1      -     51
UN13990        --> GGATCCCAATCAACCCCACCAGATTTCGTCTCCTCGTCGTCTCAGGGATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV546110       <-- ..................ggAGATTTCGTCTCCTCGTCGTCTCAGGGATC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV571423       <-- ..................ggAGATTTCGTCTCCTCGTCGTCTCAGGGATC  Raphanus raphanistrum subsp. landra
EY910222       <-- ..................ggAGATTTCGTCTCCCCGTCGTCTCAGGGATC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW719404       <-- ............................TCTCCTCGTCGTCTCAGGGATA  Raphanus sativus var. oleiformis
EW730081       <-- ............................TCTCCTCGTCATCTCAGTGATC  Raphanus sativus cv Early Scarlet Globe
FD530342       <-- ...........................................AGGGATC  Raphanus raphanistrum subsp. maritimus
EY934227       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY927854       <-- ..................................................  Raphanus sativus var. oleiformis
EW715707       --> GGATCCCAATCAACCCAACCAGATTTCGTCTCCTCGTCGTCTCAGGGATA  Raphanus sativus var. oleiformis
EY930977       --> .....ggAATCAACCCCACCAGATTTCGTCTC---GTCGTCTCAGGGATA  Raphanus sativus var. oleiformis
EV550915       --> ..................ggAGATTTCGTCTCCTCGTCGTCTCAGGGATC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV566249       --> ..................ggAGATTTCGTCTCCTCGTCGTCTCAGGGATC  Raphanus raphanistrum subsp. landra
EW725637       --> ..................ggAGATTTCGTCTCCTCGTCATCTCAGTGATC  Raphanus sativus cv Early Scarlet Globe
EY913636       --> ..................ggAGATTTCGTCTCCTCGTCGTCTCAGGGATC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY914104       --> ..................ggAGATTTCGTCTCCTCGTCGTCTCAGGGATC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY914114       --> ..................ggAGATTTCGTCTCCCCGTCGTCTCAGGGATC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY938002       --> ..................ggAGATTTCGTCTCCTCGTCATCTCAGGGATC  Raphanus sativus cv Early Scarlet Globe
EY932040       --> ..............................ggCTCGTCGTCTCAGGGATA  Raphanus sativus var. oleiformis
EX764223       --> ...........................................AGGGATC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD534393       --> ...........................................AGGGATC  Raphanus raphanistrum subsp. maritimus
FD947626       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FY435967       --> ..................................................  Raphanus sativus cv GSK3-1
EW732446       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870

               51     -    101
UN13990        --> TAGAAGTGAGCGGAGAGAAGATGGCAGGCAAGGGAGGGAAAGGGCTCGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV546110       <-- TAGAAGTGAG-GGAGAGAAGATGGCAGGCAAGGGAGGGAAAGGGCTCGTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV571423       <-- TAGAAGTGAGCGGAGAGAAGATGGCAGGCAAGGGAGGGAAAGGGCTCGTA  Raphanus raphanistrum subsp. landra
EY910222       <-- TAGAAGTGAGCGGAGAGAAGATGGCAGGCAAGGGAGGGAAAGGGCTCGTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW719404       <-- TAGAAGTGAGCGGAGAGAAGATGGCAGGCAAGGGAGGGAAAGGGCTCGTA  Raphanus sativus var. oleiformis
EW730081       <-- TAGAAGTGAGCGGAGAGAAGATGGCAGGCAAGGGAGGGAAAGGGCTCGTA  Raphanus sativus cv Early Scarlet Globe
FD530342       <-- TAGAAGTGAG-GGAGAGAAGATGGCAGGCAAGGGAGGGAAAGGGCTCGTA  Raphanus raphanistrum subsp. maritimus
EY934227       <-- ................GAAGATGGCAGGCAAGGGAGGGAAAGGGCTCGTA  Raphanus sativus cv Early Scarlet Globe
EY927854       <-- ..................................................  Raphanus sativus var. oleiformis
EW715707       --> TAGAAGTGAGCGGAGAGAAGATGGCAGGCAAGGGAGGGAAAGGGCTCGTA  Raphanus sativus var. oleiformis
EY930977       --> TAGAAGTGAGCGGAGAGAAGATGGCAGGCAAGGGAGGGAAAGGGCTCGTA  Raphanus sativus var. oleiformis
EV550915       --> TAGAAGTGAG-GGAGAGAAGATGGCAGGCAAGGGAGGGAAAGGGCTCGTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV566249       --> TAGAAGTGAGCGGAGAGAAGATGGCAGGCAAGGGAGGGAAAGGGCTCGTA  Raphanus raphanistrum subsp. landra
EW725637       --> TAGAAGTGAGCGGAGAGAAGATGGCAGGCAAGGGAGGGAAAGGGCTCGTA  Raphanus sativus cv Early Scarlet Globe
