> GAAAGGAGTGTTTACACCGGAAAAGCTAGTTGAGTACGTCAACAAGAAA-
FD964766       --> ..................................................
FD980163       --> GAAAGGAGTTTTTACACCGGAAAAGCTAGTTGAGTACGTTAACAAGAAAA
FD940474       --> GAAAGGAGTTTTTACACCGGAGAAGCTAGTTGAGTACGTTAACAAGAAAA
EY922432       --> G.................................................
FD946680       --> ..................................................
FD536033       --> GAAAGGAGTTTTTACACCGGAAAAGCTAGTTGAGTACGTTAACAAGAAAA

               751    -    801
UN13989        --> TCGGGAAGCATGCTGCGGTTGTCAAGCAAGATCCGTCCCCAAAACC---G
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD529713       <-- TCGGGAAGCATGCTGCGCTTGTCAAGCAAGATCCGTCCCCAAAACCaccg
FD976099       <-- TCGGGAAGCATGCTGCGGTTGTCAATCAAGATCCGTCCCCAAAACCacc.
FD960683       <-- TCGGGAAGCATGCTGCGCTTGTCAAGCAAGATCCGTCCCCAAAACCaccg
EX901017       <-- TCGGGAAGCATGCTGCGGTTGTCAAGCAAGATCCGTCCCCAAAACCACCG
EY918396       <-- TCGGGAAGCATGCTGCGGTTGTCAAGCAAGATCCGTCCCCAAAACC---G
FD533561       --> TCGGGAAGCATGCTGCGCTTG.............................
FD964766       --> ..................................................
FD980163       --> TCGGGAAGCATGCTGCGGTTGTCAATCAAGATCCGTCCCCAAAccacc..
FD940474       --> TCGGGAAGCATGTTGCGGTTGTCAAGCAAGATCCGTCCCCA.........
EY922432       --> ..................................................
FD946680       --> ..................................................
FD536033       --> TCGGGAAGCATGCTGCGGTTGTCAAGCAAGATCCGTCCCCAAAACC---G

               801    -    851
UN13989        --> GAGAAAGAAAAAGAAACAAAAGACAAAGACAAAGACGAGAGGAAAAAGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD529713       <-- gag...............................................
FD976099       <-- ..................................................
FD960683       <-- gag...............................................
EX901017       <-- GAGAAAGAAGAAGAAACAAAAGACA------AAGACGAGAAGAAAAAGGA
EY918396       <-- GAGAAAGAAAAAGAAACAAAAGACAAAGACAAAGACGAGAAGAAAAAGGA
FD533561       --> ..................................................
FD964766       --> ..................................................
FD980163       --> ..................................................
FD940474       --> ..................................................
EY922432       --> ..................................................
FD946680       --> ..................................................
FD536033       --> GAGAAAGAAAAAGAAACAAAAGACAAAGACAAAGACGAGAGGAAAAAGGA

               851    -    901
UN13989        --> AGAGGAACAACCCAAAGAAAGTAAAGAGGCTAAGGAAGACGGTGGTGGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD529713       <-- ..................................................
FD976099       <-- ..................................................
FD960683       <-- ..................................................
EX901017       <-- AGAGGAACAACCC.....................................
EY918396       <-- AGAGGAACAACCCAAAGAAAGTAAAGAGGCTAAGGAAGACGGTGGTGGAG
FD533561       --> ..................................................
FD964766       --> ..................................................
FD980163       --> ..................................................
FD940474       --> ..................................................
EY922432       --> ..................................................
FD946680       --> ..................................................
FD536033       --> AGAGGAACAACCCAAAGAAAGTAAAGAGGCTAAGGAAGACGGTGGTGGAG