EY913636       --> TAGAAGTGAG-GGAGAGAAGATGGCAGGCAAGGGAGGGAAAGGGCTCGTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY914104       --> TAGAAGTGAGCGGAGAGAAGATGGCAGGCAAGGGAGGGAAAGGGCTCGTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY914114       --> TAGAAGTGAGCGGAGAGAAGATGGCAGGCAAGGGAGGGAAAGGGCTCGTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY938002       --> TAGAAGTGAGCGGAGAGAAGATGGCAGGCAAGGGAGGGAAAGGGCTCGTA  Raphanus sativus cv Early Scarlet Globe
EY932040       --> TAGAAGTGAGCGGAGAGAAGATGGCAGGCAAGGGAGGGAAAGGGCTCGTA  Raphanus sativus var. oleiformis
EX764223       --> TAGAAGTGAG-GGAGAGAAGATGGCAGGCAAGGGAGGGAAAGGGCTCGTA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD534393       --> TAGAAGTGAG-GGAGAGAAGATGGCAGGCAAGGGAGGGAAAGGGCTCGTA  Raphanus raphanistrum subsp. maritimus
FD947626       --> ..............GAGAAGATGGCAGGCAAGGGAGGGAAAGGGCTCGTA  Raphanus sativus cv Early Scarlet Globe
FY435967       --> ........................................AGGGCTCGTA  Raphanus sativus cv GSK3-1
EW732446       --> ...............................................GTA  Raphanus sativus cv Rat-Tail Radish #3870

               101    -    151
UN13990        --> GCTGCAAAGACGATGGCTTCTAACAAGGACAAAGACAAGGGCAAGATGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV546110       <-- GCTGCAAAGACGATGGCTTCTAACAAGGACAAAGACAAGGGCAAGATGAA
EV571423       <-- GCTGCAAAGACGATGGCTTCTAACAAGGACAAAGACAAGGGCAAGATGAA
EY910222       <-- GCTGCAAAGACGATGGCTTCTAACAAGGACAAAGACAAGGGCAAGATGAA
EW719404       <-- GCTGCAAAGACGATGGCTTCTAACAAGGACAAAGACAAGGGCAAGATGAA
EW730081       <-- GCTGCAAAGACGATGGCTTCTAACAAGGACAAAGACAAGGGCAAGATGAA
FD530342       <-- GCTGCAAAGACGATGGCTTCTAACAAGGACAAAGACAAGGGCAAGATGAA
EY934227       <-- GCTGCAAAGACGATGGCTTCTAACAAGGACAAAGACAAGGGCAAGATGAA
EY927854       <-- ...............GCTTCTAACAAGGACAAAGACAAGGGCAAGATGAA
EW715707       --> GCTGCAAAGACGATGGCTTCTAACAAGGACAAAGACAAGGGCAAGATGAA
EY930977       --> GCTGCAAAGACGATGGCTTCTAACAAGGACAAAGACAAGGGCAAGATGAA
EV550915       --> GCTGCAAAGACGATGGCTTCTAACAAGGACAAAGACAAGGGCAAGATGAA
EV566249       --> GCTGCAAAGACGATGGCTTCTAACAAGGACAAAGACAAGGGCAAGATGAA
EW725637       --> GCTGCAAAGACGATGGCTTCTAACAAGGACAAAGACAAGGGCAAGATGAA
EY913636       --> GCTGCAAAGACGATGGCTTCTAACAAGGACAAAGACAAGGGCAAGATGAA
EY914104       --> GCTGCAAAGACGATGGCTTCTAACAAGGACAAAGACAAGGGCAAGATGAA
EY914114       --> GCTGCAAAGACGATGGCTTCTAACAAGGACAAAGACAAGGGCAAGATGAA
EY938002       --> GCTGCAAAGACGATGGCTTCTAACAAGGACAAAGACAAGGGCAAGATGAA
EY932040       --> GCTGCAAAGACGATGGCTTCTAACAAGGACAAAGACAAGGGCAAGATGAA
EX764223       --> GCTGCAAAGACGATGGCTTCTAACAAGGACAAAGACAAGGGCAAGATGAA
FD534393       --> GCTGCAAAGACGATGGCTTCTAACAAGGACAAAGACAAGGGCAAGATGAA
FD947626       --> GCTGCAAAGACGATGGCTTCTAACAAGGACAAAGACAAGGGCAAGATGAA
FY435967       --> GCTGCAA-GACGATGGCTTCTAACAAGGACAAAGACAAGGGCAAGATGAA
EW732446       --> GCTGCAAAGACGATGGCTTCTAACAAGGACAAAGACAAGGGCAAGATGAA

               151    -    201
UN13990        --> ACCCATCTCTCGATCTGCTCGTGCCGGTATTCAGTTTCCAGTGGGTCGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV546110       <-- ACCCATCTCTCGATCTGCTCGTGCCGGTATTCAGTTTCCAGTGGGTCGTA
EV571423       <-- ACCCATCTCTCGATCTTCTCGTGCCGGTATTCAGTTTCCAGTGGGTCGTA
EY910222       <-- ACCCATCTCTCGATCTGCTCGTGCCGGTATTCAGTTTCCAGTGGGTGGTA
EW719404       <-- ACCCATCTCTCGATCTGCTCGTGCCGGTATTCAGTTTCCAGTGGGTCATA
EW730081       <-- ACCCATCTCCCGATCTGCTCGTGCCGGTATTCAGTTTCCAGTGGGTCGTA
FD530342       <-- ACCCATCTCTCGATCTGCTTGTGCCGGTATTCAGTTTCCAGTGGGTCGTA
EY934227       <-- ACCCATCTCTCGATCTGCTCGTGCCGGTATTCAGTTTCCAGTGGGTCGTA
EY927854       <-- ACCCATCTCTCGATCTGCCCGTGCCGGTATTCAGTTTCCAGTAGGTCGTA
EW715707       --> ACCCATCTCTCGATCTGCTCGTGCCGGTATTCAGTTTCCAGTGGGTCATA
EY930977       --> ACCCATCTCTCGATCTGCTCGTGCCGGTATTCAGTTTCCAGTGGGTCGTA
EV550915       --> ACCCATCTCTCGATCTGCTCGTGCCGGTATTCAGTTTCCAGTGGGTCGTA
EV566249       --> ACCCATCTCTCGATCTTCTCGTGCCGGTATTCAGTTTCCAGTGGGTCGTA
EW725637       --> ACCCATCTCCCGATCTGCTCGTGCCGGTATTCAGTTTCCAGTGGGTCGTA
EY913636       --> ACCCATCTCTCGATCTGCTCGTGCCGGTATTCAGTTTCCAGTGGGTCGTA
EY914104       --> ACCCATCTCTCGATCTGCTCGTGCCGGTATTCAGTTTCCAGTGGGTCGTA