               901    -    951
UN13989        --> TGGCCAAATCGGCGGCCGGAGATGGGGGTGCTGCAGCGGGGGAAGGTGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD529713       <-- ..................................................
FD976099       <-- ..................................................
FD960683       <-- ..................................................
EX901017       <-- ..................................................
EY918396       <-- TGGCCAAATCGGCGGCCGGAGATGGGGGTGCTGCAGCGGGGGAAGGTGAC
FD533561       --> ..................................................
FD964766       --> ..................................................
FD980163       --> ..................................................
FD940474       --> ..................................................
EY922432       --> ..................................................
FD946680       --> ..................................................
FD536033       --> TGGCCAAATCGGCGGCCGGAGATGGGGGTGCTGCAGCGGGGGAAGGTGAC

               951    -   1001
UN13989        --> AAAGTGGTGGATTTAAAGAAGAATGAGTATCAATACCAGCCACCGAGGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD529713       <-- ..................................................
FD976099       <-- ..................................................
FD960683       <-- ..................................................
EX901017       <-- ..................................................
EY918396       <-- AAAGTGGTGGATTTAAAGAAGAATGAGTATCAATACCAGCCACCGAGGTA
FD533561       --> ..................................................
FD964766       --> ..................................................
FD980163       --> ..................................................
FD940474       --> ..................................................
EY922432       --> ..................................................
FD946680       --> ..................................................
FD536033       --> AAAGTGGTGGATTTAAAGAAGAATGAGTATCAATACCAGCCACCGAGGTA

               1001   -   1051
UN13989        --> TCCTGTGGAGATGTTTGCGTATCCACCACAGATATTCAGTGATGAGAACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD529713       <-- ..................................................
FD976099       <-- ..................................................
FD960683       <-- ..................................................
EX901017       <-- ..................................................
EY918396       <-- TCCTGTGGAGATGTTTGCGTATCCACCACAGATATTCAGTGATGAGAACC
FD533561       --> ..................................................
FD964766       --> ..................................................
FD980163       --> ..................................................
FD940474       --> ..................................................
EY922432       --> ..................................................
FD946680       --> ..................................................
FD536033       --> TCCTGTGGAGATGTTTGCGTATCCACCACAGATATTCAGTGATGAGAACC

               1051   -   1101
UN13989        --> CCAACGCTTGTACCATGATGTAGTAAATCGTTTGTTTAAGAAGTTACAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD529713       <-- ..................................................
FD976099       <-- ..................................................
FD960683       <-- ..................................................
EX901017       <-- ..................................................
EY918396       <-- CCAACGCTTGTACCATGATGTAGTAAATCGTTTGTTTAAGAAGTTACAAC
FD533561       --> ..................................................
FD964766       --> ..................................................
FD980163       --> ..................................................
FD940474       --> ..................................................
EY922432       --> ..................................................
FD946680       --> ..................................................
FD536033       --> CCAACGCTTGTACCATGATGTAGTAAATCGTTTGTTTAAGAAGTTACAAC

               1101   -   1151
UN13989        --> TTTTACTCTATTTATGTCGTTAAATGGATTTATTTATTTATTTCAAGCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD529713       <-- ..................................................
FD976099       <-- ..................................................
FD960683       <-- ..................................................
EX901017       <-- ..................................................
EY918396       <-- TTTTACTCTATTTATGTCGTTAAATGGATTTATTTATTTATTTCAAGCTA
FD533561       --> ..................................................
FD964766       --> ..................................................
FD980163       --> ..................................................
FD940474       --> ..................................................
EY922432       --> ..................................................
FD946680       --> ..................................................
FD536033       --> TTTTACTCTATTTATGTCGTTAAATGGATTTATTTATTTATTTCAAGCTA

               1151   -   1201
UN13989        --> ATTAGATGATCATATTCTTGTCAGTGTTGTACATAAACAAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD529713       <-- ..........................................
FD976099       <-- ..........................................
FD960683       <-- ..........................................
EX901017       <-- ..........................................
EY918396       <-- ATTAGATGATCATATTCTTGTt....................
FD533561       --> ..........................................
FD964766       --> ..........................................
FD980163       --> ..........................................
FD940474       --> ..........................................
EY922432       --> ..........................................
FD946680       --> ..........................................
FD536033       --> ATTAGATGATCATATTCTTGTCAGTGTTGTACATAAACAAGT