EY914114       --> ACCCATCTCTCGATCTGCTCGTGCCGGTATTCAGTTTCCAGTGGGTCGTA
EY938002       --> ACCCATCTCTCGATCTGCTCGTGCCGGTATTCAGTTTCCAGTGGGTCGTA
EY932040       --> ACCCATCTCTCGATCTGCCCGTGCCGGTATTCAGTTTCCAGTAGGTCGTA
EX764223       --> ACCCATCTCTCGATCTGCTCGTGCCGGTATTCAGTTTCCAGTGGGTCGTA
FD534393       --> ACCCATCTCTCGATCTGCTTGTGCCGGTATTCAGTTTCCAGTGGGTCGTA
FD947626       --> ACCCATCTCTCGATCTGCTCGTGCCGGTATTCAGTTTCCAGTGGGTCGTA
FY435967       --> ACCCATCTCTCGATCTGCTCGTGCCGGTATTCAGTTTCCAGTGGGTCGTA
EW732446       --> ACCCATCTCTCGATCTGCTCGTGCCGGTATTCAGTTTCCAGTGGGTCGTA

               201    -    251
UN13990        --> TCCATAGGCAACTCAAGACCAGGGTTTCAGCACACGGAAGAGTTGGTGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV546110       <-- TCCATAGGCAACTCAAGACTAGGGCTTCAGCACACGGAAGAGTTGGTGCC
EV571423       <-- TCCATAGGCAACTCAAGACCAGGGCTTCAGCACACGGAAGAGTTGGTGCC
EY910222       <-- TCCATAGGCAACTCAAGACCAGGGTTTCAGCACACGGAAGAGTTGGTGCC
EW719404       <-- TCCATAGGCAACTCAAGACCAGGGTTTCAGCACACGGAAGAGTTGGTGCC
EW730081       <-- TCCATAGGCAACTCAAGACCAGGGTTTCAGCACACGGAAGAGTTGGTGCC
FD530342       <-- TCCATAGGCAACTCAAGACCAGGGTTTCAGCACACGGAAGAGTTGGTGCC
EY934227       <-- TCCATAGGCAACTCAAGACCAGGGTTTCGGCACACGGAAGAGTTGGTGCC
EY927854       <-- TCCATAGGCAACTCAAGACCAGGGTTTCAGCACACGGAAGAGTTGGTGCC
EW715707       --> TCCATAGGCAACTCAAGACCAGGGTTTCAGCACACGGAAGAGTTGGTGCC
EY930977       --> TCCATAGGCAACTCAAGACCAGGGTTTCAGCACACGGAAGAGTTGGTGCC
EV550915       --> TCCATAGGCAACTCAAGACTAGGGCTTCAGCACACGGAAGAGTTGGTGCC
EV566249       --> TCCATAGGCAACTCAAGACCAGGGCTTCAGCACACGGAAGAGTTGGTGCC
EW725637       --> TCCATAGGCAACTCAAGACCAGGGTTTCAGCACACGGAAGAGTTGGTGCC
EY913636       --> TCCATAGGCAACTCAAGACCAGGGTTTCAGCACACGGAAGAGTTGGTGCC
EY914104       --> TCCATAGGCAACTCAAGACCAGGGTTTCAGCACACGGAAGAGTTGGTGCC
EY914114       --> TCCATAGGCAACTCAAGACCAGGGTTTCAGCACACGGAAGAGTTGGTGCC
EY938002       --> TCCATAGGCAACTCAAGACCAGGGTTTCGGCACACGGAAGAGTTGGTGCC
EY932040       --> TCCATAGGCAACTCAAGACCAGGGTTTCAGCACACGGAAGAGTTGGTGCC
EX764223       --> TCCATAGGCAACTCAAGACCAGGGTTTCAGTACACGGAAGAGTTGGTGCC
FD534393       --> TCCATAGGCAACTCAAGACCAGGGTTTCAGCACACGGAAGAGTTGGTGCC
FD947626       --> TCCATAGGCAACTCAAGACCAGGGTTTCAGCACACGGAAGAGTTGGTGCC
FY435967       --> TCCATAGGCAACTCAAGACCAGGGTTTCAGCACACGGAAGAGTTGGTGCC
EW732446       --> TCCATAGGCAACTCAAGACCAGGGTTTCAGCACACGGAAGAGTTGGTGCC

               251    -    301
UN13990        --> ACTGCTGCTGTTTACACTGCTTCGATTCTGGAGTACTTGACTGCAGAAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV546110       <-- ACTGCTGCTGTTTACACTGCTTCGATTCTGGAGTACTTGACTGCAGAAGT
EV571423       <-- ACTGCTGCTGTTTACACTGCTTCGATTCTGGAGTACTTGACTGCAGAAGT
EY910222       <-- ACTGCTGCTGTTTACACTGCTTCAATTCTGGAGTACTTGACTGCAGAAGT
EW719404       <-- ACTGCTGCTGTTTACACTGCTTCGATTCTGGAGTACTTGACTGCAGAAGT
EW730081       <-- ACTGCTGCTGTTTACACTGCTTCGATTCTGGAGTACTTGACTGCAGAAGT
FD530342       <-- ACTGCTGCTGTTTACACTGCTTCGATTCTGGAGTACTTGACTGCAGAAGT
EY934227       <-- ACTGCTGCTGTTTACACTGCTTCGACTCTGGAGTACTTGACTGCAGAAGT
EY927854       <-- ACTGCTGCTGTTTACACTGCTTCGATTCTGGAGTACTTGACTGCAGAAGT
EW715707       --> ACTGCTGCTGTTTACACTGCTTCGATTCTGGAGTACTTGACTGCAGAAGT
EY930977       --> ACTGCTGCTGTTTACACTGCTTCGATTCTGGAGTACTTGACTGCAGAAGT
EV550915       --> ACTGCTGCTGTTTACACTGCTTCGATTCTGGAGTACTTGACTGCAGAAGT
EV566249       --> ACTGCTGCTGTTTACACTGCTTCGATTCTGGAGTACTTGACTGCAGAAGT
EW725637       --> ACTGCTGCTGTTTACACTGCTTCGATTCTGGAGTACTTGACTGCAGAAGT
EY913636       --> ACTGCTGCTGTTTACACTGCTTCGATTCTGGAGTACTTGACTGCAGAAGT
EY914104       --> ACTGCTGCTGTTTACACTGCTTCAATTCTGGAGTACTTGACTGCAGAAGT
EY914114       --> ACTGCTGCTGTTTACACTGCTTCAATTCTGGAGTACTTGACTGCAGAAGT
EY938002       --> ACTGCTGCTGTTTACACTGCTTCGACTCTGGAGTACTTGACTGCAGAAGT
EY932040       --> ACTGCTGCTGTTTACACTGCTTCGATTCTGGAGTACTTGACTGCAGAAGT
EX764223       --> ACTGCTGCTGTTTACACTGCTTCGATTCTGGAGTACTTGACTGCAGAAGC
FD534393       --> ACTGCTGCTGTTTACACTGCTTCGATTCTGGAGTACTTGACTGCAGAAGT
FD947626       --> ACTGCTGCTGTTTACACTGCTTCGATTCTGGAGTACTTGACTGCAGAAGT
FY435967       --> ACTGCTGCTGTTTACACTGCTTCAATTCTGGAGTACTTGACTGCAGAAGT
EW732446       --> ACTGCTGCTGTTTACACTGCTTCAATTCTGGAGTACTTGACTGCAGAAGT

               301    -    351
UN13990        --> TCTTGAGTTAGCTGGAAACGCAAGCAAAGATCTGAAAGTGAAGAGGATAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV546110       <-- TCTTGAGTTAGCTGGAAACGCAAGCAAGGATCTGAAAGTGAAGAGGATAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV571423       <-- TCTTGAGTTAGCTGGAAACGCAAGCAAAGATCTGAAAGTGAAGAGGATAA  Raphanus raphanistrum subsp. landra
EY910222       <-- TCTTGAGTTAGCTGGAAACGCAAGCAAAGATCTGAAAGTGAAGAGGATAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW719404       <-- TCTCGAGTTAGCTGGAAACGCAAGCAAGGATTTGAAAGTGAAGAGGATAA  Raphanus sativus var. oleiformis
EW730081       <-- TCTTGAGTTAGCTGGAAACGCAAGCAAAGATCTGAAAGTGAAGAGGATAA  Raphanus sativus cv Early Scarlet Globe
FD530342       <-- TCTTGAGTTAGCCGGAAACGCAAGCAAAGATCTGAAAGTGAAGAGGATAA  Raphanus raphanistrum subsp. maritimus
EY934227       <-- TCTTGAGTTAGCTGGAAACGCAAGCAAAGATCTGAAAGTGAAGAGGATAA  Raphanus sativus cv Early Scarlet Globe
EY927854       <-- TCTTGAGTTAGCTGGAAACGCAAGCAAGGATCTGAAAGTGAAGAGGATAA  Raphanus sativus var. oleiformis
EW715707       --> TCTCGAGTTAGCTGGAAACGCAAGCAAGGATCTGAAAGTGAAGAGGATAA  Raphanus sativus var. oleiformis
EY930977       --> TCTTGAGTTAGCTGGAAACGCAAGCAAGGATCTGAAAGTGAAGAGGATAA  Raphanus sativus var. oleiformis
EV550915       --> TCTTGAGTTAGCTGGAAACGCAAGCAAGGATCTGAAAGTGAAGAGGATAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV566249       --> TCTTGAGTTAGCTGGAAACGCAAGCAAAGATCTGAAAGTGAAGAGGATAA  Raphanus raphanistrum subsp. landra
EW725637       --> TCTTGAGTTAGCTGGAAACGCAAGCAAAGATCTGAAAGTGAAGAGGATAA  Raphanus sativus cv Early Scarlet Globe
EY913636       --> TCTTGAGTTAGCTGGAAACGCAAGCAAGGATCTGAAAGTGAAGAGGATAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY914104       --> TCTTGAGTTAGCTGGAAACGCAAGCAAAGATCTGAAAGTGAAGAGGATAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY914114       --> TCTTGAGTTAGCTGGAAACGCAAGCAAAGATCTGAAAGTGAAGAGGATAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY938002       --> TCTTGAGTTAGCTGGAAACGCAAGCAAAGATCTGAAAGTGAAGAGGATAA  Raphanus sativus cv Early Scarlet Globe
EY932040       --> TCTTGAGTTAGCTGGAAACGCAAGCAAGGATCTGAAAGTGAAGAGGATAA  Raphanus sativus var. oleiformis
EX764223       --> TCTTGAGTTAGCTGGAAACGCAAGCAAAGATCTGAAAGTGAAGAGGATAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD534393       --> TCTTGAGTTAGCCGGAAACGCAAGCAAAGATCTGAAAGTGAAGAGGATAA  Raphanus raphanistrum subsp. maritimus
FD947626       --> TCTTGAGTTAGCTGGAAACGCAAGCAAAGATCTGAAAGTGAAGAGGATAA  Raphanus sativus cv Early Scarlet Globe
FY435967       --> TCTTGAGTTAGCTGGAAACGCAAGCAAGGATCTGAAAGTGAAGAGGATAA  Raphanus sativus cv GSK3-1
EW732446       --> TCTTGAGTTAGCTGGAAACGCAAGCAAGGATCTGAAAGTGAAGAGGATAA  Raphanus sativus cv Rat-Tail Radish #3870

               351    -    401
UN13990        --> CTCCAAGGCATTTGCAGTTGGCAATCAGAGGAGACGAGGAGCTTGACACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV546110       <-- CTCCTAGGCATTTGCAGTTGGCAATCAGAGGAGATGAGGAGCTTGACACG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV571423       <-- CTCCAAGGCATTTGCAGTTGGCAATCAGAGGAGACGAGGAGCTTGACACG  Raphanus raphanistrum subsp. landra
EY910222       <-- CTCCAAGGCATTTGCAGTTGGCAATCAGAGGAGACGAGGAGCTTGACACG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW719404       <-- CTCCAAGGCATTTGCAGTTGGCTATCAGAGGAGATGAGGAGCTTGACACG  Raphanus sativus var. oleiformis
EW730081       <-- CTCCAAGGCATCTGCAGTTGGCAATCAGAGGAGACGAGGAGCTTGACACG  Raphanus sativus cv Early Scarlet Globe
FD530342       <-- CTCCAAGGCATTTGCAGTTGGCAATCAGAGGAGACGAGGAGCTTGACACG  Raphanus raphanistrum subsp. maritimus
EY934227       <-- CTCCAAGGCATCTGCAGTTGGCAATCAGAGGAGACGAGGAGCTTGACACG  Raphanus sativus cv Early Scarlet Globe
EY927854       <-- CTCCAAGGCATTTGCAGTTGGCTATCAGAGGAGATGAGGAGCTTGACACG  Raphanus sativus var. oleiformis
EW715707       --> CTCCAAGGCATTTGCAGTTGGCTATCAGAGGAGATGAGGAGCTTGACACG  Raphanus sativus var. oleiformis
EY930977       --> CTCCAGGGCATTTGCAGTTGGCTATCAGAGGAGATGAGGAGCTTGACACG  Raphanus sativus var. oleiformis
EV550915       --> CTCCTAGGCATTTGCAGTTGGCAATCAGAGGAGATGAGGAGCTTGACACG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV566249       --> CTCCAAGGCATTTGCAGTTGGCAATCAGAGGAGACGAGGAGCTTGACACG  Raphanus raphanistrum subsp. landra
EW725637       --> CTCCAAGGCATCTGCAGTTGGCAATCAGAGGAGACGAGGAGCTTGACACG  Raphanus sativus cv Early Scarlet Globe
EY913636       --> CTCCTAGGCATTTGCAGTTGGCAATCAGAGGAGATGAGGAGCTTGACACG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY914104       --> CTCCAAGGCATTTGCAGTTGGCAATCAGAGGAGACGAGGAGCTTGACACG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY914114       --> CTCCAAGGCATTTGCAGTTGGCAATCAGAGGAGACGAGGAGCTTGACACG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY938002       --> CTCCAAGGCATCTGCAGTTGGCAATCAGAGGAGACGAGGAGCTTGACACG  Raphanus sativus cv Early Scarlet Globe
EY932040       --> CTCCAAGGCATTTGCAGTTGGCTATCAGAGGAGATGAGGAGCTTGACACG  Raphanus sativus var. oleiformis
EX764223       --> CTCCAAGGCATTTGCAGTTGGCAATCAGAGGAGACGAGGAGCTTGACACG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD534393       --> CTCCAAGGCATTTGCAGTTGGCAATCAGAGGAGACGAGGAGCTTGACACG  Raphanus raphanistrum subsp. maritimus
FD947626       --> CTCCAAGGCATCTGCAGTTGGCAATCAGAGGAGACGAGGAGCTTGACACG  Raphanus sativus cv Early Scarlet Globe
FY435967       --> CTCCAAGGCATTTGCAGTTGGCAATCAGAGGAGATGAGGAGCTTGACACG  Raphanus sativus cv GSK3-1
EW732446       --> CTCCAAGGCATTTGCAGTTGGCAATCAGAGGAGATGAGGAGCTTGACACG  Raphanus sativus cv Rat-Tail Radish #3870

               401    -    451
UN13990        --> CTCATCAAAGGAACCATTGCCGGAG-GTGGTGTGATCCCTCACATCCACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV546110       <-- CTCATCAAAGGAACCATTGCCGGAG-GTGGTGTGATCCCTCACATCCACA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV571423       <-- CTCATCAAAGGAACCATTGCCGGAG-GTGGTGTCATCCCTCACATCCACA  Raphanus raphanistrum subsp. landra
EY910222       <-- CTCATCAAAGGAACCATTGCCGGAG-GTGGTGTCATCCCTCACATCCACA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW719404       <-- CTCATCAA-GGAACCATTGCCGGAG-GTGGTGTGATCCCTCACATCCACA  Raphanus sativus var. oleiformis
EW730081       <-- CTCATCAAAGGAACCATTGCCGGAG-GTGGTGTGATCCCTCACATCCACA  Raphanus sativus cv Early Scarlet Globe
FD530342       <-- CTCATCAAAGGAACCATTGCCGGAG-GTGGTGTCATCCCTCACATCCACA  Raphanus raphanistrum subsp. maritimus
EY934227       <-- CTCATCAAAGGAACCATTGCCGGAG-GTGGTGTGATCCCTCACATCCACA  Raphanus sativus cv Early Scarlet Globe
EY927854       <-- CTCATCAAAGGAACCATTGCCGGAG--TGGTGTGATCCCTCACATCCACA  Raphanus sativus var. oleiformis
EW715707       --> CTCATCAA-GGAACCATTGCCGGAG-GTGGTGTGATCCCTCACATCCACA  Raphanus sativus var. oleiformis
EY930977       --> CTCATCAAAGGAACCATTGCCGGAG-GTGGTGTGATTCCTCACATCCACA  Raphanus sativus var. oleiformis
EV550915       --> CTCATCAAAGGAACCATTGCCGGAG-GTGGTGTGATCCCTCACATCCACA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV566249       --> CTCATCAAAGGAACCATTGCCGGAG-GTGGTGTCATCCCTCACATCCACA  Raphanus raphanistrum subsp. landra
EW725637       --> CTCATCAAAGGAACCATTGCCGGAG-GTGGTGTGATCCCTCACATCCACA  Raphanus sativus cv Early Scarlet Globe
EY913636       --> CTCATCAAAGGAACCATTGCCGGAG-GTGGTGTGATCCCTCACATCCACA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY914104       --> CTCATCAAAGGAACCATTGCCGGAG-GTGGTGTCATCCCTCACATCCACA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY914114       --> CTCATCAAAGGAACCATTGCCGGAG-GTGGTGTCATCCCTCACATCCACA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY938002       --> CTCATCAAAGGAACCATTGCCGGAG-GTGGTGTGATCCCTCACATCCACA  Raphanus sativus cv Early Scarlet Globe
EY932040       --> CTCATCAAAGGAACCATTGCCGGAG--TGGTGTGATCCCTCACATCCACA  Raphanus sativus var. oleiformis
EX764223       --> CTCATCAAAGGAACCATTGCCGGAG-GTGGTGTCATCCCTCACATCCACA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD534393       --> CTCATCAAAGGAACCATTGCCGGAG-GTGGTGTCATCCCTCACATCCACA  Raphanus raphanistrum subsp. maritimus
FD947626       --> CTCATCAAAGGAACCATTGCCGGAG-GTGGTGTGATCCCTCACATCCACA  Raphanus sativus cv Early Scarlet Globe
FY435967       --> CTCATCAAAGGAACCATTGCCGGAG-GTGGTGTCATCCCTCACATCCACA  Raphanus sativus cv GSK3-1
EW732446       --> CTCATCAAAGGAACCATTGCCGGAGAGTGGTGTCATCCCTCACATCCACA  Raphanus sativus cv Rat-Tail Radish #3870

               451    -    501
UN13990        --> AGTCTCTCATCAACAAAACCACCACTGAGTGATTTGTTGTTAAAGTGATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV546110       <-- AGTCTCTCATCAACAAAACCACCACTGAGTGATTTGTTGTTAACGTGATC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV571423       <-- AGTCTCTCATCAACAAAACCACCACTGAGTGATTTGTTGTTAAAGTGATC  Raphanus raphanistrum subsp. landra
EY910222       <-- AGTCTCTCATCAACAAAACCACCACTGAGTGATTTGTTGTTAAAGTGATC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW719404       <-- AGTCTCTCATCAACAAAACCACCACTGAGTGATTTGTTGTTAGAGTGATC  Raphanus sativus var. oleiformis
EW730081       <-- AGTCTCTCATCAACAAAACCACCACCGAGTGATTTGTTGTTAAAGTGATC  Raphanus sativus cv Early Scarlet Globe
FD530342       <-- AGTCTCTCATCAACAAAACCACCACTGAGTGATTTGTTGTTAAAGTGATC  Raphanus raphanistrum subsp. maritimus
EY934227       <-- AGTCTCTCATCAACAAAACCACCACCGAGTGATTTGTTGTTAAAGTGATC  Raphanus sativus cv Early Scarlet Globe
EY927854       <-- AGTCTCTCATCAACAAAACCACCACTGAGTGATTTGTTGTTAAAGTGATC  Raphanus sativus var. oleiformis
EW715707       --> AGTCTCTCATCAACAAAACCACCACTGAGTGATTTGTTGTTAGAGTGATC  Raphanus sativus var. oleiformis
EY930977       --> AGTCTCTCATCAACAAAACCACCACTGAGTGATTTTTTGTTAAAGTGATC  Raphanus sativus var. oleiformis
EV550915       --> AGTCTCTCATCAACAAAACCACCACTGAGTGATTTGTTGTTAACGTGATC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV566249       --> AGTCTCTCATCAACAAAACCACCACTGAGTGATTTGTTGTTAAAGTGATC  Raphanus raphanistrum subsp. landra
EW725637       --> AGTCTCTCATCAACAAAACCACCACCGAGTGATTTGTTGTTAAAGTGATC  Raphanus sativus cv Early Scarlet Globe
EY913636       --> AGTCTCTCATCAACAAAACCACCACTGAGTGATTTGTTGTTAACGTGATC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY914104       --> AGTCTCTCATCAACAAAACCACCACTGAGTGATTTGTTGTTAAAGTGATC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY914114       --> AGTCTCTCATCAACAAAACCACCACTGAGTGATTTGTTGTTAAAGTGATC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY938002       --> AGTCTCTCATCAACAAAACCACCACCGAGTGATTTGTTGTTAAAGTGATC  Raphanus sativus cv Early Scarlet Globe
EY932040       --> AGTCTCTCATCAACAAAACCACCACTGAGTGATTTGTTGTTAAAGTGATC  Raphanus sativus var. oleiformis
EX764223       --> AGTCTCTCATCAACAAAACCACCACTGAGTGATTTGTTGTTAAAGTGATC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD534393       --> AGTCTCTCATCAACAAAACCACCACTGAGTGATTTGTTGTTAAAGTGATC  Raphanus raphanistrum subsp. maritimus
FD947626       --> AGTCTCTCATCAACAAAACCACCACCGAGTGATTTGTTGTTAAAGTGATC  Raphanus sativus cv Early Scarlet Globe
FY435967       --> AGTCTCTCATCAACAAAACCACCACTGAGTGATTTGTTGTTAAAGTGATC  Raphanus sativus cv GSK3-1
EW732446       --> AGTCTCTCATCAACAAAACCACCACTGAGTGATTTGTTGTTAAAGTGATC  Raphanus sativus cv Rat-Tail Radish #3870

               501    -    551
UN13990        --> TT-GCTAGTTAGTTGCTCATCGTGTGTTGGTGTTTTGTTAACGTCTTGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV546110       <-- TT-GCTAGTTAGTAGCTCATCGTGTGTTGGTGTTTTGTTAACGTCTTGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV571423       <-- TTTGCTAGTTAGTTGCTCATCGTGTGTTGGTGTTTTGTTAACGTCTTGAA  Raphanus raphanistrum subsp. landra
EY910222       <-- TT-GCTAGTTAGTTGCTCATCGTGTGTTGGTGTTTTGTTAACGTCTTGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW719404       <-- TT-GCTAGTTAGTTGCTCATCGTGTGTTGGTGTTTTGTTAACGTCTTGAA  Raphanus sativus var. oleiformis
EW730081       <-- TT-GCTAGTTAGTTGCTCATCGTGTGTTGGTGTTTTGTTAACGTCTTGAA  Raphanus sativus cv Early Scarlet Globe
FD530342       <-- TTTGCTAGTTAGTTGCTCATCGTGTGTTGGTGTTTTGTTAACGTCTTGAA  Raphanus raphanistrum subsp. maritimus
EY934227       <-- TT-GCTAGTTAGTTGCTCATCGTGTGTTGGTGTTTTGTTAACGTCTTGAA  Raphanus sativus cv Early Scarlet Globe
EY927854       <-- TT-GCTAGTTAGCTGCTCATCGTGTGTTGGTGTTTTGTTAACGTCTTGAA  Raphanus sativus var. oleiformis
EW715707       --> TT-GCTAGTTAGTTGCTCATCGTGTGTTGGTGTTTTGTTAACGTCTTGAA  Raphanus sativus var. oleiformis
EY930977       --> TT-GCTAGTTAGTTGCTCATCGTGTGTTGGTGTTTTGTTAACGTCTTGAA  Raphanus sativus var. oleiformis
EV550915       --> TT-GCTAGTTAGTAGCTCATCGTGTGTTGGTGTTTTGTTAACGTCTTGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV566249       --> TTTGCTAGTTAGTTGCTCATCGTGTGTTGGTGTTTTGTTAACGTCTTGAA  Raphanus raphanistrum subsp. landra
EW725637       --> TT-GCTAGTTAGTTGCTCATCGTGTGTTGGTGTTTTGTTAACGTCTTGAA  Raphanus sativus cv Early Scarlet Globe
EY913636       --> TT-GCTAGTTAGTTGCTCATCGTGTGTTGGTGTTTTGTTAACGTCTTGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY914104       --> TT-GCTAGTTAGTTGCTCATCGTGTGTTGGTGTTTTGTTAACGTCTTGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY914114       --> TT-GCTAGTTAGTTGCTCATCGTGTGTTGGTGTTTTGTTAACGTCTTGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY938002       --> TT-GCTAGTTAGTTGCTCATCGTGTGTTGGTGTTTTGTTAACGTCTTGAA  Raphanus sativus cv Early Scarlet Globe
EY932040       --> TT-GCTAGTTAGCTGCTCATCGTGTGTTGGTGTTTTGTTAACGTCTTGAA  Raphanus sativus var. oleiformis
EX764223       --> TTTGCTAGTTAGTTGCTCATCGTGTGTTGGTGTTTTGTTAACG.......  Raphanus raphanistrum subsp. raphanistrum (NY)
FD534393       --> TTTGCTAGTTAGTTGCTCATCGTGTGTTGGTGTTTTGTTAACGTCTTGAA  Raphanus raphanistrum subsp. maritimus
FD947626       --> TT-GCTAGTTAGTTGCTCATCGTGTGTTGGTGTTTTGTTAACGTCTTGAA  Raphanus sativus cv Early Scarlet Globe
FY435967       --> TTTGCTAGTTAGTTGCTCATCGTGTGTTGGTGTTTTGTTAACGTCTTGAA  Raphanus sativus cv GSK3-1
EW732446       --> TTTGCTAGTTAGTTGCTCATCGTGTGTTGGTGTTTTGTTAACGTCTTGAA  Raphanus sativus cv Rat-Tail Radish #3870

               551    -    601
UN13990        --> CTGCTTTTCCCTTCCTTTATTAGTG-TT-GCCTTTTATTGGACATCTTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV546110       <-- CTGCTTTTCCGTTCCTTTATTAGTG-TTTGCCTTTTATTGGACATCTTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV571423       <-- CTGCTTTTCCCTTCCTTTATTAGTG-TT-GCCTTTTATTGGACATCTTCA  Raphanus raphanistrum subsp. landra
EY910222       <-- CTGCTTTTCCGTTCCTTTATTAGTG-TT-GCCTTTTATTGGACATCTTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW719404       <-- CTGCT--TCCCTTCCTTTATTAGTG-TT-GCCTTTTATTGGACATCTTCA  Raphanus sativus var. oleiformis
EW730081       <-- CTGCTTTTCCCTTCCTTTATTAGTG-TT-GCCTTTTATTGGACATCTTCA  Raphanus sativus cv Early Scarlet Globe
FD530342       <-- CTGCTTTTCCCTTCCTTTATTAGTG-TT-GCCTTTTATTGGACATCTTCA  Raphanus raphanistrum subsp. maritimus
EY934227       <-- CTGCTTTTCCCTTCCTTTATTAGTG-TT-GCCTTTTATTGGAC.......  Raphanus sativus cv Early Scarlet Globe
EY927854       <-- CTGCTTTTCCTTTCCTTTATTAGTG-TTTGCCTTT-ATTGGACATCTTCA  Raphanus sativus var. oleiformis
EW715707       --> CTGCTT--CCCTTCCTTTATTAGTG-TT-GCCTTTTATTGGACATCTTCA  Raphanus sativus var. oleiformis
EY930977       --> CTGCTTTTCCTTTCCTTTATTAGTG-TTTGCCTTT-ATTGGACATCTTCA  Raphanus sativus var. oleiformis
EV550915       --> CTGCTTTTCCGTTCCTTTATTAGTG-TTTGCCTTTTATTGGACATCTTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV566249       --> CTGCTTTTCCCTTCCTTTATTAGTG-TT-GCCTTTTATTGGACATCTTCA  Raphanus raphanistrum subsp. landra
EW725637       --> CTGCTTTTCCCTTCCTTTATTAGTG-TT-GCCTTTTATTGGACATCTTCA  Raphanus sativus cv Early Scarlet Globe
EY913636       --> CTGCTTTTCCGTTCCTTTATTAGTGGTT-GCCTTTTATTGGACATCTTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY914104       --> CTGCTTTTCCGTTCCTTTATTAGTG-TT-GCCTTTTATTGGACATCTTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY914114       --> CTGCTTTTCCGTTCCTTTATTAGTG-TT-GCCTTTTATTGGACATCTTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY938002       --> CTGCTTTTCCCTTCCTTTATTAGTG-TT-GCCTTTTATTGGACATCTTCA  Raphanus sativus cv Early Scarlet Globe
EY932040       --> CTGCTTTTCCTTTCCTTTATTAGTG-TTTGCCTTT-ATTGGACATCTTCA  Raphanus sativus var. oleiformis
EX764223       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD534393       --> CTGCTTTTCCCTTCCTTTATTAGTG-TT-GCCTTTTATTGGACATCT...  Raphanus raphanistrum subsp. maritimus
FD947626       --> CTGCTTTTCCCTTCCTTTATTAGTG-TT-GCCTTTTATTGGACATCT...  Raphanus sativus cv Early Scarlet Globe
FY435967       --> CTGCTTTTCCGTTCCTTTATTAGTG-TT-GCCTTTTATTGGACATCTTCA  Raphanus sativus cv GSK3-1
EW732446       --> CTGCTTTTCCGTTCCTTTATTAGTG-TT-GCCTTTTATTGGACATCTTCA  Raphanus sativus cv Rat-Tail Radish #3870

               601    -    651
UN13990        --> GGTGTACATGAGTTAATTTGAACTCTTCTGCTTCTCTGTTTAGCAATTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV546110       <-- GGTGTACATGAGTTAACTTGAACTCTTCT.....................
EV571423       <-- GGTGTATATGAGTTAATTTGAACTCTTCTGCTTCTCTGTTTAGCAATTCT
EY910222       <-- GGTGTACATGAGTTAATTTGAACTCTTCTGCTTCTCTGTTTAGCAATTCT
EW719404       <-- GGTGTACATGAGTTAATTTGAACTTTTTTGCTTCTCTGTTTAGCAATTCT
EW730081       <-- GGTGTACATGAGTTAATTTGAACTaaaat.....................
FD530342       <-- GGTGTACATGAGTTAATTTGAACTCTTCTGCTTCTCTGTTTAGCAATTCT
EY934227       <-- ..................................................
EY927854       <-- GGTGTACATGAGTTAATTTGAACTCTTCTGCTTCTCTGTTTAGCAATTCT
EW715707       --> GGTGTACATGAGTTAATTTGAACTCTTCTGCTTCTCTGTTTAGCAATTCT
EY930977       --> GGTGTACATGAGTTAATTTGAACTCTTCTGC...................
EV550915       --> GGTGTACATGAGTTAACTTGAACTCTTCT.....................
EV566249       --> GGTGTATATGAGTTAATTTGAACTCTTCTGCTTCTCTGTTTAGCAATTCT
EW725637       --> GGTGTACATGAGTTAATTTGAACTaaaat.....................
EY913636       --> GGTGTACATGAGTTAATTTGAACTCTTCTGCTTCTCTGTT..........
EY914104       --> GGTGTACATGAGTTAATTTGAACTCTTCTGCTTCTCTGTTTAGCAATTCT
EY914114       --> GGTGTACATGAGTTAATTTGAACTCTTCTGCTTCTCTGTTTAGCAATTCT
EY938002       --> GGTGTACATGAGTTAATTTGAACTCTTCTGCTTCTCTGTTTAGCt.....
EY932040       --> GGTGTACATGAGTTAATTTGAACTCTTCTGCTTCTCTGTTTAGCAATTCT
EX764223       --> ..................................................
FD534393       --> ..................................................
FD947626       --> ..................................................
FY435967       --> GGTGTACATGAGTTAATTTGAACTCTTCTGCTT.................
EW732446       --> GGTGTACATGAGTTAATTTGAACTCTTCTGCTTCTCTGTTTAGCg.....

               651    -    701
UN13990        --> TGTCTTTGCAT-ACTCTTGTGGTTTAGCTTCTTTCAAGTAAATCAGTTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV546110       <-- ..................................................
EV571423       <-- TGTCTTTGCAT-ACTCTTGTGGTTTAGCTTCTTTCAAGTAAATCAGTTTA
EY910222       <-- TGTCTTTGC.........................................
EW719404       <-- TGTCTTTGCAT-ACTCTTGTGGTTTAGCTTCTTTCAAGTAAATCAGTTTA
EW730081       <-- ..................................................
FD530342       <-- TGTCTTTGCAT-ACTCTTGTGGTTTAGCTTCTTTCAAGTAAATCAGTTTA
EY934227       <-- ..................................................
EY927854       <-- TGTCTTTGCATGCCTCTTGTGGTT..........................
EW715707       --> TGTCTTTGCAT-ACTCTTGTGGTTTAGCTTCTTTCAAGTAAATCAGTTTA
EY930977       --> ..................................................
EV550915       --> ..................................................
EV566249       --> TGTCTTTGCAT-ACTCTTGTGGTTTAGCTTCTTTCAAGTAAATCAGTTTA
EW725637       --> ..................................................
EY913636       --> ..................................................
EY914104       --> TGTCTTTGC.........................................
EY914114       --> TGTCTTTGCAaacaaaaaaaa.............................
EY938002       --> ..................................................
EY932040       --> TGTCTTTGCATGCCTCTTGTGGTT..........................
EX764223       --> ..................................................
FD534393       --> ..................................................
FD947626       --> ..................................................
FY435967       --> ..................................................
EW732446       --> ..................................................

               701    -    751
UN13990        --> ATTACCGGTGTTAAATAACCGAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~
EV546110       <-- ........................
EV571423       <-- Agc.....................
EY910222       <-- ........................
EW719404       <-- ATTACCGGTGTTAAATAACCGAGG
EW730081       <-- ........................
FD530342       <-- ATT.....................
EY934227       <-- ........................
EY927854       <-- ........................
EW715707       --> ATTACCGGTGTTAAATAACCGAGG
EY930977       --> ........................
EV550915       --> ........................
EV566249       --> Agc.....................
EW725637       --> ........................
EY913636       --> ........................
EY914104       --> ........................
EY914114       --> ........................
EY938002       --> ........................
EY932040       --> ........................
EX764223       --> ........................
FD534393       --> ........................
FD947626       --> ........................
FY435967       --> ........................
EW732446       --> ........................